+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Medicago truncatula (barrel medic)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        11434004 DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        11428063 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        11444055 DNA-directed RNA polymerases II, IV and V subunit 3	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        25495119 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
E        25491968 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        11416659 DNA-directed RNA polymerases IV and V subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        11418894 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        11407767 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        11417477 DNA-directed RNA polymerases II, IV and V subunit 9A	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        120579378 DNA-directed RNA polymerases IV and V subunit 5B	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11438657 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11407830 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11426241 DNA-directed RNA polymerases II and IV subunit 5A isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        25489110 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11442775 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11437228 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11436782 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11419143 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        25479674 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        11444744 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        11441441 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        11442457 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        25483690 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        112416233 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        25498670 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        25492856 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        11405864 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
E        11436803 DNA-directed RNA polymerase IV subunit 1 isoform X2	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        11436034 DNA-directed RNA polymerases IV and V subunit 2	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        25480597 DNA-directed RNA polymerases IV and V subunit 2 isoform X1	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        25484144 DNA-directed RNA polymerase V subunit 7 isoform X1	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        25485783 DNA-directed RNA polymerase V subunit 7	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
C    Basal transcription factors
D      TFIIA
E        11416101 transcription initiation factor IIA large subunit	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        11428884 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        11419402 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        25488844 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        11411099 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        25488804 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        25488839 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        25483447 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        11411517 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        25489234 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        25491712 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        25498820 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        25489244 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        11409951 transcription initiation factor TFIID subunit 1 isoform X2	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        25481544 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        25497809 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        25489943 transcription initiation factor TFIID subunit 4b isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        11425826 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        11443540 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        11432982 transcription initiation factor TFIID subunit 6 isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        11433231 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        11429047 uncharacterized protein LOC11429047	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        25497546 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        25485118 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        11421562 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        25494130 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        11432171 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        25483108 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        25483846 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        11427653 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        11408174 general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        120580122 transcription initiation factor IIE subunit alpha-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        11443092 transcription initiation factor IIE subunit beta	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
E        25502025 LOW QUALITY PROTEIN: general transcription factor IIE subunit 2	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        11406415 transcription initiation factor IIF subunit alpha	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        11405916 transcription initiation factor IIF subunit alpha-like	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        25495919 general transcription factor IIF subunit 2	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        25490245 transcription initiation factor IIF subunit beta	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        25496637 general transcription and DNA repair factor IIH subunit TFB1-1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        11406928 general transcription and DNA repair factor IIH subunit TFB1-1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        11417626 general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        11419054 general transcription and DNA repair factor IIH subunit TFB4 isoform X1	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        11406173 general transcription and DNA repair factor IIH subunit TFB2 isoform X1	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        25493180 general transcription and DNA repair factor IIH subunit TFB2	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        25502076 general transcription and DNA repair factor IIH helicase subunit XPB1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        25487506 general transcription and DNA repair factor IIH helicase subunit XPD	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        11411289 general transcription and DNA repair factor IIH subunit TFB5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        11406059 general transcription and DNA repair factor IIH subunit TFB5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        25496775 cyclin-dependent kinase D-3	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        25489030 cyclin-dependent kinase D-3	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        11434892 CDK-activating kinase assembly factor MAT1 isoform X1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        11415666 cyclin-H1-1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        25500369 mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        11413700 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        11414265 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        11442856 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        11425921 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        25488262 mediator of RNA polymerase II transcription subunit 18 isoform X1	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        25494183 mediator of RNA polymerase II transcription subunit 20a	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        25486902 mediator of RNA polymerase II transcription subunit 20a	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        11446732 mediator of RNA polymerase II transcription subunit 22a	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        11437169 mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
D      Middle
E        25497291 mediator of RNA polymerase II transcription subunit 7a	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        25487810 mediator of RNA polymerase II transcription subunit 7a	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        11411258 mediator of RNA polymerase II transcription subunit 10b	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        25498057 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        25485114 mediator of RNA polymerase II transcription subunit 31 isoform X3	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        11414438 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 14-like	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        25499680 mediator of RNA polymerase II transcription subunit 14 isoform X1	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
D      CDK-module
E        11425000 cyclin-dependent kinase E-1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        11435941 cyclin-C1-2	K15161 CCNC; cyclin-C 
E        11437356 mediator of RNA polymerase II transcription subunit 13 isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        25482512 mediator of RNA polymerase II transcription subunit 23	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        25494748 mediator of RNA polymerase II transcription subunit 25	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        25496886 uncharacterized protein LOC25496886 isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        120580923 mediator of RNA polymerase II transcription subunit 25-like isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        25481943 mediator of RNA polymerase II transcription subunit 25	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        25499482 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        11422779 mediator of RNA polymerase II transcription subunit 32	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        25488025 mediator of RNA polymerase II transcription subunit 33B	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        11440359 mediator of RNA polymerase II transcription subunit 33A	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        11427262 mediator of RNA polymerase II transcription subunit 33A isoform X1	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        11407441 histone acetyltransferase GCN5	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        25499192 histone acetyltransferase GCN5	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        11434915 transformation/transcription domain-associated protein	K08874 TRRAP; transformation/transcription domain-associated protein 
E        11407482 transcriptional adapter ADA2b isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        11408719 transcriptional adapter ADA2b	K11314 TADA2A; transcriptional adapter 2-alpha 
E        11438940 transcriptional adapter ADA2a isoform X2	K11314 TADA2A; transcriptional adapter 2-alpha 
E        25498564 transcriptional adapter ADA2b	K11314 TADA2A; transcriptional adapter 2-alpha 
E        25489632 transcriptional adapter ADA2b	K11314 TADA2A; transcriptional adapter 2-alpha 
E        25481544 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        25497809 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        25489943 transcription initiation factor TFIID subunit 4b isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        11425826 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        11443540 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        11432982 transcription initiation factor TFIID subunit 6 isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        11433231 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        11421562 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        25494130 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        11432171 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        25483846 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        25490955 SAGA-associated factor 11	K11363 SGF11; SAGA-associated factor 11 
E        25497895 SAGA-associated factor 29 homolog B	K11364 SGF29; SAGA-associated factor 29 
E        25497898 SAGA-associated factor 29 homolog B isoform X1	K11364 SGF29; SAGA-associated factor 29 
E        11425259 protein CHROMATIN REMODELING 5	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        11435417 protein CHROMATIN REMODELING 5	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        25497920 transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        11442228 ubiquitin C-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        11440291 ubiquitin C-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        11444450 spliceosome-associated protein 130 A isoform X1	K12830 SF3B3; splicing factor 3B subunit 3 
E        25485734 spliceosome-associated protein 130 A	K12830 SF3B3; splicing factor 3B subunit 3 
E        25499564 splicing factor 3B subunit 3	K12830 SF3B3; splicing factor 3B subunit 3 
E        112419329 LOW QUALITY PROTEIN: pre-mRNA-splicing factor RSE1-like	K12830 SF3B3; splicing factor 3B subunit 3 
E        11442895 spliceosome-associated protein 130 A isoform X1	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        11440396 ATP-dependent helicase BRM	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        11438224 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        11422202 SWI/SNF complex subunit SWI3C	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        11435068 SWI/SNF complex subunit SWI3A	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        11417237 SWI/SNF complex subunit SWI3B	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        11441086 SWI/SNF complex subunit SWI3D isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        11429703 SWI/SNF complex subunit SWI3B	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        11414813 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        25495726 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        11405569 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        25502581 actin-related protein 4 isoform X2	K11340 ACTL6A; actin-like protein 6A 
E        11439919 actin-related protein 4 isoform X1	K11340 ACTL6A; actin-like protein 6A 
D      SWI/SNF complex
E        11438224 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        25502212 RNA polymerase II transcriptional coactivator KELP	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        11424996 RNA polymerase II transcriptional coactivator KIWI isoform X2	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        11427762 protein SHORT ROOT IN SALT MEDIUM 1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        25489816 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        11430820 transcription elongation factor SPT4 homolog 2	K15171 SUPT4H1; transcription elongation factor SPT4 
E        11444230 transcription elongation factor SPT4 homolog 2	K15171 SUPT4H1; transcription elongation factor SPT4 
E        11433805 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        11426983 LOW QUALITY PROTEIN: transcription elongation factor SPT6 homolog	K11292 SUPT6H; transcription elongation factor SPT6 
E        11433787 transcription elongation factor SPT6 homolog isoform X2	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        11435271 uncharacterized protein LOC11435271 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        25495279 polyadenylation and cleavage factor homolog 4	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        25483891 uncharacterized protein LOC25483891	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        25497136 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        11424192 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        25486300 30-kDa cleavage and polyadenylation specificity factor 30	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        25486959 putative uncharacterized protein DDB_G0286901 isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        11432243 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        11425683 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        11413712 serine/threonine-protein phosphatase PP1 isozyme 1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        25502117 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        11406064 serine/threonine-protein phosphatase PP1 isozyme 4	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        11419847 serine/threonine-protein phosphatase PP1 isozyme 3 isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        11424441 serine/threonine-protein phosphatase PP1 isozyme 3	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        11431740 serine/threonine-protein phosphatase PP1 isoform X2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        25491448 symplekin	K06100 SYMPK; symplekin 
E        25490161 uncharacterized protein LOC25490161 isoform X1	K06100 SYMPK; symplekin 
E        25480900 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        112418104 putative ubiquitin-conjugating enzyme E2 38	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        112418725 5'-3' exoribonuclease 3 isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        11426961 NAD-capped RNA hydrolase DXO1	K14845 RAI1; RAT1-interacting protein 
E        11422191 regulation of nuclear pre-mRNA domain-containing protein 1B	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        11427699 regulation of nuclear pre-mRNA domain-containing protein 1A	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        11442951 regulation of nuclear pre-mRNA domain-containing protein 1A	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        11435944 regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        11424341 uncharacterized ATP-dependent helicase C29A10.10c isoform X1	K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] 
E        11422570 peptidyl-prolyl cis-trans isomerase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        11431121 protein PAF1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        11444212 protein CDC73 homolog	K15175 CDC73; parafibromin 
E        25486489 protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        25488701 protein LEO1 homolog	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        25488702 protein LEO1 homolog	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        25491764 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        25493202 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        11421691 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        11411164 ell-associated factor Eaf	K15186 EAF; ELL-associated factor 
E        25499053 cyclin-T1-3	K15188 CCNT; cyclin T 
E        11416201 cyclin-T1-3	K15188 CCNT; cyclin T 
E        11416403 cyclin-T1-5 isoform X1	K15188 CCNT; cyclin T 
E        11444662 cyclin-T1-3-like isoform X1	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        25499053 cyclin-T1-3	K15188 CCNT; cyclin T 
E        11416201 cyclin-T1-3	K15188 CCNT; cyclin T 
E        11416403 cyclin-T1-5 isoform X1	K15188 CCNT; cyclin T 
E        11444662 cyclin-T1-3-like isoform X1	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        11412377 probable RNA methyltransferase At5g51130	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        11441312 la-related protein 6A	K15191 LARP7; La-related protein 7 
E        25499761 la-related protein 6B isoform X2	K15191 LARP7; La-related protein 7 
E        11444117 la-related protein 6C	K15191 LARP7; La-related protein 7 
E        25499053 cyclin-T1-3	K15188 CCNT; cyclin T 
E        11416201 cyclin-T1-3	K15188 CCNT; cyclin T 
E        11416403 cyclin-T1-5 isoform X1	K15188 CCNT; cyclin T 
E        11444662 cyclin-T1-3-like isoform X1	K15188 CCNT; cyclin T 
D      DBIRD complex
D      Others
E        11423253 TATA-binding protein-associated factor BTAF1 isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        25486801 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        11443628 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        11430503 dr1-associated corepressor homolog	K21752 DRAP1; Dr1-associated corepressor 
E        25488573 dr1-associated corepressor homolog isoform X2	K21752 DRAP1; Dr1-associated corepressor 
E        11424560 AP-3 complex subunit beta-1 isoform X2	K21752 DRAP1; Dr1-associated corepressor 
E        11413506 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        25493191 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        11411655 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        11405345 RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        11432635 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        25486899 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        25494112 RNA polymerase II C-terminal domain phosphatase-like 4 isoform X2	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        25486891 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        25486896 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        11443825 RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        11440814 probable C-terminal domain small phosphatase	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        11411270 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        11428642 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        11414358 protein IWS1 homolog 1	K17498 SPN1; transcription factor SPN1 
E        11431603 transcriptional elongation regulator MINIYO isoform X1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        120580536 transcriptional elongation regulator MINIYO-like	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        25483637 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        25484695 RNA polymerase II-associated protein 3 isoform X2	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        25492200 agamous-like MADS-box protein AGL62	K12412 MCM1; pheromone receptor transcription factor 
E        11411004 GPN-loop GTPase QQT1	K24104 GPN; GPN-loop GTPase 
E        11442198 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        11431478 GPN-loop GTPase QQT1	K24104 GPN; GPN-loop GTPase 
E        11419748 GPN-loop GTPase QQT2	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        11410173 DNA-directed RNA polymerase III subunit 1-like	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        11412126 DNA-directed RNA polymerase III subunit 1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        25500573 DNA-directed RNA polymerase III subunit 2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        11444317 DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        112419899 DNA-directed RNA polymerases I and III subunit RPAC2 isoform X1	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        11437781 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        11419754 DNA-directed RNA polymerase III subunit RPC3	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        11405592 DNA-directed RNA polymerase III subunit RPC4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        25491881 uncharacterized protein LOC25491881	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        11410622 uncharacterized protein LOC11410622	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        11409562 DNA-directed RNA polymerase III subunit RPC5	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        25479433 DNA-directed RNA polymerase III subunit rpc6	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        11433591 DNA-directed RNA polymerase III subunit RPC6	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        11443721 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        11419825 glutamic acid-rich protein	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        11417037 DNA-directed RNA polymerase III subunit RPC8 isoform X2	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        120575910 DNA-directed RNA polymerase III subunit RPC9-like isoform X1	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        25496377 DNA-directed RNA polymerase III subunit RPC9	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        120575911 DNA-directed RNA polymerase III subunit RPC9-like	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        120575912 DNA-directed RNA polymerase III subunit RPC9-like	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        120576153 DNA-directed RNA polymerase III subunit RPC9-like	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        25498014 DNA-directed RNA polymerase III subunit rpc9	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        11431765 DNA-directed RNA polymerase III subunit RPC10	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
E        11429365 DNA-directed RNA polymerase III subunit RPC10 isoform X1	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        120579378 DNA-directed RNA polymerases IV and V subunit 5B	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11438657 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11407830 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11426241 DNA-directed RNA polymerases II and IV subunit 5A isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        25489110 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11442775 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11437228 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11436782 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11419143 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        25479674 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        11444744 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        11441441 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        11442457 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        25483690 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        112416233 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        25498670 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        25492856 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        11405864 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        120580532 transcription factor IIIA-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        25489234 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        25491712 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        25498820 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        25489244 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        11436961 transcription factor IIIB 60 kDa subunit isoform X1	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        11417451 plant-specific TFIIB-related protein PTF2	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        25495815 transcription factor IIIB 90 kDa subunit isoform X1	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        11437440 transcription factor TFIIIB component B'' isoform X1	K15198 BDP1; transcription factor TFIIIB component B'' 
E        25492665 transcription factor TFIIIB component B'' isoform X1	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        11419389 uncharacterized protein LOC11419389 isoform X1	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        25483858 uncharacterized protein LOC25483858 isoform X1	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        11444918 general transcription factor 3C polypeptide 3 isoform X2	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        11420262 general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        11409861 general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        25487364 general transcription factor 3C polypeptide 6 isoform X1	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        11409861 general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        11444918 general transcription factor 3C polypeptide 3 isoform X2	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        11420262 general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        11436125 uncharacterized protein LOC11436125 isoform X1	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        25493963 uncharacterized protein LOC25493963 isoform X2	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        25501133 snRNA-activating protein complex subunit isoform X2	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
E        25494348 snRNA-activating protein complex subunit	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
E        25483006 snRNA-activating protein complex subunit isoform X2	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        11421872 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        11444522 DNA-directed RNA polymerase I subunit 1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        11440716 DNA-directed RNA polymerase I subunit 2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        11444317 DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        112419899 DNA-directed RNA polymerases I and III subunit RPAC2 isoform X1	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        11437781 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        11441148 DNA-directed RNA polymerase I subunit rpa49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        11433564 DNA-directed RNA polymerase I subunit rpa49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        112420268 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
E        11424547 DNA-directed RNA polymerase I subunit RPA12	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
E        120577857 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
E        120577861 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
E        120580026 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        120579378 DNA-directed RNA polymerases IV and V subunit 5B	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11438657 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11407830 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11426241 DNA-directed RNA polymerases II and IV subunit 5A isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        25489110 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11442775 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11437228 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11436782 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        11419143 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        25479674 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        11444744 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        11441441 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        11442457 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        25483690 DNA-directed RNA polymerases II, IV and V subunit 8B	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        112416233 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        25498670 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        25492856 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        11405864 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        25489234 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        25491712 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        25498820 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        25489244 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
E        25502164 high mobility group B protein 6	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        25494034 RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        11421065 upstream activation factor subunit spp27	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        11430820 transcription elongation factor SPT4 homolog 2	K15171 SUPT4H1; transcription elongation factor SPT4 
E        11444230 transcription elongation factor SPT4 homolog 2	K15171 SUPT4H1; transcription elongation factor SPT4 
E        11433805 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        11441860 ISWI chromatin-remodeling complex ATPase CHR11 isoform X1	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        25494064 ISWI chromatin-remodeling complex ATPase CHR17	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        120580176 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        5333122 rpoA; RNA polymerase alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        120580065 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        5333159 rpoB; RNA polymerase beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        120579359 DNA-directed RNA polymerase subunit beta'-like	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        120579890 DNA-directed RNA polymerase subunit beta''	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        120580069 DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        5333185 rpoC2; RNA polymerase beta'' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        5333131 rpoC1; RNA polymerase beta' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
D      Sigma factors
E        25480544 RNA polymerase sigma factor sigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        11428191 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial	K03093 sigI; RNA polymerase sigma-I factor 
E        11429595 RNA polymerase sigma factor sigC	K03093 sigI; RNA polymerase sigma-I factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        25488844 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        11411099 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        25488804 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        25488839 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        25483447 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        11411517 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        11408174 general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        120580122 transcription initiation factor IIE subunit alpha-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
#<hr>
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#Last updated: April 9, 2024