+D GENES KO
#
KEGG Orthology (KO) - Nocardioides dokdonensis
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ndk00010]
D I601_2681 glkA_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I601_2682 glkA_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I601_3426 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I601_2693 pfkA1; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D I601_2060 glpX_2; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D I601_1285 glpX_1; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D I601_2768 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D I601_0928 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D I601_3431 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D I601_3433 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I601_3432 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D I601_1846 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I601_3273 pspB; Putative phosphoserine phosphatase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I601_1976 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I601_3679 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D I601_1284 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D I601_1636 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D I601_3716 aceE_3; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D I601_0379 aceE_1; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D I601_2088 aceE_2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D I601_1188 pdhA; Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D I601_1187 bfmBAB; 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D I601_2881 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D I601_1186 pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D I601_0223 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2882 pdhD_2; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_1185 pdhD_1; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_0767 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D I601_0768 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D I601_0646 S-(hydroxymethyl)mycothiol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D I601_0649 frmA; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D I601_3225 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_1554 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D I601_1815 sucD_3; Succinyl-CoA ligase [ADP-forming] subunit alpha K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D I601_3045 galM; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D I601_1018 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I601_1411 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:ndk00020]
D I601_1957 aarA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D I601_0696 citA; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D I601_3569 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D I601_0262 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D I601_3950 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D I601_0223 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2882 pdhD_2; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_1185 pdhD_1; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_0767 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D I601_0768 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D I601_0276 sucD_1; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D I601_0277 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D I601_0253 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D I601_0254 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D I601_0252 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D I601_2041 fumA; Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D I601_2038 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D I601_0266 mdh_1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D I601_0196 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D I601_1411 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D I601_3716 aceE_3; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D I601_0379 aceE_1; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D I601_2088 aceE_2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D I601_1188 pdhA; Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D I601_1187 bfmBAB; 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D I601_2881 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D I601_1186 pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ndk00030]
D I601_3426 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I601_1067 zwf_1; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D I601_1210 zwf_2; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D I601_3427 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D I601_1275 gntZ; 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D I601_0509 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D I601_3034 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D I601_3424 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D I601_3425 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D I601_2377 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D I601_0231 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D I601_1018 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I601_0364 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D I601_3765 gntK; Thermoresistant gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D I601_2768 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D I601_0928 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D I601_2060 glpX_2; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D I601_1285 glpX_1; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D I601_2693 pfkA1; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:ndk00040]
D I601_0667 putative uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D I601_3034 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D I601_4066 tdh_2; L-threonine 3-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D I601_0538 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:ndk00051]
D I601_0441 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D I601_1776 algA; Alginate biosynthesis protein AlgA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I601_0146 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D I601_0229 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D I601_0155 rfbM; Mannose-1-phosphate guanylyltransferase RfbM K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D I601_1737 gmd_1; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D I601_1782 gmd_2; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D I601_0538 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D I601_2693 pfkA1; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D I601_2060 glpX_2; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D I601_1285 glpX_1; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D I601_4063 lacC; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D I601_4066 tdh_2; L-threonine 3-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D I601_0111 algD; GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D I601_2768 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D I601_0928 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D I601_3431 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D I601_2377 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D I601_2619 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D I601_4067 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:ndk00052]
D I601_3045 galM; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D I601_3353 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D I601_2784 galE_2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I601_1356 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I601_0820 galE_1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I601_0667 putative uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D I601_1018 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I601_2681 glkA_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I601_2682 glkA_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I601_0161 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D I601_2693 pfkA1; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D I601_1868 malZ; Maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D I601_0686 malL; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:ndk00500]
D I601_1868 malZ; Maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D I601_0686 malL; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D I601_0667 putative uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D I601_2806 bglA_2; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D I601_1140 bglA_1; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D I601_0187 cenA_1; Endoglucanase A precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D I601_1207 cenA_2; Endoglucanase A precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D I601_0711 egl; Endoglucanase precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D I601_0096 rfbF; Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D I601_0411 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D I601_3880 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D I601_3875 malP; Maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D I601_3878 treS; Trehalose synthase/amylase TreS K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D I601_3879 mak; Maltokinase K16146 pep2; maltokinase [EC:2.7.1.175]
D I601_3877 glgE1; Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1 K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D I601_0412 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D I601_3874 glgX_2; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D I601_1482 glgX_1; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D I601_1481 treY; Maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D I601_1480 treZ; Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D I601_0533 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D I601_0529 putative glycosyl hydrolase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D I601_2439 treP; Alpha,alpha-trehalose phosphorylase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D I601_1018 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I601_2681 glkA_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I601_2682 glkA_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I601_3426 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I601_0441 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ndk00520]
D I601_3614 ybbD; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D I601_3647 Beta-hexosaminidase A precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D I601_0441 kdgK; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D I601_1965 glmS_2; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D I601_1197 glmS_1; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D I601_1960 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D I601_0365 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D I601_3289 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D I601_0745 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D I601_1771 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-D-glucuronate N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D I601_1753 capD; UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D I601_2681 glkA_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I601_2682 glkA_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I601_1018 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I601_0667 putative uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D I601_3353 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D I601_2784 galE_2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I601_1356 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I601_0820 galE_1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I601_0161 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D I601_3426 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I601_1776 algA; Alginate biosynthesis protein AlgA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I601_0146 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D I601_0229 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D I601_0155 rfbM; Mannose-1-phosphate guanylyltransferase RfbM K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D I601_1737 gmd_1; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D I601_1782 gmd_2; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D I601_0111 algD; GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D I601_0096 rfbF; Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D I601_0091 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D I601_0599 arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D I601_0411 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ndk00620]
D I601_1554 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D I601_0767 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D I601_0768 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D I601_3716 aceE_3; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D I601_0379 aceE_1; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D I601_2088 aceE_2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D I601_1188 pdhA; Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D I601_1187 bfmBAB; 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D I601_2881 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D I601_1186 pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D I601_0223 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2882 pdhD_2; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_1185 pdhD_1; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_3472 mhpF_2; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D I601_0558 mhpF_1; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D I601_3225 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D I601_0646 S-(hydroxymethyl)mycothiol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D I601_0649 frmA; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D I601_3679 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D I601_1405 Biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D I601_0193 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D I601_3723 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_1815 sucD_3; Succinyl-CoA ligase [ADP-forming] subunit alpha K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D I601_3193 ydaP; Putative thiamine pyrophosphate-containing protein YdaP K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D I601_1194 lldD_1; L-lactate dehydrogenase [cytochrome] K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D I601_3823 poxB; Pyruvate dehydrogenase [ubiquinone] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D I601_3983 Lactate 2-monooxygenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4]
D I601_1195 putative FAD-linked oxidoreductase K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D I601_2977 putative metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D I601_4018 blh; Beta-lactamase hydrolase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D I601_1335 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D I601_3957 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D I601_0196 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D I601_0266 mdh_1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D I601_2041 fumA; Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D I601_2038 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D I601_1449 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D I601_1411 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D I601_1284 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D I601_1636 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D I601_3459 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3463 fadA_5; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3532 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1116 fadA_3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1183 bktB_2; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0593 fadA_1; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0597 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0615 pcaF_1; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_2361 fadA_4; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0654 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3772 leuA_2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D I601_2469 leuA_1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ndk00630]
D I601_1554 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D I601_0266 mdh_1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D I601_1957 aarA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D I601_0696 citA; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D I601_3569 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D I601_3459 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3463 fadA_5; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3532 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1116 fadA_3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1183 bktB_2; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0593 fadA_1; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0597 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0615 pcaF_1; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_2361 fadA_4; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0654 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3891 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D I601_3918 mutB_2; Methylmalonyl-CoA mutase large subunit K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D I601_0974 mcl1; Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D I601_0193 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D I601_0182 accD5_1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D I601_0183 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D I601_3723 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D I601_0249 mutB_1; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I601_0250 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I601_3861 putative FAD-linked oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D I601_3370 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D I601_2790 glnA_1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I601_2869 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I601_3247 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D I601_2885 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D I601_0223 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2882 pdhD_2; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_1185 pdhD_1; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_3242 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D I601_2642 garK; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D I601_1425 ttuC'; putative tartrate dehydrogenase/decarboxylase TtuC' K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D I601_3950 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D I601_3992 fdhA_2; Formate dehydrogenase subunit alpha precursor K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D I601_3993 fdhA_3; Formate dehydrogenase subunit alpha precursor K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D I601_3991 fdnH; Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D I601_2949 amdA; Acetamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00640 Propanoate metabolism [PATH:ndk00640]
D I601_1554 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D I601_1815 sucD_3; Succinyl-CoA ligase [ADP-forming] subunit alpha K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D I601_1053 bkdA; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D I601_1052 bkdB; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D I601_1051 pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D I601_0223 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2882 pdhD_2; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_1185 pdhD_1; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_1658 Acyl-CoA dehydrogenase, short-chain specific K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D I601_3873 echA8_3; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D I601_1115 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D I601_1405 Biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D I601_0193 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D I601_3723 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D I601_2590 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_2861 davT_2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_0182 accD5_1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D I601_0183 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D I601_3891 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D I601_0249 mutB_1; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I601_0250 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I601_0277 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D I601_0276 sucD_1; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D I601_1421 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00650 Butanoate metabolism [PATH:ndk00650]
D I601_3459 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3463 fadA_5; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3532 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1116 fadA_3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1183 bktB_2; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0593 fadA_1; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0597 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0615 pcaF_1; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_2361 fadA_4; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0654 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3903 fadB2_2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I601_0852 fadB2_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I601_1115 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D I601_3873 echA8_3; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D I601_1787 menB_4; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D I601_3892 ccr_1; Crotonyl-CoA reductase K17829 ccrA; crotonyl-CoA reductase [EC:1.3.1.86]
D I601_3472 mhpF_2; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D I601_0558 mhpF_1; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D I601_2077 phbC_2; Poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D I601_0534 phbC_1; Poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D I601_2227 Esterase PHB depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D I601_1425 ttuC'; putative tartrate dehydrogenase/decarboxylase TtuC' K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D I601_0253 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D I601_0254 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D I601_0252 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D I601_2590 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_2861 davT_2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_0324 gabD2_1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_1157 gabD_1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_2862 gabD_2; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_0545 gabD2_2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_1601 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_0767 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D I601_0768 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D I601_1367 yngG; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D I601_2804 scoA; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D I601_2805 scoB; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D I601_2803 bdhA; D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D I601_2091 mmoX; Methane monooxygenase component A alpha chain K18223 prmA; propane 2-monooxygenase large subunit [EC:1.14.13.227]
D I601_2093 mmoY; Methane monooxygenase component A beta chain K18224 prmC; propane 2-monooxygenase small subunit [EC:1.14.13.227]
D I601_2094 MmoB/DmpM family protein K18226 prmD; propane monooxygenase coupling protein
D I601_2092 mmoC; Methane monooxygenase component C K18225 prmB; propane monooxygenase reductase component [EC:1.18.1.-]
D I601_2097 Alcohol dehydrogenase K18382 adh1; NAD+-dependent secondary alcohol dehydrogenase Adh1 [EC:1.1.1.-]
D I601_1817 aruI; putative 2-ketoarginine decarboxylase AruI K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I601_2448 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I601_2449 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D I601_1869 xecD_3; 2-(R)-hydroxypropyl-CoM dehydrogenase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:ndk00660]
D I601_1817 aruI; putative 2-ketoarginine decarboxylase AruI K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I601_2448 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I601_2449 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D I601_0277 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D I601_0276 sucD_1; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D I601_0974 mcl1; Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D I601_2491 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D I601_2492 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D I601_2466 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ndk00562]
D I601_3593 suhB_2; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D I601_1251 ino1; Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D I601_1421 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D I601_3431 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ndk00190]
D I601_4030 ndhC_3; NAD(P)H-quinone oxidoreductase subunit 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D I601_0785 ndhC_1; NAD(P)H-quinone oxidoreductase subunit 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D I601_0784 nqo6; NADH-quinone oxidoreductase subunit 6 K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D I601_0783 nuoC1; NADH-quinone oxidoreductase subunit C 1 K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D I601_0782 nqo4; NADH-quinone oxidoreductase subunit 4 K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D I601_0781 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D I601_0780 nqo1; NADH-quinone oxidoreductase chain 1 K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D I601_0779 nqo3; NADH-quinone oxidoreductase chain 3 K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D I601_3180 nuoH_1; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D I601_4032 nuoH_2; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D I601_0778 nqo8; NADH-quinone oxidoreductase subunit 8 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D I601_0777 nqo9; NADH-quinone oxidoreductase subunit 9 K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D I601_0776 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D I601_3181 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D I601_0775 NADH-quinone oxidoreductase subunit 11 K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D I601_0774 NADH-quinone oxidoreductase subunit 12 K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D I601_3183 NADH-quinone oxidoreductase subunit 12 K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D I601_4035 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D I601_3184 ndhD1_2; NAD(P)H-quinone oxidoreductase chain 4 1 K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D I601_4036 ndhD1_3; NAD(P)H-quinone oxidoreductase chain 4 1 K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D I601_0773 ndhD1_1; NAD(P)H-quinone oxidoreductase chain 4 1 K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D I601_3185 nuoN_2; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D I601_4037 nuoN_3; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D I601_0772 nuoN_1; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D I601_3178 ndhC_2; NAD(P)H-quinone oxidoreductase subunit 3 K05574 ndhC; NAD(P)H-quinone oxidoreductase subunit 3 [EC:7.1.1.2]
D I601_3182 nuoK; NADH-quinone oxidoreductase subunit K K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D I601_4034 NADH:ubiquinone oxidoreductase subunit K K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D I601_0856 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D I601_0253 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D I601_0254 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D I601_0252 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D I601_2654 aioB; Arsenite oxidase subunit AioB precursor K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D I601_2653 petB; Cytochrome b6 K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D I601_2655 qcrC; Menaquinol-cytochrome c reductase cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D I601_3423 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D I601_2650 ctaF; Cytochrome c oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D I601_2656 ctaE; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D I601_2649 ctaD; Cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D I601_2648 ctaC; Cytochrome c oxidase subunit 2 precursor K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D I601_3422 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D I601_2838 hypothetical protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D I601_2839 Cytochrome C oxidase, mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D I601_1120 ythA_1; Putative cytochrome bd menaquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D I601_4086 ythA_2; Putative cytochrome bd menaquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D I601_1119 appB; Cytochrome bd-II ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D I601_4087 Cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D I601_3926 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D I601_3924 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D I601_3925 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D I601_3927 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D I601_3923 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D I601_3930 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D I601_3928 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D I601_3929 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D I601_1351 ppa_1; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D I601_1659 ppa_2; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D I601_1712 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D I601_4057 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:ndk00680]
D I601_3213 fdhA_1; Glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D I601_0646 S-(hydroxymethyl)mycothiol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D I601_0649 frmA; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D I601_3992 fdhA_2; Formate dehydrogenase subunit alpha precursor K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D I601_3993 fdhA_3; Formate dehydrogenase subunit alpha precursor K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D I601_3991 fdnH; Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D I601_1976 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I601_1449 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D I601_0266 mdh_1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D I601_0974 mcl1; Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D I601_2768 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D I601_0928 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D I601_2060 glpX_2; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D I601_1285 glpX_1; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D I601_2693 pfkA1; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D I601_3217 Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase K00320 mer; 5,10-methylenetetrahydromethanopterin reductase [EC:1.5.98.2]
D I601_1554 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D I601_1636 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D I601_1846 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I601_3273 pspB; Putative phosphoserine phosphatase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I601_0499 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I601_0701 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D I601_3380 serB_2; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D I601_3277 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D I601_0314 mqnE; Aminodeoxyfutalosine synthase K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32]
D I601_2494 cofC_1; 2-phospho-L-lactate guanylyltransferase K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D I601_0152 cofD; 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D I601_0153 fbiB; Coenzyme F420:L-glutamate ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:ndk00910]
D I601_2949 amdA; Acetamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D I601_3632 narK; Nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D I601_3633 narT; putative nitrate transporter NarT K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D I601_3631 narG; Nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D I601_3630 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D I601_3628 narX_1; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D I601_2201 gdhB_2; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D I601_1826 gdhA_1; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D I601_2309 gdhA_2; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D I601_2790 glnA_1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I601_2869 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I601_3681 gltB_2; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D I601_3680 gltB_1; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D I601_2950 arcC1_2; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D I601_1319 arcC1_1; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D I601_3613 mtcA1; Beta-carbonic anhydrase 1 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ndk00920]
D I601_3366 ssuE; FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38]
D I601_1772 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D I601_1773 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D I601_0356 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D I601_2928 cysH; Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D I601_2930 sir; Sulfite reductase [ferredoxin] K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D I601_1029 Pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D I601_1998 hypothetical protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D I601_1741 cysA_3; Putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D I601_3600 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D I601_1749 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D I601_2022 metB_1; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D I601_2500 metB_2; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ndk00061]
D I601_1405 Biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D I601_0193 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D I601_3723 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D I601_3721 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D I601_3719 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D I601_3720 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D I601_3722 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I601_3533 fabG_10; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_0591 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_2288 novJ; Short-chain reductase protein NovJ K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_0617 fabG3_1; 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_3219 fabG_9; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_3387 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_1166 fabL; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabL K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D I601_2941 desA1; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D I601_0903 lcfB_3; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_2677 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_3810 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_0815 lcfB_2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_3650 yhfT; putative acyl--CoA ligase YhfT K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ndk00071]
D I601_3459 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3463 fadA_5; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3532 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1116 fadA_3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1183 bktB_2; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0593 fadA_1; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0597 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0615 pcaF_1; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_2361 fadA_4; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0654 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3540 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D I601_1115 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D I601_3873 echA8_3; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D I601_1658 Acyl-CoA dehydrogenase, short-chain specific K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D I601_2575 bbsG_3; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D I601_1096 mmgC_10; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D I601_1161 bbsG_2; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D I601_0429 bbsG_1; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D I601_3358 acrC_1; Acryloyl-CoA reductase (NADH) K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D I601_1814 acdA_7; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D I601_0312 mmgC_2; Acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D I601_2075 mmgC_12; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D I601_0903 lcfB_3; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_2677 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_3810 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_0815 lcfB_2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_3650 yhfT; putative acyl--CoA ligase YhfT K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_1337 alkB; Alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D I601_1173 thcD; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D I601_3166 camA_2; Putidaredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D I601_1935 camA_1; Putidaredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D I601_0646 S-(hydroxymethyl)mycothiol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D I601_0649 frmA; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D I601_3225 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
D I601_3708 serB_3; Phosphoserine phosphatase K13356 FAR; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84]
C 00100 Steroid biosynthesis [PATH:ndk00100]
D I601_4050 rebM_4; Demethylrebeccamycin-D-glucose O-methyltransferase K00559 SMT1; sterol 24-C-methyltransferase [EC:2.1.1.41]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:ndk00121]
D I601_1650 rhlG; Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ndk00561]
D I601_2642 garK; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_2552 glpK_1; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D I601_2690 glpK_2; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D I601_3072 yutF; putative hydrolase YutF K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D I601_0071 plsC_1; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I601_2685 plsC_4; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I601_3095 plsC_5; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I601_3705 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I601_0924 ytlR; Putative lipid kinase YtlR K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D I601_1147 dagK_1; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D I601_3488 Putative diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D I601_0404 tgs2; putative diacylglycerol O-acyltransferase tgs2 K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D I601_2193 Putative diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D I601_2108 Putative diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D I601_1793 estB; Extracellular esterase EstB precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D I601_2059 Alpha/beta hydrolase family protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:ndk00564]
D I601_2496 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D I601_2553 glpD_2; Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D I601_1150 glpD_1; Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D I601_0071 plsC_1; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I601_2685 plsC_4; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I601_3095 plsC_5; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I601_3705 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I601_0924 ytlR; Putative lipid kinase YtlR K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D I601_1147 dagK_1; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D I601_0288 glpQ; Glycerophosphoryl diester phosphodiesterase precursor K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D I601_1130 ugpQ_1; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D I601_1379 glpQ1; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D I601_3290 ugpQ_2; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D I601_3371 cytoplasmic glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D I601_3986 tagD; Glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
D I601_2548 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D I601_2899 pgsA2_1; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D I601_2963 pgsA; CDP-diacylglycerol--inositol 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D I601_3521 cls; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D I601_3238 pgsA2_2; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
D I601_1148 putative FAD-linked oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
C 00600 Sphingolipid metabolism [PATH:ndk00600]
D I601_0536 gadB; Glutamate decarboxylase K01634 SGPL1; sphinganine-1-phosphate aldolase [EC:4.1.2.27]
D I601_1508 hypothetical protein K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:ndk00592]
D I601_1658 Acyl-CoA dehydrogenase, short-chain specific K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D I601_3540 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ndk01040]
D I601_2941 desA1; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D I601_0381 desA3_1; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D I601_1023 desA3_2; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D I601_1024 Stearoyl-CoA 9-desaturase electron transfer partner K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D I601_0382 Stearoyl-CoA 9-desaturase electron transfer partner K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D I601_1658 Acyl-CoA dehydrogenase, short-chain specific K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D I601_3537 tesB_1; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D I601_3538 tesB_2; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ndk00230]
D I601_1018 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I601_0364 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D I601_0883 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D I601_0922 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D I601_0271 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D I601_0896 purL; Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D I601_0900 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D I601_0899 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D I601_0882 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D I601_0177 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D I601_0176 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D I601_0905 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D I601_0921 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D I601_0270 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D I601_2974 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D I601_2900 yhcR; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D I601_2901 Endonuclease/Exonuclease/phosphatase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D I601_2212 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D I601_0225 punA; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D I601_2736 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D I601_1665 hpt; Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D I601_0331 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D I601_0333 guaB_1; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D I601_2394 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D I601_2320 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D I601_0322 guaA_1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D I601_1128 guaA_2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D I601_2791 guaA_3; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D I601_3351 guaB_2; Inosine-5'-monophosphate dehydrogenase K26110 guaB1; GMP reductase [EC:1.7.1.7]
D I601_3023 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D I601_1914 nrdJ; Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D I601_3747 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D I601_2975 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D I601_1979 gppA; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D I601_0832 ppx; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D I601_0179 pH-sensitive adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D I601_1381 pH-sensitive adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D I601_0923 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D I601_2645 adoK; Adenosine kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D I601_0237 Adenine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D I601_0743 add2_1; Aminodeoxyfutalosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D I601_0453 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D I601_0763 cpdA; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D I601_2962 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D I601_1772 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D I601_1773 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D I601_2116 allB; Allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D I601_2950 arcC1_2; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D I601_1319 arcC1_1; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:ndk00240]
D I601_3016 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D I601_3015 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D I601_3007 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D I601_3008 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D I601_3019 pyrD_2; Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D I601_3018 pyrK; Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D I601_3017 pyrD_1; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D I601_0937 pyrE_2; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D I601_3020 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D I601_2546 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D I601_2394 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D I601_0188 maf; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D I601_3079 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D I601_3094 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D I601_0234 udk; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D I601_2900 yhcR; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D I601_2901 Endonuclease/Exonuclease/phosphatase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D I601_2212 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D I601_1491 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D I601_3006 pyrR; Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D I601_0241 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D I601_0320 tadA_1; tRNA-specific adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D I601_0988 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D I601_1914 nrdJ; Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D I601_1584 tmk_1; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D I601_3589 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D I601_0240 pdp; Pyrimidine-nucleoside phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D I601_3601 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D I601_2889 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D I601_0967 amaB; N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D I601_1320 bar; Barbiturase K19794 bar; barbiturase [EC:3.5.2.1]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ndk00250]
D I601_1684 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D I601_0109 asnB; Asparagine synthetase [glutamine-hydrolyzing] 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D I601_3081 ald_3; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D I601_3063 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D I601_3065 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D I601_0923 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D I601_0921 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D I601_3007 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D I601_2590 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_2861 davT_2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_0324 gabD2_1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_1157 gabD_1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_2862 gabD_2; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_0545 gabD2_2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_1601 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_3681 gltB_2; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D I601_3680 gltB_1; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D I601_2201 gdhB_2; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D I601_1826 gdhA_1; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D I601_2309 gdhA_2; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D I601_2195 rocA1; 1-pyrroline-5-carboxylate dehydrogenase 1 K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D I601_2790 glnA_1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I601_2869 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I601_3016 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D I601_3015 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D I601_1229 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D I601_0899 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D I601_1965 glmS_2; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D I601_1197 glmS_1; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D I601_0883 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ndk00260]
D I601_1530 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I601_1531 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D I601_3943 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D I601_3941 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D I601_0528 thrC_1; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D I601_3942 thrC_2; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D I601_2698 ltaA; L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D I601_2642 garK; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D I601_1846 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I601_3273 pspB; Putative phosphoserine phosphatase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I601_0499 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I601_0701 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D I601_3380 serB_2; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D I601_2810 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D I601_0540 puo_1; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D I601_3247 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D I601_2885 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D I601_0223 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2882 pdhD_2; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_1185 pdhD_1; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_3242 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D I601_0282 gbsA; Betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D I601_2587 prr; Gamma-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D I601_2559 nagG; Salicylate 5-hydroxylase, large oxygenase component K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D I601_2560 Stearoyl-CoA 9-desaturase electron transfer partner K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D I601_1991 cbs; Putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D I601_2024 tdcB; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D I601_1458 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D I601_3684 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D I601_3685 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ndk00270]
D I601_1137 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D I601_1991 cbs; Putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D I601_3332 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D I601_3026 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D I601_2914 mtnP; S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D I601_2736 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D I601_0378 metC; Cystathionine beta-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D I601_2770 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D I601_0141 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D I601_1530 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I601_1531 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D I601_3943 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D I601_1749 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D I601_2022 metB_1; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D I601_2500 metB_2; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D I601_1748 mdeA; Methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D I601_2945 dat; D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I601_2467 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I601_1741 cysA_3; Putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D I601_3600 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D I601_0266 mdh_1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D I601_0499 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I601_0701 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ndk00280]
D I601_2945 dat; D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I601_2467 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I601_0879 vdh; Valine dehydrogenase K00271 vdh; valine dehydrogenase (NAD+) [EC:1.4.1.23]
D I601_1053 bkdA; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D I601_1052 bkdB; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D I601_1051 pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D I601_0223 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2882 pdhD_2; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_1185 pdhD_1; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2575 bbsG_3; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D I601_1096 mmgC_10; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D I601_1161 bbsG_2; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D I601_0429 bbsG_1; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D I601_3358 acrC_1; Acryloyl-CoA reductase (NADH) K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D I601_1814 acdA_7; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D I601_0190 acdA_1; Acyl-CoA dehydrogenase K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D I601_3873 echA8_3; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D I601_1115 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D I601_3540 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D I601_0193 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D I601_0182 accD5_1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D I601_0183 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D I601_3723 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D I601_3891 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D I601_0249 mutB_1; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I601_0250 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I601_1421 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_2590 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_2861 davT_2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_1365 Methylmalonyl-CoA carboxyltransferase 12S subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D I601_1367 yngG; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D I601_2804 scoA; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D I601_2805 scoB; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D I601_3459 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3463 fadA_5; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3532 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1116 fadA_3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1183 bktB_2; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0593 fadA_1; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0597 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0615 pcaF_1; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_2361 fadA_4; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0654 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ndk00290]
D I601_2024 tdcB; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D I601_1458 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D I601_2491 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D I601_2492 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D I601_2466 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D I601_1817 aruI; putative 2-ketoarginine decarboxylase AruI K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I601_2448 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I601_2449 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D I601_2450 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D I601_2441 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D I601_2945 dat; D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I601_2467 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I601_3772 leuA_2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D I601_2469 leuA_1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ndk00300]
D I601_3943 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D I601_1530 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I601_1531 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D I601_2894 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D I601_2626 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D I601_2162 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D I601_3060 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D I601_0938 dapC; putative N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D I601_2175 dapE_3; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D I601_1898 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D I601_3944 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D I601_1263 lysN_1; 2-aminoadipate transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D I601_2729 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D I601_2501 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ndk00310]
D I601_0223 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2882 pdhD_2; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_1185 pdhD_1; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2075 mmgC_12; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D I601_3873 echA8_3; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D I601_1115 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D I601_3459 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3463 fadA_5; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3532 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1116 fadA_3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1183 bktB_2; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0593 fadA_1; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0597 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0615 pcaF_1; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_2361 fadA_4; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0654 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_2590 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_2861 davT_2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_0324 gabD2_1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_1157 gabD_1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_2862 gabD_2; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_0545 gabD2_2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_1601 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_3302 kamA; L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:ndk00220]
D I601_2951 argF_1; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D I601_3061 argF_2; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D I601_3063 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D I601_3065 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D I601_2952 arcA_2; Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D I601_1383 arcA_1; Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D I601_1229 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D I601_0899 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D I601_2790 glnA_1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I601_2869 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I601_3016 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D I601_3015 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D I601_2950 arcC1_2; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D I601_1319 arcC1_1; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D I601_2201 gdhB_2; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D I601_1826 gdhA_1; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D I601_2309 gdhA_2; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D I601_3058 argJ; Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D I601_2152 Acetyltransferase (GNAT) family protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D I601_3059 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D I601_3057 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D I601_3060 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:ndk00330]
D I601_0320 tadA_1; tRNA-specific adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D I601_1316 apc3; Acetophenone carboxylase gamma subunit K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D I601_1317 apc4; Acetophenone carboxylase delta subunit K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D I601_2214 pyruvoyl-dependent arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_2810 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D I601_0540 puo_1; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D I601_1315 aam_1; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_0563 nylA_1; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_0752 nylA_2; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_2472 nylA_4; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_1975 nylA_3; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_2135 gatA_1; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_0396 rocD; Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D I601_0827 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D I601_0828 fadM; Proline dehydrogenase 1 K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D I601_2195 rocA1; 1-pyrroline-5-carboxylate dehydrogenase 1 K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D I601_2410 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D I601_3867 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:ndk00340]
D I601_3043 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D I601_3042 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D I601_3692 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D I601_2755 priA_1; Phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D I601_2753 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D I601_2756 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D I601_2752 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D I601_1058 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I601_2751 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I601_3976 hisN; Histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D I601_2750 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D I601_0630 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D I601_0629 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D I601_0965 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_2810 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D I601_0540 puo_1; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D I601_1452 egtD; Histidine-specific methyltransferase EgtD K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:ndk00350]
D I601_1058 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I601_2751 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I601_2298 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D I601_0758 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D I601_0760 Fumarylacetoacetate (FAA) hydrolase family protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D I601_2810 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D I601_0540 puo_1; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D I601_0646 S-(hydroxymethyl)mycothiol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D I601_0649 frmA; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D I601_3225 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D I601_0324 gabD2_1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_1157 gabD_1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_2862 gabD_2; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_0545 gabD2_2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_1601 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_2389 xylB; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00360 Phenylalanine metabolism [PATH:ndk00360]
D I601_2810 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D I601_0540 puo_1; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D I601_1621 paaA; 1,2-phenylacetyl-CoA epoxidase, subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D I601_1622 paaB; 1,2-phenylacetyl-CoA epoxidase, subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D I601_1623 paaC; 1,2-phenylacetyl-CoA epoxidase, subunit C K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D I601_1624 paaD; Putative 1,2-phenylacetyl-CoA epoxidase, subunit D K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D I601_1625 paaE_1; 1,2-phenylacetyl-CoA epoxidase, subunit E K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D I601_2179 paaG_2; 1,2-epoxyphenylacetyl-CoA isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D I601_3297 paaF_1; 2,3-dehydroadipyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D I601_3873 echA8_3; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D I601_3903 fadB2_2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I601_0852 fadB2_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I601_1058 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I601_2751 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I601_2389 xylB; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D I601_2298 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D I601_0870 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D I601_3255 katG; Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D I601_1315 aam_1; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_0563 nylA_1; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_0752 nylA_2; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_2472 nylA_4; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_1975 nylA_3; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_2135 gatA_1; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_3414 andAb; Anthranilate 1,2-dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D I601_1173 thcD; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D I601_3166 camA_2; Putidaredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D I601_1935 camA_1; Putidaredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D I601_0559 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D I601_3471 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D I601_0557 mhpE; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D I601_3472 mhpF_2; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D I601_0558 mhpF_1; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00380 Tryptophan metabolism [PATH:ndk00380]
D I601_2200 kynA; Tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D I601_2443 kynU; Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D I601_0223 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2882 pdhD_2; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_1185 pdhD_1; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2075 mmgC_12; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D I601_3873 echA8_3; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D I601_1115 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D I601_3459 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3463 fadA_5; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3532 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1116 fadA_3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1183 bktB_2; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0593 fadA_1; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0597 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0615 pcaF_1; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_2361 fadA_4; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0654 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_2810 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D I601_0540 puo_1; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_1315 aam_1; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_0563 nylA_1; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_0752 nylA_2; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_2472 nylA_4; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_1975 nylA_3; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_2135 gatA_1; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_3370 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D I601_3255 katG; Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ndk00400]
D I601_2697 aroH_1; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D I601_2702 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D I601_2995 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D I601_2996 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D I601_2994 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D I601_3974 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D I601_2993 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D I601_1069 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D I601_2659 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D I601_2755 priA_1; Phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D I601_3686 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D I601_3684 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D I601_3685 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D I601_3092 aroH_2; Chorismate mutase AroH K06208 aroH; chorismate mutase [EC:5.4.99.5]
D I601_3093 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D I601_1388 pheA; P-protein K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D I601_1058 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I601_2751 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ndk00410]
D I601_1683 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D I601_2590 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_2861 davT_2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_1422 tpa_1; Taurine--pyruvate aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_1682 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D I601_0967 amaB; N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D I601_3873 echA8_3; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D I601_1115 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D I601_1658 Acyl-CoA dehydrogenase, short-chain specific K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D I601_1421 mmsA; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:ndk00430]
D I601_1895 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D I601_3081 ald_3; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D I601_1422 tpa_1; Taurine--pyruvate aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D I601_2201 gdhB_2; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
D I601_3986 tagD; Glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
C 00450 Selenocompound metabolism [PATH:ndk00450]
D I601_2022 metB_1; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D I601_2500 metB_2; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D I601_1137 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D I601_3332 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D I601_0378 metC; Cystathionine beta-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D I601_3412 csd; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D I601_1260 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D I601_1772 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D I601_1773 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D I601_3989 selD; Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D I601_3995 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D I601_2374 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ndk00460]
D I601_2806 bglA_2; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D I601_1140 bglA_1; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D I601_1895 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D I601_2949 amdA; Acetamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:ndk00470]
D I601_1969 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D I601_2502 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I601_2503 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I601_1229 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D I601_0899 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D I601_2314 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D I601_2731 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D I601_1898 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D I601_3944 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D I601_0870 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:ndk00480]
D I601_1895 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D I601_3644 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D I601_2884 pepA_2; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D I601_2181 pepA_1; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D I601_0363 pepN_1; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D I601_2369 pepN_6; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D I601_3257 pepN_7; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D I601_3579 gor; Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D I601_0262 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D I601_1275 gntZ; 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D I601_0509 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D I601_1067 zwf_1; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D I601_1210 zwf_2; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D I601_1331 gpx1_1; Hydroperoxy fatty acid reductase gpx1 K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D I601_1358 gpx1_2; Hydroperoxy fatty acid reductase gpx1 K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:ndk00515]
D I601_0548 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:ndk00514]
D I601_0548 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D I601_1508 hypothetical protein K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:ndk00542]
D I601_3933 wecA_2; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ndk00541]
D I601_0667 putative uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D I601_2784 galE_2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I601_1356 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I601_0820 galE_1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I601_0161 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D I601_0098 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D I601_0096 rfbF; Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D I601_0091 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D I601_0599 arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D I601_1776 algA; Alginate biosynthesis protein AlgA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I601_0146 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D I601_0229 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D I601_0155 rfbM; Mannose-1-phosphate guanylyltransferase RfbM K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D I601_1737 gmd_1; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D I601_1782 gmd_2; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D I601_0365 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D I601_1753 capD; UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D I601_1757 NAD dependent epimerase/dehydratase family protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D I601_1758 wbpI; UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D I601_1771 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-D-glucuronate N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:ndk00550]
D I601_3289 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D I601_0745 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D I601_2734 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D I601_2731 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D I601_2729 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D I601_2502 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I601_2503 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I601_2501 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D I601_3767 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D I601_3341 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I601_2730 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D I601_2733 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D I601_2398 spoVD; Stage V sporulation protein D K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D I601_2728 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D I601_1298 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D I601_1660 dacC; D-alanyl-D-alanine carboxypeptidase DacC precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D I601_4107 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:ndk00552]
D I601_3341 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I601_3933 wecA_2; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D I601_3948 ywtF; Putative transcriptional regulator YwtF K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D I601_0166 brpA_1; Biofilm regulatory protein A precursor K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D I601_3735 brpA_3; Biofilm regulatory protein A precursor K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ndk00543]
D I601_3933 wecA_2; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D I601_0184 icaA; Poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ndk00730]
D I601_2052 thiC; Phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D I601_2051 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D I601_2647 iscS_2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I601_2414 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I601_2047 thiO; Glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D I601_3543 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D I601_2049 thiG; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D I601_2046 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D I601_2050 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D I601_2506 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D I601_3975 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D I601_0453 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ndk00740]
D I601_3038 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D I601_3036 ribD_2; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D I601_3039 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D I601_3037 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D I601_2613 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D I601_3366 ssuE; FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38]
D I601_3845 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
C 00750 Vitamin B6 metabolism [PATH:ndk00750]
D I601_0695 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D I601_0547 pdxY; Pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D I601_0701 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D I601_0528 thrC_1; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D I601_3942 thrC_2; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D I601_2964 pdxS; Pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D I601_2966 pdxT; Glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ndk00760]
D I601_1684 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D I601_2640 nadA; Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D I601_1685 nadC; Nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D I601_2306 pncB1; Nicotinate phosphoribosyltransferase pncB1 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D I601_0225 punA; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D I601_2900 yhcR; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D I601_2901 Endonuclease/Exonuclease/phosphatase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D I601_2212 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D I601_3865 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D I601_0064 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D I601_2785 nadE; Glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D I601_2903 cinA; Putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D I601_2305 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D I601_1476 cobB_2; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D I601_3075 ppnK; Inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D I601_1486 pntAA; NAD(P) transhydrogenase subunit alpha part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D I601_1487 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D I601_1488 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D I601_0324 gabD2_1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_1157 gabD_1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_2862 gabD_2; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_0545 gabD2_2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I601_1601 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ndk00770]
D I601_1817 aruI; putative 2-ketoarginine decarboxylase AruI K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I601_2448 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I601_2449 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D I601_2450 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D I601_2441 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D I601_2781 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D I601_1682 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D I601_1964 coaA_2; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D I601_1686 coaX; Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D I601_3025 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D I601_2511 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D I601_3648 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D I601_1966 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D I601_2945 dat; D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I601_2467 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I601_0967 amaB; N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D I601_1683 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:ndk00780]
D I601_3722 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I601_3533 fabG_10; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_0591 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_2288 novJ; Short-chain reductase protein NovJ K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_0617 fabG3_1; 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_3219 fabG_9; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_3387 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_0181 birA_1; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ndk00785]
D I601_2876 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D I601_2873 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D I601_0223 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2882 pdhD_2; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_1185 pdhD_1; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_3716 aceE_3; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D I601_0379 aceE_1; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D I601_2088 aceE_2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D I601_1188 pdhA; Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D I601_1187 bfmBAB; 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D I601_2881 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D I601_1186 pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D I601_3950 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D I601_1053 bkdA; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D I601_1052 bkdB; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D I601_1051 pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D I601_3247 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D I601_2885 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D I601_3242 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ndk00790]
D I601_1936 folE_2; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D I601_1667 folE_1; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D I601_1909 pld; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D I601_1669 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D I601_1670 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D I601_2010 folP2; Inactive dihydropteroate synthase 2 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D I601_1668 folP1; Dihydropteroate synthase 1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D I601_2890 dhfrIII; Dihydrofolate reductase type 3 K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D I601_2390 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D I601_3038 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D I601_1068 pabB; Aminodeoxychorismate synthase component 1 K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D I601_2447 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D I601_3391 moaA; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D I601_0665 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D I601_0050 moaE1; Molybdopterin synthase catalytic subunit 1 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D I601_0666 moeA; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:ndk00670]
D I601_2890 dhfrIII; Dihydrofolate reductase type 3 K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D I601_0269 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D I601_0271 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D I601_0270 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D I601_3029 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D I601_2885 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D I601_3332 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D I601_2889 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D I601_2710 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D I601_0668 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ndk00860]
D I601_2483 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D I601_0812 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D I601_0092 kat; 3-aminobutyryl-CoA aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D I601_0807 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase 2 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D I601_0809 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D I601_0811 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D I601_0388 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D I601_0386 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D I601_3594 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D I601_0385 Chlorite dismutase precursor K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D I601_0810 nasF; Uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D I601_3364 sumT; Uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D I601_3423 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D I601_3422 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D I601_3839 cobI; Precorrin-2 C(20)-methyltransferase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
D I601_3837 ferredoxin-nitrite reductase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D I601_3842 cobM; Precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D I601_3855 precorrin 6A synthase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D I601_3852 cobK; Precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D I601_3843 cobL; Precorrin-6Y C(5,15)-methyltransferase [decarboxylating] K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D I601_3838 cobH; Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D I601_3847 cobB_3; Cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D I601_3856 cobN; Aerobic cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D I601_3920 Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D I601_3846 btuR; Cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D I601_3853 cobQ; Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D I601_3851 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D I601_3850 cobU; Bifunctional adenosylcobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D I601_3849 cobS; Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D I601_3848 cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D I601_3697 pspA_3; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D I601_3844 bchI; Magnesium-chelatase 38 kDa subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D I601_2004 Magnesium chelatase, subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D I601_4045 copA_2; Copper resistance protein A precursor K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ndk00130]
D I601_0786 ubiE_2; Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D I601_0788 dhbC; Isochorismate synthase DhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D I601_0794 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D I601_0795 fadK_1; Short-chain-fatty-acid--CoA ligase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D I601_1470 menB_3; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D I601_0797 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D I601_2348 add2_2; Aminodeoxyfutalosine deaminase K18286 add; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D I601_0792 qorB; Quinone oxidoreductase 2 K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D I601_2298 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ndk00900]
D I601_3543 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D I601_2595 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D I601_1851 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D I601_1876 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D I601_1852 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D I601_2598 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D I601_2069 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D I601_3459 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3463 fadA_5; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3532 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1116 fadA_3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1183 bktB_2; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0593 fadA_1; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0597 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0615 pcaF_1; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_2361 fadA_4; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0654 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3785 idi; Isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D I601_2709 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D I601_2034 (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D I601_3767 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:ndk00903]
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_1587 ephG; Epoxide hydrolase EphG K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8]
D I601_1653 mlhB_2; Monoterpene epsilon-lactone hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:ndk00907]
D I601_3873 echA8_3; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D I601_1115 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D I601_1367 yngG; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D I601_3540 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D I601_3424 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products [PATH:ndk01057]
D I601_2566 snaC; NADH:riboflavin 5'-phosphate oxidoreductase K14631 actVB; flavin reductase ActVB [EC:1.5.1.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ndk00523]
D I601_0098 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D I601_2915 wbiB; dTDP-L-rhamnose 4-epimerase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D I601_0788 dhbC; Isochorismate synthase DhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D I601_3731 lldD_2; L-lactate dehydrogenase [cytochrome] K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:ndk00946]
D I601_2806 bglA_2; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D I601_1140 bglA_1; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D I601_0669 quiP; Acyl-homoserine lactone acylase QuiP precursor K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:ndk00332]
D I601_2410 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D I601_3867 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ndk00261]
D I601_3731 lldD_2; L-lactate dehydrogenase [cytochrome] K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D I601_1772 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D I601_1773 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D I601_1530 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I601_1531 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D I601_2894 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D I601_2626 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ndk00521]
D I601_2681 glkA_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I601_2682 glkA_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I601_1018 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I601_1251 ino1; Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D I601_3593 suhB_2; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D I601_0098 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D I601_2681 glkA_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I601_2682 glkA_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:ndk00401]
D I601_3093 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D I601_1058 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I601_2751 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:ndk00405]
D I601_1070 phnA_1; Anthranilate synthase component 1, pyocyanine specific K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86]
D I601_1069 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D I601_3719 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D I601_3533 fabG_10; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_0591 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_2288 novJ; Short-chain reductase protein NovJ K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_0617 fabG3_1; 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_3219 fabG_9; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_3387 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D I601_3721 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ndk00999]
D I601_3026 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D I601_2806 bglA_2; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D I601_1140 bglA_1; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ndk00362]
D I601_1607 catD_1; 3-oxoadipate enol-lactonase 2 K14727 pcaL; 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44]
D I601_3540 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D I601_0559 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D I601_3471 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D I601_0557 mhpE; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D I601_3472 mhpF_2; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D I601_0558 mhpF_1; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D I601_1115 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D I601_2075 mmgC_12; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D I601_3873 echA8_3; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D I601_3903 fadB2_2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I601_0852 fadB2_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I601_3459 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3463 fadA_5; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3532 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1116 fadA_3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1183 bktB_2; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0593 fadA_1; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0597 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0615 pcaF_1; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_2361 fadA_4; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0654 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:ndk00627]
D I601_1127 ethA; FAD-containing monooxygenase EthA K10215 ethA; monooxygenase [EC:1.14.13.-]
D I601_1315 aam_1; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_0563 nylA_1; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_0752 nylA_2; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_2472 nylA_4; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_1975 nylA_3; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_2135 gatA_1; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_3873 echA8_3; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:ndk00625]
D I601_0825 dhmA_1; Haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D I601_3225 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D I601_0646 S-(hydroxymethyl)mycothiol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D I601_0649 frmA; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D I601_0647 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0325 geoB; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0232 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_0648 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I601_3213 fdhA_1; Glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D I601_1956 yihX; Alpha-D-glucose-1-phosphate phosphatase YihX K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D I601_2031 hdl_IVa_2; (S)-2-haloacid dehalogenase 4A K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ndk00361]
D I601_0825 dhmA_1; Haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D I601_1956 yihX; Alpha-D-glucose-1-phosphate phosphatase YihX K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D I601_2031 hdl_IVa_2; (S)-2-haloacid dehalogenase 4A K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
D I601_2389 xylB; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00622 Xylene degradation [PATH:ndk00622]
D I601_2389 xylB; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D I601_0559 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D I601_3471 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D I601_0557 mhpE; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D I601_3472 mhpF_2; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D I601_0558 mhpF_1; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00633 Nitrotoluene degradation [PATH:ndk00633]
D I601_2196 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D I601_3540 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:ndk00643]
D I601_0758 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D I601_0760 Fumarylacetoacetate (FAA) hydrolase family protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D I601_1315 aam_1; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_0563 nylA_1; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_0752 nylA_2; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_2472 nylA_4; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_1975 nylA_3; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I601_2135 gatA_1; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
D I601_2764 yecD; Isochorismatase family protein YecD K23359 biuH; biuret amidohydrolase [EC:3.5.1.84]
C 00930 Caprolactam degradation [PATH:ndk00930]
D I601_1337 alkB; Alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D I601_1653 mlhB_2; Monoterpene epsilon-lactone hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D I601_3873 echA8_3; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D I601_1115 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D I601_2859 nylB'; 6-aminohexanoate-dimer hydrolase K01453 nylB; 6-aminohexanoate-oligomer exohydrolase [EC:3.5.1.46]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:ndk00621]
D I601_0559 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D I601_3471 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D I601_0557 mhpE; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D I601_3472 mhpF_2; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D I601_0558 mhpF_1; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00626 Naphthalene degradation [PATH:ndk00626]
D I601_3225 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D I601_0646 S-(hydroxymethyl)mycothiol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D I601_0649 frmA; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
D I601_1311 kdhA; 6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha K16878 hmfB; 2-furoyl-CoA dehydrogenase FAD binding subunit [EC:1.3.99.8]
C 00984 Steroid degradation [PATH:ndk00984]
D I601_0323 choD; Cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D I601_3461 Steroid C26-monooxygenase K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D I601_3462 Steroid C26-monooxygenase K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D I601_3473 ksdD; 3-oxosteroid 1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D I601_0580 kstD_1; 3-oxosteroid 1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D I601_0607 kstD_2; 3-oxosteroid 1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D I601_3444 kshA_2; 3-ketosteroid-9-alpha-monooxygenase oxygenase subunit K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30]
D I601_0574 kshA_1; 3-ketosteroid-9-alpha-monooxygenase oxygenase subunit K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30]
D I601_3442 hmp_2; 3-ketosteroid-9-alpha-hydroxylase reductase subunit K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30]
D I601_3470 hsaA_2; Flavin-dependent monooxygenase, oxygenase subunit HsaA K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D I601_0579 hsaA_1; Flavin-dependent monooxygenase, oxygenase subunit HsaA K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D I601_3467 hsaB_2; Flavin-dependent monooxygenase, reductase subunit HsaB K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
D I601_0582 hsaB_1; Flavin-dependent monooxygenase, reductase subunit HsaB K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
D I601_3468 hsaC_2; Iron-dependent extradiol dioxygenase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25]
D I601_0578 hsaC_1; Iron-dependent extradiol dioxygenase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25]
D I601_3469 hsaD_2; 4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolase K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17]
D I601_0619 Long-chain-fatty-acid--CoA ligase FadD13 K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41]
D I601_0635 lcfB_1; Long-chain-fatty-acid--CoA ligase K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41]
D I601_0503 ksi; Steroid Delta-isomerase K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1]
D I601_0994 SnoaL-like domain protein K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1]
D I601_0577 urdA; Urocanate reductase precursor K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5]
D I601_1513 ifcA_1; Fumarate reductase flavoprotein subunit precursor K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ndk03020]
D I601_0723 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D I601_0722 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D I601_0444 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D I601_3024 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D I601_0498 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ndk03010]
D I601_3654 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D I601_2544 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D I601_0468 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D I601_0445 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D I601_0457 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D I601_1242 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D I601_0481 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D I601_0460 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D I601_1959 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D I601_0475 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D I601_0446 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D I601_0482 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D I601_0447 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D I601_0461 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D I601_2621 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D I601_2528 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D I601_0465 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D I601_1240 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D I601_0470 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D I601_3826 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D I601_0738 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D I601_0474 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D I601_0473 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D I601_0462 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D I601_0459 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D I601_0735 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D I601_1239 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D I601_0736 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D I601_0739 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D I601_1958 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D I601_0464 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D I601_0455 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D I601_0467 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D I601_0443 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D I601_0458 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D I601_2532 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D I601_3052 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D I601_2407 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D I601_0469 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D I601_0472 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D I601_0463 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D I601_0358 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D I601_2408 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D I601_2507 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D I601_0466 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D I601_0456 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D I601_3937 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D I601_2513 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D I601_0749 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D I601_1272 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D I601_3051 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D I601_0448 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D I601_2105 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I601_3730 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I601_3067 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I601_2106 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I601_3068 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I601_3729 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I601_2107 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I601_3069 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I601_3728 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ndk00970]
D I601_1283 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I601_0661 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I601_3862 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I601_2350 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I601_3946 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I601_0675 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I601_1412 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I601_3743 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D I601_0862 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D I601_2943 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D I601_0367 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D I601_2485 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D I601_2486 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I601_0863 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I601_2944 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I601_2380 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I601_0990 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I601_0218 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I601_2344 tRNA-His K14226 tRNA-His; tRNA His
D I601_1281 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I601_3343 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I601_2322 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I601_1987 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I601_1303 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D I601_3677 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I601_1694 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D I601_2339 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D I601_0045 tRNA-Met K14230 tRNA-Met; tRNA Met
D I601_0750 tRNA-Met K14230 tRNA-Met; tRNA Met
D I601_3741 tRNA-Met K14230 tRNA-Met; tRNA Met
D I601_4080 tRNA-Met K14230 tRNA-Met; tRNA Met
D I601_0866 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D I601_2381 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I601_3097 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I601_1533 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I601_1408 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I601_1525 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I601_1496 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I601_1406 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I601_1590 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I601_0751 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I601_1870 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I601_0742 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D I601_0765 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D I601_2942 tRNA-Val K14237 tRNA-Val; tRNA Val
D I601_2946 tRNA-Val K14237 tRNA-Val; tRNA Val
D I601_3712 tRNA-Val K14237 tRNA-Val; tRNA Val
D I601_3994 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D I601_2483 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D I601_1424 aam_2; Acylamidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D I601_2425 gatA_2; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D I601_2426 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D I601_2424 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D I601_2988 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D I601_2979 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I601_3759 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D I601_2959 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D I601_1394 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D I601_3995 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D I601_1855 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D I601_2374 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D I601_3029 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D I601_2387 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D I601_3832 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D I601_2172 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D I601_0926 lysS; Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D I601_3945 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D I601_2602 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D I601_2978 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D I601_3055 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D I601_3056 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D I601_3732 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D I601_0257 trpS_1; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D I601_0824 trpS_2; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ndk03060]
D I601_0454 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I601_0741 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D I601_3430 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D I601_2972 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D I601_2973 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D I601_3378 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D I601_2971 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D I601_1269 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I601_0133 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I601_2525 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D I601_2521 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D I601_2679 arsA_4; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D I601_0867 arsA_1; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D I601_3308 tatAy; Sec-independent protein translocase protein TatAy K03116 tatA; sec-independent protein translocase protein TatA
D I601_0129 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D I601_3307 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D I601_2533 lepB_1; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D I601_3981 lepB_2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D I601_2742 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D I601_4118 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D I601_1049 sipW_1; Signal peptidase I W K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D I601_2795 sipW_2; Signal peptidase I W K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ndk04122]
D I601_2647 iscS_2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I601_2414 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I601_1741 cysA_3; Putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D I601_3600 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D I601_2646 tusA; Sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D I601_2415 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D I601_0050 moaE1; Molybdopterin synthase catalytic subunit 1 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D I601_3391 moaA; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D I601_2311 cysO_2; Sulfur carrier protein CysO K03636 moaD; sulfur-carrier protein
D I601_0527 cysO_1; Sulfur carrier protein CysO K03636 moaD; sulfur-carrier protein
D I601_1726 hypothetical protein K03636 moaD; sulfur-carrier protein
D I601_0076 moeZ_1; putative adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D I601_0665 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D I601_2048 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D I601_2313 cysM; O-phosphoserine sulfhydrylase K21148 cysM; [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase [EC:2.5.1.113]
D I601_2310 mec; CysO-cysteine peptidase K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome [PATH:ndk03050]
D I601_3319 mpa; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
D I601_3314 prcA; Proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D I601_3315 prcB; Proteasome subunit beta precursor K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:ndk03018]
D I601_2406 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D I601_1976 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I601_2622 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D I601_1196 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D I601_3032 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I601_1348 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I601_3940 hypothetical protein K03628 rho; transcription termination factor Rho
D I601_2895 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D I601_0845 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D I601_0946 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D I601_0340 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_2098 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_0526 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_1712 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D I601_4057 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D I601_1254 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ndk03030]
D I601_2662 uvrC_1; UvrABC system protein C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I601_2745 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I601_1526 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I601_1585 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I601_3828 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I601_1274 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I601_1235 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D I601_3745 dnaG_1; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D I601_1241 ssb2; Single-stranded DNA-binding protein 2 K03111 ssb; single-strand DNA-binding protein
D I601_3070 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I601_2358 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D I601_4133 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I601_0328 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D I601_3697 pspA_3; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D I601_2534 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D I601_3667 polA_2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I601_2419 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ndk03410]
D I601_1548 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D I601_0543 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D I601_1689 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D I601_3066 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D I601_1377 fpg2; putative formamidopyrimidine-DNA glycosylase-like protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D I601_2515 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D I601_0892 mutM; Formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D I601_2906 nei; Endonuclease 8 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D I601_2378 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D I601_2488 alkA; DNA-3-methyladenine glycosylase 2 K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D I601_0755 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D I601_1929 mug_2; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D I601_0410 mug_1; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D I601_1984 Uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D I601_2073 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D I601_2704 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D I601_1245 end; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D I601_3667 polA_2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I601_2419 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ndk03420]
D I601_1972 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D I601_3439 uvrA_3; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D I601_2281 uvrA_1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D I601_3520 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D I601_3437 uvrC_2; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D I601_0067 uvrD_1; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I601_0279 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I601_3151 yjcD; Putative ATP-dependent DNA helicase YjcD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I601_3667 polA_2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I601_2419 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D I601_0498 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:ndk03430]
D I601_0067 uvrD_1; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I601_0279 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I601_3151 yjcD; Putative ATP-dependent DNA helicase YjcD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I601_2068 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D I601_2067 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D I601_1241 ssb2; Single-stranded DNA-binding protein 2 K03111 ssb; single-strand DNA-binding protein
D I601_3070 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I601_2358 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D I601_4133 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I601_2745 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I601_1274 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I601_1526 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I601_3828 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I601_1585 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I601_2662 uvrC_1; UvrABC system protein C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I601_2419 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ndk03440]
D I601_1241 ssb2; Single-stranded DNA-binding protein 2 K03111 ssb; single-strand DNA-binding protein
D I601_3070 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I601_2358 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D I601_4133 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I601_1276 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D I601_3769 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D I601_1528 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D I601_2922 DNA recombination protein RecA K03553 recA; recombination protein RecA
D I601_3667 polA_2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I601_2969 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D I601_2970 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D I601_2968 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D I601_2509 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D I601_1467 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D I601_1466 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D I601_1468 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D I601_2745 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I601_1274 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I601_1526 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I601_3828 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I601_1585 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I601_2662 uvrC_1; UvrABC system protein C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I601_3027 priA_2; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:ndk03450]
D I601_2207 ykoV; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku
D I601_2208 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D I601_2209 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ndk03250]
D I601_1292 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ndk02010]
D I601_2063 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D I601_2062 modB; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D I601_2061 phnT; Putative 2-aminoethylphosphonate import ATP-binding protein PhnT K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D I601_1641 putative binding protein component of ABC iron transporter precursor K02012 afuA; iron(III) transport system substrate-binding protein
D I601_1640 phnV_2; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein
D I601_1639 fbpC2; Fe(3+) ions import ATP-binding protein FbpC 2 K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D I601_1654 thiB; Thiamine-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein
D I601_1655 phnU; Putative 2-aminoethylphosphonate transport system permease protein PhnU K02063 thiP; thiamine transport system permease protein
D I601_1656 cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D I601_2579 potD_3; Spermidine/putrescine-binding periplasmic protein precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D I601_2582 ydcV_3; Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein
D I601_2581 potH; Putrescine transport system permease protein PotH K11071 potB; spermidine/putrescine transport system permease protein
D I601_2580 potA_2; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D I601_2617 opuAC; Glycine betaine-binding protein OpuAC precursor K02002 proX; glycine betaine/proline transport system substrate-binding protein
D I601_2616 opuAB; Glycine betaine transport system permease protein OpuAB K02001 proW; glycine betaine/proline transport system permease protein
D I601_2615 opuAA; Glycine betaine transport ATP-binding protein OpuAA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D I601_0518 osmF_1; Putative osmoprotectant uptake system substrate-binding protein OsmF precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D I601_1677 osmF_2; Putative osmoprotectant uptake system substrate-binding protein OsmF precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D I601_0515 opuBB_1; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein
D I601_0517 opuBB_2; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein
D I601_1675 opuCB; Carnitine transport permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D I601_1676 yehY; Putative osmoprotectant uptake system permease protein YehY K05846 opuBD; osmoprotectant transport system permease protein
D I601_0516 opuCA_1; Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D I601_1674 opuCA_2; Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D I601_2054 sugC; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D I601_2056 sugA; Trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein
D I601_2055 sugB; Trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein
D I601_3503 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_3504 mlaD_2; putative phospholipid ABC transporter-binding protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_3506 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_3507 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_0726 mlaD_1; putative phospholipid ABC transporter-binding protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_0727 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_0729 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_0730 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_0731 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_3505 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_3508 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_0728 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_3509 mlaE_3; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D I601_3510 mlaE_4; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D I601_0732 mlaE_1; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D I601_0733 mlaE_2; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D I601_0734 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D I601_0242 tmpC; Membrane lipoprotein TmpC precursor K07335 bmpA; basic membrane protein A and related proteins
D I601_0244 beta-methylgalactoside transporter inner membrane component K23535 nupB; general nucleoside transport system permease protein
D I601_0245 beta-methylgalactoside transporter inner membrane component K23536 nupC; general nucleoside transport system permease protein
D I601_0243 rbsA; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D I601_1705 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D I601_0717 pstS; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D I601_1706 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D I601_1707 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D I601_1708 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D I601_4001 phnD; Phosphate-import protein PhnD precursor K02044 phnD; phosphonate transport system substrate-binding protein
D I601_3999 phnE; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D I601_4000 phnC; Phosphate-import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D I601_1884 glnH_3; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D I601_1883 glnM_3; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein
D I601_1882 glnP; putative glutamine ABC transporter permease protein GlnP K10007 gluD; glutamate transport system permease protein
D I601_1885 glnQ_5; Glutamine transport ATP-binding protein GlnQ K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D I601_2119 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_2219 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_3671 braC_2; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_0437 braC_1; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_3913 Receptor family ligand binding region K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_1191 livH_3; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_0435 livH_1; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_2120 livH_5; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_2222 livH_7; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_1862 livH_4; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_3912 livH_9; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_3675 livH_8; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_1189 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D I601_0436 livH_2; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D I601_2121 livH_6; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D I601_2223 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D I601_3911 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D I601_3674 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D I601_1863 lptB_2; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_1192 glnQ_2; Glutamine transport ATP-binding protein GlnQ K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_0433 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_2122 lptB_3; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_2220 lptB_4; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_3910 lptB_5; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_3673 livF_7; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_1864 livF_3; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_3672 livF_6; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_1190 livF_2; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_0434 livF_1; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_2123 livF_4; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_2221 livF_5; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_3909 livF_8; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_0306 metQ; putative D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D I601_0308 metI; D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein
D I601_0307 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D I601_3625 yfiY; putative siderophore-binding lipoprotein YfiY precursor K25286 fagD; iron-siderophore transport system substrate-binding protein
D I601_3624 yfiZ; putative siderophore transport system permease protein YfiZ precursor K23186 fepD; iron-siderophore transport system permease protein
D I601_3623 fecD; Fe(3+) dicitrate transport system permease protein FecD K23187 fepG; iron-siderophore transport system permease protein
D I601_3622 yusV; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D I601_3761 znuA; High-affinity zinc uptake system binding-protein ZnuA precursor K09815 znuA; zinc transport system substrate-binding protein
D I601_3763 znuB; High-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein
D I601_3762 znuC; High-affinity zinc uptake system ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D I601_2327 cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D I601_2326 nikMN; Fused nickel transport protein NikMN K02007 cbiM; cobalt/nickel transport system permease protein
D I601_2328 cbiQ; Cobalt transport protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D I601_2329 cbiO; Cobalt import ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D I601_2475 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D I601_2473 bioN; Energy-coupling factor transporter transmembrane protein BioN K16783 bioN; biotin transport system permease protein
D I601_2474 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D I601_2430 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D I601_2910 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D I601_2911 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D I601_2909 drrA_4; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D I601_2846 ccmC; Heme exporter protein C K02195 ccmC; heme exporter protein C
D I601_2845 CcmB protein K02194 ccmB; heme exporter protein B
D I601_2259 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D I601_2258 ftsE_1; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
C 02060 Phosphotransferase system (PTS) [PATH:ndk02060]
D I601_4065 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D I601_2618 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D I601_4062 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) K02784 ptsH; phosphocarrier protein HPr
D I601_4067 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D I601_2619 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D I601_4063 lacC; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:ndk03070]
D I601_2972 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D I601_3378 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D I601_2973 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D I601_0741 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D I601_3430 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D I601_0454 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I601_2971 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D I601_1269 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I601_0133 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I601_2521 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D I601_2525 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D I601_3308 tatAy; Sec-independent protein translocase protein TatAy K03116 tatA; sec-independent protein translocase protein TatA
D I601_0129 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D I601_3307 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D I601_0006 TraM recognition site of TraD and TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D I601_4149 TraM recognition site of TraD and TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ndk02020]
D I601_1792 divL_2; Sensor protein DivL K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I601_2786 phoR_2; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I601_3768 walK_3; Sensor protein kinase WalK K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I601_1909 pld; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D I601_1844 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D I601_1843 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D I601_1705 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D I601_0717 pstS; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D I601_3422 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D I601_1065 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D I601_1064 mprA_2; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D I601_1954 mucD; putative periplasmic serine endoprotease DegP-like precursor K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D I601_2187 htrA; Serine protease Do-like HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D I601_0139 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D I601_0140 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D I601_3939 phoB; Phosphate regulon transcriptional regulatory protein PhoB K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D I601_1273 dnaA_2; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D I601_4107 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I601_0975 mcl2; (3S)-malyl-CoA thioesterase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D I601_2117 citE; Citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D I601_1335 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D I601_3957 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D I601_0111 algD; GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D I601_0087 degU_1; Transcriptional regulatory protein DegU K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D I601_3631 narG; Nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D I601_3630 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D I601_3628 narX_1; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D I601_3629 narX_2; Nitrate reductase-like protein NarX K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D I601_1001 desK; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D I601_1002 vraR; Response regulator protein VraR K07693 desR; two-component system, NarL family, response regulator DesR
D I601_1618 liaR_1; Transcriptional regulatory protein LiaR K11618 liaR; two-component system, NarL family, response regulator LiaR
D I601_1999 dosT; Hypoxia sensor histidine kinase response regulator DosT K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D I601_1996 devR_1; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR
D I601_2669 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D I601_2676 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D I601_2675 minD_3; Septum site-determining protein MinD K02282 cpaE; pilus assembly protein CpaE
D I601_2674 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_2243 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_1568 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_0028 ptlH_1; Type IV secretion system protein PtlH K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_3135 ptlH_2; Type IV secretion system protein PtlH K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_2673 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D I601_2244 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D I601_1569 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D I601_2672 Bacterial type II secretion system protein F domain protein K12511 tadC; tight adherence protein C
D I601_2245 Bacterial type II secretion system protein F domain protein K12511 tadC; tight adherence protein C
D I601_2538 hypothetical protein K27080 tadG; tight adherence protein G
D I601_2524 glnD; Bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D I601_2523 glnB; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D I601_2790 glnA_1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I601_2869 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I601_2165 atoE; Short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D I601_3459 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3463 fadA_5; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3532 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1116 fadA_3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1183 bktB_2; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0593 fadA_1; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0597 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0615 pcaF_1; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_2361 fadA_4; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0654 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3901 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D I601_4009 crp_2; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D I601_1547 crp_1; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D I601_1382 Cyclic nucleotide-gated potassium channel K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D I601_1229 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D I601_2838 hypothetical protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D I601_2839 Cytochrome C oxidase, mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D I601_1120 ythA_1; Putative cytochrome bd menaquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D I601_4086 ythA_2; Putative cytochrome bd menaquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D I601_1119 appB; Cytochrome bd-II ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D I601_4087 Cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D I601_1061 ptpA; putative low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D I601_0187 cenA_1; Endoglucanase A precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D I601_1207 cenA_2; Endoglucanase A precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D I601_0711 egl; Endoglucanase precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ndk02024]
D I601_1069 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D I601_2697 aroH_1; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D I601_1070 phnA_1; Anthranilate synthase component 1, pyocyanine specific K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86]
D I601_1810 potD_2; Spermidine/putrescine-binding periplasmic protein precursor K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D I601_1598 potD_1; Spermidine/putrescine-binding periplasmic protein precursor K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D I601_0915 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D I601_0913 phnV_1; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D I601_1812 ydcV_2; Inner membrane ABC transporter permease protein YdcV K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D I601_1600 ydcV_1; Inner membrane ABC transporter permease protein YdcV K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D I601_0914 ynjC; Inner membrane ABC transporter permease protein YnjC K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D I601_1811 potB; Spermidine/putrescine transport system permease protein PotB K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D I601_1599 ydcU; Inner membrane ABC transporter permease protein YdcU K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D I601_0912 cysA_1; Sulfate/thiosulfate import ATP-binding protein CysA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D I601_1813 potA_1; Spermidine/putrescine import ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D I601_2119 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_2219 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_3671 braC_2; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_0437 braC_1; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_3913 Receptor family ligand binding region K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_1191 livH_3; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_0435 livH_1; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_2120 livH_5; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_2222 livH_7; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_1862 livH_4; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_3912 livH_9; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_3675 livH_8; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_1189 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D I601_0436 livH_2; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D I601_2121 livH_6; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D I601_2223 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D I601_3911 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D I601_3674 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D I601_1863 lptB_2; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_1192 glnQ_2; Glutamine transport ATP-binding protein GlnQ K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_0433 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_2122 lptB_3; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_2220 lptB_4; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_3910 lptB_5; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_3673 livF_7; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_1864 livF_3; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_3672 livF_6; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_1190 livF_2; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_0434 livF_1; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_2123 livF_4; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_2221 livF_5; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_3909 livF_8; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_2627 Transglutaminase-activating metalloprotease precursor K20273 zmpA; zinc metalloprotease ZmpA
D I601_0903 lcfB_3; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_2677 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_3810 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_0815 lcfB_2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_3650 yhfT; putative acyl--CoA ligase YhfT K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_4009 crp_2; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D I601_1547 crp_1; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D I601_1382 Cyclic nucleotide-gated potassium channel K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D I601_3036 ribD_2; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D I601_1182 nikA_1; Nickel-binding periplasmic protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_2981 ddpA; putative D,D-dipeptide-binding periplasmic protein DdpA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_2164 gsiB_1; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_0561 hbpA_1; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_0588 dppA; Periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_1426 nikA_2; Nickel-binding periplasmic protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_0645 hbpA_2; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_3327 oppA; Oligopeptide-binding protein OppA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_1179 dppB_1; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I601_2982 dppB_3; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I601_0567 nikB; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I601_1427 gsiC; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I601_3326 dppB_4; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I601_2855 dppB_2; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I601_2856 gsiD_4; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I601_0566 gsiD_1; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I601_1428 gsiD_3; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I601_3325 gsiD_5; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I601_1181 gsiD_2; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I601_2980 oppC; Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I601_1180 gsiA_1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D I601_2857 oppD_3; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D I601_2983 oppD_4; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D I601_0565 oppD_1; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D I601_1429 oppD_2; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D I601_0564 oppF_1; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D I601_2984 oppF_4; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D I601_1269 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I601_3448 Thermophilic serine proteinase precursor K14645 K14645; serine protease [EC:3.4.21.-]
D I601_3378 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D I601_0741 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D I601_3430 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D I601_0454 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I601_2971 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D I601_0133 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I601_2521 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D I601_2525 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D I601_3901 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
C 02040 Flagellar assembly
D I601_3617 hrdB_1; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor
D I601_3646 hrdB_2; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D I601_1976 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:ndk04980]
D I601_3920 Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D I601_0248 putative GTPase K07588 MMAA; GTPase [EC:3.6.5.-]
D I601_3889 putative GTPase K07588 MMAA; GTPase [EC:3.6.5.-]
D I601_0249 mutB_1; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I601_0250 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I601_3332 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ndk01501]
D I601_3614 ybbD; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D I601_3647 Beta-hexosaminidase A precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D I601_4046 Peptidase family M48 K02172 blaR1; bla regulator protein blaR1
D I601_4097 htpX; Protease HtpX K02172 blaR1; bla regulator protein blaR1
D I601_2398 spoVD; Stage V sporulation protein D K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D I601_2728 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ndk01502]
D I601_2502 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I601_2503 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I601_1969 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D I601_2501 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D I601_2730 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D I601_2733 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D I601_4107 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D I601_1292 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ndk01000]
C 01001 Protein kinases [BR:ndk01001]
D I601_2562 RIO1 family protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D I601_1257 prkC_3; Serine/threonine-protein kinase PrkC K22893 pknH; serine/threonine kinase PknH [EC:2.7.11.1]
D I601_2705 spk1; Serine/threonine-protein kinase PK-1 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D I601_1296 pknB_2; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D I601_1297 pknA; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D I601_1630 prkC_4; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D I601_3733 stkP; Serine/threonine-protein kinase StkP K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D I601_0360 prkC_1; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D I601_2030 pknB_3; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D I601_1243 prkC_2; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D I601_2128 pknB_4; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D I601_2269 afsK_1; Serine/threonine-protein kinase AfsK K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D I601_3515 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D I601_3960 rsbW; Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D I601_1775 ywqD_1; Tyrosine-protein kinase YwqD K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D I601_1792 divL_2; Sensor protein DivL K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I601_2786 phoR_2; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I601_3768 walK_3; Sensor protein kinase WalK K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I601_1844 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D I601_1065 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D I601_0139 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D I601_4056 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D I601_0884 phoR_1; Alkaline phosphatase synthesis sensor protein PhoR K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D I601_1226 divL_1; Sensor protein DivL K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D I601_3938 yycG_2; Sensor histidine kinase YycG K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D I601_4072 arlS; Signal transduction histidine-protein kinase ArlS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D I601_1001 desK; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D I601_1999 dosT; Hypoxia sensor histidine kinase response regulator DosT K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D I601_1563 yehU; Sensor histidine kinase YehU K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D I601_3964 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D I601_0877 barA_1; Signal transduction histidine-protein kinase BarA K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ndk01009]
D I601_0141 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D I601_1300 pstP; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D I601_0496 stp_1; Serine/threonine phosphatase stp K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D I601_3380 serB_2; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:ndk01002]
D I601_2742 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D I601_4118 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D I601_2992 Type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D I601_0322 guaA_1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D I601_1128 guaA_2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D I601_2791 guaA_3; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D I601_2665 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D I601_0883 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D I601_3681 gltB_2; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D I601_1965 glmS_2; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D I601_1197 glmS_1; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D I601_0109 asnB; Asparagine synthetase [glutamine-hydrolyzing] 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D I601_1438 yraA; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124]
D I601_1121 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D I601_2484 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D I601_0363 pepN_1; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D I601_2369 pepN_6; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D I601_3257 pepN_7; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D I601_2627 Transglutaminase-activating metalloprotease precursor K20273 zmpA; zinc metalloprotease ZmpA
D I601_1252 Immune inhibitor A peptidase M6 K09607 ina; immune inhibitor A [EC:3.4.24.-]
D I601_1347 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D I601_4107 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I601_2884 pepA_2; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D I601_2181 pepA_1; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D I601_2175 dapE_3; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D I601_0969 dapE_2; Succinyl-diaminopimelate desuccinylase K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D I601_3460 map-1; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D I601_2777 map_2; Methionine aminopeptidase 2 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D I601_0452 map_1; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D I601_2354 pepPI; Xaa-Pro aminopeptidase 1 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D I601_3876 Fungalysin metallopeptidase (M36) K01417 MEP; extracellular elastinolytic metalloproteinase [EC:3.4.24.-]
D I601_1666 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D I601_2637 hypothetical protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D I601_0874 hypothetical protein K16922 yydH; putative peptide zinc metalloprotease protein
D I601_4046 Peptidase family M48 K02172 blaR1; bla regulator protein blaR1
D I601_4097 htpX; Protease HtpX K02172 blaR1; bla regulator protein blaR1
D I601_2355 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D I601_1954 mucD; putative periplasmic serine endoprotease DegP-like precursor K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D I601_2187 htrA; Serine protease Do-like HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D I601_3448 Thermophilic serine proteinase precursor K14645 K14645; serine protease [EC:3.4.21.-]
D I601_0492 vpr_1; Minor extracellular protease vpr precursor K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D I601_1524 aprE_1; M-protease precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D I601_3900 aprE_2; Subtilisin E precursor K17734 aprX; serine protease AprX [EC:3.4.21.-]
D I601_3645 ptrB; Protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D I601_1660 dacC; D-alanyl-D-alanine carboxypeptidase DacC precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D I601_2384 clpP2_1; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D I601_2385 clpP2_2; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D I601_3149 hypothetical protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D I601_0048 lon2; Lon protease 2 K07177 K07177; Lon-like protease
D I601_1910 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D I601_2533 lepB_1; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D I601_3981 lepB_2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D I601_1049 sipW_1; Signal peptidase I W K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D I601_2795 sipW_2; Signal peptidase I W K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D I601_0669 quiP; Acyl-homoserine lactone acylase QuiP precursor K01434 pac; penicillin G amidase [EC:3.5.1.11]
D I601_1019 pepE; Peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D I601_3382 cphB; Cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D I601_2444 mccF; Microcin C7 self-immunity protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D I601_3314 prcA; Proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D I601_3315 prcB; Proteasome subunit beta precursor K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D I601_1895 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D I601_3250 protease TldD K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:ndk01003]
D I601_3294 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D I601_0548 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D I601_0099 pimA_1; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D I601_0412 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D I601_3933 wecA_2; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D I601_3661 aftD; Alpha-(1->3)-arabinofuranosyltransferase K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D I601_0163 glfT1; Galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D I601_0162 glfT2_2; Galactofuranosyl transferase GlfT2 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D I601_0160 glfT2_1; Galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D I601_0184 icaA; Poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D I601_3494 mshA_2; D-inositol 3-phosphate glycosyltransferase K26815 manT; MMP alpha-(1->4)-mannosyltransferase [EC:2.4.1.393]
D I601_0533 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D I601_1791 gpgS; Glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ndk01005]
D I601_3933 wecA_2; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ndk01011]
D I601_3289 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D I601_0745 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D I601_2734 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D I601_2731 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D I601_2729 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D I601_2502 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I601_2503 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I601_1969 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D I601_2314 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D I601_2444 mccF; Microcin C7 self-immunity protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D I601_2730 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D I601_2733 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D I601_3341 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I601_1256 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D I601_2398 spoVD; Stage V sporulation protein D K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D I601_2728 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D I601_1298 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D I601_1660 dacC; D-alanyl-D-alanine carboxypeptidase DacC precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D I601_4107 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I601_2665 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D I601_2990 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D I601_0198 lytB_1; Amidase enhancer precursor K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D I601_0201 lytB_2; Amidase enhancer precursor K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:ndk01004]
D I601_3719 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D I601_3720 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D I601_3722 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I601_3533 fabG_10; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_0591 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_2288 novJ; Short-chain reductase protein NovJ K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_0617 fabG3_1; 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_3219 fabG_9; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_3387 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I601_1166 fabL; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabL K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D I601_3537 tesB_1; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D I601_3538 tesB_2; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D I601_3386 inhA; Enoyl-[acyl-carrier-protein] reductase [NADH] K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118]
D I601_2941 desA1; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D I601_0381 desA3_1; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D I601_1023 desA3_2; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D I601_1554 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D I601_1815 sucD_3; Succinyl-CoA ligase [ADP-forming] subunit alpha K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D I601_0903 lcfB_3; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_2677 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_3810 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_0815 lcfB_2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_3650 yhfT; putative acyl--CoA ligase YhfT K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_3447 Long-chain-fatty-acid--CoA ligase FadD17 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D I601_3455 lcfB_8; Long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D I601_1021 fadK_2; Short-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D I601_2224 lcfB_6; Long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D I601_0071 plsC_1; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I601_2685 plsC_4; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I601_3095 plsC_5; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I601_3705 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ndk01008]
D I601_3782 Alpha-pyrone synthesis polyketide synthase-like Pks11 K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D I601_3783 Isoprenylcysteine carboxyl methyltransferase (ICMT) family protein K16168 bpsB; methyltransferase
D I601_2566 snaC; NADH:riboflavin 5'-phosphate oxidoreductase K14631 actVB; flavin reductase ActVB [EC:1.5.1.-]
D I601_3731 lldD_2; L-lactate dehydrogenase [cytochrome] K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:ndk01006]
D I601_2709 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D I601_2034 (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D I601_3767 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D I601_1894 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D I601_0797 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D I601_3423 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ndk01007]
D I601_0926 lysS; Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D I601_2483 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D I601_3732 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D I601_0257 trpS_1; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D I601_0824 trpS_2; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D I601_1855 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D I601_3945 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D I601_2374 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D I601_2172 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D I601_2387 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D I601_3832 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D I601_2979 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I601_2978 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D I601_3759 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D I601_1394 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D I601_2602 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D I601_2959 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D I601_2988 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D I601_3055 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D I601_3056 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D I601_0938 dapC; putative N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D I601_1058 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I601_2751 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I601_1137 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D I601_0396 rocD; Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D I601_3060 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D I601_2590 davT_1; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_2861 davT_2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D I601_0092 kat; 3-aminobutyryl-CoA aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D I601_0807 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase 2 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D I601_2945 dat; D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I601_2467 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I601_0701 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:ndk00199]
D I601_3461 Steroid C26-monooxygenase K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D I601_3462 Steroid C26-monooxygenase K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D I601_0960 cypE; putative bifunctional P-450/NADPH-P450 reductase 2 K24241 CYP135; cytochrome P450 family 135 [EC:1.14.-.-]
C 00194 Photosynthesis proteins [BR:ndk00194]
D I601_3923 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D I601_3924 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D I601_3925 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D I601_3926 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D I601_3927 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D I601_3928 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D I601_3929 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D I601_3930 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ndk03000]
D I601_2770 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D I601_2488 alkA; DNA-3-methyladenine glycosylase 2 K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D I601_4064 srlR; Glucitol operon repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D I601_0507 dasR; HTH-type transcriptional repressor DasR K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D I601_1423 lutR_1; HTH-type transcriptional regulator LutR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D I601_2392 gabR; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D I601_2476 tetR_2; Tetracycline repressor protein class E K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D I601_0962 ethR; HTH-type transcriptional regulator EthR K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D I601_3197 comR; HTH-type transcriptional repressor ComR K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D I601_0573 kstR_1; HTH-type transcriptional repressor KstR K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D I601_3495 kstR_2; HTH-type transcriptional repressor KstR K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D I601_0605 kstR2_2; HTH-type transcriptional repressor KstR2 K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D I601_0616 kstR2_3; HTH-type transcriptional repressor KstR2 K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D I601_1171 kstR2_5; HTH-type transcriptional repressor KstR2 K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D I601_2578 asnC_2; Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D I601_3303 lrp_2; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D I601_0690 soxR; Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D I601_0943 hspR_1; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D I601_1730 hspR_2; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D I601_1643 ycgE_1; HTH-type transcriptional repressor YcgE K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D I601_1717 perR; Peroxide-responsive repressor PerR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D I601_3764 zur; Zinc uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D I601_3254 furA; Transcriptional regulator FurA K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D I601_0644 iclR_1; Acetate operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D I601_4009 crp_2; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D I601_1547 crp_1; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D I601_1382 Cyclic nucleotide-gated potassium channel K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D I601_3205 cmr; HTH-type transcriptional regulator Cmr K21884 cmr; CRP/FNR family transcriptional regulator, cAMP and macrophage regulator
D I601_3572 aseR; HTH-type transcriptional repressor AseR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D I601_4116 nmtR; HTH-type transcriptional regulator NmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D I601_4029 hypothetical protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D I601_2904 clgR_2; Transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D I601_3619 lineage-specific thermal regulator protein K10947 K10947; PadR family transcriptional regulator
D I601_0683 ideR; Iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D I601_2100 Iron dependent repressor, metal binding and dimerization domain K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D I601_0181 birA_1; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D I601_2090 acoR_2; Acetoin dehydrogenase operon transcriptional activator AcoR K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D I601_0813 rex; Redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D I601_2170 hypothetical protein K07729 K07729; putative transcriptional regulator
D I601_0151 whiB; Transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D I601_3963 whiB1; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D I601_1537 whiB4; Transcriptional regulator WhiB4 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D I601_0060 whiB7; putative transcriptional regulator WhiB7 K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D I601_1700 csoR_1; Copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D I601_0319 Purine catabolism regulatory protein-like family protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D I601_1309 pucR_2; Purine catabolism regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D I601_0112 Bacterial transcriptional activator domain protein K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D I601_1265 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D I601_3125 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D I601_4135 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D I601_1849 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D I601_3062 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D I601_3804 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D I601_1985 gcvR; Glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D I601_1037 PspC domain protein K03973 pspC; phage shock protein C
D I601_3006 pyrR; Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D I601_2293 hypothetical protein K07735 algH; putative transcriptional regulator
D I601_0987 yocK_1; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor
D I601_0628 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D I601_2741 yocK_2; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor
D I601_1913 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D I601_2724 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ndk03021]
D I601_0498 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D I601_0444 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D I601_0723 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D I601_0722 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D I601_3024 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D I601_3617 hrdB_1; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor
D I601_3646 hrdB_2; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor
D I601_3970 sigR; ECF RNA polymerase sigma factor SigR K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D I601_1079 sigK; ECF RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D I601_1258 sigM; ECF RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D I601_1151 sigG; ECF RNA polymerase sigma factor SigG K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D I601_0274 sigW; ECF RNA polymerase sigma factor SigW K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D I601_0920 ylaC; RNA polymerase sigma factor YlaC K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D I601_3961 sigF_2; RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
D I601_1644 sigF_1; RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
D I601_2608 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D I601_2998 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D I601_0740 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D I601_2479 rsbP_3; Phosphoserine phosphatase RsbP K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D I601_3512 rsbU_2; Phosphoserine phosphatase RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D I601_2423 rsbU_1; Phosphoserine phosphatase RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D I601_2480 rsbQ; Sigma factor SigB regulation protein RsbQ K19707 rsbQ; sigma-B regulation protein RsbQ
D I601_1575 rsbV_1; Anti-sigma-B factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D I601_3514 rsbV_3; Anti-sigma-B factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D I601_3515 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D I601_3960 rsbW; Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D I601_0987 yocK_1; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor
D I601_0628 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D I601_2741 yocK_2; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor
D I601_2025 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D I601_3940 hypothetical protein K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ndk03019]
D I601_2406 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D I601_2514 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D I601_2895 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D I601_0845 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D I601_2345 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D I601_1196 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D I601_3032 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I601_1348 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I601_1976 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I601_2622 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D I601_3940 hypothetical protein K03628 rho; transcription termination factor Rho
D I601_0946 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D I601_0340 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_2098 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_0526 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_1712 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D I601_4057 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D I601_1254 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D I601_3436 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D I601_3305 ski2-like helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D I601_0394 hrpB_1; ATP-dependent RNA helicase HrpB K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D I601_3009 hrpB_2; ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:ndk03011]
D I601_3654 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D I601_2544 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D I601_0468 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D I601_0445 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D I601_0457 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D I601_1242 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D I601_0481 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D I601_0460 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D I601_1959 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D I601_0475 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D I601_0446 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D I601_0482 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D I601_0447 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D I601_0461 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D I601_2621 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D I601_2528 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D I601_0465 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D I601_1240 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D I601_0470 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D I601_3826 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D I601_0738 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D I601_0474 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D I601_0473 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D I601_0462 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D I601_0459 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D I601_1239 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D I601_0736 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D I601_0739 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D I601_0735 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D I601_1958 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D I601_0464 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D I601_0455 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D I601_0467 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D I601_0443 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D I601_0458 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D I601_2532 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D I601_3052 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D I601_2407 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D I601_0469 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D I601_0472 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D I601_0463 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D I601_2408 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D I601_2507 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D I601_0466 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D I601_0456 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D I601_3937 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D I601_2513 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D I601_0749 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D I601_1272 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D I601_3051 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D I601_0448 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D I601_0358 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D I601_2107 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I601_3069 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I601_3728 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I601_2105 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I601_3730 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I601_3067 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I601_2106 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I601_3068 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I601_3729 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ndk03009]
D I601_2514 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D I601_2562 RIO1 family protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D I601_2345 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D I601_3776 era; GTPase Era K03595 era; GTPase
D I601_2409 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D I601_0987 yocK_1; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor
D I601_0628 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D I601_2741 yocK_2; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor
D I601_2608 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D I601_2998 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D I601_0740 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D I601_1875 rsmA_1; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D I601_3030 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D I601_0439 rsmC; Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D I601_2510 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D I601_3802 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D I601_1267 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D I601_2726 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D I601_1871 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D I601_3074 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D I601_1856 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D I601_2554 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D I601_1950 rlmC; 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D I601_3091 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D I601_2743 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D I601_0352 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D I601_0663 ydaF_1; Putative ribosomal N-acetyltransferase YdaF K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D I601_1223 rimK; Ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D I601_2530 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D I601_2898 rimO; Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D I601_2406 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D I601_2989 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D I601_1196 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D I601_3975 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D I601_3096 der; GTPase Der K03977 engA; GTPase
D I601_2102 feoB_1; Ferrous iron transport protein B K03977 engA; GTPase
D I601_1904 hflX; GTPase HflX K03665 hflX; GTPase
D I601_3934 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D I601_2975 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D I601_2611 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D I601_2607 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D I601_3984 ribosome-associated protein K14761 rlbA; ribosome-associated protein
D I601_3864 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D I601_3790 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D I601_2080 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D I601_2512 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ndk03016]
D I601_2483 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D I601_2602 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D I601_2172 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D I601_3832 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D I601_2374 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D I601_3945 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D I601_2979 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I601_2988 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D I601_3759 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D I601_2959 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D I601_1394 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D I601_1855 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D I601_2387 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D I601_2978 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D I601_3055 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D I601_3056 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D I601_3732 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D I601_0257 trpS_1; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D I601_0824 trpS_2; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D I601_0977 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D I601_1136 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D I601_3795 hinT; HIT-like protein HinT K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D I601_2287 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D I601_3320 trmI; tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D I601_0476 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D I601_0440 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D I601_2612 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D I601_2647 iscS_2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I601_2414 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I601_3934 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D I601_1894 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D I601_3989 selD; Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D I601_0356 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D I601_1271 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D I601_2319 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D I601_0390 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D I601_1485 2',5' RNA ligase family K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D I601_0926 lysS; Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D I601_2748 ybaK_2; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D I601_1493 tadA_2; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D I601_1887 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D I601_2531 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D I601_3053 aviRb; 23S rRNA (uridine(2479)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D I601_2415 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D I601_2646 tusA; Sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D I601_3264 Iron-sulfur cluster biosynthesis K13628 iscA; iron-sulfur cluster assembly protein
D I601_1718 glycine cleavage system aminomethyltransferase T K06980 ygfZ; tRNA-modifying protein YgfZ
D I601_1662 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D I601_0353 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D I601_0350 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D I601_1971 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D I601_2622 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ndk03012]
D I601_2610 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D I601_3050 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D I601_2545 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D I601_0479 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D I601_0480 fusA; Elongation factor G K02355 fusA; elongation factor G
D I601_3996 selB; Selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor
D I601_3936 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D I601_2547 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D I601_3935 prmC_3; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D I601_0357 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D I601_0449 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D I601_2997 efp; Elongation factor P K02356 efp; elongation factor P
D I601_2256 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D I601_0844 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D I601_0894 arfB; Peptidyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:ndk03110]
D I601_0941 clpB_1; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D I601_1688 clpC1; ATP-dependent Clp protease ATP-binding subunit ClpC1 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D I601_2386 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D I601_0946 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D I601_0340 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_2098 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_0526 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_0944 dnaJ_2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D I601_3803 dnaJ_3; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D I601_0945 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D I601_1729 18 kDa heat shock protein K13993 HSP20; HSP20 family protein
D I601_0341 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D I601_2331 groS5; 10 kDa chaperonin 5 K04078 groES; chaperonin GroES
D I601_1666 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D I601_3930 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D I601_3703 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D I601_3448 Thermophilic serine proteinase precursor K14645 K14645; serine protease [EC:3.4.21.-]
D I601_0492 vpr_1; Minor extracellular protease vpr precursor K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D I601_1524 aprE_1; M-protease precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D I601_1292 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D I601_3267 Putative peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D I601_2029 trxC_1; Putative thioredoxin-2 K03671 TXN; thioredoxin
D I601_1261 trxA; Thioredoxin-1 K03671 TXN; thioredoxin
D I601_4027 trxC_2; Putative thioredoxin-2 K03671 TXN; thioredoxin
D I601_3886 hypothetical protein K05838 ybbN; putative thioredoxin
D I601_2834 dsbE; Thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:ndk04131]
D I601_2394 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D I601_1156 yqiK; Inner membrane protein YqiK K07192 FLOT; flotillin
D I601_1384 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D I601_2679 arsA_4; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D I601_0867 arsA_1; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D I601_2768 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D I601_3433 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I601_1846 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I601_3679 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D I601_3291 Vacuole effluxer Atg22 like protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:ndk04121]
D I601_3316 pup; Prokaryotic ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:ndk03051]
D I601_3314 prcA; Proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D I601_3315 prcB; Proteasome subunit beta precursor K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D I601_3319 mpa; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
D I601_3312 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D I601_3310 hypothetical protein K13572 pafB; proteasome accessory factor B
D I601_3309 hypothetical protein K13573 pafC; proteasome accessory factor C
D I601_3317 dop; Depupylase K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:ndk03032]
D I601_0328 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D I601_2770 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D I601_1731 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D I601_2493 hypothetical protein K03530 hupB; DNA-binding protein HU-beta
D I601_1273 dnaA_2; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D I601_1235 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D I601_3745 dnaG_1; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D I601_1241 ssb2; Single-stranded DNA-binding protein 2 K03111 ssb; single-strand DNA-binding protein
D I601_3070 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I601_2358 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D I601_4133 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I601_2745 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I601_1274 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I601_3828 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I601_1585 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I601_2662 uvrC_1; UvrABC system protein C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I601_1526 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I601_3697 pspA_3; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D I601_2534 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D I601_3667 polA_2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I601_2419 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D I601_0165 polA_1; DNA polymerase I, thermostable K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-]
D I601_3610 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D I601_1279 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D I601_3615 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D I601_1278 gyrB_1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D I601_1582 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D I601_0705 Eukaryotic DNA topoisomerase I, catalytic core K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ndk03036]
D I601_2770 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D I601_2514 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D I601_2768 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D I601_1156 yqiK; Inner membrane protein YqiK K07192 FLOT; flotillin
D I601_1687 lsr2; Nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2
D I601_1731 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D I601_2493 hypothetical protein K03530 hupB; DNA-binding protein HU-beta
D I601_1273 dnaA_2; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D I601_0173 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein
D I601_3303 lrp_2; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D I601_2518 smc_1; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D I601_3089 scpA_2; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D I601_3090 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D I601_2258 ftsE_1; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D I601_2728 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D I601_2896 spoIIIE; DNA translocase SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D I601_2732 ftsW_2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D I601_2259 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D I601_2735 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D I601_2738 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF
D I601_2395 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D I601_2396 mreC; Cell shape-determining protein MreC precursor K03570 mreC; rod shape-determining protein MreC
D I601_2399 mrdB; Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D I601_0082 soj_1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D I601_1266 soj_2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D I601_3087 soj_3; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D I601_1265 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D I601_3125 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D I601_4135 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D I601_1267 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D I601_2542 xerC_3; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D I601_3122 xerC_5; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D I601_3082 xerD_5; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D I601_1100 xerC_1; Tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD
D I601_2236 xerD_3; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D I601_0626 xerD_1; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D I601_2499 xerC_2; Tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD
D I601_0128 minD_1; Septum site-determining protein MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D I601_3434 whiA; Sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:ndk03400]
D I601_2489 ogt_2; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D I601_0684 phrA; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D I601_0543 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D I601_3066 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D I601_1689 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D I601_1548 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D I601_0498 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D I601_2763 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D I601_2147 nudG_1; CTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D I601_0949 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D I601_3545 mutT4; Putative mutator protein MutT4 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D I601_1891 nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D I601_1918 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D I601_3589 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D I601_3479 Deoxyribodipyrimidine photo-lyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D I601_1929 mug_2; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D I601_0410 mug_1; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D I601_1984 Uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D I601_2488 alkA; DNA-3-methyladenine glycosylase 2 K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D I601_0755 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D I601_1377 fpg2; putative formamidopyrimidine-DNA glycosylase-like protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D I601_2515 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D I601_0892 mutM; Formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D I601_2906 nei; Endonuclease 8 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D I601_2378 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D I601_2073 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D I601_2704 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D I601_1245 end; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D I601_2419 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D I601_3667 polA_2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I601_3439 uvrA_3; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D I601_2281 uvrA_1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D I601_3520 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D I601_3437 uvrC_2; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D I601_0067 uvrD_1; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I601_0279 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I601_3151 yjcD; Putative ATP-dependent DNA helicase YjcD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I601_0723 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D I601_0722 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D I601_0444 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D I601_3024 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D I601_1972 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D I601_2068 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D I601_2067 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D I601_2745 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I601_1274 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I601_3828 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I601_1585 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I601_2662 uvrC_1; UvrABC system protein C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I601_1526 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I601_1241 ssb2; Single-stranded DNA-binding protein 2 K03111 ssb; single-strand DNA-binding protein
D I601_3070 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I601_2358 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D I601_4133 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I601_1467 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D I601_1466 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D I601_1468 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D I601_2922 DNA recombination protein RecA K03553 recA; recombination protein RecA
D I601_2969 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D I601_2970 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D I601_2968 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D I601_3027 priA_2; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D I601_3251 sbcC; Nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D I601_3252 sbcD; Nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D I601_0837 hypothetical protein K04485 radA; DNA repair protein RadA/Sms
D I601_1276 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D I601_2509 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D I601_3769 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D I601_1528 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D I601_3076 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D I601_2207 ykoV; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku
D I601_2208 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D I601_2209 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D I601_3610 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D I601_1279 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D I601_3615 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D I601_1278 gyrB_1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D I601_1582 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D I601_0705 Eukaryotic DNA topoisomerase I, catalytic core K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D I601_1731 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D I601_2493 hypothetical protein K03530 hupB; DNA-binding protein HU-beta
D I601_3032 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I601_1348 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I601_2719 dinB_1; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D I601_3641 dinB_2; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D I601_1910 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D I601_2717 dnaE2; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D I601_2923 recX; Regulatory protein RecX K03565 recX; regulatory protein
D I601_3112 helD_2; Helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D I601_1907 hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D I601_2907 putative ATP-dependent helicase Lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D I601_1704 ndx1; Diadenosine hexaphosphate hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D I601_3080 nudF; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D I601_1914 nrdJ; Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ndk03029]
D I601_2610 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D I601_3050 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D I601_2545 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D I601_0479 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D I601_0480 fusA; Elongation factor G K02355 fusA; elongation factor G
D I601_3776 era; GTPase Era K03595 era; GTPase
D I601_3732 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D I601_3832 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D I601_2979 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I601_3759 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D I601_3945 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D I601_1424 aam_2; Acylamidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D I601_2425 gatA_2; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D I601_2426 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D I601_2424 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D I601_1241 ssb2; Single-stranded DNA-binding protein 2 K03111 ssb; single-strand DNA-binding protein
D I601_3070 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I601_2358 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D I601_4133 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I601_0946 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D I601_0945 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D I601_0340 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_2098 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_0526 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_0341 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D I601_2331 groS5; 10 kDa chaperonin 5 K04078 groES; chaperonin GroES
D I601_0944 dnaJ_2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D I601_3803 dnaJ_3; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D I601_2647 iscS_2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I601_2414 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I601_0128 minD_1; Septum site-determining protein MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D I601_3423 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D I601_3422 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D I601_1269 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I601_1287 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D I601_3683 SCO1/SenC K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ndk02000]
D I601_3393 msbA_2; Lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D I601_2204 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D I601_2880 msbA_1; Lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D I601_3694 msbA_3; Lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D I601_3695 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D I601_2205 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D I601_1877 putative ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D I601_2063 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D I601_2062 modB; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D I601_2061 phnT; Putative 2-aminoethylphosphonate import ATP-binding protein PhnT K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D I601_1641 putative binding protein component of ABC iron transporter precursor K02012 afuA; iron(III) transport system substrate-binding protein
D I601_1640 phnV_2; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein
D I601_1639 fbpC2; Fe(3+) ions import ATP-binding protein FbpC 2 K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D I601_1654 thiB; Thiamine-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein
D I601_1655 phnU; Putative 2-aminoethylphosphonate transport system permease protein PhnU K02063 thiP; thiamine transport system permease protein
D I601_1656 cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D I601_2579 potD_3; Spermidine/putrescine-binding periplasmic protein precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D I601_2582 ydcV_3; Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein
D I601_2581 potH; Putrescine transport system permease protein PotH K11071 potB; spermidine/putrescine transport system permease protein
D I601_2580 potA_2; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D I601_1810 potD_2; Spermidine/putrescine-binding periplasmic protein precursor K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D I601_1598 potD_1; Spermidine/putrescine-binding periplasmic protein precursor K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D I601_0915 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D I601_0913 phnV_1; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D I601_1812 ydcV_2; Inner membrane ABC transporter permease protein YdcV K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D I601_1600 ydcV_1; Inner membrane ABC transporter permease protein YdcV K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D I601_0914 ynjC; Inner membrane ABC transporter permease protein YnjC K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D I601_1811 potB; Spermidine/putrescine transport system permease protein PotB K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D I601_1599 ydcU; Inner membrane ABC transporter permease protein YdcU K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D I601_0912 cysA_1; Sulfate/thiosulfate import ATP-binding protein CysA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D I601_1813 potA_1; Spermidine/putrescine import ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D I601_2617 opuAC; Glycine betaine-binding protein OpuAC precursor K02002 proX; glycine betaine/proline transport system substrate-binding protein
D I601_2616 opuAB; Glycine betaine transport system permease protein OpuAB K02001 proW; glycine betaine/proline transport system permease protein
D I601_2615 opuAA; Glycine betaine transport ATP-binding protein OpuAA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D I601_0518 osmF_1; Putative osmoprotectant uptake system substrate-binding protein OsmF precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D I601_1677 osmF_2; Putative osmoprotectant uptake system substrate-binding protein OsmF precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D I601_0515 opuBB_1; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein
D I601_0517 opuBB_2; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein
D I601_1675 opuCB; Carnitine transport permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D I601_1676 yehY; Putative osmoprotectant uptake system permease protein YehY K05846 opuBD; osmoprotectant transport system permease protein
D I601_0516 opuCA_1; Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D I601_1674 opuCA_2; Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D I601_2054 sugC; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D I601_2056 sugA; Trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein
D I601_2055 sugB; Trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein
D I601_0242 tmpC; Membrane lipoprotein TmpC precursor K07335 bmpA; basic membrane protein A and related proteins
D I601_0244 beta-methylgalactoside transporter inner membrane component K23535 nupB; general nucleoside transport system permease protein
D I601_0245 beta-methylgalactoside transporter inner membrane component K23536 nupC; general nucleoside transport system permease protein
D I601_0243 rbsA; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D I601_3503 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_3504 mlaD_2; putative phospholipid ABC transporter-binding protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_3506 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_3507 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_0726 mlaD_1; putative phospholipid ABC transporter-binding protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_0727 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_0729 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_0730 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_0731 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_3505 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_3508 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_0728 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I601_3509 mlaE_3; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D I601_3510 mlaE_4; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D I601_0732 mlaE_1; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D I601_0733 mlaE_2; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D I601_0734 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D I601_3501 hypothetical protein K18481 mas; Mce-associated membrane protein
D I601_3502 hypothetical protein K18481 mas; Mce-associated membrane protein
D I601_0725 hypothetical protein K18481 mas; Mce-associated membrane protein
D I601_0724 dnaJ_1; Chaperone protein DnaJ K18481 mas; Mce-associated membrane protein
D I601_0391 Bacterial extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D I601_1705 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D I601_0717 pstS; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D I601_1706 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D I601_1707 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D I601_1708 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D I601_4001 phnD; Phosphate-import protein PhnD precursor K02044 phnD; phosphonate transport system substrate-binding protein
D I601_3999 phnE; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D I601_4000 phnC; Phosphate-import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D I601_1884 glnH_3; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D I601_1883 glnM_3; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein
D I601_1882 glnP; putative glutamine ABC transporter permease protein GlnP K10007 gluD; glutamate transport system permease protein
D I601_1885 glnQ_5; Glutamine transport ATP-binding protein GlnQ K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D I601_2119 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_2219 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_3671 braC_2; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_0437 braC_1; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_3913 Receptor family ligand binding region K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I601_1191 livH_3; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_0435 livH_1; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_2120 livH_5; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_2222 livH_7; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_1862 livH_4; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_3912 livH_9; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_3675 livH_8; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D I601_1189 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D I601_0436 livH_2; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D I601_2121 livH_6; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D I601_2223 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D I601_3911 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D I601_3674 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D I601_1863 lptB_2; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_1192 glnQ_2; Glutamine transport ATP-binding protein GlnQ K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_0433 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_2122 lptB_3; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_2220 lptB_4; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_3910 lptB_5; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_3673 livF_7; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I601_1864 livF_3; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_3672 livF_6; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_1190 livF_2; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_0434 livF_1; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_2123 livF_4; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_2221 livF_5; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_3909 livF_8; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I601_0306 metQ; putative D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D I601_0308 metI; D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein
D I601_0307 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D I601_1822 glnH_2; Glutamine-binding periplasmic protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D I601_1133 artP; Arginine-binding extracellular protein ArtP precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D I601_1416 glnH_1; Glutamine-binding periplasmic protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D I601_2275 Bacterial extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D I601_1823 yecS; Inner membrane amino-acid ABC transporter permease protein YecS K02029 ABC.PA.P; polar amino acid transport system permease protein
D I601_1132 glnM_1; putative glutamine ABC transporter permease protein GlnM K02029 ABC.PA.P; polar amino acid transport system permease protein
D I601_1417 glnM_2; putative glutamine ABC transporter permease protein GlnM K02029 ABC.PA.P; polar amino acid transport system permease protein
D I601_1131 glnQ_1; Glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D I601_1418 glnQ_3; Glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D I601_1182 nikA_1; Nickel-binding periplasmic protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_2981 ddpA; putative D,D-dipeptide-binding periplasmic protein DdpA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_2164 gsiB_1; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_0561 hbpA_1; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_0588 dppA; Periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_1426 nikA_2; Nickel-binding periplasmic protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_0645 hbpA_2; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_3327 oppA; Oligopeptide-binding protein OppA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I601_1179 dppB_1; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I601_2982 dppB_3; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I601_0567 nikB; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I601_1427 gsiC; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I601_3326 dppB_4; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I601_2855 dppB_2; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I601_2856 gsiD_4; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I601_0566 gsiD_1; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I601_1428 gsiD_3; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I601_3325 gsiD_5; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I601_1181 gsiD_2; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I601_2980 oppC; Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I601_1180 gsiA_1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D I601_2857 oppD_3; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D I601_2983 oppD_4; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D I601_0565 oppD_1; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D I601_1429 oppD_2; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D I601_0564 oppF_1; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D I601_2984 oppF_4; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D I601_3625 yfiY; putative siderophore-binding lipoprotein YfiY precursor K25286 fagD; iron-siderophore transport system substrate-binding protein
D I601_3624 yfiZ; putative siderophore transport system permease protein YfiZ precursor K23186 fepD; iron-siderophore transport system permease protein
D I601_3623 fecD; Fe(3+) dicitrate transport system permease protein FecD K23187 fepG; iron-siderophore transport system permease protein
D I601_3622 yusV; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D I601_2011 btuF_2; Vitamin B12-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D I601_3859 corrinoid ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D I601_3858 hmuU; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein
D I601_3857 fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D I601_3376 ylmA; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D I601_3761 znuA; High-affinity zinc uptake system binding-protein ZnuA precursor K09815 znuA; zinc transport system substrate-binding protein
D I601_3763 znuB; High-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein
D I601_3762 znuC; High-affinity zinc uptake system ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D I601_2327 cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D I601_2328 cbiQ; Cobalt transport protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D I601_2326 nikMN; Fused nickel transport protein NikMN K02007 cbiM; cobalt/nickel transport system permease protein
D I601_2329 cbiO; Cobalt import ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D I601_2475 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D I601_2473 bioN; Energy-coupling factor transporter transmembrane protein BioN K16783 bioN; biotin transport system permease protein
D I601_2474 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D I601_2432 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D I601_2430 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D I601_2431 ykoD; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D I601_2910 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D I601_2911 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D I601_2909 drrA_4; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D I601_3399 ABC-2 family transporter protein K25149 narB; polyether ionophore transport system permease protein
D I601_3400 drrA_5; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K25150 narA; polyether ionophore transport system ATP-binding protein
D I601_2846 ccmC; Heme exporter protein C K02195 ccmC; heme exporter protein C
D I601_2845 CcmB protein K02194 ccmB; heme exporter protein B
D I601_2259 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D I601_2258 ftsE_1; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D I601_3421 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D I601_0159 tagG; Teichoic acid translocation permease protein TagG K01992 ABC-2.P; ABC-2 type transport system permease protein
D I601_1000 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D I601_1045 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D I601_1489 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D I601_0829 ybhR; Inner membrane transport permease YbhR K01992 ABC-2.P; ABC-2 type transport system permease protein
D I601_1962 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D I601_1218 drrB; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D I601_2317 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D I601_2451 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D I601_3420 drrA_6; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_0158 tagH; Teichoic acids export ATP-binding protein TagH K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_0999 drrA_1; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_1044 yxlF_1; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_1114 ecsA; ABC-type transporter ATP-binding protein EcsA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_1961 yxlF_3; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_2844 ftsE_2; Cell division ATP-binding protein FtsE K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_2875 drrA_3; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_1217 drrA_2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_1490 yxlF_2; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_2316 yxlF_4; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_2452 yxlF_5; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_0830 ybhF; putative ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_0407 X-Pro dipeptidyl-peptidase (S15 family) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I601_1103 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D I601_2157 macB; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D I601_1211 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D I601_1104 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D I601_1213 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D I601_2158 bceA; Bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D I601_3413 yurY; Vegetative protein 296 K09013 sufC; Fe-S cluster assembly ATP-binding protein
D I601_3651 sdcS; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D I601_1236 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D I601_2403 yycB; putative transporter YycB K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D I601_3632 narK; Nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D I601_3633 narT; putative nitrate transporter NarT K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D I601_0259 ydhP; Inner membrane transport protein YdhP K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D I601_2694 qacA_2; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D I601_3612 MFS-type drug efflux transporter P55 K27247 K27247; MFS transporter, DHA2 family, triacylglyceride efflux pump
D I601_3291 Vacuole effluxer Atg22 like protein K06902 UMF1; MFS transporter, UMF1 family
D I601_4065 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D I601_2618 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D I601_4062 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) K02784 ptsH; phosphocarrier protein HPr
D I601_2619 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D I601_4067 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D I601_0263 aqpZ2; Aquaporin Z 2 K06188 aqpZ; aquaporin Z
D I601_2551 glpF; Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D I601_2935 kch; Voltage-gated potassium channel Kch K10716 kch; voltage-gated potassium channel
D I601_2522 amtB; Ammonia channel precursor K03320 amt; ammonium transporter, Amt family
D I601_3194 focA; putative formate transporter 1 K21993 fdhC; formate transporter
D I601_0672 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D I601_3738 mscS; Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D I601_2366 ykuT; putative MscS family protein YkuT K22044 ybiO; moderate conductance mechanosensitive channel
D I601_2948 ureI; Acid-activated urea channel K22112 amiS; putative amide transporter protein
D I601_3338 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter
D I601_0858 crcB_1; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter
D I601_0859 crcB_2; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter
D I601_3237 corC_2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I601_0872 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I601_3236 corC_1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I601_0871 tlyC; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I601_3789 corC_3; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I601_0754 hypothetical protein K06518 cidA; holin-like protein
D I601_0332 czcD_1; Cobalt-zinc-cadmium resistance protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D I601_4092 czcD_2; Cobalt-zinc-cadmium resistance protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D I601_2131 qacC; Quaternary ammonium compound-resistance protein QacC K03297 emrE; small multidrug resistance pump
D I601_3478 sugE; Quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D I601_0983 yicL; putative inner membrane transporter YicL K03298 TC.DME; drug/metabolite transporter, DME family
D I601_2436 rhtA; Threonine/homoserine exporter RhtA K11939 rhtA; inner membrane transporter RhtA
D I601_0770 putative DMT superfamily transporter inner membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D I601_2136 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D I601_2277 ygbN; Inner membrane permease YgbN K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D I601_0280 betT; High-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein
D I601_1540 betL; Glycine betaine transporter BetL K02168 betT; choline/glycine/proline betaine transport protein
D I601_2400 chaA; Sodium/proton antiporter ChaA K07300 chaA; Ca2+:H+ antiporter
D I601_1555 actP_1; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D I601_1560 actP_2; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D I601_1553 nhaA; Na(+)/H(+) antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D I601_0793 nhaK; Sodium, potassium, lithium and rubidium/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D I601_4011 nhaP2_3; K(+)/H(+) antiporter NhaP2 K24160 NHA1; sodium/hydrogen antiporter
D I601_3186 nhaG; Na(+)/H(+) antiporter NhaG K24160 NHA1; sodium/hydrogen antiporter
D I601_2251 nhaP2_2; K(+)/H(+) antiporter NhaP2 K24160 NHA1; sodium/hydrogen antiporter
D I601_1514 nhaP2_1; K(+)/H(+) antiporter NhaP2 K11105 cvrA; potassium/hydrogen antiporter
D I601_3584 trkA_1; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D I601_3585 trkA_2; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D I601_0321 codB; Cytosine permease K10974 codB; cytosine permease
D I601_0484 pbuG; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease
D I601_0197 ydcO; Inner membrane protein YdcO K05782 benE; benzoate membrane transport protein
D I601_3740 dauA_2; C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family
D I601_0840 dauA_1; C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family
D I601_2679 arsA_4; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D I601_0867 arsA_1; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D I601_3571 Sodium Bile acid symporter family protein K03325 ACR3; arsenite transporter
D I601_1256 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D I601_1009 argO; Arginine exporter protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO
D I601_2629 AzlC protein K26605 azlC; branched chain amino acid efflux pump
D I601_2628 Branched-chain amino acid transport protein (AzlD) K26606 azlD; branched chain amino acid efflux pump
D I601_2023 tqsA; AI-2 transport protein TqsA K20469 K20469; putative heme transporter
D I601_1484 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D I601_2732 ftsW_2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D I601_1384 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D I601_2454 efeU; Ferrous iron permease EfeU K07243 FTR; high-affinity iron transporter
D I601_2455 Efem/EfeO family lipoprotein precursor K07224 efeO; iron uptake system component EfeO
D I601_2456 efeN_1; putative deferrochelatase/peroxidase EfeN precursor K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D I601_1576 hppA; K(+)-insensitive pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D I601_4100 thiol:disulfide interchange protein precursor K06196 ccdA; cytochrome c-type biogenesis protein
D I601_4125 thiol:disulfide interchange protein precursor K06196 ccdA; cytochrome c-type biogenesis protein
D I601_0804 dsbD_1; Thiol:disulfide interchange protein DsbD K06196 ccdA; cytochrome c-type biogenesis protein
D I601_3631 narG; Nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D I601_3630 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D I601_3628 narX_1; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D I601_1775 ywqD_1; Tyrosine-protein kinase YwqD K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D I601_2101 FeoA domain protein K04758 feoA; ferrous iron transport protein A
D I601_2103 feoB_2; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D I601_2833 ccmF; Cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D I601_4093 pcoC; Copper resistance protein C precursor K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:ndk02044]
D I601_2992 Type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D I601_2676 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D I601_2675 minD_3; Septum site-determining protein MinD K02282 cpaE; pilus assembly protein CpaE
D I601_2674 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_2243 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_1568 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_0028 ptlH_1; Type IV secretion system protein PtlH K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_3135 ptlH_2; Type IV secretion system protein PtlH K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_2673 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D I601_2244 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D I601_1569 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D I601_2672 Bacterial type II secretion system protein F domain protein K12511 tadC; tight adherence protein C
D I601_2245 Bacterial type II secretion system protein F domain protein K12511 tadC; tight adherence protein C
D I601_2538 hypothetical protein K27080 tadG; tight adherence protein G
D I601_2669 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D I601_2739 YGGT family protein K02221 yggT; YggT family protein
D I601_3830 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA
D I601_3829 ComEC family competence protein K02238 comEC; competence protein ComEC
D I601_0006 TraM recognition site of TraD and TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D I601_4149 TraM recognition site of TraD and TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D I601_1523 hypothetical protein K27085 eccB; ESX secretion system ATPase EccB
D I601_1518 eccCa1; ESX-1 secretion system protein EccCa1 K27086 eccC; ESX secretion system protein EccC
D I601_1522 hypothetical protein K27087 eccD; ESX secretion system protein EccD
D I601_1519 hypothetical protein K27087 eccD; ESX secretion system protein EccD
D I601_1524 aprE_1; M-protease precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D I601_1521 hypothetical protein K14956 esx; ESAT-6 family protein
D I601_1520 hypothetical protein K14956 esx; ESAT-6 family protein
D I601_0133 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I601_2972 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D I601_3378 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D I601_0741 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D I601_2973 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D I601_3430 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D I601_0454 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I601_2525 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D I601_2521 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D I601_2971 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D I601_1269 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I601_3308 tatAy; Sec-independent protein translocase protein TatAy K03116 tatA; sec-independent protein translocase protein TatA
D I601_0129 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D I601_3307 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ndk02042]
D I601_3237 corC_2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I601_0872 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I601_3236 corC_1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I601_0871 tlyC; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I601_3789 corC_3; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I601_2033 hemolysin-III related protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ndk02022]
D I601_1792 divL_2; Sensor protein DivL K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I601_2786 phoR_2; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I601_3768 walK_3; Sensor protein kinase WalK K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I601_1844 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D I601_1843 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D I601_1065 mprB; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D I601_1064 mprA_2; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D I601_0139 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D I601_0140 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D I601_3939 phoB; Phosphate regulon transcriptional regulatory protein PhoB K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D I601_4056 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D I601_0884 phoR_1; Alkaline phosphatase synthesis sensor protein PhoR K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D I601_1226 divL_1; Sensor protein DivL K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D I601_3938 yycG_2; Sensor histidine kinase YycG K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D I601_4072 arlS; Signal transduction histidine-protein kinase ArlS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D I601_4055 tcrX; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
D I601_4071 tcrA; Transcriptional regulatory protein TcrA K02483 K02483; two-component system, OmpR family, response regulator
D I601_2800 phoP; Alkaline phosphatase synthesis transcriptional regulatory protein PhoP K02483 K02483; two-component system, OmpR family, response regulator
D I601_0087 degU_1; Transcriptional regulatory protein DegU K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D I601_1001 desK; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D I601_1002 vraR; Response regulator protein VraR K07693 desR; two-component system, NarL family, response regulator DesR
D I601_1618 liaR_1; Transcriptional regulatory protein LiaR K11618 liaR; two-component system, NarL family, response regulator LiaR
D I601_1999 dosT; Hypoxia sensor histidine kinase response regulator DosT K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D I601_1996 devR_1; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR
D I601_1563 yehU; Sensor histidine kinase YehU K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D I601_3901 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D I601_3964 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D I601_3676 pdtaR; putative transcriptional regulatory protein pdtaR K22010 pdtaR; two-component system, response regulator PdtaR
D I601_0877 barA_1; Signal transduction histidine-protein kinase BarA K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:ndk02035]
D I601_3901 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D I601_2992 Type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D I601_2669 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D I601_2676 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D I601_2675 minD_3; Septum site-determining protein MinD K02282 cpaE; pilus assembly protein CpaE
D I601_2674 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_2243 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_1568 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_0028 ptlH_1; Type IV secretion system protein PtlH K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D I601_3135 ptlH_2; Type IV secretion system protein PtlH K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ndk04812]
D I601_2395 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D I601_2735 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D I601_0082 soj_1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D I601_1266 soj_2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D I601_3087 soj_3; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D I601_1265 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D I601_3125 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D I601_4135 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ndk04147]
D I601_2768 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D I601_1976 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I601_3433 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I601_3432 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D I601_3679 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D I601_1292 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D I601_1156 yqiK; Inner membrane protein YqiK K07192 FLOT; flotillin
D I601_0340 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_2098 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_0526 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I601_0946 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D I601_3426 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I601_0331 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D I601_0333 guaB_1; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D I601_0479 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D I601_1136 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D I601_3795 hinT; HIT-like protein HinT K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D I601_2287 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D I601_0903 lcfB_3; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_2677 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_3810 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_0815 lcfB_2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_3650 yhfT; putative acyl--CoA ligase YhfT K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I601_3459 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3463 fadA_5; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3532 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1116 fadA_3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_1183 bktB_2; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_3890 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0593 fadA_1; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0597 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0615 pcaF_1; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_2361 fadA_4; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0654 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I601_0141 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D I601_0453 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D I601_2974 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D I601_3065 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D I601_3063 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D I601_2576 N(G),N(G)-dimethylarginine dimethylaminohydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D I601_1825 N(G),N(G)-dimethylarginine dimethylaminohydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D I601_0760 Fumarylacetoacetate (FAA) hydrolase family protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D I601_3353 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D I601_3880 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D I601_2552 glpK_1; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D I601_2690 glpK_2; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D I601_2790 glnA_1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I601_2869 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I601_0809 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D I601_2298 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D I601_2447 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D I601_0499 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I601_0270 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D I601_0223 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_2882 pdhD_2; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_1185 pdhD_1; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I601_3870 etfA; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D I601_1826 gdhA_1; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D I601_1067 zwf_1; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D I601_1210 zwf_2; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D I601_3431 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D I601_1846 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ndk02048]
D I601_0679 D12 class N6 adenine-specific DNA methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D I601_2770 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D I601_0405 putative methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D I601_1037 PspC domain protein K03973 pspC; phage shock protein C
D I601_2735 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D I601_2395 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D I601_2483 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D I601_2647 iscS_2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I601_2414 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ndk01504]
D I601_2761 hypothetical protein K17840 aac2-I; aminoglycoside 2'-N-acetyltransferase I [EC:2.3.1.59]
D I601_3820 Aminoglycoside/hydroxyurea antibiotic resistance kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D I601_2782 hypothetical protein K18844 aph; spectinomycin phosphotransferase
D I601_2694 qacA_2; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D I601_2824 pcpB; Pentachlorophenol 4-monooxygenase K21267 iri; rifampicin monooxygenase [EC:1.14.13.211]
D I601_4046 Peptidase family M48 K02172 blaR1; bla regulator protein blaR1
D I601_4097 htpX; Protease HtpX K02172 blaR1; bla regulator protein blaR1
D I601_4107 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ndk03100]
D I601_1283 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I601_0661 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I601_3862 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I601_2350 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I601_3946 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I601_0675 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I601_1412 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I601_3743 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D I601_0862 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D I601_2943 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D I601_0367 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D I601_2485 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D I601_2486 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I601_0863 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I601_2944 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I601_2380 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I601_0990 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I601_0218 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I601_2344 tRNA-His K14226 tRNA-His; tRNA His
D I601_1281 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I601_3343 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I601_2322 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I601_1987 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I601_1303 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D I601_3677 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I601_1694 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D I601_2339 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D I601_0045 tRNA-Met K14230 tRNA-Met; tRNA Met
D I601_0750 tRNA-Met K14230 tRNA-Met; tRNA Met
D I601_3741 tRNA-Met K14230 tRNA-Met; tRNA Met
D I601_4080 tRNA-Met K14230 tRNA-Met; tRNA Met
D I601_0866 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D I601_2381 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I601_3097 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I601_1533 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I601_1408 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I601_1525 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I601_1496 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I601_1406 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I601_1590 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I601_0751 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I601_1870 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I601_0742 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D I601_0765 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D I601_2942 tRNA-Val K14237 tRNA-Val; tRNA Val
D I601_2946 tRNA-Val K14237 tRNA-Val; tRNA Val
D I601_3712 tRNA-Val K14237 tRNA-Val; tRNA Val
D I601_3994 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D I601_2105 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I601_3730 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I601_3067 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I601_2106 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I601_3068 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I601_3729 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I601_2107 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I601_3069 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I601_3728 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I601_2267 ssrA; transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D I601_0344 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D I601_0950 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D I601_3596 L-gulono-1,4-lactone dehydrogenase K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-]
D I601_2780 yliI_2; Soluble aldose sugar dehydrogenase YliI precursor K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D I601_0710 mdh_2; NAD-dependent methanol dehydrogenase K11173 ADHFE1; hydroxyacid-oxoacid transhydrogenase [EC:1.1.99.24]
D I601_1324 acr1_2; Fatty acyl-CoA reductase K11168 DHRS12; dehydrogenase/reductase SDR family member 12 [EC:1.1.-.-]
D I601_1312 cdhC; Caffeine dehydrogenase subunit gamma K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D I601_0514 cutS; Carbon monoxide dehydrogenase small chain K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D I601_0512 cutM; Carbon monoxide dehydrogenase medium chain K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D I601_0513 cutL; Carbon monoxide dehydrogenase large chain K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D I601_1313 cdhA; Caffeine dehydrogenase subunit alpha K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D I601_1135 fadH_1; 2,4-dienoyl-CoA reductase [NADPH] K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D I601_0886 iorA; Isoquinoline 1-oxidoreductase subunit alpha K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D I601_0887 iorB; Isoquinoline 1-oxidoreductase subunit beta K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D I601_0720 Putative oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D I601_0595 mmgC_5; Acyl-CoA dehydrogenase K22818 fadE26; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-]
D I601_3445 mmgC_13; Acyl-CoA dehydrogenase K22818 fadE26; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-]
D I601_3446 mmgC_14; Acyl-CoA dehydrogenase K22819 fadE27; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase beta subunit [EC:1.3.99.-]
D I601_0594 acdA_3; Acyl-CoA dehydrogenase K22819 fadE27; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase beta subunit [EC:1.3.99.-]
D I601_3490 mmgC_15; Acyl-CoA dehydrogenase K22820 fadE34; 3-oxochol-4-en-24-oyl-CoA dehydrogenase [EC:1.3.99.-]
D I601_3486 acrC_2; Acryloyl-CoA reductase (NADH) K22822 fadE29; 3-oxo-4-pregnene-20-carboxyl-CoA dehydrogenase beta subunit [EC:1.3.99.-]
D I601_2624 NADP oxidoreductase coenzyme F420-dependent K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D I601_0292 prephenate dehydrogenase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D I601_2558 stcD; putative N-methylproline demethylase K22551 hpbA; N-methyl-L-proline demethylase [EC:1.5.3.-]
D I601_3253 protoporphyrinogen oxidase K18208 RNLS; renalase [EC:1.6.3.5]
D I601_0222 lpdA; NAD(P)H dehydrogenase (quinone) K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D I601_1344 qorA_1; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D I601_3003 qorA_2; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D I601_3199 mtr; Mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D I601_2021 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D I601_0383 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D I601_1057 yqjG; Glutathionyl-hydroquinone reductase YqjG K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D I601_2567 Arylesterase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D I601_3704 efeN_2; putative deferrochelatase/peroxidase EfeN precursor K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D I601_2325 bcp; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D I601_3636 tpx; putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D I601_3713 Putative peroxiredoxin K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29]
D I601_1141 yhhW_3; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D I601_0848 yhhW_2; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D I601_2342 yhhW_4; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D I601_0756 yhhW_1; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D I601_1038 hmp_1; Flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D I601_3700 mhuD; Heme-degrading monooxygenase HmoB K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57]
D I601_3959 sodN; Superoxide dismutase [Ni] precursor K00518 sodN; nickel superoxide dismutase [EC:1.15.1.1]
D I601_3500 yumC; Ferredoxin--NADP reductase 2 K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D I601_0203 ArsC family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D I601_0063 Putative glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D I601_3570 arsC1; Arsenate-mycothiol transferase ArsC1 K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D I601_1085 pcm; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D I601_1082 cfa_1; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D I601_1083 cfa_2; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D I601_3778 cfa_3; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D I601_1879 tam; Trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D I601_3491 hypothetical protein K24288 meT1; MMP 1-O-methyltransferase [EC:2.1.1.365]
D I601_1724 mshD_2; Mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D I601_3295 lnt_1; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D I601_4120 lnt_2; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D I601_1372 aat; Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D I601_1838 mshA_1; D-inositol 3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D I601_1386 AIR carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D I601_3682 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D I601_4068 apbE; Thiamine biosynthesis lipoprotein ApbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D I601_2508 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D I601_1635 ppsR; Phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D I601_2792 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D I601_0838 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D I601_1363 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D I601_2684 Thermostable monoacylglycerol lipase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D I601_0704 ymdB; O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D I601_3868 GDSL-like Lipase/Acylhydrolase K23978 IAH1; isoamyl acetate esterase [EC:3.1.1.112]
D I601_2226 Arylesterase K19311 lipV; lipase [EC:3.1.1.-]
D I601_3968 hypothetical protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D I601_1112 lcdH; L-carnitine dehydrogenase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D I601_2037 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D I601_2078 Thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D I601_2364 acyl-CoA thioesterase YbgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D I601_2519 Thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D I601_1828 iphP_2; Tyrosine-protein phosphatase precursor K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D I601_3281 iphP_3; Tyrosine-protein phosphatase precursor K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D I601_3863 gpgP; Glucosyl-3-phosphoglycerate phosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D I601_0084 error-prone DNA polymerase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D I601_3381 sixA; Phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D I601_1873 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D I601_0037 nucH; Thermonuclease precursor K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D I601_1605 nuc; Thermonuclease precursor K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D I601_3906 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D I601_3492 hypothetical protein K27194 mmpH; MMP endo-(1,4)-3-O-methyl-alpha-D-mannosidase [EC:3.2.1.221]
D I601_1986 def2; Peptide deformylase 2 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D I601_3028 def_1; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D I601_3360 def_2; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D I601_2333 pvdQ; Acyl-homoserine lactone acylase PvdQ precursor K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D I601_2148 mshB_1; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D I601_2591 pgdA; Peptidoglycan-N-acetylglucosamine deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D I601_2027 mca_1; Mycothiol S-conjugate amidase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D I601_1403 2-oxoglutaramate amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D I601_2723 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D I601_1327 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D I601_0219 ydeN; Putative hydrolase YdeN K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D I601_3482 lipid-transfer protein K25623 ltp2; 17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase [EC:4.1.3.-]
D I601_0600 lipid-transfer protein K25623 ltp2; 17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase [EC:4.1.3.-]
D I601_1968 nnr_1; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D I601_0603 hypothetical protein K25621 chsH2; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase alpha subunit [EC:4.2.1.-]
D I601_3484 hypothetical protein K25621 chsH2; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase alpha subunit [EC:4.2.1.-]
D I601_3485 hypothetical protein K25621 chsH2; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase alpha subunit [EC:4.2.1.-]
D I601_0601 hypothetical protein K25622 chsH1; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase beta subunit [EC:4.2.1.-]
D I601_3483 MaoC like domain protein K25622 chsH1; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase beta subunit [EC:4.2.1.-]
D I601_0491 gph_1; Phosphoglycolate phosphatase K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D I601_1385 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D I601_3191 nnr_2; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6]
D I601_1647 scpA_1; Methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D I601_3453 Long-chain-fatty-acid--CoA ligase FadD19 K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42]
D I601_1184 lcfB_4; Long-chain-fatty-acid--CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D I601_3298 lcfB_7; Long-chain-fatty-acid--CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D I601_0556 Long-chain-fatty-acid--CoA ligase FadD13 K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-]
D I601_0590 Long-chain-fatty-acid--CoA ligase FadD13 K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-]
D I601_0587 Long-chain-fatty-acid--CoA ligase FadD17 K25776 casI; steroid-22-oyl-CoA synthetase [EC:6.2.1.-]
D I601_3334 mshC_1; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D I601_4058 mshC_2; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D I601_3383 cphA_1; Cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D I601_3385 cphA_2; Cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D I601_1094 accD5_2; putative propionyl-CoA carboxylase beta chain 5 K01970 accD2; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D I601_1321 accD_2; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D I601_1043 accD_1; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D I601_1093 accA1_1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K27596 accA2; acyl-CoA carboxylase subunit alpha [EC:6.4.1.-]
D I601_2825 ctpF; putative cation-transporting ATPase F K12953 ctpF; cation-transporting P-type ATPase F [EC:7.2.2.-]
D I601_4117 cadA; putative cadmium-transporting ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D I601_0823 acuC; Acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
D I601_1494 lutA; Lactate utilization protein A K18928 lldE; L-lactate dehydrogenase complex protein LldE
D I601_1495 lutB; Lactate utilization protein B K18929 lldF; L-lactate dehydrogenase complex protein LldF
C 99982 Energy metabolism
D I601_3256 formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D I601_1307 sucD_2; Succinyl-CoA ligase [ADP-forming] subunit alpha K02381 fdrA; FdrA protein
D I601_1172 thcC; Rhodocoxin K04755 fdx; ferredoxin, 2Fe-2S
D I601_3168 Ferredoxin-6 K04755 fdx; ferredoxin, 2Fe-2S
D I601_3499 hypothetical protein K05337 fer; ferredoxin
D I601_1170 hypothetical protein K05337 fer; ferredoxin
D I601_1338 fdx; Ferredoxin K05337 fer; ferredoxin
D I601_3411 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D I601_3871 etfB; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D I601_3388 hypothetical protein K09165 K09165; dodecin
C 99983 Lipid metabolism
D I601_2933 aidB; Putative acyl-CoA dehydrogenase AidB K09456 aidB; putative acyl-CoA dehydrogenase
D I601_3831 DegV domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D I601_3885 putative sulfate transport protein CysZ K06203 cysZ; CysZ protein
D I601_0305 hypothetical protein K18802 DUG3; glutamine amidotransferase
D I601_2737 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D I601_1874 rpf2; Resuscitation-promoting factor Rpf2 precursor K21688 rpfB; resuscitation-promoting factor RpfB
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D I601_3973 DoxX K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D I601_0489 csp; Cold shock-like protein K03704 cspA; cold shock protein
D I601_1698 cspA; putative cold shock protein A K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D I601_2307 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D I601_2382 tig; Trigger factor K03545 tig; trigger factor
D I601_2261 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D I601_2540 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein
D I601_4089 ccsB_1; Cytochrome c biogenesis protein CcsB K07399 resB; cytochrome c biogenesis protein
D I601_4123 ccsB_2; Cytochrome c biogenesis protein CcsB K07399 resB; cytochrome c biogenesis protein
D I601_0803 ccs1; Cytochrome c biogenesis protein Ccs1 K07399 resB; cytochrome c biogenesis protein
D I601_0520 pucA; putative xanthine dehydrogenase subunit A K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D I601_2072 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D I601_3150 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D I601_2539 hypothetical protein K07460 yraN; putative endonuclease
D I601_1747 GIY-YIG nuclease superfamily protein K07461 K07461; putative endonuclease
D I601_3322 PD-(D/E)XK nuclease superfamily protein K07465 K07465; putative RecB family exonuclease
D I601_2541 hypothetical protein K04096 smf; DNA processing protein
D I601_2985 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D I601_1764 hypothetical protein K07483 K07483; transposase
D I601_1901 Transposase K07485 K07485; transposase
D I601_2066 Transposase K07485 K07485; transposase
D I601_3998 Transposase K07485 K07485; transposase
D I601_4049 Transposase K07485 K07485; transposase
D I601_1778 Transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D I601_1796 Transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D I601_1020 Transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D I601_0625 Transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D I601_1761 Integrase core domain protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D I601_2635 hypothetical protein K03969 pspA; phage shock protein A
D I601_1527 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D I601_3737 yfdC; Inner membrane protein YfdC K21990 yfdC; formate-nitrite transporter family protein
D I601_0535 yicJ; Inner membrane symporter YicJ K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D I601_1376 yhdG_1; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D I601_1471 yhdG_2; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D I601_1710 pitA; Low-affinity inorganic phosphate transporter 1 K03306 TC.PIT; inorganic phosphate transporter, PiT family
D I601_3800 Sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D I601_3905 alsT; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D I601_1943 Sodium Bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D I601_2955 Sodium Bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D I601_1355 Sodium Bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D I601_1437 nupX; Nucleoside permease NupX K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D I601_1268 R3H domain protein K06346 jag; spoIIIJ-associated protein
D I601_3551 hin; DNA-invertase hin K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D I601_0869 yjiY; Inner membrane protein YjiY K06200 cstA; carbon starvation protein
D I601_1831 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D I601_3791 ybeZ_2; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D I601_2035 ybeZ_1; PhoH-like protein K07175 phoH2; PhoH-like ATPase
D I601_0766 putative nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D I601_2848 ccmE; Cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D I601_2835 ccmH; Cytochrome c-type biogenesis protein CcmH precursor K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D I601_2897 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D I601_1845 hypothetical protein K02039 phoU; phosphate transport system protein
D I601_0451 alx; Inner membrane protein alx K05794 terC; tellurite resistance protein TerC
D I601_2700 czcO_3; putative oxidoreductase CzcO K07222 K07222; putative flavoprotein involved in K+ transport
D I601_3573 czcO_4; putative oxidoreductase CzcO K07222 K07222; putative flavoprotein involved in K+ transport
B
B 09194 Poorly characterized
C 99996 General function prediction only
D I601_1652 yjcF; putative N-acetyltransferase YjcF K02348 elaA; ElaA protein
D I601_0054 polX; DNA polymerase/3'-5' exonuclease PolX K04477 ycdX; putative hydrolase
D I601_1574 ski2-like helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D I601_2365 glbO; globin K06886 glbN; hemoglobin
D I601_0313 ydgH; Putative membrane protein YdgH K06994 K06994; putative drug exporter of the RND superfamily
D I601_1333 ydfJ_1; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D I601_3160 ydfJ_2; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D I601_4020 ydfJ_3; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D I601_4115 ydfJ_4; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D I601_0978 Patatin-like phospholipase K07001 K07001; NTE family protein
D I601_2816 rssA_2; NTE family protein RssA K07001 K07001; NTE family protein
D I601_1289 rssA_1; NTE family protein RssA K07001 K07001; NTE family protein
D I601_1441 Patatin-like phospholipase K07001 K07001; NTE family protein
D I601_3204 rssA_3; NTE family protein RssA K07001 K07001; NTE family protein
D I601_2603 Phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D I601_0355 haloacid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D I601_3416 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D I601_3415 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D I601_1721 hypothetical protein K07058 K07058; membrane protein
D I601_0255 yhjD; Inner membrane protein YhjD K07058 K07058; membrane protein
D I601_2934 Ribonuclease BN-like family protein K07058 K07058; membrane protein
D I601_0839 ribonuclease BN/unknown domain fusion protein K07058 K07058; membrane protein
D I601_1091 Ribonuclease BN-like family protein K07058 K07058; membrane protein
D I601_3293 phage T7 F exclusion suppressor FxsA K07113 fxsA; UPF0716 protein FxsA
D I601_1947 hypothetical protein K04750 phnB; PhnB protein
D I601_0935 yghB; Inner membrane protein YghB K03975 dedA; membrane-associated protein
D I601_0703 yidH; Inner membrane protein YidH K00389 yidH; putative membrane protein
D I601_1060 Membrane protein of unknown function K08972 K08972; putative membrane protein
D I601_0936 hypothetical protein K08974 K08974; putative membrane protein
D I601_0195 Bacterial membrane flanked domain protein K08981 K08981; putative membrane protein
D I601_3174 hypothetical protein K08982 K08982; putative membrane protein
D I601_3176 hypothetical protein K08982 K08982; putative membrane protein
D I601_2001 hypothetical protein K09858 K09858; SEC-C motif domain protein
D I601_4076 hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D I601_2312 NYN domain protein K06860 K06860; putative heme uptake system protein
D I601_4042 Ankyrin repeats (3 copies) K06867 K06867; uncharacterized protein
D I601_3352 Ankyrin repeat protein K06867 K06867; uncharacterized protein
D I601_0961 Alpha/beta hydrolase family protein K06889 K06889; uncharacterized protein
D I601_0174 hypothetical protein K06929 K06929; uncharacterized protein
D I601_1081 protoporphyrinogen oxidase K06954 K06954; uncharacterized protein
D I601_2529 hypothetical protein K06960 K06960; uncharacterized protein
D I601_0850 Acetyltransferase (GNAT) family protein K06975 K06975; uncharacterized protein
D I601_2599 mshD_5; Mycothiol acetyltransferase K06976 K06976; uncharacterized protein
D I601_1225 Succinylglutamate desuccinylase / Aspartoacylase family protein K06987 K06987; uncharacterized protein
D I601_3012 Glyoxalase-like domain protein K06996 K06996; uncharacterized protein
D I601_2393 Pyridoxamine 5'-phosphate oxidase K07005 K07005; uncharacterized protein
D I601_2812 Pyridoxamine 5'-phosphate oxidase K07005 K07005; uncharacterized protein
D I601_2000 Pyridoxamine 5'-phosphate oxidase K07005 K07005; uncharacterized protein
D I601_1897 Pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D I601_3971 Alpha/beta hydrolase family protein K07020 K07020; uncharacterized protein
D I601_2446 Glyoxalase-like domain protein K07032 K07032; uncharacterized protein
D I601_2095 Amidohydrolase K07045 K07045; uncharacterized protein
D I601_2262 Amidohydrolase K07045 K07045; uncharacterized protein
D I601_3396 Putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D I601_3457 hypothetical protein K07068 K07068; uncharacterized protein
D I601_1165 hypothetical protein K07068 K07068; uncharacterized protein
D I601_1993 hypothetical protein K07068 K07068; uncharacterized protein
D I601_0653 hypothetical protein K07068 K07068; uncharacterized protein
D I601_2878 Epimerase family protein K07071 K07071; uncharacterized protein
D I601_1781 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D I601_3568 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D I601_2012 hypothetical protein K07090 K07090; uncharacterized protein
D I601_1463 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D I601_4019 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D I601_3373 hypothetical protein K07090 K07090; uncharacterized protein
D I601_0555 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D I601_1905 hypothetical protein K07093 K07093; uncharacterized protein
D I601_3834 hypothetical protein K07093 K07093; uncharacterized protein
D I601_1558 hypothetical protein K07095 K07095; uncharacterized protein
D I601_1534 phosphodiesterase YaeI K07098 K07098; uncharacterized protein
D I601_0083 putative oxidoreductase K07124 K07124; uncharacterized protein
D I601_0576 acr1_1; Fatty acyl-CoA reductase K07124 K07124; uncharacterized protein
D I601_1010 MOSC domain protein K07140 K07140; MOSC domain-containing protein
D I601_3626 hypothetical protein K07149 K07149; uncharacterized protein
D I601_3670 ydfK; putative membrane protein YdfK K07150 K07150; uncharacterized protein
D I601_2749 lon; Lon protease K07157 K07157; uncharacterized protein
D I601_0521 VWA domain containing CoxE-like protein K07161 K07161; uncharacterized protein
D I601_1501 VWA domain containing CoxE-like protein K07161 K07161; uncharacterized protein
D I601_3698 Putative zinc ribbon domain protein K07164 K07164; uncharacterized protein
D I601_1270 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D I601_3245 hypothetical protein K08999 K08999; uncharacterized protein
D I601_1978 hypothetical protein K09009 K09009; uncharacterized protein
D I601_1535 glutamyl-tRNA(Gln) amidotransferase subunit E K09117 K09117; uncharacterized protein
D I601_0046 hypothetical protein K09118 K09118; uncharacterized protein
D I601_2535 hypothetical protein K09166 K09166; uncharacterized protein
D I601_0194 Bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein
D I601_1314 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 K09386; uncharacterized protein
D I601_3276 hypothetical protein K09763 K09763; uncharacterized protein
D I601_0142 yedI; Inner membrane protein YedI K09781 K09781; uncharacterized protein
D I601_0145 hypothetical protein K09791 K09791; uncharacterized protein
D I601_2758 hypothetical protein K09861 K09861; uncharacterized protein
D I601_3476 bioC_2; Malonyl-[acyl-carrier protein] O-methyltransferase K09915 K09915; uncharacterized protein
D I601_0134 hypothetical protein K09927 K09927; uncharacterized protein
D I601_2111 hypothetical protein K09927 K09927; uncharacterized protein
D I601_2918 cofC_2; 2-phospho-L-lactate guanylyltransferase K09931 K09931; uncharacterized protein
D I601_0907 Antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein
D I601_3808 hypothetical protein K09940 K09940; uncharacterized protein
D I601_1711 Putative pit accessory protein K07220 K07220; uncharacterized protein
D I601_0400 hypothetical protein K07586 ygaC; uncharacterized protein
D I601_2609 hypothetical protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 1, 2024