+D GENES KO #

  KEGG Orthology (KO) - Microbacterium schleiferi

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:msf00010] D IT882_03235 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D IT882_06565 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D IT882_07095 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D IT882_04770 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D IT882_10680 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D IT882_10690 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D IT882_07065 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D IT882_07055 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D IT882_07060 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D IT882_12015 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D IT882_10875 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D IT882_07460 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D IT882_09120 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D IT882_14020 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D IT882_08195 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D IT882_07920 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D IT882_11910 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D IT882_06060 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_07915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_01320 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D IT882_05975 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D IT882_15850 alcohol dehydrogenase catalytic domain-containing protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D IT882_16040 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D IT882_16025 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D IT882_12275 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IT882_13940 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D IT882_00745 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D IT882_14135 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D IT882_08175 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D IT882_03295 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:msf00020] D IT882_10480 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D IT882_07835 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D IT882_03165 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D IT882_03985 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D IT882_06060 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_07915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_03095 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D IT882_03090 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D IT882_03475 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D IT882_03470 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D IT882_03485 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D IT882_03480 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D IT882_10725 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D IT882_12335 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D IT882_06085 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D IT882_03295 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D IT882_08195 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D IT882_07920 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D IT882_11910 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:msf00030] D IT882_06565 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D IT882_07095 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D IT882_14955 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D IT882_07080 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D IT882_10955 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D IT882_12525 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D IT882_07525 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D IT882_14775 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D IT882_14780 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D IT882_07100 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D IT882_08760 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D IT882_04755 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D IT882_15205 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D IT882_14135 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D IT882_10985 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D IT882_08660 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D IT882_08655 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D IT882_10690 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D IT882_10680 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D IT882_04770 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:msf00040] D IT882_02410 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D IT882_11410 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D IT882_11160 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D IT882_13955 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D IT882_07525 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D IT882_13945 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D IT882_01590 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D IT882_01585 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D IT882_14350 FAD-binding protein K00594 xyoA; alditol oxidase [EC:1.1.3.41] D IT882_01500 rhaI; L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D IT882_01490 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D IT882_14285 class II aldolase/adducin family protein K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D IT882_14770 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] C 00051 Fructose and mannose metabolism [PATH:msf00051] D IT882_12910 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D IT882_03490 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D IT882_01500 rhaI; L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D IT882_01490 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D IT882_14285 class II aldolase/adducin family protein K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D IT882_04770 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D IT882_10680 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D IT882_03565 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D IT882_14770 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D IT882_14350 FAD-binding protein K00594 xyoA; alditol oxidase [EC:1.1.3.41] D IT882_01585 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D IT882_10690 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D IT882_07065 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D IT882_08760 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D IT882_04890 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D IT882_03560 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D IT882_03555 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] C 00052 Galactose metabolism [PATH:msf00052] D IT882_13940 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D IT882_00745 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D IT882_14215 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D IT882_14210 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D IT882_03690 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D IT882_14200 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D IT882_11410 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D IT882_14135 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D IT882_03235 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D IT882_14195 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D IT882_03745 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D IT882_04770 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D IT882_08690 mandelate racemase/muconate lactonizing enzyme family protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] C 00053 Ascorbate and aldarate metabolism [PATH:msf00053] D IT882_02410 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D IT882_11160 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D IT882_13955 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] C 00500 Starch and sucrose metabolism [PATH:msf00500] D IT882_04670 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D IT882_11410 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D IT882_13735 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D IT882_00645 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D IT882_07215 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D IT882_05805 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D IT882_08985 glgX; glycogen debranching protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D IT882_12925 alpha-amylase family protein K01176 AMY; alpha-amylase [EC:3.2.1.1] D IT882_04650 treS; maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D IT882_04645 phosphotransferase K16146 pep2; maltokinase [EC:2.7.1.175] D IT882_07220 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D IT882_01600 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D IT882_09730 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D IT882_09725 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D IT882_14135 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D IT882_03235 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D IT882_06565 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D IT882_07095 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D IT882_12910 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:msf00520] D IT882_03085 glycosyl hydrolase family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D IT882_06560 glycosyl hydrolase K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D IT882_08420 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D IT882_03265 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D IT882_03260 amidohydrolase family protein K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D IT882_03240 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D IT882_12910 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D IT882_02685 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D IT882_02655 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D IT882_12810 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D IT882_01735 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D IT882_14190 alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D IT882_03235 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D IT882_08175 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D IT882_14135 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D IT882_11410 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D IT882_02410 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D IT882_14215 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D IT882_14210 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D IT882_03690 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D IT882_14200 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D IT882_03745 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D IT882_06565 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D IT882_07095 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D IT882_03490 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D IT882_07215 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:msf00620] D IT882_12275 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IT882_08195 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D IT882_07920 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D IT882_11910 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D IT882_06060 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_07915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_04610 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D IT882_05975 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D IT882_15850 alcohol dehydrogenase catalytic domain-containing protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D IT882_16040 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D IT882_12380 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D IT882_12385 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D IT882_07460 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D IT882_09120 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D IT882_03585 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D IT882_16025 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D IT882_01320 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D IT882_06085 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D IT882_12335 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D IT882_10725 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D IT882_10920 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D IT882_03295 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D IT882_14020 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D IT882_12770 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D IT882_08305 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:msf00630] D IT882_12775 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D IT882_12275 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IT882_12770 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D IT882_10480 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D IT882_07835 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D IT882_03585 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D IT882_03620 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D IT882_03250 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D IT882_00180 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D IT882_08165 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D IT882_03270 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D IT882_10565 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D IT882_06060 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_07915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_10560 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D IT882_14280 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D IT882_08660 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D IT882_03985 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D IT882_14680 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D IT882_14805 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:msf00640] D IT882_12275 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IT882_12380 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D IT882_12385 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D IT882_15320 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D IT882_15315 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D IT882_11915 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D IT882_15310 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D IT882_06060 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_07915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_04610 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D IT882_00810 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D IT882_14415 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D IT882_03585 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D IT882_12755 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D IT882_03620 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D IT882_03090 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D IT882_03095 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D IT882_01380 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D IT882_14435 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D IT882_14430 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D IT882_01320 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:msf00650] D IT882_15855 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D IT882_14415 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D IT882_15860 enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D IT882_05975 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D IT882_02730 PHB depolymerase family esterase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D IT882_03475 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D IT882_03470 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D IT882_03485 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D IT882_03480 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D IT882_08285 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D IT882_12755 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D IT882_14685 NADP-dependent succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D IT882_15865 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D IT882_04610 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D IT882_09745 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D IT882_09765 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D IT882_09710 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D IT882_14290 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D IT882_11940 alcohol dehydrogenase catalytic domain-containing protein K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] C 00660 C5-Branched dibasic acid metabolism [PATH:msf00660] D IT882_09710 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D IT882_14290 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D IT882_03090 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D IT882_03095 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D IT882_15455 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D IT882_09310 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D IT882_09305 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D IT882_09675 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:msf00562] D IT882_12895 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D IT882_02500 sugar phosphate isomerase/epimerase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D IT882_01380 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D IT882_07065 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:msf00190] D IT882_10855 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D IT882_03475 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D IT882_03470 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D IT882_03485 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D IT882_03480 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D IT882_06365 Rieske 2Fe-2S domain-containing protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D IT882_06360 cytochrome bc complex cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D IT882_06370 c-type cytochrome K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D IT882_07110 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D IT882_06345 cytochrome c oxidase subunit 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D IT882_06375 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D IT882_06340 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D IT882_06335 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D IT882_07120 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D IT882_12580 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D IT882_12585 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D IT882_04525 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D IT882_04535 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D IT882_04530 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D IT882_04520 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D IT882_04505 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D IT882_04515 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D IT882_04510 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D IT882_01015 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D IT882_12050 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D IT882_11885 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:msf00680] D IT882_03270 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D IT882_10875 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D IT882_10920 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D IT882_10690 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D IT882_10680 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D IT882_04770 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D IT882_02440 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1] D IT882_12380 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D IT882_12385 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D IT882_12275 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IT882_14020 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D IT882_12015 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D IT882_09690 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D IT882_11790 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D IT882_07210 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D IT882_00525 sulfopyruvate decarboxylase K06034 comD; sulfopyruvate decarboxylase subunit alpha [EC:4.1.1.79] D IT882_00520 thiamine pyrophosphate-binding protein K13039 comE; sulfopyruvate decarboxylase subunit beta [EC:4.1.1.79] D IT882_14560 cofG; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase CofG K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32] D IT882_14575 cofC; 2-phospho-L-lactate guanylyltransferase K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105] D IT882_16035 cofD; 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] D IT882_14380 cofE; coenzyme F420-0:L-glutamate ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] C 00910 Nitrogen metabolism [PATH:msf00910] D IT882_08165 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D IT882_07470 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D IT882_06460 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D IT882_10720 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:msf00920] D IT882_11360 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D IT882_11365 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D IT882_11355 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D IT882_14005 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D IT882_09890 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D IT882_04480 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D IT882_04485 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D IT882_04025 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D IT882_08440 cupin domain-containing protein K16953 dddL; dimethylpropiothetin dethiomethylase [EC:4.4.1.3] D IT882_12780 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:msf00061] D IT882_03585 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D IT882_08215 acyl carrier protein K02078 acpP; acyl carrier protein D IT882_08205 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D IT882_08210 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D IT882_06200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_07385 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_08680 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_11500 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_06100 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D IT882_08925 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:msf00071] D IT882_07820 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D IT882_14420 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D IT882_14415 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D IT882_00810 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D IT882_00760 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D IT882_13905 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D IT882_15825 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D IT882_06100 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D IT882_08925 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D IT882_15580 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D IT882_15585 hypothetical protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D IT882_05975 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D IT882_15850 alcohol dehydrogenase catalytic domain-containing protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D IT882_16040 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:msf00121] D IT882_10130 linear amide C-N hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:msf00561] D IT882_14280 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D IT882_03420 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D IT882_05215 HAD-IIA family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D IT882_04590 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D IT882_07150 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D IT882_14095 NAD(+)/NADH kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D IT882_14995 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00564 Glycerophospholipid metabolism [PATH:msf00564] D IT882_09290 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D IT882_03415 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D IT882_04590 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D IT882_07150 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D IT882_14095 NAD(+)/NADH kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D IT882_02900 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D IT882_09030 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D IT882_04995 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D IT882_01090 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:msf00600] D IT882_03265 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:msf00592] D IT882_00810 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D IT882_07820 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D IT882_14420 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:msf01040] D IT882_00810 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:msf00230] D IT882_14135 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D IT882_10985 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D IT882_00695 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D IT882_00675 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D IT882_03125 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D IT882_00330 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D IT882_00625 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D IT882_00620 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D IT882_00690 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D IT882_03635 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D IT882_03645 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D IT882_15355 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D IT882_03130 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D IT882_00410 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D IT882_02055 5'-nucleotidase C-terminal domain-containing protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D IT882_03575 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D IT882_01025 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D IT882_02870 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D IT882_10240 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D IT882_02885 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D IT882_05800 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D IT882_03990 GuaB1 family IMP dehydrogenase-related protein K26110 guaB1; GMP reductase [EC:1.7.1.7] D IT882_07555 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D IT882_11280 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D IT882_11275 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D IT882_05340 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D IT882_08270 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D IT882_02660 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D IT882_01595 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D IT882_00260 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D IT882_03525 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D IT882_04180 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D IT882_01220 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D IT882_01280 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D IT882_00485 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D IT882_02030 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D IT882_04785 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D IT882_07740 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D IT882_00415 hpxO; FAD-dependent urate hydroxylase HpxO K16839 hpxO; FAD-dependent urate hydroxylase [EC:1.14.13.113] D IT882_00420 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D IT882_00425 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D IT882_00430 allB; allantoinase AllB K01466 allB; allantoinase [EC:3.5.2.5] D IT882_00450 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] C 00240 Pyrimidine metabolism [PATH:msf00240] D IT882_07565 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D IT882_07570 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D IT882_07585 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D IT882_07580 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D IT882_06295 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D IT882_14880 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D IT882_07560 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D IT882_09040 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D IT882_03590 maf; septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D IT882_05240 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D IT882_05320 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D IT882_04730 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D IT882_02055 5'-nucleotidase C-terminal domain-containing protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D IT882_00605 nucleoside phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D IT882_13685 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D IT882_07590 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D IT882_03515 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D IT882_05340 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D IT882_15130 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D IT882_11280 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D IT882_11275 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D IT882_12240 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D IT882_07850 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D IT882_12330 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D IT882_04960 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D IT882_01780 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D IT882_01785 acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:msf00250] D IT882_12805 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D IT882_10585 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D IT882_03915 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D IT882_11490 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D IT882_04790 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D IT882_05170 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D IT882_00260 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D IT882_15355 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D IT882_07585 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D IT882_08285 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D IT882_12755 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D IT882_14685 NADP-dependent succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D IT882_15865 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D IT882_07470 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D IT882_14365 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D IT882_08165 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D IT882_07565 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D IT882_07570 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D IT882_00620 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D IT882_02685 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D IT882_00695 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:msf00260] D IT882_12350 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D IT882_12340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D IT882_04190 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D IT882_04200 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D IT882_04195 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D IT882_03270 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D IT882_14280 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D IT882_12015 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D IT882_09690 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D IT882_11790 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D IT882_07210 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D IT882_10565 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D IT882_06060 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_07915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_10560 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D IT882_00515 GMC family oxidoreductase N-terminal domain-containing protein K00108 betA; choline dehydrogenase [EC:1.1.99.1] D IT882_10775 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D IT882_07480 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:msf00270] D IT882_04480 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D IT882_04485 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D IT882_01475 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D IT882_13040 hypothetical protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D IT882_13705 nucleoside phosphorylase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D IT882_09450 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D IT882_11965 amidohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D IT882_01260 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D IT882_05725 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D IT882_04655 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D IT882_12350 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D IT882_12340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D IT882_04190 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D IT882_04025 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D IT882_04030 bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D IT882_09670 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D IT882_12805 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D IT882_09890 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D IT882_01320 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D IT882_09690 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D IT882_11790 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:msf00280] D IT882_09670 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D IT882_15320 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D IT882_15315 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D IT882_11915 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D IT882_15310 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D IT882_06060 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_07915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_00760 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D IT882_14415 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D IT882_07820 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D IT882_14420 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D IT882_03585 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D IT882_03620 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D IT882_06630 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D IT882_01380 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D IT882_12755 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D IT882_09745 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:msf00290] D IT882_10775 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D IT882_09310 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D IT882_09305 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D IT882_09675 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D IT882_09710 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D IT882_09705 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D IT882_09670 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D IT882_03915 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D IT882_08305 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:msf00300] D IT882_04190 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D IT882_12350 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D IT882_12340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D IT882_04975 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D IT882_04930 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D IT882_05155 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D IT882_05035 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D IT882_04185 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D IT882_04620 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D IT882_06155 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:msf00310] D IT882_06060 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_07915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_13905 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D IT882_15825 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D IT882_14415 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D IT882_12755 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D IT882_14685 NADP-dependent succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D IT882_15865 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:msf00220] D IT882_05160 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D IT882_05170 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D IT882_04100 arginase family protein K01476 rocF; arginase [EC:3.5.3.1] D IT882_14330 N-dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27] D IT882_00620 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D IT882_08165 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D IT882_12805 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D IT882_03915 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D IT882_01120 amino-acid N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D IT882_05145 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D IT882_05140 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D IT882_05155 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:msf00330] D IT882_01255 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D IT882_11510 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D IT882_14330 N-dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27] D IT882_04100 arginase family protein K01476 rocF; arginase [EC:3.5.3.1] D IT882_14365 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D IT882_08475 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D IT882_08470 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D IT882_12805 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:msf00340] D IT882_07515 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D IT882_07520 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D IT882_07505 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D IT882_05085 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D IT882_05080 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D IT882_07510 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D IT882_05075 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D IT882_05070 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D IT882_15325 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D IT882_09830 histidinol phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D IT882_06285 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:msf00350] D IT882_12805 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D IT882_05070 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D IT882_15325 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D IT882_00535 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D IT882_05975 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D IT882_15850 alcohol dehydrogenase catalytic domain-containing protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D IT882_16040 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D IT882_15435 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D IT882_14685 NADP-dependent succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D IT882_15865 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:msf00360] D IT882_00535 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D IT882_14500 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D IT882_14415 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D IT882_15855 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D IT882_12805 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D IT882_05070 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D IT882_15325 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D IT882_03830 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D IT882_11510 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D IT882_07135 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D IT882_15580 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D IT882_15585 hypothetical protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:msf00380] D IT882_06060 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_07915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_13905 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D IT882_15825 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D IT882_14415 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D IT882_11510 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D IT882_03830 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:msf00400] D IT882_06110 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D IT882_07620 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D IT882_07625 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D IT882_03965 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D IT882_06380 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D IT882_05085 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D IT882_07490 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D IT882_07480 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D IT882_00285 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D IT882_05315 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D IT882_14130 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D IT882_12805 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D IT882_05070 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D IT882_15325 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:msf00410] D IT882_08285 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D IT882_12755 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D IT882_01780 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D IT882_01785 acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D IT882_14415 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D IT882_00810 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D IT882_01380 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:msf00430] D IT882_08285 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D IT882_11490 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D IT882_12385 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D IT882_12380 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:msf00450] D IT882_01475 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D IT882_00390 sufS; SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D IT882_00585 molybdopterin-dependent oxidoreductase K12528 xdhD; putative selenate reductase molybdopterin-binding subunit D IT882_11135 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:msf00460] D IT882_13735 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D IT882_00645 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D IT882_03270 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:msf00470] D IT882_02695 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D IT882_06310 hypothetical protein K01775 alr; alanine racemase [EC:5.1.1.1] D IT882_06315 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D IT882_00620 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D IT882_10250 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D IT882_06165 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D IT882_05035 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D IT882_04185 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:msf00480] D IT882_01850 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D IT882_09155 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D IT882_07910 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D IT882_08780 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D IT882_03165 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D IT882_10955 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D IT882_12525 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D IT882_14955 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D IT882_05920 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D IT882_08280 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:msf00515] D IT882_11175 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:msf00514] D IT882_11175 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:msf00511] D IT882_03265 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D IT882_03180 glycoside hydrolase family 2 protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:msf00541] D IT882_11410 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D IT882_03690 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D IT882_14200 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D IT882_03745 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D IT882_02410 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D IT882_03675 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D IT882_03665 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D IT882_03490 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00550 Peptidoglycan biosynthesis [PATH:msf00550] D IT882_12810 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D IT882_06225 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D IT882_06165 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D IT882_04620 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D IT882_06155 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D IT882_08290 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D IT882_07310 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D IT882_06175 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D IT882_06150 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D IT882_07405 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D IT882_14535 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D IT882_13975 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D IT882_08425 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:msf00552] D IT882_07310 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D IT882_03650 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D IT882_14995 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:msf00543] D IT882_11625 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF D IT882_02145 glycosyltransferase family 2 protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D IT882_04480 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:msf00730] D IT882_08980 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IT882_10595 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IT882_02030 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:msf00740] D IT882_03405 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D IT882_14085 HAD family phosphatase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104] D IT882_03390 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D IT882_04750 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D IT882_14005 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] C 00750 Vitamin B6 metabolism [PATH:msf00750] D IT882_07735 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D IT882_11790 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D IT882_04195 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D IT882_07720 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:msf00760] D IT882_10585 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D IT882_10580 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D IT882_10590 carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D IT882_03575 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D IT882_02055 5'-nucleotidase C-terminal domain-containing protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D IT882_08460 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D IT882_10360 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D IT882_13695 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D IT882_12180 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D IT882_05230 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D IT882_14885 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D IT882_14890 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D IT882_14685 NADP-dependent succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D IT882_15865 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:msf00770] D IT882_09710 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D IT882_09705 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D IT882_11930 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D IT882_02670 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D IT882_02350 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D IT882_09260 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D IT882_07000 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D IT882_02690 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D IT882_12060 chemotaxis protein CheY K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D IT882_09670 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D IT882_01780 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D IT882_01785 acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] C 00780 Biotin metabolism [PATH:msf00780] D IT882_06200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_07385 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_08680 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_11500 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_03625 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:msf00785] D IT882_09185 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D IT882_14250 lipoate--protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D IT882_06060 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_07915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_08195 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D IT882_07920 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D IT882_11910 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D IT882_03985 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D IT882_15320 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D IT882_15315 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D IT882_11915 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D IT882_15310 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D IT882_10565 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D IT882_10560 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:msf00790] D IT882_01035 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D IT882_01045 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D IT882_01050 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D IT882_01040 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D IT882_08520 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D IT882_00125 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D IT882_08400 anthranilate synthase component I family protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D IT882_02830 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D IT882_02815 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D IT882_02835 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D IT882_02810 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:msf00670] D IT882_03275 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D IT882_03270 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D IT882_03125 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D IT882_03130 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D IT882_07535 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D IT882_10565 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D IT882_04960 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D IT882_14680 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D IT882_14805 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D IT882_14800 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D IT882_11415 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:msf00860] D IT882_11120 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D IT882_11080 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D IT882_11085 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D IT882_11095 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D IT882_11090 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D IT882_11115 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D IT882_11110 FAD-dependent oxidoreductase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D IT882_14600 FAD-dependent oxidoreductase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D IT882_11100 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D IT882_07110 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D IT882_07120 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D IT882_15230 biliverdin-producing heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20] D IT882_15415 TIGR03618 family F420-dependent PPOX class oxidoreductase K23825 K23825; F420H(2)-dependent biliverdin reductase [EC:1.3.98.-] D IT882_01330 ferritin K22336 bfrB; bacterioferritin B [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:msf00130] D IT882_13480 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D IT882_13490 chorismate-binding protein K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D IT882_13505 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D IT882_13545 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D IT882_14655 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D IT882_13530 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D IT882_13520 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D IT882_06695 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D IT882_12150 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:msf00900] D IT882_11985 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D IT882_11060 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D IT882_04640 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D IT882_10700 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D IT882_10300 idi; isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D IT882_10305 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D IT882_06125 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D IT882_10750 isoprenyl transferase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D IT882_08290 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:msf00906] D IT882_10310 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:msf00903] D IT882_15885 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D IT882_01165 mycofactocin-coupled SDR family oxidoreductase K12466 E1.1.1.275; (+)-trans-carveol dehydrogenase [EC:1.1.1.275] C 00907 Pinene, camphor and geraniol degradation [PATH:msf00907] D IT882_14415 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D IT882_07820 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D IT882_14420 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D IT882_14775 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D IT882_14780 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:msf00523] D IT882_03675 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D IT882_03665 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D IT882_13490 chorismate-binding protein K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D IT882_03665 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:msf00946] D IT882_13735 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D IT882_00645 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:msf00311] D IT882_03210 acetylxylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41] D IT882_00230 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:msf00332] D IT882_08475 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D IT882_08470 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:msf00261] D IT882_12350 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D IT882_12340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D IT882_04975 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D IT882_04930 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:msf00521] D IT882_03235 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D IT882_14135 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D IT882_12895 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D IT882_03675 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D IT882_03665 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D IT882_03235 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:msf00525] D IT882_03675 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D IT882_03665 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:msf00401] D IT882_05315 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D IT882_12805 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D IT882_05070 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D IT882_15325 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D IT882_04630 chorismate-binding protein K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86] C 00333 Prodigiosin biosynthesis D IT882_08205 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D IT882_06200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_07385 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_08680 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_11500 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D IT882_08215 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D IT882_13735 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D IT882_00645 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:msf00362] D IT882_14665 alpha/beta hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D IT882_07820 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D IT882_14420 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D IT882_15445 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D IT882_15440 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D IT882_15435 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D IT882_15460 amidohydrolase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83] D IT882_15455 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D IT882_14700 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D IT882_13905 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D IT882_15825 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D IT882_14415 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D IT882_15855 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] C 00627 Aminobenzoate degradation [PATH:msf00627] D IT882_11510 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D IT882_14740 aldehyde dehydrogenase family protein K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D IT882_03335 aminomethyl transferase family protein K15066 ligM; vanillate/3-O-methylgallate O-demethylase [EC:2.1.1.341] D IT882_03345 aminomethyl transferase family protein K15066 ligM; vanillate/3-O-methylgallate O-demethylase [EC:2.1.1.341] D IT882_03355 aminomethyl transferase family protein K15066 ligM; vanillate/3-O-methylgallate O-demethylase [EC:2.1.1.341] D IT882_14810 aminomethyl transferase family protein K15066 ligM; vanillate/3-O-methylgallate O-demethylase [EC:2.1.1.341] D IT882_15445 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D IT882_15440 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D IT882_15435 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D IT882_14415 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:msf00625] D IT882_15850 alcohol dehydrogenase catalytic domain-containing protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D IT882_16040 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D IT882_05975 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation [PATH:msf00623] D IT882_14740 aldehyde dehydrogenase family protein K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] C 00622 Xylene degradation [PATH:msf00622] D IT882_14740 aldehyde dehydrogenase family protein K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D IT882_07820 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D IT882_14420 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:msf00643] D IT882_00535 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D IT882_11510 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation [PATH:msf00791] D IT882_09430 ring-opening amidohydrolase K03383 atzD; cyanuric acid amidohydrolase [EC:3.5.2.15] D IT882_09435 cysteine hydrolase K23359 biuH; biuret amidohydrolase [EC:3.5.1.84] C 00930 Caprolactam degradation [PATH:msf00930] D IT882_15835 glucose 1-dehydrogenase K17754 cpnA; cyclopentanol dehydrogenase [EC:1.1.1.163] D IT882_15880 NAD(P)/FAD-dependent oxidoreductase K03379 chnB; cyclohexanone monooxygenase [EC:1.14.13.22] D IT882_15885 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D IT882_14415 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:msf00626] D IT882_15850 alcohol dehydrogenase catalytic domain-containing protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D IT882_16040 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D IT882_05975 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D IT882_15445 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D IT882_15440 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] C 00365 Furfural degradation C 00984 Steroid degradation [PATH:msf00984] D IT882_05835 FAD-binding protein K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D IT882_15740 acyl-CoA dehydrogenase family protein K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:msf03020] D IT882_02085 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D IT882_07550 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:msf03010] D IT882_06905 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D IT882_01960 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D IT882_07660 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D IT882_02010 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D IT882_16005 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D IT882_01905 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D IT882_01995 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D IT882_01925 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D IT882_02080 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D IT882_01900 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D IT882_02075 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D IT882_15255 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D IT882_04845 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D IT882_09140 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D IT882_01975 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D IT882_15995 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D IT882_01950 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D IT882_08375 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D IT882_12710 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D IT882_01945 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D IT882_01930 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D IT882_01935 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D IT882_01990 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D IT882_02000 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D IT882_12670 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D IT882_15990 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D IT882_12675 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D IT882_12715 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D IT882_02645 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D IT882_01980 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D IT882_02020 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D IT882_01965 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D IT882_02090 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D IT882_02005 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D IT882_09105 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D IT882_05110 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D IT882_08490 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D IT882_01955 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D IT882_01940 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D IT882_01985 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D IT882_10950 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D IT882_08485 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D IT882_15265 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D IT882_01970 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D IT882_02015 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D IT882_07230 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D IT882_09250 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D IT882_15260 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D IT882_16115 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D IT882_05105 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D IT882_02070 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D IT882_05190 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D IT882_05195 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D IT882_05200 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:msf00970] D IT882_08445 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IT882_00050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IT882_11395 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IT882_04145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IT882_11720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IT882_13925 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IT882_08860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IT882_08255 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D IT882_00995 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D IT882_07770 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D IT882_09640 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D IT882_13045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D IT882_10995 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D IT882_09515 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IT882_01000 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IT882_15135 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IT882_07775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IT882_08625 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IT882_08850 tRNA-His K14226 tRNA-His; tRNA His D IT882_00045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D IT882_00165 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IT882_07300 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IT882_07450 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IT882_10850 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IT882_10210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IT882_09825 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D IT882_12135 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D IT882_10290 tRNA-Met K14230 tRNA-Met; tRNA Met D IT882_08240 tRNA-Ile K14230 tRNA-Met; tRNA Met D IT882_12875 tRNA-Met K14230 tRNA-Met; tRNA Met D IT882_00990 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D IT882_05375 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IT882_08620 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IT882_12310 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IT882_01335 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IT882_14065 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IT882_14080 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IT882_12410 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IT882_12880 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IT882_11875 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IT882_12225 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IT882_12730 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D IT882_12905 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D IT882_07765 tRNA-Val K14237 tRNA-Val; tRNA Val D IT882_07780 tRNA-Val K14237 tRNA-Val; tRNA Val D IT882_08190 tRNA-Val K14237 tRNA-Val; tRNA Val D IT882_08905 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D IT882_08900 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D IT882_07650 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D IT882_14625 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D IT882_07745 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D IT882_14090 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D IT882_11135 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D IT882_07535 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D IT882_08545 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D IT882_08395 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D IT882_01075 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D IT882_04155 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IT882_04675 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D IT882_10905 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D IT882_05120 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D IT882_05125 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D IT882_05185 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D IT882_03445 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:msf03060] D IT882_02025 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D IT882_12725 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D IT882_07070 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D IT882_07690 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D IT882_07685 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D IT882_07695 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D IT882_14360 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D IT882_16100 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D IT882_03910 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D IT882_15530 hypothetical protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D IT882_09175 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D IT882_12390 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D IT882_09200 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D IT882_07345 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D IT882_10445 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D IT882_07350 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D IT882_09100 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D IT882_05605 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D IT882_06260 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D IT882_08105 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:msf04122] D IT882_08980 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IT882_10595 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IT882_09890 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D IT882_08975 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D IT882_02835 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D IT882_02830 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D IT882_02825 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein D IT882_00065 hypothetical protein K03636 moaD; sulfur-carrier protein D IT882_15960 ThiF family adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D IT882_02805 ThiF family adenylyltransferase K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D IT882_02815 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] C 03050 Proteasome C 03018 RNA degradation [PATH:msf03018] D IT882_08500 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D IT882_10875 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D IT882_05760 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D IT882_00795 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D IT882_04455 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D IT882_15090 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D IT882_11840 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D IT882_12050 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D IT882_11885 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] B B 09124 Replication and repair C 03030 DNA replication [PATH:msf03030] D IT882_06780 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IT882_10665 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IT882_06280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D IT882_12365 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D IT882_12235 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D IT882_08380 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D IT882_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D IT882_15975 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D IT882_08265 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D IT882_05395 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_08120 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_08830 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_13010 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_16000 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_06590 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D IT882_09095 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D IT882_07435 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D IT882_08970 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:msf03410] D IT882_04050 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D IT882_04725 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D IT882_15270 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D IT882_03425 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D IT882_01640 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D IT882_08755 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D IT882_03140 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D IT882_00815 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D IT882_03450 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D IT882_14900 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D IT882_07435 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D IT882_08970 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:msf03420] D IT882_10940 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D IT882_07010 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D IT882_07035 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D IT882_10355 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D IT882_10375 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D IT882_07435 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D IT882_08970 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:msf03430] D IT882_10355 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D IT882_10375 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D IT882_10705 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D IT882_10710 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D IT882_05395 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_08120 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_08830 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_13010 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_16000 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_06280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D IT882_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D IT882_12365 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D IT882_08380 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D IT882_12235 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D IT882_06780 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IT882_10665 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IT882_08970 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D IT882_04275 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:msf03440] D IT882_05395 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_08120 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_08830 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_13010 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_16000 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_12360 recR; recombination protein RecR K06187 recR; recombination protein RecR D IT882_05015 recA; recombinase RecA K03553 recA; recombination protein RecA D IT882_07435 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D IT882_07705 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D IT882_07700 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D IT882_07710 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D IT882_09265 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D IT882_09945 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D IT882_06280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D IT882_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D IT882_12365 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D IT882_08380 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D IT882_12235 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D IT882_06780 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IT882_10665 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] C 03450 Non-homologous end-joining [PATH:msf03450] D IT882_10225 Ku protein K10979 ku; DNA end-binding protein Ku D IT882_10230 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:msf03250] D IT882_00100 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:msf02010] D IT882_11360 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D IT882_11365 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D IT882_11355 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D IT882_12600 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D IT882_15425 substrate-binding domain-containing protein K02020 modA; molybdate transport system substrate-binding protein D IT882_12595 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D IT882_12590 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D IT882_05855 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D IT882_05840 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D IT882_05845 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D IT882_05850 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D IT882_00300 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D IT882_00295 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D IT882_11035 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D IT882_11040 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein D IT882_11045 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D IT882_11050 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D IT882_11895 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D IT882_12940 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D IT882_12935 ABC transporter permease subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D IT882_12930 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D IT882_13755 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D IT882_01545 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D IT882_03195 carbohydrate ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D IT882_03190 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D IT882_13750 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D IT882_01540 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D IT882_03185 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D IT882_13745 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D IT882_01535 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D IT882_12650 carbohydrate ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein D IT882_12645 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein D IT882_12640 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein D IT882_00630 carbohydrate ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein D IT882_00635 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein D IT882_00640 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein D IT882_03220 extracellular solute-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein D IT882_03230 carbohydrate ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein D IT882_11155 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D IT882_11145 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D IT882_11150 sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D IT882_03495 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D IT882_01230 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D IT882_01215 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D IT882_03510 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D IT882_01210 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D IT882_03500 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D IT882_01225 ATP-binding cassette domain-containing protein K23537 nupA; general nucleoside transport system ATP-binding protein D IT882_02495 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D IT882_10200 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D IT882_14755 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D IT882_02480 ABC transporter permease K10440 rbsC; ribose transport system permease protein D IT882_10190 ABC transporter permease K10440 rbsC; ribose transport system permease protein D IT882_14760 ABC transporter permease K10440 rbsC; ribose transport system permease protein D IT882_02485 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D IT882_14765 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D IT882_10195 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D IT882_14155 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D IT882_14140 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D IT882_14145 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D IT882_14160 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D IT882_12075 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D IT882_12080 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D IT882_12085 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D IT882_12090 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D IT882_13840 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D IT882_13825 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D IT882_13830 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D IT882_13835 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D IT882_02760 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IT882_03310 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IT882_09800 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IT882_03320 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D IT882_09785 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D IT882_02780 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D IT882_03315 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D IT882_03330 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D IT882_09795 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D IT882_03325 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D IT882_09790 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D IT882_02770 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D IT882_10535 ABC transporter permease K13890 gsiC; glutathione transport system permease protein D IT882_10530 ABC transporter permease K13891 gsiD; glutathione transport system permease protein D IT882_05880 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D IT882_05885 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D IT882_05890 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein D IT882_05895 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D IT882_07170 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D IT882_14520 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D IT882_00765 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D IT882_03370 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein D IT882_03375 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein D IT882_03365 ATP-binding cassette domain-containing protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein D IT882_08585 ABC transporter permease K09813 hrtB; hemin transport system permease protein D IT882_08590 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D IT882_10065 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D IT882_04555 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D IT882_04560 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D IT882_12615 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D IT882_12610 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:msf02060] D IT882_03550 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D IT882_03560 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D IT882_03555 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D IT882_04890 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 03070 Bacterial secretion system [PATH:msf03070] D IT882_07690 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D IT882_07685 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D IT882_12725 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D IT882_07070 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D IT882_02025 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D IT882_07695 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D IT882_14360 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D IT882_16100 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D IT882_03910 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D IT882_15530 hypothetical protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D IT882_09200 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D IT882_09175 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D IT882_07345 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D IT882_10445 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D IT882_07350 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D IT882_05400 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D IT882_08095 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:msf02020] D IT882_02910 HAMP domain-containing histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D IT882_01570 MASE1 domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D IT882_12005 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D IT882_12000 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3 D IT882_12075 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D IT882_07120 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D IT882_10280 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D IT882_03870 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D IT882_03865 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA D IT882_00175 DUF2156 domain-containing protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D IT882_08425 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D IT882_02630 helix-turn-helix transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D IT882_06015 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D IT882_06025 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR D IT882_10175 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D IT882_12270 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D IT882_10170 type II secretion system F family protein K12510 tadB; tight adherence protein B D IT882_12265 type II secretion system F family protein K12510 tadB; tight adherence protein B D IT882_10165 type II secretion system F family protein K12511 tadC; tight adherence protein C D IT882_08165 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D IT882_12580 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D IT882_12585 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D IT882_15350 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D IT882_02575 low molecular weight phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D IT882_04100 arginase family protein K01476 rocF; arginase [EC:3.5.3.1] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:msf02024] D IT882_03750 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D IT882_06110 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D IT882_04630 chorismate-binding protein K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86] D IT882_08285 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D IT882_02760 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IT882_03310 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IT882_09800 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IT882_03320 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D IT882_09785 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D IT882_02780 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D IT882_03315 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D IT882_03330 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D IT882_09795 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D IT882_03325 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D IT882_09790 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D IT882_02770 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D IT882_05825 N-acyl homoserine lactonase family protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81] D IT882_02235 tandem-95 repeat protein K20276 bapA; large repetitive protein D IT882_02615 hypothetical protein K20276 bapA; large repetitive protein D IT882_06100 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D IT882_08925 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D IT882_03405 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D IT882_03005 LysR family transcriptional regulator K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D IT882_04080 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D IT882_03015 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D IT882_03020 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D IT882_04065 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D IT882_10520 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D IT882_14360 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D IT882_16100 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D IT882_12725 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D IT882_07070 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D IT882_02025 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D IT882_07695 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D IT882_03910 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D IT882_15530 hypothetical protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D IT882_09200 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D IT882_09175 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D IT882_02495 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D IT882_10200 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D IT882_14755 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein C 02040 Flagellar assembly D IT882_07900 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D IT882_10875 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:msf01501] D IT882_08420 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D IT882_06150 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:msf01502] D IT882_02695 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D IT882_06310 hypothetical protein K01775 alr; alanine racemase [EC:5.1.1.1] D IT882_06315 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D IT882_06155 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D IT882_06175 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D IT882_08425 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:msf01503] D IT882_00100 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D IT882_00175 DUF2156 domain-containing protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:msf01000] C 01001 Protein kinases [BR:msf01001] D IT882_06115 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D IT882_00130 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D IT882_00135 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D IT882_02180 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D IT882_02580 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D IT882_02465 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D IT882_02910 HAMP domain-containing histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D IT882_01570 MASE1 domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D IT882_12005 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D IT882_03870 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D IT882_10965 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D IT882_11825 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D IT882_12520 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D IT882_06015 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D IT882_04885 GHKL domain-containing protein K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D IT882_03940 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:msf01009] D IT882_02260 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D IT882_04565 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D IT882_00150 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D IT882_07210 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:msf01002] D IT882_05605 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D IT882_06260 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D IT882_08105 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D IT882_06040 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D IT882_15810 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D IT882_04665 pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D IT882_02885 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D IT882_05800 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D IT882_00695 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D IT882_07470 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D IT882_02685 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D IT882_10620 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D IT882_10130 linear amide C-N hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D IT882_00115 class E sortase K07284 srtA; sortase A [EC:3.4.22.70] D IT882_02205 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D IT882_02595 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D IT882_10545 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D IT882_10885 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D IT882_08780 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D IT882_14825 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D IT882_08425 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D IT882_07910 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D IT882_09600 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D IT882_00450 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D IT882_02035 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D IT882_09115 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D IT882_10415 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D IT882_11955 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D IT882_01030 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D IT882_10790 M48 family metalloprotease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D IT882_10280 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D IT882_07405 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D IT882_14535 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D IT882_13975 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D IT882_08600 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D IT882_08605 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D IT882_11640 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D IT882_11645 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D IT882_05060 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D IT882_09100 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D IT882_00230 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11] D IT882_06750 Type 1 glutamine amidotransferase-like domain-containing protein K05995 pepE; dipeptidase E [EC:3.4.13.21] D IT882_04355 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease D IT882_13085 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease C 01003 Glycosyltransferases [BR:msf01003] D IT882_00855 glycosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D IT882_11175 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D IT882_14995 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D IT882_04910 glycosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D IT882_07220 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D IT882_11625 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF D IT882_03755 glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D IT882_02145 glycosyltransferase family 2 protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D IT882_09730 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:msf01005] D IT882_03750 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:msf01011] D IT882_12810 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D IT882_06225 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D IT882_06165 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D IT882_04620 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D IT882_02695 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D IT882_06310 hypothetical protein K01775 alr; alanine racemase [EC:5.1.1.1] D IT882_06315 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D IT882_10250 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D IT882_06175 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D IT882_07310 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D IT882_16060 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D IT882_06150 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D IT882_07405 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D IT882_14535 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D IT882_13975 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D IT882_08425 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D IT882_00115 class E sortase K07284 srtA; sortase A [EC:3.4.22.70] D IT882_07640 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:msf01004] D IT882_08205 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D IT882_08210 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D IT882_06200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_07385 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_08680 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_11500 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IT882_12275 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IT882_06100 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D IT882_08925 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D IT882_09775 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D IT882_04590 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D IT882_07150 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:msf01006] D IT882_06125 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D IT882_10305 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D IT882_10750 isoprenyl transferase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D IT882_08290 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D IT882_10310 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D IT882_13520 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D IT882_07110 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:msf01007] D IT882_05185 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D IT882_03445 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D IT882_04155 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IT882_11135 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D IT882_08545 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D IT882_08395 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D IT882_01075 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D IT882_10905 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D IT882_14625 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D IT882_14090 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D IT882_04675 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D IT882_07745 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D IT882_07650 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D IT882_05120 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D IT882_05125 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D IT882_12805 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D IT882_03915 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D IT882_05070 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D IT882_15325 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D IT882_05155 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D IT882_12755 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D IT882_11080 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D IT882_09670 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D IT882_11790 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:msf00194] D IT882_04535 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D IT882_04530 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D IT882_04525 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D IT882_04520 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D IT882_04515 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D IT882_04510 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D IT882_04505 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:msf03000] D IT882_05725 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D IT882_09560 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D IT882_03140 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D IT882_14990 helix-turn-helix domain-containing protein K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA D IT882_12700 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D IT882_04900 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D IT882_03200 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D IT882_13725 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D IT882_01505 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D IT882_01715 LacI family DNA-binding transcriptional regulator K17640 bxlR; LacI family transcriptional regulator, xylobiose transport system transcriptional regulator D IT882_04175 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D IT882_01250 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D IT882_08710 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D IT882_12320 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D IT882_02860 helix-turn-helix transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D IT882_15190 TetR family transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D IT882_01135 mftR; mycofactocin system transcriptional regulator K24699 mftR; TetR/AcrR family transcriptional regulator, regulator of mycofactocin system D IT882_11495 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response D IT882_05865 Lrp/AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D IT882_01750 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D IT882_06575 helix-turn-helix transcriptional regulator K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein D IT882_11445 helix-turn-helix transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism D IT882_15720 helix-turn-helix transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism D IT882_02625 hypothetical protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D IT882_05925 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D IT882_07020 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D IT882_13880 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D IT882_08720 heavy metal-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D IT882_15075 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D IT882_09925 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D IT882_15290 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D IT882_03825 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D IT882_09585 helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D IT882_10020 helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D IT882_09375 helix-turn-helix domain-containing protein K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D IT882_05425 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D IT882_08115 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D IT882_09955 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D IT882_05540 helix-turn-helix transcriptional regulator K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor D IT882_03290 helix-turn-helix domain-containing protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D IT882_05005 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator D IT882_14815 PadR family transcriptional regulator K26740 vanR; PadR family transcriptional regulator, regulator of vanillate utilization D IT882_00365 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D IT882_11785 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D IT882_14860 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D IT882_03625 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D IT882_15870 hypothetical protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D IT882_11550 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D IT882_01100 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D IT882_14340 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D IT882_14365 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D IT882_03540 PTS sugar transporter subunit IIA K03491 licR; probable licABCH operon transcriptional regulator D IT882_03775 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D IT882_03945 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D IT882_02745 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D IT882_00985 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D IT882_08035 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D IT882_16080 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D IT882_11990 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D IT882_08350 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D IT882_01425 PadR family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D IT882_01685 PspC domain-containing protein K03973 pspC; phage shock protein C D IT882_03410 sugar-binding transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D IT882_06220 sugar-binding transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D IT882_07590 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D IT882_08750 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D IT882_00460 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor D IT882_06290 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D IT882_06135 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:msf03021] D IT882_02085 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D IT882_07550 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D IT882_07900 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D IT882_03970 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D IT882_11575 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D IT882_12115 sigK; ECF RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D IT882_09875 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D IT882_05990 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D IT882_06645 sigJ; RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D IT882_12140 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D IT882_04700 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D IT882_07600 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D IT882_12720 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D IT882_00460 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor D IT882_10770 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D IT882_04455 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D IT882_10925 hypothetical protein K03057 tfs; transcription factor S C 03019 Messenger RNA biogenesis [BR:msf03019] D IT882_00660 ATP-binding protein K13525 VCP; transitional endoplasmic reticulum ATPase D IT882_08500 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D IT882_09245 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D IT882_08855 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D IT882_05760 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D IT882_00795 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D IT882_10875 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D IT882_04455 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D IT882_15090 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D IT882_11840 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D IT882_12050 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D IT882_11885 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D IT882_14960 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D IT882_07040 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D IT882_07355 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D IT882_11215 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:msf03011] D IT882_06905 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D IT882_01960 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D IT882_07660 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D IT882_02010 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D IT882_16005 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D IT882_01905 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D IT882_01995 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D IT882_01925 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D IT882_02080 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D IT882_01900 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D IT882_02075 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D IT882_15255 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D IT882_04845 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D IT882_09140 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D IT882_01975 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D IT882_15995 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D IT882_01950 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D IT882_08375 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D IT882_12710 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D IT882_01945 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D IT882_01930 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D IT882_01935 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D IT882_01990 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D IT882_02000 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D IT882_15990 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D IT882_12675 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D IT882_12715 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D IT882_12670 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D IT882_02645 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D IT882_01980 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D IT882_02020 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D IT882_01965 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D IT882_02090 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D IT882_02005 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D IT882_09105 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D IT882_05110 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D IT882_08490 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D IT882_01955 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D IT882_01940 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D IT882_01985 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D IT882_08485 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D IT882_15265 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D IT882_01970 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D IT882_02015 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D IT882_07230 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D IT882_09250 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D IT882_15260 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D IT882_16115 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D IT882_05105 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D IT882_02070 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D IT882_10950 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D IT882_05200 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D IT882_05190 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D IT882_05195 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:msf03009] D IT882_09245 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D IT882_08855 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D IT882_00660 ATP-binding protein K13525 VCP; transitional endoplasmic reticulum ATPase D IT882_08315 era; GTPase Era K03595 era; GTPase D IT882_00460 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor D IT882_04700 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D IT882_07600 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D IT882_12720 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D IT882_11070 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D IT882_07530 rRNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D IT882_09270 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D IT882_08340 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D IT882_16090 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D IT882_06140 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D IT882_11140 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D IT882_05225 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D IT882_11970 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D IT882_14485 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D IT882_05310 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D IT882_11405 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D IT882_08500 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D IT882_05760 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D IT882_05325 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D IT882_04715 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D IT882_08450 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D IT882_08325 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D IT882_10660 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D IT882_09255 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:msf03016] D IT882_11530 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D IT882_04675 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D IT882_08395 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D IT882_11135 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D IT882_04155 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IT882_01075 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D IT882_07650 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D IT882_14625 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D IT882_07745 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D IT882_14090 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D IT882_08545 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D IT882_10905 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D IT882_05120 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D IT882_05125 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D IT882_05185 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D IT882_03445 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D IT882_08335 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D IT882_07325 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D IT882_04125 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D IT882_02110 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D IT882_04735 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D IT882_08980 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IT882_10595 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IT882_16110 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D IT882_08180 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D IT882_10245 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D IT882_07815 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D IT882_13680 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D IT882_05025 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D IT882_05115 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D IT882_08975 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D IT882_11730 Fe-S cluster assembly protein HesB K13628 iscA; iron-sulfur cluster assembly protein D IT882_12030 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D IT882_01020 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D IT882_02705 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D IT882_02715 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D IT882_02700 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D IT882_13260 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:msf03012] D IT882_04710 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D IT882_05100 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D IT882_09045 elongation factor Ts K02357 tsf; elongation factor Ts D IT882_01915 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D IT882_04460 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D IT882_09035 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D IT882_02065 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D IT882_07605 efp; elongation factor P K02356 efp; elongation factor P D IT882_10070 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:msf03110] D IT882_14975 AAA family ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D IT882_01110 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D IT882_08595 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D IT882_15090 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D IT882_11840 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D IT882_08345 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D IT882_15085 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D IT882_13900 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D IT882_05355 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D IT882_02735 groES; co-chaperone GroES K04078 groES; chaperonin GroES D IT882_01030 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D IT882_04505 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D IT882_12550 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D IT882_03265 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D IT882_00100 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D IT882_10085 thioredoxin family protein K03671 TXN; thioredoxin D IT882_16070 trxA; thioredoxin K03671 TXN; thioredoxin D IT882_05365 trxA; thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] C 04131 Membrane trafficking [BR:msf04131] D IT882_00660 ATP-binding protein K13525 VCP; transitional endoplasmic reticulum ATPase D IT882_08235 flotillin family protein K07192 FLOT; flotillin D IT882_07055 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D IT882_12015 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D IT882_07460 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D IT882_09120 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome [BR:msf03051] D IT882_07335 WYL domain-containing protein K13572 pafB; proteasome accessory factor B D IT882_07340 WYL domain-containing protein K13573 pafC; proteasome accessory factor C C 03032 DNA replication proteins [BR:msf03032] D IT882_06590 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D IT882_05725 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D IT882_15250 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D IT882_15975 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D IT882_08265 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D IT882_05395 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_08120 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_08830 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_13010 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_16000 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_06280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D IT882_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D IT882_08380 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D IT882_12235 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D IT882_06780 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IT882_10665 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IT882_12365 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D IT882_09095 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D IT882_07435 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D IT882_08970 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D IT882_04275 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D IT882_07875 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D IT882_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D IT882_05830 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D IT882_12245 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:msf03036] D IT882_05725 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D IT882_09245 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D IT882_08235 flotillin family protein K07192 FLOT; flotillin D IT882_15685 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2 D IT882_11450 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2 D IT882_15250 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D IT882_12860 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D IT882_12700 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D IT882_01750 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D IT882_09205 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D IT882_05300 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D IT882_05305 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D IT882_10065 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D IT882_06150 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D IT882_04570 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D IT882_06230 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D IT882_06170 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D IT882_06235 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D IT882_07795 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D IT882_06245 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF D IT882_05295 ParA family protein K03496 parA; chromosome partitioning protein D IT882_16085 ParA family protein K03496 parA; chromosome partitioning protein D IT882_08035 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D IT882_16080 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D IT882_16090 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D IT882_09065 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D IT882_05255 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD D IT882_10440 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D IT882_07045 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:msf03400] D IT882_03145 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D IT882_11440 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D IT882_14120 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D IT882_04050 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D IT882_15270 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D IT882_04725 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D IT882_03245 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D IT882_05350 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D IT882_00090 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D IT882_00865 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D IT882_07850 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D IT882_03140 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D IT882_00815 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D IT882_03425 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D IT882_01640 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D IT882_08755 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D IT882_03450 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D IT882_14900 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D IT882_08970 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D IT882_07435 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D IT882_07010 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D IT882_07035 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D IT882_10355 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D IT882_10375 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D IT882_02085 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D IT882_07550 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D IT882_10940 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D IT882_10705 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D IT882_10710 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D IT882_06280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D IT882_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D IT882_08380 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D IT882_12235 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D IT882_06780 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IT882_10665 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IT882_12365 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D IT882_05395 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_08120 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_08830 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_13010 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_16000 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_04275 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D IT882_09945 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D IT882_05015 recA; recombinase RecA K03553 recA; recombination protein RecA D IT882_07705 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D IT882_07700 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D IT882_07710 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D IT882_13715 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D IT882_13720 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D IT882_01200 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D IT882_09265 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D IT882_12360 recR; recombination protein RecR K06187 recR; recombination protein RecR D IT882_05235 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D IT882_10225 Ku protein K10979 ku; DNA end-binding protein Ku D IT882_10230 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D IT882_07875 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D IT882_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D IT882_05830 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D IT882_12245 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D IT882_15250 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D IT882_04250 recombinase RecT K07455 recT; recombination protein RecT D IT882_00795 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D IT882_08890 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D IT882_05060 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D IT882_11740 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D IT882_05020 regulatory protein RecX K03565 recX; regulatory protein D IT882_07965 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D IT882_12055 NUDIX hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D IT882_04970 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D IT882_05245 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D IT882_11280 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D IT882_11275 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:msf03029] D IT882_04710 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D IT882_05100 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D IT882_09045 elongation factor Ts K02357 tsf; elongation factor Ts D IT882_01915 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D IT882_08315 era; GTPase Era K03595 era; GTPase D IT882_05185 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D IT882_08395 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D IT882_14625 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D IT882_04155 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IT882_08905 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D IT882_08900 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D IT882_05395 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_08120 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_08830 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_13010 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_16000 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IT882_15090 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D IT882_15085 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D IT882_11840 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D IT882_02735 groES; co-chaperone GroES K04078 groES; chaperonin GroES D IT882_08345 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D IT882_08980 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IT882_10595 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IT882_10440 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D IT882_07110 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D IT882_07120 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D IT882_14360 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D IT882_16100 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:msf02000] D IT882_04555 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D IT882_04560 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D IT882_03155 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D IT882_03205 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D IT882_03300 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D IT882_13970 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D IT882_12615 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D IT882_12610 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D IT882_11015 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D IT882_12600 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D IT882_15425 substrate-binding domain-containing protein K02020 modA; molybdate transport system substrate-binding protein D IT882_12595 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D IT882_12590 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D IT882_11360 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D IT882_11365 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D IT882_11355 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D IT882_05855 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D IT882_05840 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D IT882_05845 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D IT882_05850 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D IT882_00300 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D IT882_00295 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D IT882_11035 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D IT882_11040 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein D IT882_11045 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D IT882_11050 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D IT882_01755 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D IT882_01405 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D IT882_01760 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D IT882_01770 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D IT882_09465 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D IT882_01765 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D IT882_00475 ATP-binding cassette domain-containing protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D IT882_01275 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D IT882_01420 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D IT882_11895 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D IT882_12940 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D IT882_12935 ABC transporter permease subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D IT882_12930 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D IT882_13755 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D IT882_01545 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D IT882_03195 carbohydrate ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D IT882_03190 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D IT882_13750 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D IT882_01540 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D IT882_03185 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D IT882_13745 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D IT882_01535 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D IT882_12650 carbohydrate ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein D IT882_12645 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein D IT882_12640 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein D IT882_00630 carbohydrate ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein D IT882_00635 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein D IT882_00640 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein D IT882_03220 extracellular solute-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein D IT882_03230 carbohydrate ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein D IT882_11155 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D IT882_11145 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D IT882_11150 sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D IT882_02495 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D IT882_10200 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D IT882_14755 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D IT882_02480 ABC transporter permease K10440 rbsC; ribose transport system permease protein D IT882_10190 ABC transporter permease K10440 rbsC; ribose transport system permease protein D IT882_14760 ABC transporter permease K10440 rbsC; ribose transport system permease protein D IT882_02485 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D IT882_14765 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D IT882_10195 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D IT882_14155 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D IT882_14140 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D IT882_14145 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D IT882_14160 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D IT882_03495 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D IT882_01230 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D IT882_01215 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D IT882_03510 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D IT882_01210 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D IT882_03500 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D IT882_01225 ATP-binding cassette domain-containing protein K23537 nupA; general nucleoside transport system ATP-binding protein D IT882_06520 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D IT882_08695 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D IT882_11595 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D IT882_14185 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D IT882_05280 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D IT882_11590 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D IT882_14175 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D IT882_05275 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D IT882_06530 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D IT882_08705 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D IT882_11585 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D IT882_14180 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D IT882_12075 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D IT882_12080 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D IT882_12085 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D IT882_12090 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D IT882_13840 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D IT882_13825 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D IT882_13830 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D IT882_13835 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D IT882_02760 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IT882_03310 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IT882_09800 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IT882_03320 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D IT882_09785 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D IT882_02780 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D IT882_03315 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D IT882_03330 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D IT882_09795 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D IT882_03325 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D IT882_09790 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D IT882_02770 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D IT882_11480 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D IT882_11475 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D IT882_11470 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D IT882_10535 ABC transporter permease K13890 gsiC; glutathione transport system permease protein D IT882_10530 ABC transporter permease K13891 gsiD; glutathione transport system permease protein D IT882_03005 LysR family transcriptional regulator K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D IT882_04080 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D IT882_03015 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D IT882_03020 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D IT882_04065 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D IT882_10520 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D IT882_05880 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D IT882_05885 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D IT882_05890 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein D IT882_05895 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D IT882_07225 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D IT882_07170 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D IT882_14520 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D IT882_00765 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D IT882_00770 energy-coupling factor ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D IT882_14530 ECF transporter S component K16925 ykoE; energy-coupling factor transport system permease protein D IT882_00775 ECF transporter S component K16925 ykoE; energy-coupling factor transport system permease protein D IT882_09915 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D IT882_15305 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D IT882_15295 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D IT882_15300 metal ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D IT882_03370 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein D IT882_03375 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein D IT882_03365 ATP-binding cassette domain-containing protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein D IT882_08585 ABC transporter permease K09813 hrtB; hemin transport system permease protein D IT882_08590 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D IT882_14615 ABC transporter permease K25140 drrB; daunorubicin/doxorubicin transport system permease protein D IT882_14620 ATP-binding cassette domain-containing protein K25141 drrA; daunorubicin/doxorubicin transport system ATP-binding protein D IT882_15200 ABC transporter permease K25147 berB; beta-exotoxin I transport system permease protein D IT882_15195 ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein D IT882_10065 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D IT882_02935 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D IT882_03710 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D IT882_10265 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D IT882_11660 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein D IT882_11665 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein D IT882_12795 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D IT882_14550 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D IT882_14940 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D IT882_00380 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D IT882_01455 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D IT882_02930 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D IT882_03715 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D IT882_10270 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D IT882_11655 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D IT882_12800 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D IT882_14545 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D IT882_00315 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D IT882_00375 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D IT882_01460 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D IT882_01810 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D IT882_03895 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D IT882_12485 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D IT882_01805 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D IT882_03900 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D IT882_09335 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D IT882_12475 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D IT882_07140 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D IT882_14835 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D IT882_11075 sugar porter family MFS transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D IT882_06400 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D IT882_14735 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D IT882_12635 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D IT882_13465 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D IT882_06965 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D IT882_09680 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D IT882_10615 DHA2 family efflux MFS transporter permease subunit K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D IT882_09820 MFS transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein D IT882_11725 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D IT882_03550 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D IT882_04890 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D IT882_03560 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D IT882_03555 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D IT882_03835 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z D IT882_10835 two pore domain potassium channel family protein K10716 kch; voltage-gated potassium channel D IT882_15050 ion transporter K10716 kch; voltage-gated potassium channel D IT882_07790 ammonium transporter K03320 amt; ammonium transporter, Amt family D IT882_13795 formate/nitrite transporter family protein K02598 nirC; nitrite transporter D IT882_11425 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D IT882_08785 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D IT882_13495 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D IT882_00735 CrcB family protein K06199 crcB; fluoride exporter D IT882_16010 DUF1211 domain-containing protein K24915 TMEM175; TMEM175 potassium channel family protein D IT882_15495 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D IT882_04000 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D IT882_08320 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D IT882_10235 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D IT882_11345 ZIP family zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family D IT882_09145 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump D IT882_09150 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump D IT882_15215 EamA family transporter K11939 rhtA; inner membrane transporter RhtA D IT882_02740 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D IT882_10915 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D IT882_00825 cation:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D IT882_15110 cation:proton antiporter regulatory subunit K07228 khtT; K+:H+ antiporter subunit KhtT D IT882_15105 cation:proton antiporter K26732 khtU; K+:H+ antiporter subunit KhtU D IT882_13640 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D IT882_13645 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D IT882_13650 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D IT882_14830 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family D IT882_15065 ion channel protein K03281 clcA; chloride channel protein, CIC family D IT882_09390 chrA; chromate efflux transporter K07240 chrA; chromate transporter D IT882_08775 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D IT882_11465 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D IT882_15060 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D IT882_14855 Nramp family divalent metal transporter K03322 mntH; manganese transport protein D IT882_05430 arsenic resistance protein K03325 ACR3; arsenite transporter D IT882_00205 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D IT882_00210 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D IT882_00215 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D IT882_00220 sodium:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D IT882_00225 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D IT882_16060 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D IT882_07395 AEC family transporter K13936 mdcF; malonate transporter and related proteins D IT882_12705 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D IT882_10505 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D IT882_10500 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D IT882_10780 AI-2E family transporter K20469 K20469; putative heme transporter D IT882_07280 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein D IT882_09395 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein D IT882_00040 VIT family protein K22736 VIT; vacuolar iron transporter family protein D IT882_06170 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D IT882_04855 peptidase M75 family protein K07224 efeO; iron uptake system component EfeO D IT882_04805 sulfite exporter TauE/SafE family protein K06196 ccdA; cytochrome c-type biogenesis protein D IT882_05590 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D IT882_02465 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D IT882_00420 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D IT882_05615 copper resistance protein CopC K07156 copC; copper resistance protein C D IT882_12555 copper resistance protein CopC K07156 copC; copper resistance protein C C 02044 Secretion system [BR:msf02044] D IT882_06040 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D IT882_15810 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D IT882_10175 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D IT882_12270 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D IT882_10170 type II secretion system F family protein K12510 tadB; tight adherence protein B D IT882_12265 type II secretion system F family protein K12510 tadB; tight adherence protein B D IT882_10165 type II secretion system F family protein K12511 tadC; tight adherence protein C D IT882_06250 YggT family protein K02221 yggT; YggT family protein D IT882_08390 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA D IT882_05400 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D IT882_08095 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D IT882_03910 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D IT882_15530 hypothetical protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D IT882_07690 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D IT882_12725 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D IT882_07685 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D IT882_07070 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D IT882_02025 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D IT882_09175 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D IT882_09200 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D IT882_07695 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D IT882_14360 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D IT882_16100 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D IT882_07345 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D IT882_10445 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D IT882_07350 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:msf02042] D IT882_15495 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D IT882_04000 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D IT882_08320 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D IT882_10755 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:msf02022] D IT882_02910 HAMP domain-containing histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D IT882_01570 MASE1 domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D IT882_12005 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D IT882_12000 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3 D IT882_03870 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D IT882_03865 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA D IT882_10965 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D IT882_11825 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D IT882_12520 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D IT882_02150 response regulator K02483 K02483; two-component system, OmpR family, response regulator D IT882_10960 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D IT882_11710 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D IT882_11820 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D IT882_12515 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D IT882_06430 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D IT882_02630 helix-turn-helix transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D IT882_06015 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D IT882_06025 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR D IT882_04885 GHKL domain-containing protein K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D IT882_03940 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D IT882_07445 response regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:msf02035] D IT882_06040 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D IT882_15810 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D IT882_10175 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D IT882_12270 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:msf04812] D IT882_06235 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D IT882_05295 ParA family protein K03496 parA; chromosome partitioning protein D IT882_16085 ParA family protein K03496 parA; chromosome partitioning protein D IT882_08035 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D IT882_16080 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:msf04147] D IT882_10875 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D IT882_07055 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D IT882_07060 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D IT882_07460 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D IT882_09120 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D IT882_00100 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D IT882_09600 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D IT882_08235 flotillin family protein K07192 FLOT; flotillin D IT882_11840 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D IT882_15090 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D IT882_06565 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D IT882_07095 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D IT882_02870 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D IT882_01915 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D IT882_00660 ATP-binding protein K13525 VCP; transitional endoplasmic reticulum ATPase D IT882_08335 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D IT882_01320 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D IT882_06100 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D IT882_08925 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D IT882_02030 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D IT882_00410 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D IT882_05170 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D IT882_10475 N(G),N(G)-dimethylarginine dimethylaminohydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18] D IT882_01780 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D IT882_14215 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D IT882_03420 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D IT882_08165 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D IT882_11085 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D IT882_09690 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D IT882_03130 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D IT882_06060 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_07915 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IT882_14405 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D IT882_14955 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D IT882_07065 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D IT882_12015 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:msf02048] D IT882_06890 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D IT882_13270 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D IT882_06885 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D IT882_04275 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D IT882_05725 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D IT882_06850 restriction endonuclease K07448 mrr; restriction system protein D IT882_06860 restriction endonuclease K07448 mrr; restriction system protein D IT882_00555 hypothetical protein K07448 mrr; restriction system protein D IT882_06820 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D IT882_06825 antitoxin K26989 mazE9; antitoxin MazE9 D IT882_06815 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D IT882_02545 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D IT882_05930 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D IT882_02540 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM D IT882_05935 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM D IT882_02180 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D IT882_02580 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D IT882_01685 PspC domain-containing protein K03973 pspC; phage shock protein C D IT882_13380 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D IT882_08930 Fic family protein K07341 doc; death on curing protein D IT882_13260 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D IT882_02515 type II toxin-antitoxin system VapC family toxin K19686 vapC; ribonuclease VapC [EC:3.1.-.-] D IT882_02520 type II toxin-antitoxin system VapB family antitoxin K19687 vapB; antitoxin VapB D IT882_06235 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D IT882_08980 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IT882_10595 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:msf01504] D IT882_06765 aminoglycoside 3'-phosphotransferase K00897 aphA; kanamycin kinase [EC:2.7.1.95] D IT882_06965 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D IT882_09680 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D IT882_08425 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D IT882_00175 DUF2156 domain-containing protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:msf00537] D IT882_09600 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:msf03100] D IT882_08445 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IT882_00050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IT882_11395 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IT882_04145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IT882_11720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IT882_13925 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IT882_08860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IT882_08255 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D IT882_00995 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D IT882_07770 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D IT882_09640 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D IT882_13045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D IT882_10995 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D IT882_09515 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IT882_01000 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IT882_15135 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IT882_07775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IT882_08625 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IT882_08850 tRNA-His K14226 tRNA-His; tRNA His D IT882_00045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D IT882_00165 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IT882_07300 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IT882_07450 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IT882_10850 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IT882_10210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IT882_09825 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D IT882_12135 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D IT882_10290 tRNA-Met K14230 tRNA-Met; tRNA Met D IT882_08240 tRNA-Ile K14230 tRNA-Met; tRNA Met D IT882_12875 tRNA-Met K14230 tRNA-Met; tRNA Met D IT882_00990 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D IT882_05375 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IT882_08620 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IT882_12310 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IT882_01335 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IT882_14065 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IT882_14080 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IT882_12410 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IT882_12880 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IT882_11875 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IT882_12225 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IT882_12730 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D IT882_12905 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D IT882_07765 tRNA-Val K14237 tRNA-Val; tRNA Val D IT882_07780 tRNA-Val K14237 tRNA-Val; tRNA Val D IT882_08190 tRNA-Val K14237 tRNA-Val; tRNA Val D IT882_05190 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D IT882_05195 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D IT882_05200 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D IT882_12390 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D IT882_08180 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D IT882_10040 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D IT882_11180 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D IT882_13360 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D IT882_15590 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D IT882_02490 Gfo/Idh/MocA family oxidoreductase K24995 E1.1.1.425; levoglucosan dehydrogenase [EC:1.1.1.425] D IT882_11065 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D IT882_10800 FAD-binding protein K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-] D IT882_14570 fgd; glucose-6-phosphate dehydrogenase (coenzyme-F420) K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2] D IT882_03100 nitroreductase family deazaflavin-dependent oxidoreductase K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-] D IT882_01150 mftC; mycofactocin radical SAM maturase K24696 mftC; [mycofactocin precursor peptide]-tyrosine decarboxylase / 3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethylpyrrolidin-2-one synthase [EC:1.3.98.7 4.1.99.26] D IT882_03580 NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D IT882_00600 zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D IT882_08835 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D IT882_11865 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D IT882_12545 Dyp-type peroxidase K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19] D IT882_03955 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D IT882_04945 OsmC family peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D IT882_13875 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D IT882_00780 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D IT882_06300 TauD/TfdA family dioxygenase K18058 asnO; L-asparagine oxygenase [EC:1.14.11.39] D IT882_00085 NtaA/DmoA family FMN-dependent monooxygenase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D IT882_00530 NtaA/DmoA family FMN-dependent monooxygenase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D IT882_13470 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D IT882_00850 NrdH-redoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3] D IT882_09370 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D IT882_12165 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D IT882_04605 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D IT882_05335 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D IT882_06610 GNAT family N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D IT882_05575 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D IT882_11980 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D IT882_07475 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D IT882_06440 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D IT882_10975 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D IT882_14015 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D IT882_08160 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D IT882_14235 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D IT882_14470 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D IT882_14480 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D IT882_09760 alpha/beta fold hydrolase K19311 lipV; lipase [EC:3.1.1.-] D IT882_08815 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D IT882_04090 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D IT882_13605 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D IT882_10405 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D IT882_00185 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-] D IT882_13740 yicI; alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D IT882_10510 beta-lactamase family protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D IT882_15220 beta-lactamase family protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D IT882_01270 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D IT882_06095 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D IT882_08250 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D IT882_03115 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D IT882_10285 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D IT882_02240 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D IT882_03845 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D IT882_11200 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D IT882_12395 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D IT882_05795 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D IT882_14745 sugar phosphate isomerase/epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31] D IT882_06190 AMP-binding protein K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48] D IT882_06185 hypothetical protein K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-] D IT882_00980 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D IT882_05545 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D IT882_12665 HAD-IC family P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] D IT882_05420 cadA; cadmium-translocating P-type ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D IT882_02850 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D IT882_00385 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins D IT882_14410 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D IT882_06030 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism D IT882_11285 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction D IT882_00885 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D IT882_09550 VOC family protein K08234 yaeR; glyoxylase I family protein D IT882_06240 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D IT882_03760 O-antigen ligase family protein K16567 exoQ; exopolysaccharide production protein ExoQ D IT882_03700 glycosyltransferase family 2 protein K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase C 99987 Cofactor metabolism D IT882_09860 AarF/ABC1/UbiB kinase family protein K03688 ubiB; ubiquinone biosynthesis protein D IT882_14465 AarF/ABC1/UbiB kinase family protein K03688 ubiB; ubiquinone biosynthesis protein D IT882_01140 mftA; mycofactocin precursor K24694 mftA; mycofactocin precursor peptide MftA D IT882_01145 mftB; mycofactocin biosynthesis chaperone MftB K24695 mftB; mycofactocin biosynthesis protein MftB C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D IT882_06540 cold-shock protein K03704 cspA; cold shock protein D IT882_11800 cold shock domain-containing protein K03704 cspA; cold shock protein D IT882_11845 cold-shock protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D IT882_08870 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D IT882_08615 trigger factor K03545 tig; trigger factor D IT882_10050 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D IT882_11290 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH D IT882_09080 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D IT882_13570 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein D IT882_00465 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D IT882_13435 DUF1156 domain-containing protein K07445 K07445; putative DNA methylase D IT882_10670 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D IT882_09085 YraN family protein K07460 yraN; putative endonuclease D IT882_05410 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D IT882_09075 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D IT882_07665 replication-associated recombination protein A K07478 ycaJ; putative ATPase D IT882_06840 transposase K07483 K07483; transposase D IT882_09960 transposase K07483 K07483; transposase D IT882_00925 transposase K07483 K07483; transposase D IT882_06925 IS256 family transposase K07493 K07493; putative transposase D IT882_10825 IS256 family transposase K07493 K07493; putative transposase D IT882_02425 IS3 family transposase K07497 K07497; putative transposase D IT882_05530 IS3 family transposase K07497 K07497; putative transposase D IT882_06835 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase D IT882_08645 IS3 family transposase K07497 K07497; putative transposase D IT882_15710 IS3 family transposase K07497 K07497; putative transposase D IT882_00930 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D IT882_04105 PspA/IM30 family protein K03969 pspA; phage shock protein A D IT882_10080 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E D IT882_06870 type I restriction enzyme HsdR N-terminal domain-containing protein K07504 K07504; predicted type IV restriction endonuclease B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D IT882_04695 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D IT882_02450 lipopolysaccharide biosynthesis protein K03328 TC.PST; polysaccharide transporter, PST family C 99978 Cell growth D IT882_16095 DNA-binding protein K06346 jag; spoIIIJ-associated protein D IT882_12945 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D IT882_13425 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase C 99993 Cell motility C 99995 Signaling proteins D IT882_10515 typA; translational GTPase TypA K06207 typA; GTP-binding protein D IT882_08330 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D IT882_10740 PhoH family protein K07175 phoH2; PhoH-like ATPase D IT882_13235 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D IT882_15045 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA D IT882_03705 DUF2304 domain-containing protein K09153 K09153; small membrane protein C 99994 Others D IT882_12010 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D IT882_09320 TerC family protein K05794 terC; tellurite resistance protein TerC D IT882_15500 TerC family protein K05794 terC; tellurite resistance protein TerC B B 09194 Poorly characterized C 99996 General function prediction only D IT882_15375 GNAT family N-acetyltransferase K02348 elaA; ElaA protein D IT882_08790 globin K06886 glbN; hemoglobin D IT882_05130 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily D IT882_12185 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily D IT882_12505 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily D IT882_13555 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily D IT882_14635 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily D IT882_01355 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily D IT882_07125 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D IT882_07130 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D IT882_06510 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D IT882_10115 VOC family protein K04750 phnB; PhnB protein D IT882_05580 cytochrome c oxidase assembly protein K02351 K02351; putative membrane protein D IT882_10795 LemA family protein K03744 lemA; LemA protein D IT882_04905 DedA family protein K03975 dedA; membrane-associated protein D IT882_08405 DedA family protein K03975 dedA; membrane-associated protein D IT882_10215 VTT domain-containing protein K03975 dedA; membrane-associated protein D IT882_05135 hypothetical protein K01421 yhgE; putative membrane protein D IT882_12510 hypothetical protein K01421 yhgE; putative membrane protein D IT882_13560 YhgE/Pip family protein K01421 yhgE; putative membrane protein D IT882_00235 YhgE/Pip family protein K01421 yhgE; putative membrane protein D IT882_01560 DUF202 domain-containing protein K00389 yidH; putative membrane protein D IT882_15330 phage holin family protein K08972 K08972; putative membrane protein D IT882_01065 PH domain-containing protein K08981 K08981; putative membrane protein D IT882_09965 SHOCT domain-containing protein K08982 K08982; putative membrane protein D IT882_00595 DUF1304 domain-containing protein K08987 K08987; putative membrane protein D IT882_06455 YchJ family protein K09858 K09858; SEC-C motif domain protein C 99997 Function unknown D IT882_07805 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein D IT882_09135 RNA-binding protein K06960 K06960; uncharacterized protein D IT882_13730 N-acetyltransferase K06975 K06975; uncharacterized protein D IT882_00785 N-acetyltransferase K06975 K06975; uncharacterized protein D IT882_01005 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein D IT882_01395 cupin domain-containing protein K06995 K06995; uncharacterized protein D IT882_14445 VOC family protein K06996 K06996; uncharacterized protein D IT882_12745 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D IT882_14840 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D IT882_09015 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein D IT882_07015 VOC family protein K07032 K07032; uncharacterized protein D IT882_10120 amidohydrolase family protein K07045 K07045; uncharacterized protein D IT882_02395 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein D IT882_02530 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein D IT882_02565 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein D IT882_12125 PIN domain-containing protein K07064 K07064; uncharacterized protein D IT882_02355 PIN domain-containing protein K07065 K07065; uncharacterized protein D IT882_04940 TIGR01777 family protein K07071 K07071; uncharacterized protein D IT882_15285 permease K07089 K07089; uncharacterized protein D IT882_01375 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D IT882_12305 metallophosphoesterase K07098 K07098; uncharacterized protein D IT882_04045 phosphoribosyltransferase K07101 K07101; uncharacterized protein D IT882_11905 NAD(P)H-binding protein K07118 K07118; uncharacterized protein D IT882_13405 NAD(P)H-binding protein K07118 K07118; uncharacterized protein D IT882_04965 SDR family oxidoreductase K07124 K07124; uncharacterized protein D IT882_12155 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein D IT882_16105 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D IT882_01710 bifunctional nuclease family protein K08999 K08999; uncharacterized protein D IT882_10865 DUF501 domain-containing protein K09009 K09009; uncharacterized protein D IT882_04840 DUF167 domain-containing protein K09131 K09131; uncharacterized protein D IT882_03000 DUF1684 domain-containing protein K09164 K09164; uncharacterized protein D IT882_06795 DUF2071 domain-containing protein K09166 K09166; uncharacterized protein D IT882_01060 PH domain-containing protein K09167 K09167; uncharacterized protein D IT882_10045 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D IT882_15605 hypothetical protein K09932 K09932; uncharacterized protein D IT882_16020 DUF779 domain-containing protein K09959 K09959; uncharacterized protein D IT882_05610 zf-TFIIB domain-containing protein K09981 K09981; uncharacterized protein D IT882_01725 ThuA domain-containing protein K09992 K09992; uncharacterized protein D IT882_13485 hypothetical protein K07586 ygaC; uncharacterized protein D IT882_04705 YlxR family protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 24, 2024