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Transcription Machinery - Mycobacterium intracellulare subsp. yongonense
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
E OEM_08710 DNA or RNA helicase of superfamily protein II K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E OEM_43100 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E OEM_44180 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E OEM_44170 DNA-directed RNA polymerase subunit beta prime K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E OEM_31890 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E OEM_34680 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
E OEM_34740 RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E OEM_43290 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_10180 sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_23340 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_44350 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_50690 RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_40590 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_41980 RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_52110 RNA polymerase sigma factor SigM protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_49310 RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_42620 RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_43450 RNA polymerase sigma factor SigL K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_01780 RNA polymerase sigma factor SigI K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_12870 RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_22690 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_17870 RNA polymerase ECF-subfamily protein sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E OEM_26440 RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
E OEM_41500 RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
C Other transcription-related factors
D RNA polymerase-associated proteins
E OEM_35680 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E OEM_32100 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
E OEM_44380 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
E OEM_03900 serine/threonine-protein kinase RsbT K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
E OEM_03910 antagonist protein RsbS K17762 rsbS; rsbT antagonist protein RsbS
E OEM_03920 anti-anti-sigma factor K17763 rsbR; rsbT co-antagonist protein RsbR
E OEM_03890 stage II sporulation protein E (SpoIIE), putative K05518 rsbX; phosphoserine phosphatase RsbX [EC:3.1.3.3]
E OEM_03930 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist
E OEM_37710 stas domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
E OEM_01380 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
E OEM_51840 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Transcription elongation factors
E OEM_11200 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
E OEM_17540 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
E OEM_42660 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E OEM_13810 transcription termination factor Rho K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024