+D GENES KO
#
KEGG Orthology (KO) - Paracoccus aminovorans
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pamn00010]
D JCM7685_2922 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D JCM7685_2100 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JCM7685_2305 sugar kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D pAMV3p0033 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JCM7685_2070 glpX; fructose-1,6-bisphosphatase II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D JCM7685_1214 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D pAMV3p0032 Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JCM7685_1289 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JCM7685_0694 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JCM7685_1144 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JCM7685_1217 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JCM7685_0461 gpmI; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JCM7685_1856 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JCM7685_0474 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JCM7685_2568 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JCM7685_2137 acoA; pyruvate dehydrogenase E1 component, subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JCM7685_2138 acoB; pyruvate dehydrogenase E1 component, subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JCM7685_2139 aceF; pyruvate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D pAMV3p0452 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2492 lpd1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2556 lpd3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_0201 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D pAMV3p0282 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2831 putA3; Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D pAMV3p0524 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JCM7685_2989 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JCM7685_1172 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JCM7685_1070 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:pamn00020]
D JCM7685_1508 gltA; citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D JCM7685_1295 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JCM7685_2475 icd; isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JCM7685_2551 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D JCM7685_2552 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D pAMV3p0452 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2492 lpd1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2556 lpd3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2549 sucD; succinyl-CoA synthetase, subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JCM7685_2547 sucC; succinyl-CoA synthetase, subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JCM7685_2538 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JCM7685_2535 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JCM7685_2540 sdhC; succinate dehydrogenase, cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JCM7685_2539 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JCM7685_1229 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JCM7685_2546 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JCM7685_0986 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JCM7685_1070 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JCM7685_2137 acoA; pyruvate dehydrogenase E1 component, subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JCM7685_2138 acoB; pyruvate dehydrogenase E1 component, subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JCM7685_2139 aceF; pyruvate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:pamn00030]
D JCM7685_2100 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JCM7685_2102 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JCM7685_2101 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D JCM7685_0399 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JCM7685_1802 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JCM7685_0470 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JCM7685_1563 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D JCM7685_2132 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D JCM7685_0658 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D JCM7685_0884 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D JCM7685_1172 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JCM7685_1910 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JCM7685_2105 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D JCM7685_1826 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D pAMV3p0014 gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D pAMV1p0136 gck; glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D JCM7685_1214 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D pAMV3p0032 Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D pAMV3p0033 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JCM7685_2070 glpX; fructose-1,6-bisphosphatase II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D JCM7685_2305 sugar kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:pamn00040]
D JCM7685_0173 ugd1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JCM7685_2345 ugd3; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JCM7685_0668 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JCM7685_0399 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JCM7685_0946 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D JCM7685_1846 hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D JCM7685_0945 xylitol dehydrogenase K05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9]
D pAMV1p0046 araE; putative alpha-ketoglutaric semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D pAMV3p0526 carbohydrate kinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:pamn00051]
D JCM7685_1008 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JCM7685_1838 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D JCM7685_2614 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JCM7685_1749 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D JCM7685_1750 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D JCM7685_2305 sugar kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D pAMV3p0033 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JCM7685_2070 glpX; fructose-1,6-bisphosphatase II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D pAMV3p0528 mtlK; Mannitol 2-dehydrogenase K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67]
D JCM7685_1214 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D pAMV3p0032 Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JCM7685_1289 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JCM7685_1073 phosphotransferase system, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:pamn00052]
D JCM7685_2989 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JCM7685_0763 UDP-glucuronate 5'-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JCM7685_2727 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JCM7685_0669 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JCM7685_0375 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JCM7685_0668 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JCM7685_1172 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JCM7685_2922 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D pAMV3p0541 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D JCM7685_2305 sugar kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D pAMV1p0045 araA; L-arabinose/D-galactose dehydrogenase K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48]
D JCM7685_2986 dgoK; 2-keto-3-deoxy-galactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D JCM7685_2987 dgoA; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
C 00053 Ascorbate and aldarate metabolism [PATH:pamn00053]
D JCM7685_0173 ugd1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JCM7685_2345 ugd3; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JCM7685_2346 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D pAMV1p0044 araC; putative L-arabonate dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D pAMV1p0046 araE; putative alpha-ketoglutaric semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D JCM7685_3051 2-pyrone-4,6-dicarboxylic acid hydrolase K18982 gli; D-galactarolactone isomerase [EC:5.4.1.4]
C 00500 Starch and sucrose metabolism [PATH:pamn00500]
D JCM7685_0668 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D pAMV3p0491 Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JCM7685_1168 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JCM7685_1169 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JCM7685_1167 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JCM7685_1166 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D pAMV3p0493 Glucan 1,4-alpha-glucosidase K01178 SGA1; glucoamylase [EC:3.2.1.3]
D JCM7685_1171 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D JCM7685_1170 glgX; glycogen debranching protein K01214 ISA; isoamylase [EC:3.2.1.68]
D pAMV3p0118 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D pAMV3p0120 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D JCM7685_1172 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JCM7685_2922 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D JCM7685_2100 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JCM7685_1008 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pamn00520]
D JCM7685_2062 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JCM7685_0696 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D JCM7685_0698 glucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D JCM7685_1008 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JCM7685_0697 glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JCM7685_2484 glmS; glucosamine-fructose-6-phosphateaminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JCM7685_2564 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D JCM7685_2485 glmU; N-acetylglucosamine-1-phosphateuridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JCM7685_1224 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D JCM7685_0365 hypothetical protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D JCM7685_0364 nucleotidyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D JCM7685_2111 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JCM7685_1118 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JCM7685_2922 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D JCM7685_1172 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JCM7685_0668 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JCM7685_0173 ugd1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JCM7685_2345 ugd3; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JCM7685_0377 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D JCM7685_0763 UDP-glucuronate 5'-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JCM7685_2727 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JCM7685_0669 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JCM7685_0375 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D pAMV3p0541 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D JCM7685_2346 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D JCM7685_1073 phosphotransferase system, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D JCM7685_2100 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JCM7685_2614 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JCM7685_1838 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D JCM7685_1749 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D JCM7685_1750 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D JCM7685_1751 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D JCM7685_1168 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:pamn00620]
D pAMV3p0524 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JCM7685_2137 acoA; pyruvate dehydrogenase E1 component, subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JCM7685_2138 acoB; pyruvate dehydrogenase E1 component, subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JCM7685_2139 aceF; pyruvate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D pAMV3p0452 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2492 lpd1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2556 lpd3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D pAMV3p0282 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JCM7685_0201 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D pAMV3p0519 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D pAMV3p0520 ptb; Phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D pAMV3p0580 ptaS; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D pAMV3p0401 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JCM7685_0474 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JCM7685_0648 acetyl-CoA carboxylase, subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JCM7685_1805 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JCM7685_1806 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JCM7685_0828 acetyl-CoA carboxylase, subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D pAMV3p0048 biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2831 putA3; Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D JCM7685_1873 L-lactate dehydrogenase (cytochrome) K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D JCM7685_0920 D-lactate dehydrogenase (cytochrome) K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D pAMV3p0128 aldA; aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D JCM7685_1956 glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D JCM7685_0587 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D pAMV3p0166 Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D JCM7685_1920 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D JCM7685_0332 hchA; heat shock protein HSP31 and glyoxalase 3 K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D JCM7685_1837 gyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D JCM7685_0881 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D JCM7685_2634 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D JCM7685_0986 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JCM7685_2546 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JCM7685_1229 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D pAMV1p0129 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D JCM7685_1070 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JCM7685_2568 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JCM7685_1847 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D pAMV1p0018 aceB; malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D JCM7685_2904 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_1051 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0029 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_2399 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0648 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_0786 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_1830 leuA1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D JCM7685_1858 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D JCM7685_2388 leuA3; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pamn00630]
D pAMV1p0017 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D pAMV3p0524 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JCM7685_1847 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D pAMV1p0018 aceB; malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D JCM7685_2546 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JCM7685_1508 gltA; citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D JCM7685_1295 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D pAMV1p0131 mtkA; malate-CoA ligase subunit alpha K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9]
D pAMV1p0132 mtkB; malate-CoA ligase subunit beta K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9]
D JCM7685_2904 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_1051 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0029 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_2399 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0648 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_0786 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_0785 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D JCM7685_1556 acyl dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D JCM7685_1439 crotonyl-CoA reductase K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85]
D JCM7685_0930 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JCM7685_2154 methylmalonyl-CoA mutase K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D JCM7685_1082 acyl-CoA dehydrogenase K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12]
D JCM7685_2542 acyl dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D pAMV1p0135 mcl; malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D JCM7685_2683 malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D pAMV3p0611 mcal; Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D JCM7685_2545 citryl-CoA lyase K14451 mcl2; (3S)-malyl-CoA thioesterase [EC:3.1.2.30]
D JCM7685_1581 propionyl-CoA carboxylase, alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D JCM7685_1587 propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D pAMV3p0048 biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JCM7685_1577 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D pAMV1p0141 katE; catalase C K03781 katE; catalase [EC:1.11.1.6]
D JCM7685_2087 glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D JCM7685_1837 gyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D JCM7685_1643 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D JCM7685_2691 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D JCM7685_2486 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D JCM7685_1476 serine-glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D JCM7685_0581 aminotransferase, partial K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D JCM7685_1149 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1494 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1794 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D pAMV1p0128 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JCM7685_1189 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JCM7685_2810 gcvP; Glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D pAMV1p0113 tmd; trimethylamine-N-oxide demethylase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D pAMV1p0115 dmmD; putative dimethylamine monooxygenase subunit D K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D pAMV3p0189 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JCM7685_2812 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D pAMV3p0452 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2492 lpd1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2556 lpd3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2811 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D pAMV1p0136 gck; glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D pAMV3p0128 aldA; aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D JCM7685_1826 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D JCM7685_1970 formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D JCM7685_1067 NAD-dependent formate dehydrogenase, delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D JCM7685_1065 NAD-dependent formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D JCM7685_0219 molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D JCM7685_0220 fdhA; Formate dehydrogenase, subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D JCM7685_0221 fdoH; Formate dehydrogenase, subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D JCM7685_1064 NAD-dependent formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D JCM7685_0222 formate dehydrogenase, subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D JCM7685_1063 NAD-dependent formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D pAMV1p0125 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D JCM7685_0295 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D JCM7685_0286 dmfA1; putative N,N-dimethylformamidase alpha subunit K25305 dmfA1; N,N-dimethylformamidase small subunit [EC:3.5.1.56]
C 00640 Propanoate metabolism [PATH:pamn00640]
D pAMV3p0524 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JCM7685_0880 acyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D pAMV3p0519 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D pAMV3p0520 ptb; Phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D pAMV3p0580 ptaS; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D pAMV3p0401 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D pAMV3p0449 odbA; 3-methyl-2-oxobutanoate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D pAMV3p0450 odbB; 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D pAMV3p0451 odb2; 2-oxoisovalerate dehydrogenase E2 component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D pAMV3p0452 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2492 lpd1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2556 lpd3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_1049 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JCM7685_0648 acetyl-CoA carboxylase, subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JCM7685_1805 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JCM7685_1806 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JCM7685_0828 acetyl-CoA carboxylase, subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D pAMV3p0048 biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JCM7685_0004 matA; malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D JCM7685_0647 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D JCM7685_1581 propionyl-CoA carboxylase, alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D JCM7685_1587 propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D JCM7685_0930 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JCM7685_1577 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D JCM7685_2547 sucC; succinyl-CoA synthetase, subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JCM7685_2549 sucD; succinyl-CoA synthetase, subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JCM7685_1130 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D pAMV1p0005 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D pAMV1p0006 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D pAMV1p0004 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:pamn00650]
D JCM7685_2904 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_1051 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0029 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_2399 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0648 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_0786 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0623 3-hydroxybutyryl-CoA dehydrogenase, partial K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JCM7685_0419 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JCM7685_1049 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JCM7685_1091 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D JCM7685_1556 acyl dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D JCM7685_2266 polyhydroxyalkanoate synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D JCM7685_2267 poly(3-hydroxybutyrate) depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D JCM7685_0785 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D JCM7685_2538 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JCM7685_2535 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JCM7685_2540 sdhC; succinate dehydrogenase, cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JCM7685_2539 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JCM7685_0647 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D JCM7685_1687 aminotransferase K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D JCM7685_0496 gabD; succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JCM7685_2169 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JCM7685_0541 succinyl-CoA:3-ketoacid coenzyme A transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D pAMV3p0379 scoA; Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JCM7685_0542 succinyl-CoA:3-ketoacid coenzyme A transferase, subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D pAMV3p0378 scoB; succinyl-CoA:3-ketoacid-CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JCM7685_1366 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D JCM7685_0510 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JCM7685_0939 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JCM7685_0938 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D pAMV3p0150 bdhA; (R,R)-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:pamn00660]
D JCM7685_0510 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JCM7685_0939 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JCM7685_0938 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JCM7685_2547 sucC; succinyl-CoA synthetase, subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JCM7685_2549 sucD; succinyl-CoA synthetase, subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D pAMV1p0135 mcl; malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D JCM7685_2683 malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D pAMV3p0611 mcal; Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D JCM7685_2542 acyl dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D JCM7685_0447 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JCM7685_0445 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JCM7685_0613 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pamn00562]
D JCM7685_2930 cysQ; 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JCM7685_0570 suhB; inositol-1(or 4)-monophosphatas K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JCM7685_1130 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JCM7685_1289 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pamn00190]
D JCM7685_0853 nuoA; NADH dehydrogenase I, subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D JCM7685_0854 nuoB; NADH dehydrogenase I, subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D JCM7685_0855 nuoC; NADH dehydrogenase I, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D JCM7685_0857 nuoD; NADH dehydrogenase I, subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D JCM7685_0858 nuoE; NADH dehydrogenase I, subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D JCM7685_0861 nuoF; NADH dehydrogenase I, subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D JCM7685_2337 NADH dehydrogenase (ubiquinone), subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D JCM7685_0864 nuoG; NADH dehydrogenase I, subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D JCM7685_0866 nuoH; NADH dehydrogenase I, subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D JCM7685_0868 nuoI; NADH dehydrogenase I, subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D JCM7685_0870 nuoJ; NADH dehydrogenase I, subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D JCM7685_0871 nuoK; NADH dehydrogenase I, subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D JCM7685_0872 nuoL; NADH dehydrogenase I, subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D JCM7685_0873 nuoM; NADH dehydrogenase I, subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D JCM7685_0874 nuoN; NADH dehydrogenase I, subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D JCM7685_2538 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JCM7685_2535 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JCM7685_2540 sdhC; succinate dehydrogenase, cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JCM7685_2539 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JCM7685_0661 ubiquinol-cytochrome C reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D JCM7685_0660 ubiquinol-cytochrome C reductase, cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D JCM7685_0659 ubiquinol-cytochrome C reductase, cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D JCM7685_1275 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D pAMV3p0070 cyoD; cytochrome c oxidase, subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D JCM7685_1278 ctaE; cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D JCM7685_2084 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D JCM7685_1274 ctaC; cytochrome-c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D JCM7685_1277 ctaG; cytochrome C oxidase subunit XI assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D JCM7685_1599 ctaA; heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D JCM7685_2031 ccoN; cbb3-type cytochrome c oxidase, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D JCM7685_2030 ccoO; cbb3-type cytochrome c oxidase, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D JCM7685_2029 ccoQ; cbb3-type cytochrome c oxidase, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D JCM7685_2028 ccoP; cbb3-type cytochrome c oxidase, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D pAMV3p0071 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D pAMV3p0072 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D pAMV3p0073 cyoA; cytochrome o ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D pAMV3p0621 cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D pAMV3p0620 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JCM7685_2222 cytochrome c-552 K08738 CYC; cytochrome c
D JCM7685_2083 cycA; cytochrome c550 K08738 CYC; cytochrome c
D JCM7685_1917 atpA; F-type H+-transporting ATPase, subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JCM7685_1915 atpD; F-type H+-transporting ATPase, subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JCM7685_1916 atpG; F-type H+-transporting ATPase, subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JCM7685_1918 atpH; F-type H+-transporting ATPase, subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JCM7685_1914 atpC; F-type H+-transporting ATPase, subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JCM7685_1041 atpB; ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JCM7685_1043 atpF1; ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JCM7685_1044 atpF3; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JCM7685_1042 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JCM7685_1554 inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D JCM7685_1745 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D JCM7685_1339 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D JCM7685_1105 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D JCM7685_1501 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:pamn00710]
D JCM7685_1217 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JCM7685_0694 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JCM7685_1144 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JCM7685_1214 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D pAMV3p0032 Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D pAMV3p0033 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JCM7685_2070 glpX; fructose-1,6-bisphosphatase II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D JCM7685_1802 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JCM7685_1563 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D pAMV3p0546 kppR; Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D JCM7685_1289 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JCM7685_0399 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D pAMV1p0129 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D JCM7685_1070 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JCM7685_2568 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JCM7685_0881 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D JCM7685_2634 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D JCM7685_2546 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:pamn00680]
D JCM7685_0197 methanol dehydrogenase K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10]
D JCM7685_1058 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D JCM7685_0202 gfa; S-(hydroxymethyl)glutathione synthase K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22]
D JCM7685_0201 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JCM7685_0198 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D JCM7685_1970 formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D JCM7685_1065 NAD-dependent formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D JCM7685_0219 molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D JCM7685_0220 fdhA; Formate dehydrogenase, subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D JCM7685_0221 fdoH; Formate dehydrogenase, subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D JCM7685_1064 NAD-dependent formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D JCM7685_0222 formate dehydrogenase, subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D JCM7685_1063 NAD-dependent formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D JCM7685_1067 NAD-dependent formate dehydrogenase, delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D pAMV1p0128 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JCM7685_1189 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JCM7685_1476 serine-glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D JCM7685_0581 aminotransferase, partial K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D pAMV1p0136 gck; glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D JCM7685_1856 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D pAMV1p0129 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D JCM7685_2546 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D pAMV1p0131 mtkA; malate-CoA ligase subunit alpha K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9]
D pAMV1p0132 mtkB; malate-CoA ligase subunit beta K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9]
D pAMV1p0135 mcl; malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D JCM7685_2683 malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D pAMV3p0611 mcal; Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D JCM7685_1214 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D pAMV3p0032 Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D pAMV3p0033 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JCM7685_2070 glpX; fructose-1,6-bisphosphatase II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D JCM7685_2305 sugar kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D pAMV3p0194 tmd; Trimethylamine dehydrogenase K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2]
D pAMV3p0110 dmd; Dimethylamine dehydrogenase K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2]
D pAMV1p0112 tmm; trimethylamine monooxygenase K18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148]
D pAMV1p0106 mgsA; N-methylglutamate synthase subunit A K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21]
D pAMV1p0107 mgsB; N-methylglutamate synthase subunit B K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21]
D pAMV1p0108 mgsC; N-methylglutamate synthase subunit C K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D pAMV1p0120 mgdA; N-methylglutamate dehydrogenase subunit A K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5]
D pAMV1p0121 mgdB; N-methylglutamate dehydrogenase subunit B K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5]
D pAMV1p0122 mgdC; N-methylglutamate dehydrogenase subunit C K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5]
D pAMV1p0123 mgdD; N-methylglutamate dehydrogenase subunit D K22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5]
D pAMV3p0519 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D pAMV3p0520 ptb; Phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D pAMV3p0580 ptaS; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D pAMV3p0401 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D pAMV3p0524 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JCM7685_0461 gpmI; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JCM7685_2668 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JCM7685_2669 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JCM7685_2670 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D pAMV3p0238 trimethylamine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
C 00910 Nitrogen metabolism [PATH:pamn00910]
D pAMV3p0441 narK; nitrite transporter, NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D pAMV3p0442 narG; nitrate reductase A subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D pAMV3p0443 narH; nitrate reductase A subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D pAMV3p0445 narI; nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D pAMV3p0223 nirS; Nitrite reductase K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
D pAMV1p0147 norB; nitric oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D pAMV1p0146 norC; nitric oxide reductase subunit C, cytochrome C K02305 norC; nitric oxide reductase subunit C
D pAMV1p0035 nosZ; nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D JCM7685_1998 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D JCM7685_0388 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D JCM7685_1370 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JCM7685_1438 gdhA; glutamate dehydrogenase (NADP+) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JCM7685_1149 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1494 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1794 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_0701 Glutamate synthase (NADPH/NADH), large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JCM7685_0703 glutamate synthase (NADPH/NADH), small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JCM7685_2941 cynT; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pamn00920]
D JCM7685_2209 cysP3; sulfate ABC transporter, periplasmic protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D JCM7685_1257 cysP1; sulfate ABC transporter, periplasmic component K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D JCM7685_2210 cysU; sulfate ABC transporter, permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D JCM7685_1258 cysT; sulfate ABC transporter, permease component K02046 cysU; sulfate/thiosulfate transport system permease protein
D JCM7685_2211 cysW3; sulfate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D JCM7685_1259 cysW1; sulfate ABC transporter, permease component K02047 cysW; sulfate/thiosulfate transport system permease protein
D JCM7685_2208 cysA3; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D JCM7685_1260 cysA1; sulfate/molybdate ABC transporter, ATPase component K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D pAMV3p0125 tauA; taurine ABC transporter, periplasmic taurine-binding protein K15551 tauA; taurine transport system substrate-binding protein
D pAMV3p0127 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein
D pAMV3p0126 tauB; Taurine import ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D pAMV3p0487 ssuA; aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D JCM7685_1974 tauA1; nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D pAMV3p0488 ssuC; aliphatic sulfonates transport permease protein ssuC K15554 ssuC; sulfonate transport system permease protein
D JCM7685_1972 tauC1; nitrate/sulfonate/bicarbonate ABC transporter, permease K15554 ssuC; sulfonate transport system permease protein
D pAMV3p0489 ssuB; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D JCM7685_1973 tauB1; nitrate/sulfonate/bicarbonate ABC transporter, ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D pAMV3p0484 ssuD; Alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D pAMV3p0486 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D pAMV3p0092 cysN; Sulfate adenylyltransferase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D pAMV3p0093 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JCM7685_0898 adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JCM7685_0666 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D JCM7685_0535 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D JCM7685_2822 hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY
D JCM7685_2246 sulfite reductase, alpha subunit (flavoprotein) K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D JCM7685_0534 nitrite/sulfite reductase hemoprotein beta subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D JCM7685_0507 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JCM7685_1034 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JCM7685_1754 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JCM7685_1427 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D pAMV1p0075 cysteine synthase-like protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JCM7685_1106 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D pAMV3p0116 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JCM7685_1981 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D JCM7685_2156 fatty-acyl-CoA synthase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D JCM7685_1053 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D JCM7685_2752 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pamn00061]
D JCM7685_0648 acetyl-CoA carboxylase, subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JCM7685_1805 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JCM7685_1806 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JCM7685_0828 acetyl-CoA carboxylase, subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D pAMV3p0048 biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JCM7685_1324 acyl carrier protein K02078 acpP; acyl carrier protein
D JCM7685_1637 acyl carrier protein K02078 acpP; acyl carrier protein
D JCM7685_1322 fabD; malonyl-CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JCM7685_2043 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JCM7685_1930 fabB3; 3-oxoacyl-(acyl-carrier-protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D JCM7685_1014 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JCM7685_1323 fabG1; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JCM7685_2813 fabG3; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D pAMV3p0122 NAD dependent epimerase/dehydratase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JCM7685_1929 fabA; 3-hydroxydecanoyl-(acyl-carrier-protein)dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D JCM7685_2123 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JCM7685_2330 fabI3; enoyl-(acyl-carrier protein) reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D JCM7685_1931 fabI1; enoyl-(acyl-carrier protein) reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D pAMV3p0028 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pamn00071]
D JCM7685_2904 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_1051 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0029 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_2399 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0648 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_0786 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_1049 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D pAMV3p0075 gcdh; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D pAMV3p0028 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JCM7685_2586 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D JCM7685_2099 alkane 1-hydroxylase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D JCM7685_0632 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D JCM7685_0201 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D pAMV3p0282 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:pamn00121]
D JCM7685_2020 3-ketoacyl-(acyl-carrier-protein) reductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pamn00561]
D pAMV1p0136 gck; glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D pAMV3p0102 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JCM7685_2042 plsX; glycerol-3-phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JCM7685_0418 plsY; Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JCM7685_0797 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JCM7685_0377 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:pamn00564]
D JCM7685_0814 gpsA; glycerol-3-phosphate dehydrogenase(NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D pAMV3p0095 glpD; Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D JCM7685_0418 plsY; Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JCM7685_0797 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JCM7685_2733 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D JCM7685_1343 lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D JCM7685_1613 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D pAMV3p0023 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D JCM7685_2671 phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D JCM7685_1561 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D JCM7685_0829 phospholipase D/transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D JCM7685_0651 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D JCM7685_0747 carboxylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pamn00230]
D JCM7685_0884 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D JCM7685_1172 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JCM7685_1910 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JCM7685_1735 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JCM7685_1829 purD; phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D JCM7685_1482 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JCM7685_1700 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D JCM7685_1061 purS; phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D JCM7685_2474 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JCM7685_1481 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D JCM7685_0907 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D JCM7685_0906 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D JCM7685_1060 purC; phosphoribosylaminoimidazole-succinocarboxamidesynthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D JCM7685_1147 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JCM7685_2954 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JCM7685_2188 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JCM7685_1037 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JCM7685_2969 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JCM7685_0752 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JCM7685_0895 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JCM7685_2515 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JCM7685_2012 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JCM7685_0206 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D JCM7685_2332 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D JCM7685_2201 xanthine dehydrogenase, small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D JCM7685_2202 xdhA; xanthine dehydrogenase, small subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D JCM7685_1596 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JCM7685_2204 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D JCM7685_1491 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D pAMV3p0262 nrdE; Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JCM7685_2273 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JCM7685_1302 nrdJ; ribonucleoside-diphosphate reductase, subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D pAMV3p0263 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JCM7685_1198 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D JCM7685_2097 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D JCM7685_0351 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D JCM7685_1797 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JCM7685_1606 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D JCM7685_1744 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D JCM7685_2502 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JCM7685_0885 adenine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D JCM7685_2780 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D JCM7685_1086 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D JCM7685_2225 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D JCM7685_1095 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D JCM7685_2701 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JCM7685_1785 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D pAMV3p0092 cysN; Sulfate adenylyltransferase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D pAMV3p0093 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JCM7685_0898 adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JCM7685_1471 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D pAMV3p0198 Hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D JCM7685_1987 chitin deacetylase K16842 hpxB; allantoinase [EC:3.5.2.5]
D JCM7685_1988 hypothetical protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D JCM7685_2589 ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D JCM7685_2991 5-carboxymethyl-2-hydroxymuconate delta-isomerase K16856 ugl; ureidoglycolate lyase [EC:4.3.2.3]
C 00240 Pyrimidine metabolism [PATH:pamn00240]
D JCM7685_1262 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JCM7685_0943 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JCM7685_0415 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JCM7685_0417 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JCM7685_1142 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JCM7685_1035 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D JCM7685_1141 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D JCM7685_0159 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D JCM7685_1610 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D JCM7685_2012 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JCM7685_1785 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JCM7685_1535 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D JCM7685_1504 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D JCM7685_1999 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D JCM7685_1037 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JCM7685_2969 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JCM7685_0886 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D JCM7685_2225 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D JCM7685_1095 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D JCM7685_0882 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D pAMV3p0140 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D JCM7685_2049 2'-deoxycytidine 5'-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D pAMV3p0262 nrdE; Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JCM7685_2273 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JCM7685_1302 nrdJ; ribonucleoside-diphosphate reductase, subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D pAMV3p0263 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JCM7685_0351 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D JCM7685_0960 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D JCM7685_2093 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JCM7685_0883 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D JCM7685_2010 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D JCM7685_1957 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pamn00250]
D JCM7685_1953 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0506 tyrB; Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_1164 nadB; L-aspartate oxidase, NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D pAMV3p0065 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JCM7685_1476 serine-glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D JCM7685_0581 aminotransferase, partial K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D JCM7685_0489 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D JCM7685_1934 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D JCM7685_0714 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JCM7685_0790 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JCM7685_2502 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JCM7685_1147 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JCM7685_0415 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JCM7685_0647 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D JCM7685_1687 aminotransferase K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D JCM7685_0496 gabD; succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JCM7685_0701 Glutamate synthase (NADPH/NADH), large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JCM7685_0703 glutamate synthase (NADPH/NADH), small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JCM7685_1370 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JCM7685_1438 gdhA; glutamate dehydrogenase (NADP+) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JCM7685_1369 putA1; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JCM7685_1149 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1494 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1794 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1262 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JCM7685_0943 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JCM7685_2474 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JCM7685_0697 glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JCM7685_2484 glmS; glucosamine-fructose-6-phosphateaminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JCM7685_1735 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pamn00260]
D JCM7685_2321 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JCM7685_3013 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JCM7685_1573 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JCM7685_1280 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JCM7685_1559 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D pAMV1p0128 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JCM7685_1189 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JCM7685_1476 serine-glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D JCM7685_0581 aminotransferase, partial K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D JCM7685_1837 gyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D pAMV1p0136 gck; glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D JCM7685_0461 gpmI; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JCM7685_2668 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JCM7685_2669 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JCM7685_2670 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D JCM7685_1352 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D JCM7685_2810 gcvP; Glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D pAMV1p0113 tmd; trimethylamine-N-oxide demethylase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D pAMV1p0115 dmmD; putative dimethylamine monooxygenase subunit D K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D pAMV3p0189 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JCM7685_2812 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D pAMV3p0452 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2492 lpd1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2556 lpd3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2811 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D JCM7685_2117 creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D pAMV3p0177 Creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D JCM7685_1241 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D JCM7685_1240 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D JCM7685_0731 soxA; sarcosine oxidase, subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D JCM7685_0728 soxB; sarcosine oxidase, subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D JCM7685_0732 soxG; sarcosine oxidase, gamma subunit K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D JCM7685_0730 soxD; sarcosine oxidase, subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D JCM7685_0998 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JCM7685_0711 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D pAMV3p0272 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JCM7685_1992 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pamn00270]
D JCM7685_1034 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JCM7685_1754 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JCM7685_1427 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D pAMV1p0075 cysteine synthase-like protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JCM7685_2371 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JCM7685_0527 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JCM7685_1720 5-methyltetrahydrofolate-homocysteinemethyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JCM7685_2081 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D pAMV3p0233 methyltetrahydrofolate:corrinoidmethyltransfera se K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D pAMV3p0607 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D JCM7685_2067 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JCM7685_0346 5'-methylthioadenosine/S-adenosylhomocysteinenucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D JCM7685_0895 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JCM7685_0373 diguanylate cyclase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D JCM7685_1423 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JCM7685_0776 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JCM7685_2924 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JCM7685_2321 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JCM7685_3013 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JCM7685_1573 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JCM7685_1106 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D pAMV3p0116 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JCM7685_2079 O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D JCM7685_1981 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D JCM7685_0307 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JCM7685_1077 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D JCM7685_1712 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D JCM7685_1953 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0506 tyrB; Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0507 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JCM7685_2546 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JCM7685_0998 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JCM7685_2668 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JCM7685_2669 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pamn00280]
D JCM7685_0307 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D pAMV3p0449 odbA; 3-methyl-2-oxobutanoate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D pAMV3p0450 odbB; 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D pAMV3p0451 odb2; 2-oxoisovalerate dehydrogenase E2 component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D pAMV3p0452 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2492 lpd1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2556 lpd3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2177 caiA; isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D JCM7685_1049 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JCM7685_1581 propionyl-CoA carboxylase, alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D JCM7685_1587 propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D pAMV3p0048 biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JCM7685_0930 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JCM7685_1577 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D JCM7685_1620 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JCM7685_1127 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JCM7685_1130 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_0679 acyl-CoA synthetase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D JCM7685_0003 matB; Malonyl-CoA synthetase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D JCM7685_2171 3-methylcrotonyl-CoA carboxylase, subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D JCM7685_2173 3-methylcrotonyl-CoA carboxylase, subunit beta K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D JCM7685_2168 enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D JCM7685_2169 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JCM7685_0541 succinyl-CoA:3-ketoacid coenzyme A transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D pAMV3p0379 scoA; Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JCM7685_0542 succinyl-CoA:3-ketoacid coenzyme A transferase, subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D pAMV3p0378 scoB; succinyl-CoA:3-ketoacid-CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JCM7685_2904 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_1051 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0029 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_2399 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0648 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_0786 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pamn00290]
D JCM7685_0711 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D JCM7685_0447 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JCM7685_0445 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JCM7685_0613 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D JCM7685_0510 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JCM7685_0939 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JCM7685_0938 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JCM7685_1328 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D pAMV3p0021 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D JCM7685_0307 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JCM7685_1830 leuA1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D JCM7685_1858 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D JCM7685_2388 leuA3; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pamn00300]
D JCM7685_1573 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JCM7685_2321 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JCM7685_3013 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D pAMV3p0577 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JCM7685_0567 dapA1; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JCM7685_0344 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JCM7685_2455 dapA3; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JCM7685_0366 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D JCM7685_0453 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D JCM7685_0768 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JCM7685_2135 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JCM7685_1080 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JCM7685_2790 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JCM7685_0792 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JCM7685_1757 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JCM7685_2520 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JCM7685_2519 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pamn00310]
D JCM7685_2552 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D pAMV3p0452 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2492 lpd1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2556 lpd3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D pAMV3p0075 gcdh; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JCM7685_1049 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JCM7685_2904 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_1051 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0029 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_2399 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0648 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_0786 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_0496 gabD; succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D pAMV3p0305 Lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D pAMV3p0380 3-keto-5-aminohexanoate cleavage enzyme K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D JCM7685_2684 D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:pamn00220]
D JCM7685_0770 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D JCM7685_0714 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JCM7685_0790 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JCM7685_2578 arginase K01476 rocF; arginase [EC:3.5.3.1]
D pAMV3p0336 arcA; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D JCM7685_2474 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JCM7685_1149 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1494 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1794 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1262 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JCM7685_0943 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JCM7685_1370 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JCM7685_1438 gdhA; glutamate dehydrogenase (NADP+) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JCM7685_1953 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0506 tyrB; Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0312 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D JCM7685_0833 acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D JCM7685_2307 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D pAMV3p0312 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D JCM7685_0768 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:pamn00330]
D pAMV3p0178 crnA; Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D pAMV3p0140 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D pAMV3p0204 hyuA; hydantoin utilization protein A K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D JCM7685_3037 hyuA; N-methylhydantoinase (ATP-hydrolyzing) A K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D pAMV3p0205 hyuB; hydantoin utilization protein B K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D JCM7685_3038 hyuB; N-methylhydantoinase B K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D JCM7685_2117 creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D pAMV3p0177 Creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D JCM7685_0012 speB; SpeB arginase/agmatinase/formimionoglutamate hydrolase K01480 speB; agmatinase [EC:3.5.3.11]
D JCM7685_0629 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D JCM7685_2479 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_1795 gamma-glutamylputrescine oxidase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D pAMV3p0576 puuC; Aldehyde dehydrogenase PuuC K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D JCM7685_0343 Aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D pAMV3p0330 ooxA; Opine oxidase subunit A K24954 ooxA; octopine oxidase subunit A
D pAMV3p0328 ooxB; opine oxidase subunit OoxB K24955 ooxB; octopine oxidase subunit B
D JCM7685_2578 arginase K01476 rocF; arginase [EC:3.5.3.1]
D pAMV3p0336 arcA; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D JCM7685_0910 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D pAMV1p0097 NADP oxidoreductase, pyrroline-5-carboxylate reductase-like protein K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D JCM7685_1369 putA1; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D pAMV3p0337 arcB; Ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D JCM7685_1851 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JCM7685_1102 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D JCM7685_0320 Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D JCM7685_1953 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0506 tyrB; Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_2684 D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:pamn00340]
D JCM7685_1208 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D JCM7685_1207 hisZ; ATP phosphoribosyltransferase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D JCM7685_1248 phosphoribosyl-ATP pyrophosphohydrolase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D JCM7685_1878 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D JCM7685_1250 hisA; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D JCM7685_1252 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D JCM7685_1249 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D JCM7685_1253 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D JCM7685_0531 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JCM7685_1775 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JCM7685_2109 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:pamn00350]
D JCM7685_1953 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0506 tyrB; Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0531 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JCM7685_1775 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JCM7685_2393 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D JCM7685_2391 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D JCM7685_2392 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D JCM7685_0201 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D pAMV3p0282 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JCM7685_1655 hpcG; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D JCM7685_1656 hpcH; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D JCM7685_0496 gabD; succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JCM7685_2963 faaH; fumarylacetoacetate (FAA) hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:pamn00360]
D JCM7685_1692 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D pAMV3p0623 3-hydroxybutyryl-CoA dehydrogenase, partial K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JCM7685_0419 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JCM7685_1953 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0506 tyrB; Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0531 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JCM7685_1775 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JCM7685_2677 dadA; D-amino acid dehydrogenase, small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D JCM7685_2684 D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D JCM7685_0695 catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D JCM7685_0632 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D JCM7685_2457 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00380 Tryptophan metabolism [PATH:pamn00380]
D JCM7685_2552 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D pAMV3p0452 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2492 lpd1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2556 lpd3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D pAMV3p0075 gcdh; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JCM7685_1049 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JCM7685_2904 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_1051 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0029 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_2399 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0648 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_0786 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D pAMV1p0141 katE; catalase C K03781 katE; catalase [EC:1.11.1.6]
D JCM7685_0695 catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pamn00400]
D JCM7685_1489 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JCM7685_1764 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D JCM7685_0170 aroQ1; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D JCM7685_1648 aroQ3; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D pAMV3p0386 4-hydroxyphenylpyruvate dioxygenase K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D JCM7685_0379 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D pAMV3p0147 quiA; Quinate/shikimate dehydrogenase (quinone) K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8]
D JCM7685_1765 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D JCM7685_0879 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D JCM7685_1264 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D JCM7685_0972 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JCM7685_0968 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D JCM7685_0967 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D JCM7685_1994 trpF; phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D JCM7685_0965 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D pAMV3p0272 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JCM7685_1992 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D JCM7685_2150 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D JCM7685_1774 prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D JCM7685_2223 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D JCM7685_1953 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0506 tyrB; Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0531 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JCM7685_1775 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pamn00410]
D JCM7685_0647 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D pAMV3p0310 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JCM7685_1049 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JCM7685_0004 matA; malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D JCM7685_1130 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:pamn00430]
D JCM7685_0539 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JCM7685_1928 taurine-pyruvate aminotransferase K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D JCM7685_0489 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D pAMV3p0397 transcriptional regulator K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-]
D pAMV3p0398 FAD dependent oxidoreductase K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-]
D pAMV3p0582 xsc3; Sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D pAMV3p0399 xsc1; Sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D pAMV3p0520 ptb; Phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D pAMV3p0580 ptaS; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D pAMV3p0401 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D pAMV3p0519 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D pAMV3p0588 AMP-dependent synthetase/ligase K26005 sauT; sulfoacetate-CoA ligase [EC:6.2.1.-]
D pAMV3p0587 sauS; Succinate-semialdehyde dehydrogenase K15515 sauS; sulfoacetaldehyde dehydrogenase [EC:1.2.1.81]
C 00440 Phosphonate and phosphinate metabolism [PATH:pamn00440]
D JCM7685_1174 phnM; phosphonate metabolism protein phnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D JCM7685_0957 beta-lactamase domain-containing protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:pamn00450]
D pAMV3p0116 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JCM7685_2371 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JCM7685_0527 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JCM7685_1720 5-methyltetrahydrofolate-homocysteinemethyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JCM7685_2081 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D pAMV3p0233 methyltetrahydrofolate:corrinoidmethyltransfera se K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D pAMV3p0607 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D JCM7685_1702 sufS; cysteine desulfurase/selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D JCM7685_0897 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D pAMV3p0092 cysN; Sulfate adenylyltransferase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D pAMV3p0093 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JCM7685_0898 adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JCM7685_2960 selD; Selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D JCM7685_0224 selA; Selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D JCM7685_2577 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pamn00460]
D pAMV3p0491 Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JCM7685_0539 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D pAMV3p0065 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D pAMV1p0128 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JCM7685_1189 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pamn00470]
D JCM7685_1588 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JCM7685_2684 D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D JCM7685_1119 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JCM7685_2474 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JCM7685_1698 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JCM7685_2517 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JCM7685_2790 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JCM7685_0792 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JCM7685_1757 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D pAMV1p0046 araE; putative alpha-ketoglutaric semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D JCM7685_2677 dadA; D-amino acid dehydrogenase, small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:pamn00480]
D JCM7685_0539 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JCM7685_1772 cation transport protein ChaC K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D pAMV3p0117 ChaC family protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D pAMV3p0045 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D pAMV3p0496 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D JCM7685_1077 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D JCM7685_1712 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D JCM7685_2944 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JCM7685_2286 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JCM7685_1849 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JCM7685_1340 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_2170 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_2190 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_3007 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D pAMV3p0271 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_1052 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_2363 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_2777 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_2380 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D pAMV3p0418 glutathione S-transferase I, partial K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_0638 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_0639 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_0676 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_1564 glutathione reductase (NADPH) K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D JCM7685_2475 icd; isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JCM7685_2102 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JCM7685_0633 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D JCM7685_0629 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:pamn00540]
D JCM7685_2122 lpxA; Acyl-(acyl carrier protein) K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D JCM7685_1123 lpxC; UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D JCM7685_1636 lpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D JCM7685_2121 lipid-A-disaccharide synthase K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D JCM7685_2120 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D JCM7685_2582 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D JCM7685_0300 Arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D JCM7685_1629 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D JCM7685_0667 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D JCM7685_2581 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D JCM7685_0400 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D JCM7685_1804 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pamn00541]
D JCM7685_0668 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JCM7685_0763 UDP-glucuronate 5'-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JCM7685_2727 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JCM7685_0669 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JCM7685_0375 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D pAMV3p0541 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D JCM7685_0173 ugd1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JCM7685_2345 ugd3; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JCM7685_2346 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D JCM7685_2606 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JCM7685_2608 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JCM7685_2609 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JCM7685_2607 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D JCM7685_1751 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D JCM7685_1838 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D JCM7685_2614 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JCM7685_1749 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D JCM7685_1750 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D JCM7685_2485 glmU; N-acetylglucosamine-1-phosphateuridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:pamn00550]
D JCM7685_2111 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JCM7685_1118 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JCM7685_1113 murC; UDP-N-acetylmuramate-L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JCM7685_2517 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JCM7685_2520 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JCM7685_1119 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JCM7685_2519 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JCM7685_1612 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JCM7685_0704 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JCM7685_2518 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JCM7685_1112 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JCM7685_0677 mtgA; peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D JCM7685_1358 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JCM7685_0514 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D JCM7685_1835 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JCM7685_2521 cell division protein FtsI (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JCM7685_0961 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JCM7685_1668 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:pamn00552]
D JCM7685_0704 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JCM7685_1531 glycosyl transferase family protein K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pamn00543]
D JCM7685_1034 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JCM7685_1754 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JCM7685_1530 hypothetical protein K13665 gumL; pyruvyltransferase
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pamn00730]
D JCM7685_0174 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D JCM7685_1709 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JCM7685_0175 thiO; glycine oxidase, thiamine biosynthesis protein ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D JCM7685_0644 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D JCM7685_2785 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JCM7685_0177 thiG; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D JCM7685_0178 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D JCM7685_1597 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D pAMV3p0052 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JCM7685_2499 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D JCM7685_2701 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JCM7685_0181 TenA family transcription regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:pamn00740]
D JCM7685_2838 ribA; GTP cyclohydrolase-II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D JCM7685_1521 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JCM7685_1516 ribD; diaminohydroxyphosphoribosylaminopyrimidinedeam inase/5-amino-6-(5-phosphoribosylamino)uracilreductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JCM7685_1197 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D JCM7685_1522 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D JCM7685_1520 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D JCM7685_1557 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D pAMV3p0486 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D JCM7685_0443 bluB; cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D pAMV3p0230 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D pAMV3p0137 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pamn00750]
D JCM7685_2329 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D JCM7685_1156 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D JCM7685_2669 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JCM7685_2291 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D JCM7685_2764 pdxJ; pyridoxal phosphate biosynthesis protein K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D JCM7685_1280 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pamn00760]
D JCM7685_1164 nadB; L-aspartate oxidase, NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D JCM7685_1163 nadA; quinolinate synthetase, NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D JCM7685_1165 nadC; nicotinate-nucleotide pyrophosphorylase, NadC K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D JCM7685_2629 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D JCM7685_0752 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JCM7685_1037 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JCM7685_2969 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JCM7685_1669 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D JCM7685_1785 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JCM7685_2627 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D JCM7685_1560 competence/damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D JCM7685_2630 pncA; nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D JCM7685_1175 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D JCM7685_1190 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D JCM7685_1845 pntA; NAD(P) transhydrogenase, subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D JCM7685_1844 pntB; NAD(P) transhydrogenase, subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D pAMV3p0612 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D JCM7685_0496 gabD; succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:pamn00770]
D JCM7685_0510 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JCM7685_0939 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JCM7685_0938 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JCM7685_1328 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D pAMV3p0021 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D pAMV3p0311 panB; 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D pAMV3p0310 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JCM7685_0876 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D JCM7685_1710 phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D JCM7685_1785 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JCM7685_1133 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D JCM7685_0380 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D JCM7685_2765 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D JCM7685_0307 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:pamn00780]
D pAMV3p0009 bioC; biotin synthesis protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D JCM7685_1930 fabB3; 3-oxoacyl-(acyl-carrier-protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D JCM7685_1014 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JCM7685_1323 fabG1; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JCM7685_2813 fabG3; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D pAMV3p0122 NAD dependent epimerase/dehydratase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JCM7685_2123 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JCM7685_2330 fabI3; enoyl-(acyl-carrier protein) reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D JCM7685_1931 fabI1; enoyl-(acyl-carrier protein) reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D pAMV3p0008 hypothetical protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D pAMV3p0005 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D pAMV3p0007 bioA; adenosylmethionine-8-amino-7-oxononanoateaminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D pAMV3p0006 bioD; dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D pAMV3p0004 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D JCM7685_0875 birA; biotin-acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pamn00785]
D JCM7685_2082 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D JCM7685_1310 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D pAMV3p0452 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2492 lpd1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2556 lpd3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2137 acoA; pyruvate dehydrogenase E1 component, subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JCM7685_2138 acoB; pyruvate dehydrogenase E1 component, subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JCM7685_2139 aceF; pyruvate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JCM7685_2551 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D JCM7685_2552 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D pAMV3p0449 odbA; 3-methyl-2-oxobutanoate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D pAMV3p0450 odbB; 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D pAMV3p0451 odb2; 2-oxoisovalerate dehydrogenase E2 component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JCM7685_2810 gcvP; Glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D pAMV1p0113 tmd; trimethylamine-N-oxide demethylase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D pAMV1p0115 dmmD; putative dimethylamine monooxygenase subunit D K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D pAMV3p0189 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JCM7685_2812 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JCM7685_2811 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pamn00790]
D JCM7685_1980 GTP cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D pAMV3p0052 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JCM7685_2566 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D JCM7685_1799 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D JCM7685_2565 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D JCM7685_0827 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D JCM7685_2838 ribA; GTP cyclohydrolase-II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D JCM7685_1521 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JCM7685_1160 aminodeoxychorismate synthase K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D JCM7685_1161 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D JCM7685_0830 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D pAMV3p0533 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D JCM7685_0849 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JCM7685_0964 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JCM7685_0649 molybdopterin converting factor, subunit 1 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D JCM7685_0716 molybdenum biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D JCM7685_0963 molybdopterin biosynthesis protein, MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JCM7685_0184 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:pamn00670]
D JCM7685_1670 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D pAMV3p0609 fthS; Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D pAMV1p0124 folD; 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D pAMV3p0472 folD; Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JCM7685_0294 folD; Bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D pAMV3p0610 folD1; Methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D pAMV1p0128 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JCM7685_1189 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JCM7685_1482 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JCM7685_2954 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JCM7685_0520 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D pAMV1p0113 tmd; trimethylamine-N-oxide demethylase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D pAMV1p0115 dmmD; putative dimethylamine monooxygenase subunit D K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D pAMV3p0189 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JCM7685_2812 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JCM7685_1720 5-methyltetrahydrofolate-homocysteinemethyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JCM7685_2081 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D pAMV3p0233 methyltetrahydrofolate:corrinoidmethyltransfera se K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JCM7685_1957 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D pAMV1p0125 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D JCM7685_0295 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D JCM7685_0627 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D pAMV3p0234 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D JCM7685_1301 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pamn00860]
D JCM7685_1352 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D JCM7685_1509 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JCM7685_2303 gltX3; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JCM7685_1924 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JCM7685_2180 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D JCM7685_0816 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D JCM7685_2181 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D JCM7685_2018 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D JCM7685_2034 oxygen-independent coproporphyrinogen-III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D JCM7685_0215 putative membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D JCM7685_0327 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D JCM7685_0414 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D pAMV3p0222 nirE; Uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D pAMV3p0218 nirG; nitrite reductase heme biosynthesis subunit G K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D pAMV3p0217 nirH; nitrite reductase heme biosynthesis H protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D pAMV3p0219 nirD; nitrite reductase heme biosynthesis D protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D pAMV3p0215 nirN; nitrite reductase N K24867 nirN; dihydro-heme d1 dehydrogenase
D JCM7685_1275 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JCM7685_1599 ctaA; heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D JCM7685_0436 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D JCM7685_0435 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D JCM7685_0431 cobM; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D JCM7685_0432 precorrin methylase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D JCM7685_0429 cobF; precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D JCM7685_0434 cobK; precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D JCM7685_0433 cobL; precorrin-6Y C(5,15)-methyltransferase (decarboxylating) K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D JCM7685_0430 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D JCM7685_0438 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D JCM7685_0918 cobS; cobaltochelatase, subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D JCM7685_0917 cobT1; cobaltochelatase, subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D JCM7685_0422 ATP-cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JCM7685_0441 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JCM7685_1506 cobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D JCM7685_2179 cobD; adenosylcobinamide-phosphate synthase CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D JCM7685_0908 L-threonine-O-3-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D JCM7685_1662 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D JCM7685_1660 cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D JCM7685_1661 cobT3; nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D JCM7685_2178 phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D JCM7685_1664 pyridoxamine 5'-phosphate domain-containing protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D JCM7685_2487 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pamn00130]
D JCM7685_0502 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D pAMV3p0229 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D pAMV3p0230 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D pAMV3p0137 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D JCM7685_0321 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D JCM7685_2911 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D JCM7685_1732 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D JCM7685_1093 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D JCM7685_2845 menF; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D JCM7685_0950 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pamn00900]
D JCM7685_2785 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JCM7685_1614 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D JCM7685_1562 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D JCM7685_2763 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D JCM7685_1354 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D JCM7685_2189 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D JCM7685_2904 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_1051 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0029 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_2399 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0648 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_0786 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0230 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D pAMV3p0137 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D JCM7685_2786 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D JCM7685_0781 farnesyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D JCM7685_1612 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:pamn00906]
D JCM7685_1857 putative phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:pamn00907]
D JCM7685_1049 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JCM7685_2169 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D JCM7685_1802 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pamn00523]
D JCM7685_2606 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JCM7685_2608 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JCM7685_2609 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JCM7685_2607 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:pamn01053]
D JCM7685_2845 menF; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D JCM7685_2846 entB; Isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D JCM7685_2847 entC; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D JCM7685_2849 entE; enterobactin synthase subunit F K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D JCM7685_2850 entF3; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D JCM7685_0408 entF1; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D JCM7685_0553 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D JCM7685_2608 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pamn00946]
D pAMV3p0491 Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D JCM7685_1619 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:pamn00332]
D JCM7685_1851 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JCM7685_1102 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pamn00261]
D pAMV3p0092 cysN; Sulfate adenylyltransferase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D pAMV3p0093 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JCM7685_0898 adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JCM7685_2321 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JCM7685_3013 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D pAMV3p0577 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JCM7685_0567 dapA1; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JCM7685_0344 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JCM7685_2455 dapA3; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JCM7685_0366 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pamn00521]
D JCM7685_2922 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D JCM7685_1172 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JCM7685_2930 cysQ; 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JCM7685_0570 suhB; inositol-1(or 4)-monophosphatas K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JCM7685_2606 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JCM7685_2608 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JCM7685_2609 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JCM7685_2607 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D JCM7685_2922 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:pamn00525]
D JCM7685_2606 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JCM7685_2608 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pamn00401]
D JCM7685_1774 prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D JCM7685_1953 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0506 tyrB; Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0531 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JCM7685_1775 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D JCM7685_0972 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JCM7685_0968 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D JCM7685_1322 fabD; malonyl-CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JCM7685_1323 fabG1; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JCM7685_2813 fabG3; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D pAMV3p0122 NAD dependent epimerase/dehydratase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JCM7685_2330 fabI3; enoyl-(acyl-carrier protein) reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D JCM7685_1931 fabI1; enoyl-(acyl-carrier protein) reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D JCM7685_1324 acyl carrier protein K02078 acpP; acyl carrier protein
D JCM7685_1637 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pamn00999]
D JCM7685_2067 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JCM7685_0379 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D pAMV3p0491 Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pamn00362]
D JCM7685_1654 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D pAMV3p0384 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D JCM7685_2842 glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D JCM7685_2457 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D pAMV3p0381 pcaG; Protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D pAMV3p0382 pcaH; Protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D pAMV3p0377 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D JCM7685_0869 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D pAMV3p0383 dc4C; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D JCM7685_2362 hypothetical protein K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D JCM7685_1049 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D pAMV3p0075 gcdh; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D pAMV3p0623 3-hydroxybutyryl-CoA dehydrogenase, partial K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JCM7685_0419 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JCM7685_2904 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_1051 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0029 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_2399 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0648 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_0786 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D pAMV3p0230 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D pAMV3p0137 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:pamn00364]
D JCM7685_1654 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
C 00625 Chloroalkane and chloroalkene degradation [PATH:pamn00625]
D pAMV3p0282 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JCM7685_0201 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JCM7685_2131 aldehyde dehydrogenase (NAD+) K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_2993 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JCM7685_1058 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D JCM7685_0172 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pamn00361]
D JCM7685_1654 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D JCM7685_2842 glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D JCM7685_0172 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
D JCM7685_1654 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
C 00622 Xylene degradation [PATH:pamn00622]
D JCM7685_2842 glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D JCM7685_2457 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:pamn00643]
D JCM7685_2393 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D JCM7685_2391 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D JCM7685_2392 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D JCM7685_2842 glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:pamn00930]
D JCM7685_2586 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D JCM7685_2099 alkane 1-hydroxylase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D JCM7685_1049 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D JCM7685_2457 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00626 Naphthalene degradation [PATH:pamn00626]
D pAMV3p0282 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JCM7685_0201 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D pAMV3p0381 pcaG; Protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D pAMV3p0382 pcaH; Protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pamn03020]
D JCM7685_0600 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JCM7685_0601 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JCM7685_2698 rpoA; DNA-directed RNA polymerase, subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JCM7685_1798 rpoZ; DNA-directed RNA polymerase, subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pamn03010]
D JCM7685_1997 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JCM7685_2002 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JCM7685_2719 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JCM7685_1291 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JCM7685_2707 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JCM7685_2298 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JCM7685_0606 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JCM7685_2710 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JCM7685_2465 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JCM7685_2726 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JCM7685_2699 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JCM7685_0605 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JCM7685_2700 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JCM7685_2711 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JCM7685_2998 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JCM7685_2149 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JCM7685_2715 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JCM7685_2299 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JCM7685_2721 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JCM7685_1090 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JCM7685_0491 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JCM7685_0597 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JCM7685_2722 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JCM7685_2725 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JCM7685_2724 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JCM7685_2712 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JCM7685_2709 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JCM7685_0599 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JCM7685_2300 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JCM7685_0598 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JCM7685_0596 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JCM7685_2466 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JCM7685_2714 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JCM7685_2703 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JCM7685_2718 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JCM7685_2697 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JCM7685_2708 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JCM7685_2146 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JCM7685_0477 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JCM7685_1890 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JCM7685_2720 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JCM7685_2723 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JCM7685_2713 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JCM7685_1875 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D JCM7685_1889 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JCM7685_0746 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JCM7685_2716 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JCM7685_2706 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JCM7685_2145 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JCM7685_2041 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JCM7685_1977 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JCM7685_2315 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JCM7685_0476 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JCM7685_0167 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JCM7685_0155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JCM7685_2464 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D pAMV3p0647 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JCM7685_0152 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JCM7685_2461 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D pAMV3p0644 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JCM7685_0151 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JCM7685_2460 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D pAMV3p0643 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pamn00970]
D JCM7685_2462 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D pAMV3p0645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JCM7685_0973 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JCM7685_0153 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JCM7685_2809 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JCM7685_1701 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JCM7685_0837 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JCM7685_2206 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JCM7685_3048 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JCM7685_2318 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JCM7685_1319 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JCM7685_1227 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JCM7685_1226 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JCM7685_2855 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JCM7685_1627 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JCM7685_2072 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JCM7685_2853 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JCM7685_2571 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JCM7685_2155 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JCM7685_1528 tRNA-His K14226 tRNA-His; tRNA His
D JCM7685_2463 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D pAMV3p0646 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JCM7685_0154 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JCM7685_1894 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JCM7685_2080 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JCM7685_1152 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JCM7685_0707 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JCM7685_2791 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JCM7685_0150 tRNA-Met K14230 tRNA-Met; tRNA Met
D JCM7685_0681 tRNA-Met K14230 tRNA-Met; tRNA Met
D JCM7685_2459 tRNA-Met K14230 tRNA-Met; tRNA Met
D pAMV3p0642 tRNA-Met K14230 tRNA-Met; tRNA Met
D JCM7685_2278 tRNA-Met K14230 tRNA-Met; tRNA Met
D JCM7685_1532 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JCM7685_0612 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JCM7685_2048 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JCM7685_2326 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JCM7685_0230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JCM7685_1678 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JCM7685_2263 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JCM7685_1425 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JCM7685_2113 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JCM7685_2000 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JCM7685_0819 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JCM7685_0592 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JCM7685_1906 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JCM7685_0166 tRNA-Val K14237 tRNA-Val; tRNA Val
D JCM7685_1457 tRNA-Val K14237 tRNA-Val; tRNA Val
D JCM7685_1621 tRNA-Val K14237 tRNA-Val; tRNA Val
D JCM7685_0226 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D JCM7685_1509 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JCM7685_2303 gltX3; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JCM7685_2530 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JCM7685_2912 amiE; amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JCM7685_2075 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JCM7685_2531 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JCM7685_2506 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JCM7685_0925 aspS; aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JCM7685_2574 glyQ; glycyl-tRNA synthetase, subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JCM7685_2576 glyS; glycyl-tRNA synthetase, subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JCM7685_2269 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JCM7685_0742 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JCM7685_0224 selA; Selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D JCM7685_1859 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JCM7685_2577 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JCM7685_0520 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JCM7685_0640 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JCM7685_3003 leuS; Leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JCM7685_2196 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JCM7685_1666 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D JCM7685_2064 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JCM7685_1748 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JCM7685_1206 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JCM7685_0480 pheS; phenylalanine-tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JCM7685_0485 pheT; phenylalanine-tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JCM7685_1223 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JCM7685_1719 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pamn03060]
D JCM7685_2702 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JCM7685_0594 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JCM7685_1505 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JCM7685_1783 secD; preprotein translocase, subunit SecD K03072 secD; preprotein translocase subunit SecD
D JCM7685_1782 secF; preprotein translocase, subunit SecF K03074 secF; preprotein translocase subunit SecF
D JCM7685_1784 preprotein translocase K03210 yajC; preprotein translocase subunit YajC
D JCM7685_2310 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JCM7685_0310 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JCM7685_0352 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D JCM7685_2152 ffh; signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JCM7685_1210 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JCM7685_2282 twin-arginine translocation protein, TatA subunit K03116 tatA; sec-independent protein translocase protein TatA
D JCM7685_2281 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D JCM7685_2280 tatC; Sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC
D JCM7685_2766 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JCM7685_2953 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pamn04122]
D JCM7685_1709 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JCM7685_0507 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JCM7685_0412 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D JCM7685_1885 tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JCM7685_0649 molybdopterin converting factor, subunit 1 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D JCM7685_0849 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JCM7685_0650 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K03636 moaD; sulfur-carrier protein
D JCM7685_2092 molybdopterin biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D JCM7685_0964 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JCM7685_0716 molybdenum biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D JCM7685_0176 thiS; sulfur carrier, thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:pamn03018]
D JCM7685_0458 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D JCM7685_2470 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D JCM7685_1856 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JCM7685_2996 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JCM7685_2009 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D JCM7685_1068 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D pAMV3p0061 deaD; DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JCM7685_2895 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JCM7685_0214 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JCM7685_0877 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JCM7685_0664 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JCM7685_1548 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JCM7685_1006 RNA chaperone Hfq K03666 hfq; host factor-I protein
D JCM7685_1745 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D JCM7685_1339 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D JCM7685_1105 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D JCM7685_1501 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D JCM7685_0396 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pamn03030]
D JCM7685_1409 DNA polymerase III, subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JCM7685_0381 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D pAMV1p0084 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JCM7685_1326 dnaE3; DNA polymerase III, subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JCM7685_1543 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JCM7685_0959 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JCM7685_3005 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JCM7685_2285 DNA polymerase III, subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D JCM7685_1088 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JCM7685_1140 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JCM7685_1870 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JCM7685_1927 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JCM7685_2191 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JCM7685_2588 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JCM7685_2035 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JCM7685_1882 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pamn03410]
D JCM7685_1047 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JCM7685_0966 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JCM7685_2585 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JCM7685_1092 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JCM7685_1728 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JCM7685_0788 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D pAMV1p0140 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JCM7685_0615 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JCM7685_1200 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JCM7685_2836 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JCM7685_2035 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JCM7685_2071 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JCM7685_1882 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pamn03420]
D JCM7685_1922 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JCM7685_0851 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D JCM7685_1739 uvrB; excinuclease ABC, subunit B K03702 uvrB; excinuclease ABC subunit B
D JCM7685_0654 excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D JCM7685_1978 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JCM7685_2035 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JCM7685_1882 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pamn03430]
D JCM7685_2654 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JCM7685_2949 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D JCM7685_1978 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JCM7685_1828 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JCM7685_2787 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JCM7685_2071 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JCM7685_1927 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JCM7685_1326 dnaE3; DNA polymerase III, subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JCM7685_1088 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JCM7685_1543 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JCM7685_3005 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JCM7685_0959 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JCM7685_1409 DNA polymerase III, subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JCM7685_0381 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D pAMV1p0084 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JCM7685_2285 DNA polymerase III, subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D JCM7685_1882 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:pamn03440]
D JCM7685_2071 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JCM7685_1927 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JCM7685_1087 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JCM7685_1085 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JCM7685_1541 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JCM7685_2507 recA; recombinase A K03553 recA; recombination protein RecA
D JCM7685_2035 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JCM7685_0557 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JCM7685_0555 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JCM7685_0558 ruvC; Holliday junction resolvase RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JCM7685_1881 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JCM7685_1326 dnaE3; DNA polymerase III, subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JCM7685_1088 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JCM7685_1543 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JCM7685_3005 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JCM7685_0959 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JCM7685_1409 DNA polymerase III, subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JCM7685_0381 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D pAMV1p0084 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JCM7685_2285 DNA polymerase III, subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D JCM7685_0471 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:pamn03450]
D pAMV3p0514 DNA repair protein K10979 ku; DNA end-binding protein Ku
D pAMV3p0280 DNA repair protein K10979 ku; DNA end-binding protein Ku
D pAMV3p0281 ykoU2; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pamn02010]
D JCM7685_2209 cysP3; sulfate ABC transporter, periplasmic protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D JCM7685_1257 cysP1; sulfate ABC transporter, periplasmic component K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D JCM7685_2210 cysU; sulfate ABC transporter, permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D JCM7685_1258 cysT; sulfate ABC transporter, permease component K02046 cysU; sulfate/thiosulfate transport system permease protein
D JCM7685_2211 cysW3; sulfate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D JCM7685_1259 cysW1; sulfate ABC transporter, permease component K02047 cysW; sulfate/thiosulfate transport system permease protein
D JCM7685_2208 cysA3; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D JCM7685_1260 cysA1; sulfate/molybdate ABC transporter, ATPase component K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D pAMV3p0125 tauA; taurine ABC transporter, periplasmic taurine-binding protein K15551 tauA; taurine transport system substrate-binding protein
D pAMV3p0127 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein
D pAMV3p0126 tauB; Taurine import ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D pAMV3p0487 ssuA; aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D JCM7685_1974 tauA1; nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D pAMV3p0488 ssuC; aliphatic sulfonates transport permease protein ssuC K15554 ssuC; sulfonate transport system permease protein
D JCM7685_1972 tauC1; nitrate/sulfonate/bicarbonate ABC transporter, permease K15554 ssuC; sulfonate transport system permease protein
D pAMV3p0489 ssuB; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D JCM7685_1973 tauB1; nitrate/sulfonate/bicarbonate ABC transporter, ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D JCM7685_0180 ABC transporter ATP-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D JCM7685_0183 putative ABC transporter permease protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D JCM7685_0182 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D JCM7685_2906 modA; Molybdate-binding periplasmic protein K02020 modA; molybdate transport system substrate-binding protein
D JCM7685_2907 modB; Molybdenum transport system permease protein modB K02018 modB; molybdate transport system permease protein
D JCM7685_2908 modC; Molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D pAMV3p0079 iron ABC transporter K02012 afuA; iron(III) transport system substrate-binding protein
D JCM7685_3039 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein
D pAMV3p0180 spermidine/putrescine ABC transporter, periplasmic binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JCM7685_1104 ABC polyamine transporter K11069 potD; spermidine/putrescine transport system substrate-binding protein
D pAMV3p0182 polyamine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D JCM7685_1863 putative spermidine/putrescine transport system, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D pAMV3p0181 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D JCM7685_1864 putative spermidine/putrescine transport system, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D pAMV3p0183 potA3; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D JCM7685_1862 potA3; spermidine/putrescine transport system, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D pAMV3p0464 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D pAMV3p0255 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D pAMV3p0571 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D JCM7685_3017 glycine betaine/proline ABC transporter, periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D JCM7685_0680 ABC-type proline/glycine betaine transport systems, periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D JCM7685_1238 glycine betaine transport system, periplasmic protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D pAMV1p0094 glycine betaine/L-proline ABC transport system substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D pAMV3p0568 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D pAMV3p0569 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D JCM7685_3015 glycine betaine/proline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D JCM7685_0330 ABC transporter permease, partial K02001 proW; glycine betaine/proline transport system permease protein
D JCM7685_1237 glycine betaine transport system, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D pAMV1p0095 glycine betaine/L-proline ABC transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D pAMV3p0570 opuAA; Glycine betaine transport ATP-binding protein OpuAA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D JCM7685_3016 glycine betaine/proline ABC transporter, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D JCM7685_1236 glycine betaine/proline transport system, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D pAMV1p0096 glycine betaine/L-proline ABC transport system ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D pAMV3p0602 osmF; ABC transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D pAMV3p0603 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D pAMV3p0605 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D pAMV3p0604 yehX; osmoprotectant uptake system ATP-binding protein YehX K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D pAMV3p0529 ugpC; glycerol-3-phosphate ABC transporter ATPase K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D pAMV3p0532 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D pAMV3p0531 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D pAMV3p0530 mannitol ABC transporter permease K10229 smoG; polyol transport system permease protein
D JCM7685_2983 xylF; ABC-type xylose transport system, periplasmic component K10546 chvE; putative multiple sugar transport system substrate-binding protein
D JCM7685_2985 xylH; ABC-type xylose transport system, permease component K10547 gguB; putative multiple sugar transport system permease protein
D JCM7685_2984 xylG; D-xylose ABC transporter, ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JCM7685_0774 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D JCM7685_1809 putative toluene transport system protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JCM7685_0623 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JCM7685_1589 ABC-type transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JCM7685_0625 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JCM7685_1590 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D JCM7685_0624 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D JCM7685_0756 membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D JCM7685_0754 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JCM7685_0753 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JCM7685_0755 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D pAMV3p0558 ABC ribose transporter K10439 rbsB; ribose transport system substrate-binding protein
D pAMV3p0559 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D pAMV3p0560 rbsA; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D JCM7685_0720 sugar ABC transporter, periplasmic component K10552 frcB; fructose transport system substrate-binding protein
D JCM7685_0719 ABC transporter permease K10553 frcC; fructose transport system permease protein
D JCM7685_0718 sugar ABC transporter ATP-binding protein K10554 frcA; fructose transport system ATP-binding protein
D pAMV3p0101 ABC sugar (glycerol) transporter, periplasmic binding protein K17321 glpV; glycerol transport system substrate-binding protein
D pAMV3p0098 Glycerol-3-phosphate ABC transporter K17322 glpP; glycerol transport system permease protein
D pAMV3p0099 carbohydrate ABC transporter membrane protein 2, CUT1 family K17323 glpQ; glycerol transport system permease protein
D pAMV3p0096 ABC transporter K17324 glpS; glycerol transport system ATP-binding protein
D pAMV3p0097 Glycerol-3-phosphate-transporting ATPase K17325 glpT; glycerol transport system ATP-binding protein
D JCM7685_1265 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D JCM7685_1266 pstC; phosphate ABC transporter, permease component PstC K02037 pstC; phosphate transport system permease protein
D JCM7685_1267 pstA; phosphate ABC transporter, permease component PstA K02038 pstA; phosphate transport system permease protein
D JCM7685_1268 pstB; phosphate ABC transporter, ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D pAMV3p0351 glnH; Glutamine-binding periplasmic protein GlnH K10036 glnH; glutamine transport system substrate-binding protein
D pAMV3p0350 glnP; Glutamine transport system permease protein glnP K10037 glnP; glutamine transport system permease protein
D pAMV3p0349 glnQ; Glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D JCM7685_2370 general L-amino acid transport system, substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D JCM7685_2689 glutamate/glutamine/aspartate/asparagine-bindingprotein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D JCM7685_2369 general L-amino acid transport system permease K09970 aapQ; general L-amino acid transport system permease protein
D JCM7685_2688 glutamate/glutamine/aspartate/asparagine transport system, permease protein K09970 aapQ; general L-amino acid transport system permease protein
D JCM7685_2368 general L-amino acid transport system permease K09971 aapM; general L-amino acid transport system permease protein
D JCM7685_2687 glutamate/glutamine/aspartate/asparagine transport system, permease protein K09971 aapM; general L-amino acid transport system permease protein
D JCM7685_2367 general L-amino acid transport system, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D JCM7685_2686 general L-amino acid transport system, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D pAMV3p0332 argT; Lysine-arginine-ornithine-binding periplasmic protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D pAMV3p0334 hisM; Histidine ABC transporter, permease protein HisM K10023 aotM; arginine/ornithine transport system permease protein
D pAMV3p0333 hisQ; Histidine transport system permease protein hisQ K10024 aotQ; arginine/ornithine transport system permease protein
D pAMV3p0331 occP; Octopine permease ATP-binding protein P K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D pAMV3p0197 ABC transporter, periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JCM7685_3025 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JCM7685_1488 branched-chain amino acid transport system, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D pAMV3p0434 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein
D pAMV3p0208 amino acid ABC substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D pAMV1p0111 ABC transporter, periplasmic substrate-binding protein, putative K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JCM7685_3029 amino acid ABC-type transport system, permease components K01997 livH; branched-chain amino acid transport system permease protein
D JCM7685_1484 branched-chain amino acid transport system permease K01997 livH; branched-chain amino acid transport system permease protein
D pAMV3p0437 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JCM7685_1483 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D JCM7685_3028 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein
D pAMV3p0438 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JCM7685_3027 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JCM7685_1487 branched-chain amino acid transport system, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D pAMV3p0435 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JCM7685_1486 branched-chain amino acid transport system, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JCM7685_3026 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D pAMV3p0436 histidinol dehydrogenase, ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JCM7685_1286 metQ; DL-methionine transporter, substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein
D JCM7685_1287 metI; DL-methionine transporter, permease subunit K02072 metI; D-methionine transport system permease protein
D JCM7685_1288 metN; DL-methionine transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JCM7685_1663 peptide/nickel transport system, substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D pAMV3p0300 dppA; Periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D pAMV3p0301 dppB; Dipeptide transport system permease protein dppB K12369 dppB; dipeptide transport system permease protein
D pAMV3p0302 dppC; Dipeptide transport system permease protein dppC K12370 dppC; dipeptide transport system permease protein
D pAMV3p0303 dppD; Dipeptide transport ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D pAMV3p0304 dppF; Dipeptide transport ATP-binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein
D JCM7685_2221 peptide/nickel transport system, substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D JCM7685_2220 peptide/nickel transport system, permease protein K13894 yejB; microcin C transport system permease protein
D JCM7685_2219 peptide/nickel transport system, permease protein K13895 yejE; microcin C transport system permease protein
D JCM7685_2218 peptide/nickel transport system, ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D JCM7685_0990 znuA; zinc ABC transporter periplasmic zinc-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D JCM7685_1294 yrpE; hypothetical protein K09815 znuA; zinc transport system substrate-binding protein
D JCM7685_2738 zinc transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D JCM7685_0993 znuB; zinc ABC transporter, permease protein ZnuB K09816 znuB; zinc transport system permease protein
D JCM7685_2736 zinc transport system, permease protein K09816 znuB; zinc transport system permease protein
D JCM7685_0992 znuC; zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D JCM7685_2737 zinc transport system, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D pAMV3p0256 yfeA; periplasmic metal ion-binding lipoprotein K11604 sitA; manganese/iron transport system substrate-binding protein
D pAMV3p0258 yfeC; Chelated iron transport system membrane protein yfeC K11605 sitC; manganese/iron transport system permease protein
D pAMV3p0259 yfeD; Chelated iron transport system membrane protein yfeD K11606 sitD; manganese/iron transport system permease protein
D pAMV3p0257 yfeB; Chelated iron transport system membrane protein YfeB K11607 sitB; manganese/iron transport system ATP-binding protein
D pAMV3p0027 bioY; biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component
D pAMV3p0026 cbiQ; ABC transporter permease K16783 bioN; biotin transport system permease protein
D pAMV3p0025 cbiO; cobalt ABC transporter K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D JCM7685_2354 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D JCM7685_1630 capsule polysaccharide export inner-membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D JCM7685_2612 capsule polysaccharide export protein K10107 kpsE; capsular polysaccharide transport system permease protein
D JCM7685_2611 sugar ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D JCM7685_1631 capsular polysaccharide transport system, ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D JCM7685_2613 capsular polysaccharide transport system ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D JCM7685_1332 LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D JCM7685_1333 lolD; lipoprotein-releasing system, ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D JCM7685_1778 ccmC; heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D JCM7685_1779 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D JCM7685_1780 ccmA; heme exporter protein CcmA, ATPase K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D JCM7685_2287 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D JCM7685_2288 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D JCM7685_0303 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D pAMV1p0032 nosY; membrane protein NosY K19341 nosY; Cu-processing system permease protein
D pAMV1p0033 nosF; copper transport ATP-binding protein NosF K19340 nosF; Cu-processing system ATP-binding protein
D JCM7685_0796 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D JCM7685_0795 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JCM7685_0582 ABC transporter permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D JCM7685_0591 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D JCM7685_0772 ABC-type protease/lipase transport system, ATPase and permease component K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D pAMV3p0458 macB1; macrolide export ATP-binding/permease macB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D pAMV3p0473 macB3; macrolide ABC transporter ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:pamn02060]
D JCM7685_1074 phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D JCM7685_1073 phosphotransferase system, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D JCM7685_2322 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D JCM7685_0305 PTS lactose transporter subunit IIC K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D JCM7685_2447 phosphotransferase system mannitol/fructose-specific IIA domain-containing protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:pamn03070]
D JCM7685_2965 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein
D JCM7685_1783 secD; preprotein translocase, subunit SecD K03072 secD; preprotein translocase subunit SecD
D JCM7685_1782 secF; preprotein translocase, subunit SecF K03074 secF; preprotein translocase subunit SecF
D JCM7685_0594 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JCM7685_1505 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JCM7685_2702 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JCM7685_1784 preprotein translocase K03210 yajC; preprotein translocase subunit YajC
D JCM7685_2310 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JCM7685_0310 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JCM7685_1210 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JCM7685_0352 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D JCM7685_2152 ffh; signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JCM7685_2282 twin-arginine translocation protein, TatA subunit K03116 tatA; sec-independent protein translocase protein TatA
D JCM7685_2281 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D JCM7685_2280 tatC; Sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC
D pAMV3p0213 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG
D JCM7685_1449 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D JCM7685_1468 type VI secretion system, Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D pAMV3p0427 type VI secretion system K11904 vgrG; type VI secretion system secreted protein VgrG
D pAMV1p0052 type VI secretion system effector Hcp1 family K11903 hcp; type VI secretion system secreted protein Hcp
D pAMV1p0070 icmL; type VI secretion protein IcmL K11891 impL; type VI secretion system protein ImpL
D pAMV1p0069 impK; type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK
D pAMV1p0056 clpV1-1; type VI secretion system ATPase K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pamn02020]
D JCM7685_1493 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JCM7685_1270 phoB; phosphate regulon transcriptional regulatory protein phoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D pAMV1p0083 two component response regulator receiver protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D pAMV3p0052 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JCM7685_1265 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D JCM7685_1321 two-component system, OmpR family, osmolarity sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D JCM7685_0309 chemotaxis protein CheY K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D JCM7685_1304 htrA; protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D pAMV3p0552 flaA; Flagellin protein FlaA K02406 fliC; flagellin
D JCM7685_2884 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D pAMV3p0050 kdpD; histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JCM7685_2449 kdpD; osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D pAMV3p0051 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JCM7685_2448 KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JCM7685_2452 kdpA; potassium-transporting ATPase, subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D JCM7685_2451 kdpB; potassium-transporting ATPase, subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D JCM7685_2450 kdpC; potassium-transporting ATPase, subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D JCM7685_3019 torS; TMAO reductase sytem sensor TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D JCM7685_3018 torR; DNA-binding response regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D pAMV3p0077 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D pAMV3p0078 transcriptional regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D pAMV3p0082 tctA1; tripartite tricarboxylate transporter TctA, truncated K07793 tctA; putative tricarboxylic transport membrane protein
D JCM7685_3050 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D pAMV3p0081 C4-dicarboxylate ABC transporter K07794 tctB; putative tricarboxylic transport membrane protein
D pAMV3p0080 C4-dicarboxylate ABC transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D JCM7685_1599 ctaA; heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D JCM7685_1089 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JCM7685_0056 putative membrane protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D pAMV1p0088 putative ferri-siderophore receptor K19611 fepA; ferric enterobactin receptor
D pAMV3p0107 histidine kinase, NarQ K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D pAMV3p0108 LuxR family transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D pAMV1p0134 putative serine cycle genes transcriptional activator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D pAMV3p0442 narG; nitrate reductase A subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D pAMV3p0443 narH; nitrate reductase A subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D pAMV3p0445 narI; nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D pAMV3p0444 narJ; nitrate reductase subunit delta K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D JCM7685_2159 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D JCM7685_2696 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D pAMV3p0154 spore coat protein u K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D pAMV3p0151 spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D pAMV3p0152 papD; P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein
D pAMV3p0153 papC; P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein
D JCM7685_1716 glnD; PII uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D JCM7685_1150 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D JCM7685_1000 ntrB; two-component system, NtrC family K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D JCM7685_1001 ntrC; two-component system, NtrC family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D JCM7685_1149 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1494 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1794 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1002 nitrY; nitrogen regulation sensor histidine kinase NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D JCM7685_1003 ntrX; nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D JCM7685_2904 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_1051 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0029 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_2399 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0648 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_0786 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV1p0039 dctB; two-component system sensor histidine kinase for C4-dicarboxylate transport K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D JCM7685_2473 two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D pAMV1p0040 dctD; two-component system transcriptional regulator for C4-dicarboxylate transport K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D pAMV3p0059 dctA; C4-dicarboxylate ABC transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D pAMV1p0038 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D JCM7685_2001 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JCM7685_1689 response regulator receiver modulated diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D JCM7685_2511 two-component system, cell cycle sensor histidine kinase and response regulator CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D JCM7685_1100 hypothetical protein K13588 chpT; histidine phosphotransferase ChpT
D JCM7685_1883 chemotaxis protein CheY K13584 ctrA; two-component system, cell cycle response regulator CtrA
D pAMV1p0041 two-component hybrid sensor and regulator K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D JCM7685_0013 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D JCM7685_0901 Crp family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JCM7685_0348 regB; sensor histidine kinase regB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D JCM7685_0349 chemotaxis protein CheY K15012 regA; two-component system, response regulator RegA
D JCM7685_0661 ubiquinol-cytochrome C reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D JCM7685_0660 ubiquinol-cytochrome C reductase, cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D JCM7685_0659 ubiquinol-cytochrome C reductase, cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D JCM7685_2222 cytochrome c-552 K08738 CYC; cytochrome c
D JCM7685_2083 cycA; cytochrome c550 K08738 CYC; cytochrome c
D JCM7685_2031 ccoN; cbb3-type cytochrome c oxidase, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D JCM7685_2030 ccoO; cbb3-type cytochrome c oxidase, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D JCM7685_2029 ccoQ; cbb3-type cytochrome c oxidase, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D JCM7685_2028 ccoP; cbb3-type cytochrome c oxidase, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D pAMV3p0621 cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D pAMV3p0620 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JCM7685_2965 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein
D JCM7685_1518 capsule polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D pAMV3p0478 ECF subfamily RNA polymerase sigma-24 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D pAMV3p0477 sigma factor regulatory protein FecR K07165 fecR; transmembrane sensor
D pAMV3p0202 FecR protein K07165 fecR; transmembrane sensor
D pAMV3p0018 fecR1; anti-FecI sigma factor FecR K07165 fecR; transmembrane sensor
D pAMV3p0373 histidine kinase K07165 fecR; transmembrane sensor
D pAMV3p0158 fecR3; anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D JCM7685_0710 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:pamn04148]
D JCM7685_2578 arginase K01476 rocF; arginase [EC:3.5.3.1]
D pAMV3p0336 arcA; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D JCM7685_0629 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D JCM7685_0661 ubiquinol-cytochrome C reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pamn02024]
D JCM7685_1006 RNA chaperone Hfq K03666 hfq; host factor-I protein
D JCM7685_0972 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JCM7685_0968 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D JCM7685_1489 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D pAMV3p0051 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JCM7685_2448 KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JCM7685_2696 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D JCM7685_2438 conjugal transfer ATPase TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D JCM7685_2439 conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D JCM7685_2441 conjugal transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D JCM7685_2442 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D JCM7685_2443 conjugal transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D JCM7685_2444 conjugal transfer protein Trbl K20533 trbI; type IV secretion system protein TrbI
D JCM7685_2118 polyamine/opine ABC transporter, substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JCM7685_0952 spermidine/putrescine transport system, substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JCM7685_0953 spermidine/putrescine transport system, substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JCM7685_2652 spermidine/putrescine ABC transporter, substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D pAMV3p0169 polyamine ABC transporter, periplasmic polyamine-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JCM7685_0955 spermidine/putrescine transport system, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D JCM7685_2650 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D pAMV3p0171 polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D JCM7685_0954 spermidine/putrescine transport system, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D JCM7685_2651 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D pAMV3p0170 polyamine ABC transporter substrate-binding protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D JCM7685_0951 potA1; spermidine/putrescine import ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D JCM7685_2649 spermidine/putrescine ABC transporter ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D pAMV3p0168 potA1; Spermidine/putrescine import ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D pAMV3p0197 ABC transporter, periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JCM7685_3025 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JCM7685_1488 branched-chain amino acid transport system, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D pAMV3p0434 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein
D pAMV3p0208 amino acid ABC substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D pAMV1p0111 ABC transporter, periplasmic substrate-binding protein, putative K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JCM7685_3029 amino acid ABC-type transport system, permease components K01997 livH; branched-chain amino acid transport system permease protein
D JCM7685_1484 branched-chain amino acid transport system permease K01997 livH; branched-chain amino acid transport system permease protein
D pAMV3p0437 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JCM7685_1483 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D JCM7685_3028 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein
D pAMV3p0438 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JCM7685_3027 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JCM7685_1487 branched-chain amino acid transport system, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D pAMV3p0435 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JCM7685_1486 branched-chain amino acid transport system, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JCM7685_3026 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D pAMV3p0436 histidinol dehydrogenase, ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D pAMV3p0028 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JCM7685_0901 Crp family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JCM7685_0991 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D JCM7685_2838 ribA; GTP cyclohydrolase-II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D JCM7685_1516 ribD; diaminohydroxyphosphoribosylaminopyrimidinedeam inase/5-amino-6-(5-phosphoribosylamino)uracilreductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JCM7685_0168 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JCM7685_1663 peptide/nickel transport system, substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JCM7685_1823 peptide/nickel transport system, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JCM7685_2496 dipeptide ABC transporter periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D pAMV3p0594 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JCM7685_2672 peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D pAMV3p0403 ABC-type dipeptide transport system K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JCM7685_1822 peptide/nickel transport system, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JCM7685_2497 dppB1; dipeptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D pAMV3p0593 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JCM7685_2679 dppB3; peptide/opine/nickel uptake family ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D pAMV3p0404 ABC-type dipeptide transport systems K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JCM7685_1821 peptide/nickel transport system, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JCM7685_2498 dppC1; dipeptide/oligopeptide/nickel ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D pAMV3p0592 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JCM7685_2680 dppC3; peptide/opine/nickel uptake family ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D pAMV3p0405 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JCM7685_1820 peptide/nickel transport system, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JCM7685_2681 peptide/opine/nickel uptake family ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D pAMV3p0406 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D pAMV3p0591 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JCM7685_2495 glutathione ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JCM7685_2310 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JCM7685_0594 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JCM7685_1505 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JCM7685_2702 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JCM7685_1784 preprotein translocase K03210 yajC; preprotein translocase subunit YajC
D JCM7685_0310 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JCM7685_1210 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JCM7685_0352 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D JCM7685_2152 ffh; signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pamn02030]
D pAMV3p0558 ABC ribose transporter K10439 rbsB; ribose transport system substrate-binding protein
D pAMV3p0300 dppA; Periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D JCM7685_2001 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JCM7685_1146 flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D JCM7685_2165 surface presentation of antigens (SPOA) protein K02416 fliM; flagellar motor switch protein FliM
D JCM7685_2890 fliN; Flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D JCM7685_2884 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D JCM7685_2936 motB; Flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JCM7685_1770 flagellar motor protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:pamn02040]
D JCM7685_2598 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D JCM7685_2888 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D JCM7685_1146 flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D JCM7685_2595 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D pAMV3p0550 flagellar hook-length control protein, partial K02414 fliK; flagellar hook-length control protein FliK
D JCM7685_2887 fliL3; flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D JCM7685_2604 fliL1; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D JCM7685_2165 surface presentation of antigens (SPOA) protein K02416 fliM; flagellar motor switch protein FliM
D JCM7685_2890 fliN; Flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D JCM7685_2891 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JCM7685_2599 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JCM7685_2881 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JCM7685_2882 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JCM7685_2880 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JCM7685_2602 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D JCM7685_2596 flgB; flagellar basal-body rod protein, FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JCM7685_2597 flgC; flagellar basal body rod protein, FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D pAMV3p0549 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D JCM7685_2937 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D JCM7685_2600 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D JCM7685_2601 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D JCM7685_2603 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D JCM7685_2940 flgI; Flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D JCM7685_2938 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JCM7685_2939 flgL; flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D pAMV3p0552 flaA; Flagellin protein FlaA K02406 fliC; flagellin
D JCM7685_2884 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D JCM7685_2936 motB; Flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JCM7685_1770 flagellar motor protein K02557 motB; chemotaxis protein MotB
D JCM7685_1869 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D JCM7685_1856 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:pamn04980]
D JCM7685_0422 ATP-cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JCM7685_0744 arginine transporter K07588 MMAA; GTPase [EC:3.6.5.-]
D JCM7685_1577 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D JCM7685_1720 5-methyltetrahydrofolate-homocysteinemethyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JCM7685_2081 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D pAMV3p0233 methyltetrahydrofolate:corrinoidmethyltransfera se K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pamn01501]
D JCM7685_3001 porin family protein K08720 ompU; outer membrane protein OmpU
D JCM7685_2062 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JCM7685_1663 peptide/nickel transport system, substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JCM7685_2157 RND family efflux transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D JCM7685_2958 acrA; RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D pAMV3p0544 acrA; Acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D pAMV1p0022 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JCM7685_2158 mexB; multidrug resistance protein MexB K18138 acrB; multidrug efflux pump
D JCM7685_2959 acrD; putative aminoglycoside efflux pump K18138 acrB; multidrug efflux pump
D pAMV3p0543 acrB; Acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D pAMV1p0023 acrB; RND efflux system, inner membrane transporter K18138 acrB; multidrug efflux pump
D JCM7685_2965 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein
D JCM7685_1358 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JCM7685_1835 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JCM7685_2521 cell division protein FtsI (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pamn01502]
D JCM7685_1119 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JCM7685_1588 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JCM7685_2519 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JCM7685_2518 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JCM7685_1112 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pamn01503]
D JCM7685_2660 serralysin K01406 prtC; serralysin [EC:3.4.24.40]
D JCM7685_2633 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40]
D JCM7685_1357 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JCM7685_1304 htrA; protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D JCM7685_2157 RND family efflux transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D JCM7685_2958 acrA; RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D pAMV3p0544 acrA; Acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D pAMV1p0022 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JCM7685_2158 mexB; multidrug resistance protein MexB K18138 acrB; multidrug efflux pump
D JCM7685_2959 acrD; putative aminoglycoside efflux pump K18138 acrB; multidrug efflux pump
D pAMV3p0543 acrB; Acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D pAMV1p0023 acrB; RND efflux system, inner membrane transporter K18138 acrB; multidrug efflux pump
D JCM7685_2965 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein
D JCM7685_2122 lpxA; Acyl-(acyl carrier protein) K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D JCM7685_0056 putative membrane protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pamn01000]
C 01001 Protein kinases [BR:pamn01001]
D JCM7685_2663 anti-sigma B factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D JCM7685_2637 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D JCM7685_1493 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JCM7685_1321 two-component system, OmpR family, osmolarity sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D pAMV3p0050 kdpD; histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JCM7685_2449 kdpD; osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JCM7685_3019 torS; TMAO reductase sytem sensor TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D pAMV3p0077 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D JCM7685_2340 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JCM7685_2240 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D pAMV3p0107 histidine kinase, NarQ K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D JCM7685_2159 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D JCM7685_1000 ntrB; two-component system, NtrC family K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D JCM7685_1002 nitrY; nitrogen regulation sensor histidine kinase NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D pAMV1p0039 dctB; two-component system sensor histidine kinase for C4-dicarboxylate transport K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D JCM7685_2473 two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D pAMV3p0614 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D JCM7685_2511 two-component system, cell cycle sensor histidine kinase and response regulator CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D pAMV1p0041 two-component hybrid sensor and regulator K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D JCM7685_0348 regB; sensor histidine kinase regB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pamn01009]
D JCM7685_2924 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JCM7685_2670 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pamn01002]
D JCM7685_2953 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JCM7685_1596 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JCM7685_1735 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JCM7685_0701 Glutamate synthase (NADPH/NADH), large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JCM7685_0697 glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JCM7685_2484 glmS; glucosamine-fructose-6-phosphateaminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JCM7685_0332 hchA; heat shock protein HSP31 and glyoxalase 3 K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D JCM7685_0391 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D JCM7685_0800 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D JCM7685_1635 peptidoglycan-binding protein K21470 ycbB; L,D-transpeptidase YcbB
D JCM7685_1849 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JCM7685_2091 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D JCM7685_1342 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D JCM7685_2660 serralysin K01406 prtC; serralysin [EC:3.4.24.40]
D JCM7685_2633 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40]
D JCM7685_2950 peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D JCM7685_2951 peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D JCM7685_2944 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JCM7685_2286 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JCM7685_1743 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D JCM7685_2135 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JCM7685_1080 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JCM7685_0835 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JCM7685_0915 X-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D JCM7685_1600 carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D JCM7685_0552 ftsH; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JCM7685_0556 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D JCM7685_1615 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D JCM7685_2899 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D JCM7685_1304 htrA; protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D JCM7685_0961 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JCM7685_1668 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D JCM7685_1812 clpP3; ATP-dependent Clp protease, proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JCM7685_0200 clpP1; ATP-dependent Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JCM7685_1897 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D JCM7685_0962 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D JCM7685_2766 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JCM7685_0320 Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D JCM7685_0459 ctpA; Carboxy-terminal-processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D JCM7685_1619 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D JCM7685_0646 rhomboid family protein K07059 K07059; rhomboid family protein
D JCM7685_1020 phage head maturation protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D JCM7685_1311 hypothetical protein K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D JCM7685_0359 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D JCM7685_0539 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D pAMV3p0226 peptidase U32 K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D pAMV3p0227 peptidase U32 K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D JCM7685_2929 peptidase U62, modulator of DNA gyrase K03592 pmbA; PmbA protein
D JCM7685_1273 peptidase U62, modulator of DNA gyrase K03568 tldD; TldD protein
D JCM7685_2829 alpha-2-macroglobulin domain-containing protein K06894 yfhM; alpha-2-macroglobulin
D JCM7685_1566 membrane protease subunit HflC K04087 hflC; modulator of FtsH protease HflC
D JCM7685_1565 membrane protease subunit HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:pamn01003]
D JCM7685_1169 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JCM7685_0677 mtgA; peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D JCM7685_0514 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D JCM7685_1358 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JCM7685_1531 glycosyl transferase family protein K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D pAMV3p0634 hypothetical protein K14340 K14340; mannosyltransferase [EC:2.4.1.-]
D JCM7685_1672 membrane glycosyltransferase K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D pAMV3p0118 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pamn01005]
D JCM7685_2122 lpxA; Acyl-(acyl carrier protein) K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D JCM7685_2120 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D JCM7685_1123 lpxC; UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D JCM7685_1636 lpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D JCM7685_2121 lipid-A-disaccharide synthase K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D JCM7685_2582 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D JCM7685_1804 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D JCM7685_2581 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D JCM7685_0400 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D JCM7685_1629 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D JCM7685_0667 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D JCM7685_0300 Arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D JCM7685_3011 glycosyltransferase K12989 lpcC; mannosyltransferase [EC:2.4.1.-]
D JCM7685_0065 bactoprenol glucosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D pAMV3p0635 polyprenyl-phosphate beta-D-glucosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pamn01011]
D JCM7685_2111 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JCM7685_1118 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JCM7685_1113 murC; UDP-N-acetylmuramate-L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JCM7685_2517 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JCM7685_2520 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JCM7685_1119 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JCM7685_1588 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JCM7685_1698 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JCM7685_2518 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JCM7685_1112 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JCM7685_0704 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JCM7685_1717 virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D JCM7685_1358 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JCM7685_0514 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D JCM7685_1835 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JCM7685_2521 cell division protein FtsI (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JCM7685_0961 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JCM7685_1668 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D JCM7685_0677 mtgA; peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D JCM7685_0391 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D JCM7685_0800 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D JCM7685_1635 peptidoglycan-binding protein K21470 ycbB; L,D-transpeptidase YcbB
D JCM7685_2899 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D JCM7685_0568 murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D pAMV3p0316 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D JCM7685_0457 membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D JCM7685_1015 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D JCM7685_1357 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pamn01004]
D JCM7685_1322 fabD; malonyl-CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JCM7685_2043 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JCM7685_1930 fabB3; 3-oxoacyl-(acyl-carrier-protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D JCM7685_1014 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JCM7685_1323 fabG1; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JCM7685_2813 fabG3; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D pAMV3p0122 NAD dependent epimerase/dehydratase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JCM7685_1929 fabA; 3-hydroxydecanoyl-(acyl-carrier-protein)dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D JCM7685_2123 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JCM7685_2330 fabI3; enoyl-(acyl-carrier protein) reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D JCM7685_1931 fabI1; enoyl-(acyl-carrier protein) reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D JCM7685_0747 carboxylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D pAMV3p0524 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JCM7685_0880 acyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D pAMV3p0028 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JCM7685_0808 long-chain-fatty-acid-CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JCM7685_2042 plsX; glycerol-3-phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JCM7685_0418 plsY; Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JCM7685_0797 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pamn01008]
D JCM7685_2846 entB; Isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D JCM7685_2849 entE; enterobactin synthase subunit F K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D JCM7685_2850 entF3; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D JCM7685_0408 entF1; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
C 01006 Prenyltransferases [BR:pamn01006]
D JCM7685_2786 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D JCM7685_0781 farnesyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D JCM7685_1612 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JCM7685_1857 putative phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D JCM7685_1609 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JCM7685_0502 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D JCM7685_1275 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pamn01007]
D JCM7685_1666 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D JCM7685_1509 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JCM7685_2303 gltX3; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JCM7685_1877 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D JCM7685_1223 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JCM7685_1719 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JCM7685_1859 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JCM7685_2064 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JCM7685_2577 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JCM7685_2196 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JCM7685_0640 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JCM7685_3003 leuS; Leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JCM7685_0925 aspS; aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JCM7685_1206 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JCM7685_2574 glyQ; glycyl-tRNA synthetase, subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JCM7685_2576 glyS; glycyl-tRNA synthetase, subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JCM7685_0742 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JCM7685_1748 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JCM7685_2269 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JCM7685_2506 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JCM7685_0480 pheS; phenylalanine-tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JCM7685_0485 pheT; phenylalanine-tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JCM7685_1953 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0506 tyrB; Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JCM7685_0531 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JCM7685_1775 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JCM7685_1352 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D pAMV3p0005 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D JCM7685_0527 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JCM7685_0768 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JCM7685_0647 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D pAMV3p0007 bioA; adenosylmethionine-8-amino-7-oxononanoateaminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D JCM7685_1928 taurine-pyruvate aminotransferase K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D JCM7685_2684 D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D JCM7685_0307 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JCM7685_1476 serine-glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D JCM7685_0581 aminotransferase, partial K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D JCM7685_2669 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pamn00194]
D JCM7685_1914 atpC; F-type H+-transporting ATPase, subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JCM7685_1915 atpD; F-type H+-transporting ATPase, subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JCM7685_1916 atpG; F-type H+-transporting ATPase, subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JCM7685_1917 atpA; F-type H+-transporting ATPase, subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JCM7685_1918 atpH; F-type H+-transporting ATPase, subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JCM7685_1043 atpF1; ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JCM7685_1044 atpF3; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JCM7685_1042 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JCM7685_1041 atpB; ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JCM7685_1040 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pamn03000]
D JCM7685_1423 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JCM7685_0776 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JCM7685_1608 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D JCM7685_1046 methylated-DNA-protein-cysteine methyltransferase, partial K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D pAMV3p0068 methylated-DNA-protein-cysteinemethyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D JCM7685_0745 methylated-DNA-protein-cysteinemethyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D pAMV3p0251 transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D pAMV3p0470 transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D pAMV3p0535 transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D JCM7685_2116 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D pAMV3p0036 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D pAMV3p0160 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D pAMV3p0385 pcaQ; pca operon transcriptional activator PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D JCM7685_0626 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D JCM7685_0010 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D JCM7685_0575 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D JCM7685_1234 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D pAMV3p0548 transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D pAMV3p0112 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D JCM7685_0291 deoR; DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D pAMV3p0586 transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D pAMV3p0563 transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D JCM7685_0836 LacI family transcription regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D JCM7685_2591 GntR family transcriptional regulator K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D pAMV3p0396 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D JCM7685_1239 BetI family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D pAMV3p0578 Transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D pAMV3p0448 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JCM7685_1368 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JCM7685_0490 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JCM7685_2274 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JCM7685_1329 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D pAMV3p0243 Transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D JCM7685_0532 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D JCM7685_2696 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D JCM7685_2919 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D JCM7685_1817 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D JCM7685_0991 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D pAMV3p0388 Transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D JCM7685_1477 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D JCM7685_0901 Crp family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JCM7685_2033 transcriptional activator protein FnrL K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D pAMV3p0440 narR; transcriptional activator NarR K13642 ftrB; CRP/FNR family transcriptional regulator, transcriptional activator FtrB
D pAMV1p0150 Crp/Fnr family transcriptional regulator, cyclic nucleotide-binding protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D pAMV1p0144 Crp/Fnr family transcriptional regulator K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D JCM7685_2478 BadM/Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D pAMV1p0153 BadM/Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D pAMV3p0248 transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D pAMV3p0340 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D pAMV1p0008 Cro/CI family transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D JCM7685_1137 XRE family transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D JCM7685_2161 helix-turn-helix domain-containing protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D pAMV1p0019 XRE family transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D JCM7685_0875 birA; biotin-acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D pAMV3p0148 acetoin catabolism regulatory protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D JCM7685_2905 modE; ModE molybdate transport repressor K02019 modE; molybdate transport system regulatory protein
D JCM7685_1369 putA1; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D pAMV1p0037 nosRn; transcriptional regulator NosR, N-terminal fragment K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D pAMV3p0224 nirI; nitrous oxide reductase regulatory protein K19343 nirI; NosR/NirI family transcriptional regulator, nitrite reductase regulator
D JCM7685_2069 stress-induced morphogen K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D pAMV3p0001 parB; partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_0210 parB1; Chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_0280 parB5; ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D pAMV1p0003 parB; parB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_0036 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_2419 ParB domain-containing protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_1349 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D JCM7685_0208 hrcA; HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor
D JCM7685_0181 TenA family transcription regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D JCM7685_0619 hypothetical protein K07735 algH; putative transcriptional regulator
D JCM7685_2562 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D JCM7685_1515 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D JCM7685_2524 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pamn03021]
D JCM7685_2698 rpoA; DNA-directed RNA polymerase, subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JCM7685_0600 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JCM7685_0601 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JCM7685_1798 rpoZ; DNA-directed RNA polymerase, subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JCM7685_1869 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JCM7685_0385 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D pAMV3p0478 ECF subfamily RNA polymerase sigma-24 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D JCM7685_0889 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D JCM7685_0317 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D JCM7685_1523 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D JCM7685_0595 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JCM7685_0709 response regulator receiver protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D JCM7685_2662 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D JCM7685_2663 anti-sigma B factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D JCM7685_2562 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D JCM7685_2760 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D JCM7685_0214 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pamn03019]
D JCM7685_2470 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D JCM7685_2767 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JCM7685_0877 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JCM7685_1068 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JCM7685_2009 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D pAMV3p0061 deaD; DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JCM7685_2895 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JCM7685_1856 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JCM7685_2996 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JCM7685_0214 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JCM7685_0664 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JCM7685_1548 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JCM7685_1006 RNA chaperone Hfq K03666 hfq; host factor-I protein
D JCM7685_1745 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D JCM7685_1339 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D JCM7685_1105 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D JCM7685_1501 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D JCM7685_0396 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D JCM7685_0458 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D JCM7685_1072 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D JCM7685_0518 ATP-dependent RNA helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pamn03011]
D JCM7685_1997 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JCM7685_2002 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JCM7685_2719 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JCM7685_1291 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JCM7685_2707 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JCM7685_2298 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JCM7685_0606 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JCM7685_2710 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JCM7685_2465 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JCM7685_2726 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JCM7685_2699 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JCM7685_0605 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JCM7685_2700 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JCM7685_2711 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JCM7685_2998 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JCM7685_2149 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JCM7685_2715 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JCM7685_2299 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JCM7685_2721 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JCM7685_1090 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JCM7685_0491 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JCM7685_0597 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JCM7685_2722 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JCM7685_2725 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JCM7685_2724 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JCM7685_2712 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JCM7685_2709 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JCM7685_2300 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JCM7685_0598 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JCM7685_0596 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JCM7685_0599 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JCM7685_2466 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JCM7685_2714 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JCM7685_2703 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JCM7685_2718 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JCM7685_2697 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JCM7685_2708 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JCM7685_2146 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JCM7685_0477 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JCM7685_1890 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JCM7685_2720 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JCM7685_2723 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JCM7685_2713 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JCM7685_1889 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JCM7685_0746 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JCM7685_2716 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JCM7685_2706 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JCM7685_2145 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JCM7685_2041 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JCM7685_1977 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JCM7685_2315 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JCM7685_0476 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JCM7685_0167 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JCM7685_1875 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D JCM7685_0151 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JCM7685_2460 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D pAMV3p0643 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JCM7685_0155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JCM7685_2464 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D pAMV3p0647 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JCM7685_0152 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JCM7685_2461 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D pAMV3p0644 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pamn03009]
D JCM7685_2767 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JCM7685_2768 era; GTP-binding protein Era K03595 era; GTPase
D JCM7685_1852 obg; GTP-binding protein ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D JCM7685_2562 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D JCM7685_0317 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D JCM7685_1523 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D JCM7685_0595 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JCM7685_2292 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D JCM7685_2512 ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D JCM7685_2956 Fmu (Sun) domain-containing protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D JCM7685_2021 ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D JCM7685_0631 16S rRNA (guanine(966)-N(2))-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D JCM7685_0501 16S ribosomal RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D JCM7685_2523 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D JCM7685_1714 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D JCM7685_1907 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D JCM7685_1607 rlmE; ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D JCM7685_0450 rlmH; rRNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D JCM7685_2104 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D JCM7685_2527 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D JCM7685_0463 rlmN; rRNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D JCM7685_0394 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D JCM7685_0371 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JCM7685_0988 RNA pseudouridylate synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D JCM7685_2692 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D JCM7685_0890 rluD; 23S rRNA pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JCM7685_0757 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D JCM7685_1282 GCN5-related N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D JCM7685_2148 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D JCM7685_0802 ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D JCM7685_0499 ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D JCM7685_2470 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D JCM7685_0726 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D pAMV3p0061 deaD; DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JCM7685_0740 GTP-binding protein EngA K03977 engA; GTPase
D JCM7685_1007 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D JCM7685_2751 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JCM7685_1797 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JCM7685_0367 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D JCM7685_0318 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D JCM7685_0449 iojap family protein K09710 ybeB; ribosome-associated protein
D JCM7685_1592 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D JCM7685_0304 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D pAMV3p0273 engD; GTP-dependent nucleic acid-binding protein engD K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:pamn03016]
D JCM7685_0494 ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D JCM7685_1509 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JCM7685_2303 gltX3; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JCM7685_1748 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JCM7685_2196 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JCM7685_3003 leuS; Leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JCM7685_2577 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JCM7685_2064 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JCM7685_0925 aspS; aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JCM7685_2506 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JCM7685_2269 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JCM7685_0742 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JCM7685_1859 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JCM7685_0640 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JCM7685_1206 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JCM7685_0480 pheS; phenylalanine-tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JCM7685_0485 pheT; phenylalanine-tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JCM7685_1223 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JCM7685_1719 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JCM7685_2008 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D JCM7685_2925 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JCM7685_2038 diadenosine tetraphosphate K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JCM7685_0878 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D JCM7685_0764 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D JCM7685_0369 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D JCM7685_1709 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JCM7685_2751 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JCM7685_1609 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JCM7685_0213 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D JCM7685_0212 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JCM7685_2960 selD; Selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D JCM7685_0666 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D JCM7685_2314 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D JCM7685_0207 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D JCM7685_0299 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D JCM7685_1247 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D pAMV3p0011 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D JCM7685_1666 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D JCM7685_2574 glyQ; glycyl-tRNA synthetase, subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JCM7685_2576 glyS; glycyl-tRNA synthetase, subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JCM7685_1877 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D JCM7685_0987 CMP/dCMP deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D JCM7685_1786 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D JCM7685_0999 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D JCM7685_1684 miaB; 2-methylthioadenine synthetase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D JCM7685_2789 2-methylthioadenine synthase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D JCM7685_1598 tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D JCM7685_1876 methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D JCM7685_2147 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D JCM7685_0371 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JCM7685_1885 tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JCM7685_2312 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D JCM7685_0412 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D JCM7685_1290 triosephosphate isomerase K13628 iscA; iron-sulfur cluster assembly protein
D JCM7685_0583 glycine cleavage T-protein (aminomethyltransferase) K06980 ygfZ; tRNA-modifying protein YgfZ
D JCM7685_2489 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D pAMV3p0533 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D JCM7685_0675 4Fe-4S ferredoxin, iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D JCM7685_0751 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D JCM7685_1246 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D JCM7685_0551 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D JCM7685_0758 peptidase M22 K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D JCM7685_0815 protein kinase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D JCM7685_1068 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JCM7685_2996 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pamn03012]
D JCM7685_0315 Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JCM7685_2094 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JCM7685_2013 ABC transporter, ATPase component K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D JCM7685_2003 tsf; elongation factor EF-Ts K02357 tsf; elongation factor Ts
D JCM7685_0586 elongation factor Tu K02358 tuf; elongation factor Tu
D JCM7685_0608 elongation factor Tu K02358 tuf; elongation factor Tu
D JCM7685_0607 elongation factor G K02355 fusA; elongation factor G
D JCM7685_0225 selB; Selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor
D JCM7685_2295 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D JCM7685_1611 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor
D JCM7685_2294 methylase of polypeptide chain release factors K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D JCM7685_1813 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D JCM7685_1536 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D JCM7685_2981 efp; elongation factor P K02356 efp; elongation factor P
D pAMV3p0314 efp; Elongation factor P K02356 efp; elongation factor P
D pAMV3p0315 Lysine-tRNA ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D JCM7685_1359 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D JCM7685_1191 peptide chain release factor RF-3 K02837 prfC; peptide chain release factor 3
D JCM7685_0513 peptidyl-tRNA hydrolase domain-containing protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pamn03110]
D JCM7685_1921 ClpA protein K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D JCM7685_0158 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D JCM7685_1811 clpX; ATP-dependent protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D JCM7685_0358 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D JCM7685_0664 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D pAMV3p0394 hscC; chaperone protein HscC K04045 hscC; molecular chaperone HscC
D JCM7685_1548 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JCM7685_0663 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JCM7685_2212 heat shock protein DnaJ domain protein K05801 djlA; DnaJ like chaperone protein
D JCM7685_0398 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D JCM7685_0209 grpE; molecular chaperone grpE K03687 GRPE; molecular chaperone GrpE
D JCM7685_1540 molecular chaperone IbpA K04080 ibpA; molecular chaperone IbpA
D JCM7685_1347 ribosome-associated heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D JCM7685_1549 groS; molecular chaperone GroES K04078 groES; chaperonin GroES
D JCM7685_1304 htrA; protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D JCM7685_0552 ftsH; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JCM7685_1041 atpB; ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D pAMV3p0152 papD; P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein
D JCM7685_0352 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D JCM7685_1158 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D JCM7685_0971 peptidyl-prolyl cis-trans isomerse K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D pAMV3p0446 surA; peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D JCM7685_0311 peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D JCM7685_2290 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D JCM7685_0361 thioredoxin K03671 TXN; thioredoxin
D JCM7685_2835 trxA; thioredoxin K05838 ybbN; putative thioredoxin
D JCM7685_0324 glutaredoxin K03676 grxC; glutaredoxin 3
D JCM7685_1789 glutaredoxin K07390 grxD; monothiol glutaredoxin
D JCM7685_1776 ccmG; cytochrome c biogenesis protein CcmG K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:pamn04131]
D JCM7685_2012 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JCM7685_0694 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JCM7685_1144 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JCM7685_0474 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JCM7685_2898 major facilitator transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:pamn03032]
D JCM7685_2191 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JCM7685_1423 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JCM7685_0776 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JCM7685_2779 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D JCM7685_2046 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D JCM7685_1996 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D JCM7685_1089 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JCM7685_1140 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JCM7685_1870 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JCM7685_1927 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JCM7685_1326 dnaE3; DNA polymerase III, subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JCM7685_1088 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JCM7685_2285 DNA polymerase III, subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D JCM7685_3005 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JCM7685_0959 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JCM7685_1409 DNA polymerase III, subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JCM7685_0381 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D pAMV1p0084 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JCM7685_1543 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JCM7685_2588 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JCM7685_2035 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JCM7685_1882 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JCM7685_1431 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JCM7685_2770 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JCM7685_0425 DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JCM7685_1338 DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JCM7685_0538 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pamn03036]
D JCM7685_1423 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JCM7685_0776 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JCM7685_2767 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JCM7685_0022 methylase/helicase K26273 SBNO; protein strawberry notch
D JCM7685_2426 putative methylase/helicase K26273 SBNO; protein strawberry notch
D pAMV3p0184 trans-acting regulatory protein hvrA K03746 hns; DNA-binding protein H-NS
D JCM7685_0350 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D JCM7685_2779 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D JCM7685_2046 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D JCM7685_1996 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D JCM7685_0723 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D JCM7685_1089 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JCM7685_2664 hemimethylated DNA binding protein K11940 hspQ; heat shock protein HspQ
D JCM7685_1325 DNA-binding ferritin-like protein (oxidative damage protectant) K04047 dps; starvation-inducible DNA-binding protein
D JCM7685_1006 RNA chaperone Hfq K03666 hfq; host factor-I protein
D JCM7685_1234 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D pAMV3p0448 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JCM7685_1368 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JCM7685_0490 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JCM7685_2274 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JCM7685_2976 smc; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D JCM7685_2061 segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D JCM7685_2060 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D JCM7685_1121 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JCM7685_0795 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JCM7685_2521 cell division protein FtsI (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JCM7685_2914 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JCM7685_2522 hypothetical protein K03586 ftsL; cell division protein FtsL
D JCM7685_1120 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D JCM7685_1111 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D JCM7685_0796 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D JCM7685_1122 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JCM7685_1255 hypothetical protein K09888 zapA; cell division protein ZapA
D JCM7685_0826 AFG1 family ATPase K06916 zapE; cell division protein ZapE
D JCM7685_1357 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JCM7685_2157 RND family efflux transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D JCM7685_2958 acrA; RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D pAMV3p0544 acrA; Acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D pAMV1p0022 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D pAMV1p0078 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D pAMV1p0077 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D pAMV1p0076 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D JCM7685_1832 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JCM7685_1833 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D JCM7685_1834 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D JCM7685_1836 rod shape-determining protein rodA K05837 rodA; rod shape determining protein RodA
D JCM7685_2142 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D JCM7685_0211 parA; Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D pAMV1p0002 parA; cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D JCM7685_1741 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D pAMV3p0001 parB; partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_0210 parB1; Chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_0280 parB5; ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D pAMV1p0003 parB; parB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_0036 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_2419 ParB domain-containing protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_0425 DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JCM7685_1338 DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JCM7685_0212 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JCM7685_1876 methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D JCM7685_0468 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D JCM7685_1768 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D JCM7685_2525 Mrp/NBP35 family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JCM7685_2308 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pamn03400]
D JCM7685_0966 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JCM7685_2585 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JCM7685_1047 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JCM7685_0162 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JCM7685_0313 mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JCM7685_0708 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JCM7685_2093 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JCM7685_1046 methylated-DNA-protein-cysteine methyltransferase, partial K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D pAMV3p0068 methylated-DNA-protein-cysteinemethyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D JCM7685_0745 methylated-DNA-protein-cysteinemethyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D JCM7685_1989 alkB; alkylated DNA repair protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D pAMV1p0140 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JCM7685_0615 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JCM7685_1728 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JCM7685_0788 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JCM7685_1092 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JCM7685_1200 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JCM7685_2836 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JCM7685_2071 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JCM7685_1882 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JCM7685_2035 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JCM7685_0851 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D JCM7685_1739 uvrB; excinuclease ABC, subunit B K03702 uvrB; excinuclease ABC subunit B
D JCM7685_0654 excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D JCM7685_1978 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JCM7685_0600 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JCM7685_0601 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JCM7685_2698 rpoA; DNA-directed RNA polymerase, subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JCM7685_1798 rpoZ; DNA-directed RNA polymerase, subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JCM7685_1922 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JCM7685_2654 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JCM7685_2949 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D JCM7685_1828 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JCM7685_2787 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JCM7685_1326 dnaE3; DNA polymerase III, subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JCM7685_1088 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JCM7685_2285 DNA polymerase III, subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D JCM7685_3005 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JCM7685_0959 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JCM7685_1409 DNA polymerase III, subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JCM7685_0381 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D pAMV1p0084 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JCM7685_1543 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JCM7685_1927 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JCM7685_2507 recA; recombinase A K03553 recA; recombination protein RecA
D JCM7685_0557 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JCM7685_0555 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JCM7685_0558 ruvC; Holliday junction resolvase RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JCM7685_0471 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D JCM7685_1733 DNA repair protein RadA/Sms K04485 radA; DNA repair protein RadA/Sms
D JCM7685_1087 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JCM7685_1881 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JCM7685_1085 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JCM7685_1541 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JCM7685_1125 recN; DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D JCM7685_0362 UvrD-like domain-containing DNA helicase protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D JCM7685_0363 DNA helicase K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D JCM7685_2863 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D JCM7685_0242 DNA helicase K19789 radD; DNA repair protein RadD
D JCM7685_1306 helicase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D pAMV3p0514 DNA repair protein K10979 ku; DNA end-binding protein Ku
D pAMV3p0280 DNA repair protein K10979 ku; DNA end-binding protein Ku
D pAMV3p0281 ykoU2; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D JCM7685_1431 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JCM7685_2770 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JCM7685_0538 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JCM7685_2779 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D JCM7685_2046 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D JCM7685_1996 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D JCM7685_2895 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D pAMV3p0184 trans-acting regulatory protein hvrA K03746 hns; DNA-binding protein H-NS
D JCM7685_0350 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D JCM7685_0045 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D JCM7685_0584 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D JCM7685_0962 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D JCM7685_1958 hypothetical protein K14160 imuA; protein ImuA
D JCM7685_0043 hypothetical protein K14160 imuA; protein ImuA
D JCM7685_1959 hypothetical protein K14161 imuB; protein ImuB
D JCM7685_0042 imuB; DNA repair nucleotidyltransferase/DNA polymerase-like protein K14161 imuB; protein ImuB
D JCM7685_1960 dnaE2; DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D JCM7685_0041 dnaE1; DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D JCM7685_2773 ATP-dependent helicase, DEAD/DEAH box family protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D pAMV3p0262 nrdE; Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JCM7685_2273 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JCM7685_1302 nrdJ; ribonucleoside-diphosphate reductase, subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D pAMV3p0263 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pamn03029]
D JCM7685_0660 ubiquinol-cytochrome C reductase, cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D JCM7685_0315 Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JCM7685_2094 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JCM7685_2003 tsf; elongation factor EF-Ts K02357 tsf; elongation factor Ts
D JCM7685_0586 elongation factor Tu K02358 tuf; elongation factor Tu
D JCM7685_0608 elongation factor Tu K02358 tuf; elongation factor Tu
D JCM7685_0607 elongation factor G K02355 fusA; elongation factor G
D JCM7685_1346 helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D JCM7685_2768 era; GTP-binding protein Era K03595 era; GTPase
D JCM7685_1223 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JCM7685_3003 leuS; Leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JCM7685_0925 aspS; aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JCM7685_2064 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JCM7685_2530 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JCM7685_2912 amiE; amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JCM7685_2075 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JCM7685_2531 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JCM7685_1927 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JCM7685_1616 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D JCM7685_0664 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JCM7685_0209 grpE; molecular chaperone grpE K03687 GRPE; molecular chaperone GrpE
D JCM7685_1548 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JCM7685_1549 groS; molecular chaperone GroES K04078 groES; chaperonin GroES
D JCM7685_0663 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JCM7685_1709 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JCM7685_1789 glutaredoxin K07390 grxD; monothiol glutaredoxin
D JCM7685_0894 hypothetical protein K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
D JCM7685_2525 Mrp/NBP35 family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JCM7685_1275 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JCM7685_1277 ctaG; cytochrome C oxidase subunit XI assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D JCM7685_1599 ctaA; heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D JCM7685_2310 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D pAMV3p0069 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D JCM7685_1279 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D pAMV3p0539 Electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D JCM7685_1159 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pamn02000]
D JCM7685_0582 ABC transporter permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D JCM7685_0591 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D pAMV3p0292 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JCM7685_0395 multidrug ABC transporter ATPase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JCM7685_0811 multidrug ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D pAMV3p0131 truncated multidrug transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JCM7685_0772 ABC-type protease/lipase transport system, ATPase and permease component K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D pAMV3p0458 macB1; macrolide export ATP-binding/permease macB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D pAMV3p0473 macB3; macrolide ABC transporter ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D JCM7685_1546 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D JCM7685_2209 cysP3; sulfate ABC transporter, periplasmic protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D JCM7685_1257 cysP1; sulfate ABC transporter, periplasmic component K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D JCM7685_2210 cysU; sulfate ABC transporter, permease protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D JCM7685_1258 cysT; sulfate ABC transporter, permease component K02046 cysU; sulfate/thiosulfate transport system permease protein
D JCM7685_2211 cysW3; sulfate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D JCM7685_1259 cysW1; sulfate ABC transporter, permease component K02047 cysW; sulfate/thiosulfate transport system permease protein
D JCM7685_2208 cysA3; sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D JCM7685_1260 cysA1; sulfate/molybdate ABC transporter, ATPase component K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D JCM7685_2906 modA; Molybdate-binding periplasmic protein K02020 modA; molybdate transport system substrate-binding protein
D JCM7685_2907 modB; Molybdenum transport system permease protein modB K02018 modB; molybdate transport system permease protein
D JCM7685_2908 modC; Molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D pAMV3p0125 tauA; taurine ABC transporter, periplasmic taurine-binding protein K15551 tauA; taurine transport system substrate-binding protein
D pAMV3p0127 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein
D pAMV3p0126 tauB; Taurine import ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D pAMV3p0487 ssuA; aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D JCM7685_1974 tauA1; nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D pAMV3p0488 ssuC; aliphatic sulfonates transport permease protein ssuC K15554 ssuC; sulfonate transport system permease protein
D JCM7685_1972 tauC1; nitrate/sulfonate/bicarbonate ABC transporter, permease K15554 ssuC; sulfonate transport system permease protein
D pAMV3p0489 ssuB; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D JCM7685_1973 tauB1; nitrate/sulfonate/bicarbonate ABC transporter, ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D pAMV3p0079 iron ABC transporter K02012 afuA; iron(III) transport system substrate-binding protein
D JCM7685_3039 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein
D pAMV3p0180 spermidine/putrescine ABC transporter, periplasmic binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JCM7685_1104 ABC polyamine transporter K11069 potD; spermidine/putrescine transport system substrate-binding protein
D pAMV3p0182 polyamine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D JCM7685_1863 putative spermidine/putrescine transport system, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D pAMV3p0181 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D JCM7685_1864 putative spermidine/putrescine transport system, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D pAMV3p0183 potA3; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D JCM7685_1862 potA3; spermidine/putrescine transport system, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D JCM7685_2118 polyamine/opine ABC transporter, substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JCM7685_0952 spermidine/putrescine transport system, substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JCM7685_0953 spermidine/putrescine transport system, substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JCM7685_2652 spermidine/putrescine ABC transporter, substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D pAMV3p0169 polyamine ABC transporter, periplasmic polyamine-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JCM7685_0955 spermidine/putrescine transport system, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D JCM7685_2650 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D pAMV3p0171 polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D JCM7685_0954 spermidine/putrescine transport system, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D JCM7685_2651 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D pAMV3p0170 polyamine ABC transporter substrate-binding protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D JCM7685_0951 potA1; spermidine/putrescine import ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D JCM7685_2649 spermidine/putrescine ABC transporter ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D pAMV3p0168 potA1; Spermidine/putrescine import ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D pAMV3p0464 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D pAMV3p0255 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D pAMV3p0571 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D JCM7685_3017 glycine betaine/proline ABC transporter, periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D JCM7685_0680 ABC-type proline/glycine betaine transport systems, periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D JCM7685_1238 glycine betaine transport system, periplasmic protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D pAMV1p0094 glycine betaine/L-proline ABC transport system substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D pAMV3p0568 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D pAMV3p0569 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D JCM7685_3015 glycine betaine/proline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D JCM7685_0330 ABC transporter permease, partial K02001 proW; glycine betaine/proline transport system permease protein
D JCM7685_1237 glycine betaine transport system, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D pAMV1p0095 glycine betaine/L-proline ABC transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D pAMV3p0570 opuAA; Glycine betaine transport ATP-binding protein OpuAA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D JCM7685_3016 glycine betaine/proline ABC transporter, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D JCM7685_1236 glycine betaine/proline transport system, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D pAMV1p0096 glycine betaine/L-proline ABC transport system ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D pAMV3p0602 osmF; ABC transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D pAMV3p0603 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D pAMV3p0605 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D pAMV3p0604 yehX; osmoprotectant uptake system ATP-binding protein YehX K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D JCM7685_0180 ABC transporter ATP-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D JCM7685_0183 putative ABC transporter permease protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D JCM7685_0182 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D JCM7685_2819 tauA3; nitrate/sulfonate/bicarbonate ABC transporter, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D pAMV3p0145 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D JCM7685_1839 sulfonate/nitrate/taurine transport system, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D pAMV3p0146 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D JCM7685_2820 tauC3; nitrate/sulfonate/bicarbonate ABC transporter, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D JCM7685_2821 tauB3; nitrate/sulfonate/bicarbonate ABC transporter, ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D pAMV3p0529 ugpC; glycerol-3-phosphate ABC transporter ATPase K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JCM7685_2983 xylF; ABC-type xylose transport system, periplasmic component K10546 chvE; putative multiple sugar transport system substrate-binding protein
D JCM7685_2985 xylH; ABC-type xylose transport system, permease component K10547 gguB; putative multiple sugar transport system permease protein
D JCM7685_2984 xylG; D-xylose ABC transporter, ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JCM7685_0720 sugar ABC transporter, periplasmic component K10552 frcB; fructose transport system substrate-binding protein
D JCM7685_0719 ABC transporter permease K10553 frcC; fructose transport system permease protein
D JCM7685_0718 sugar ABC transporter ATP-binding protein K10554 frcA; fructose transport system ATP-binding protein
D pAMV3p0558 ABC ribose transporter K10439 rbsB; ribose transport system substrate-binding protein
D pAMV3p0559 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D pAMV3p0560 rbsA; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D pAMV3p0101 ABC sugar (glycerol) transporter, periplasmic binding protein K17321 glpV; glycerol transport system substrate-binding protein
D pAMV3p0098 Glycerol-3-phosphate ABC transporter K17322 glpP; glycerol transport system permease protein
D pAMV3p0099 carbohydrate ABC transporter membrane protein 2, CUT1 family K17323 glpQ; glycerol transport system permease protein
D pAMV3p0096 ABC transporter K17324 glpS; glycerol transport system ATP-binding protein
D pAMV3p0097 Glycerol-3-phosphate-transporting ATPase K17325 glpT; glycerol transport system ATP-binding protein
D pAMV3p0532 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D pAMV3p0531 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D pAMV3p0530 mannitol ABC transporter permease K10229 smoG; polyol transport system permease protein
D JCM7685_0756 membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D JCM7685_0754 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JCM7685_0753 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JCM7685_0755 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JCM7685_1809 putative toluene transport system protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JCM7685_0623 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JCM7685_1589 ABC-type transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JCM7685_0625 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JCM7685_1590 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D JCM7685_0624 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D JCM7685_0622 hypothetical protein K18480 linN; cholesterol transport system auxiliary component
D JCM7685_0774 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D JCM7685_1265 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D JCM7685_1266 pstC; phosphate ABC transporter, permease component PstC K02037 pstC; phosphate transport system permease protein
D JCM7685_1267 pstA; phosphate ABC transporter, permease component PstA K02038 pstA; phosphate transport system permease protein
D JCM7685_1268 pstB; phosphate ABC transporter, ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D pAMV3p0351 glnH; Glutamine-binding periplasmic protein GlnH K10036 glnH; glutamine transport system substrate-binding protein
D pAMV3p0350 glnP; Glutamine transport system permease protein glnP K10037 glnP; glutamine transport system permease protein
D pAMV3p0349 glnQ; Glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D JCM7685_2370 general L-amino acid transport system, substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D JCM7685_2689 glutamate/glutamine/aspartate/asparagine-bindingprotein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D JCM7685_2369 general L-amino acid transport system permease K09970 aapQ; general L-amino acid transport system permease protein
D JCM7685_2688 glutamate/glutamine/aspartate/asparagine transport system, permease protein K09970 aapQ; general L-amino acid transport system permease protein
D JCM7685_2368 general L-amino acid transport system permease K09971 aapM; general L-amino acid transport system permease protein
D JCM7685_2687 glutamate/glutamine/aspartate/asparagine transport system, permease protein K09971 aapM; general L-amino acid transport system permease protein
D JCM7685_2367 general L-amino acid transport system, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D JCM7685_2686 general L-amino acid transport system, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D pAMV3p0332 argT; Lysine-arginine-ornithine-binding periplasmic protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D pAMV3p0334 hisM; Histidine ABC transporter, permease protein HisM K10023 aotM; arginine/ornithine transport system permease protein
D pAMV3p0333 hisQ; Histidine transport system permease protein hisQ K10024 aotQ; arginine/ornithine transport system permease protein
D pAMV3p0331 occP; Octopine permease ATP-binding protein P K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D pAMV3p0197 ABC transporter, periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JCM7685_3025 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JCM7685_1488 branched-chain amino acid transport system, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D pAMV3p0434 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein
D pAMV3p0208 amino acid ABC substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D pAMV1p0111 ABC transporter, periplasmic substrate-binding protein, putative K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JCM7685_3029 amino acid ABC-type transport system, permease components K01997 livH; branched-chain amino acid transport system permease protein
D JCM7685_1484 branched-chain amino acid transport system permease K01997 livH; branched-chain amino acid transport system permease protein
D pAMV3p0437 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JCM7685_1483 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D JCM7685_3028 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein
D pAMV3p0438 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JCM7685_3027 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JCM7685_1487 branched-chain amino acid transport system, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D pAMV3p0435 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JCM7685_1486 branched-chain amino acid transport system, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JCM7685_3026 ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D pAMV3p0436 histidinol dehydrogenase, ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JCM7685_1286 metQ; DL-methionine transporter, substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein
D JCM7685_1287 metI; DL-methionine transporter, permease subunit K02072 metI; D-methionine transport system permease protein
D JCM7685_1288 metN; DL-methionine transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JCM7685_1649 amino acid ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JCM7685_1657 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JCM7685_1497 polar amino acid transport system, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JCM7685_1650 amino acid ABC transporter, permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D JCM7685_1651 amino acid ABC transporter, permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D JCM7685_1495 polar amino acid transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D JCM7685_1496 polar amino acid transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D JCM7685_1498 polar amino acid transport system, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D JCM7685_1646 amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D JCM7685_1663 peptide/nickel transport system, substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D pAMV3p0300 dppA; Periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D pAMV3p0301 dppB; Dipeptide transport system permease protein dppB K12369 dppB; dipeptide transport system permease protein
D pAMV3p0302 dppC; Dipeptide transport system permease protein dppC K12370 dppC; dipeptide transport system permease protein
D pAMV3p0303 dppD; Dipeptide transport ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D pAMV3p0304 dppF; Dipeptide transport ATP-binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein
D JCM7685_1823 peptide/nickel transport system, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JCM7685_2496 dipeptide ABC transporter periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D pAMV3p0594 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JCM7685_2672 peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D pAMV3p0403 ABC-type dipeptide transport system K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JCM7685_1822 peptide/nickel transport system, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JCM7685_2497 dppB1; dipeptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D pAMV3p0593 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JCM7685_2679 dppB3; peptide/opine/nickel uptake family ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D pAMV3p0404 ABC-type dipeptide transport systems K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JCM7685_1821 peptide/nickel transport system, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JCM7685_2498 dppC1; dipeptide/oligopeptide/nickel ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D pAMV3p0592 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JCM7685_2680 dppC3; peptide/opine/nickel uptake family ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D pAMV3p0405 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JCM7685_1820 peptide/nickel transport system, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JCM7685_2681 peptide/opine/nickel uptake family ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D pAMV3p0406 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D pAMV3p0591 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JCM7685_2495 glutathione ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JCM7685_2221 peptide/nickel transport system, substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D JCM7685_2220 peptide/nickel transport system, permease protein K13894 yejB; microcin C transport system permease protein
D JCM7685_2219 peptide/nickel transport system, permease protein K13895 yejE; microcin C transport system permease protein
D JCM7685_2218 peptide/nickel transport system, ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D pAMV3p0285 hemin ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D pAMV3p0284 heme ABC transporter permease K25133 hmuU; heme transport system permease protein
D pAMV3p0283 hmuV; Hemin import ATP-binding protein HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D JCM7685_1442 ABC cobalamin/Fe3+-siderophore transporter, periplasmic substrate-binding subunit K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D pAMV3p0174 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JCM7685_3021 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D pAMV1p0012 putative cobalamin ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D pAMV3p0367 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JCM7685_0404 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JCM7685_1443 ABC cobalamin/Fe3+-siderophore transporter, permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D pAMV3p0173 transport system permease K02015 ABC.FEV.P; iron complex transport system permease protein
D pAMV1p0011 ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D pAMV3p0366 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D JCM7685_0403 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D pAMV3p0172 ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JCM7685_3022 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D pAMV1p0010 ABC cobalamin/Fe3+-siderophore transporter, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D pAMV3p0365 fecE3; histidinol-phosphatase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JCM7685_0402 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JCM7685_1444 ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JCM7685_0990 znuA; zinc ABC transporter periplasmic zinc-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D JCM7685_1294 yrpE; hypothetical protein K09815 znuA; zinc transport system substrate-binding protein
D JCM7685_2738 zinc transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D JCM7685_0993 znuB; zinc ABC transporter, permease protein ZnuB K09816 znuB; zinc transport system permease protein
D JCM7685_2736 zinc transport system, permease protein K09816 znuB; zinc transport system permease protein
D JCM7685_0992 znuC; zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D JCM7685_2737 zinc transport system, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D pAMV3p0256 yfeA; periplasmic metal ion-binding lipoprotein K11604 sitA; manganese/iron transport system substrate-binding protein
D pAMV3p0258 yfeC; Chelated iron transport system membrane protein yfeC K11605 sitC; manganese/iron transport system permease protein
D pAMV3p0259 yfeD; Chelated iron transport system membrane protein yfeD K11606 sitD; manganese/iron transport system permease protein
D pAMV3p0257 yfeB; Chelated iron transport system membrane protein YfeB K11607 sitB; manganese/iron transport system ATP-binding protein
D pAMV3p0027 bioY; biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component
D pAMV3p0026 cbiQ; ABC transporter permease K16783 bioN; biotin transport system permease protein
D pAMV3p0025 cbiO; cobalt ABC transporter K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D JCM7685_2353 membrane protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D JCM7685_2354 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D JCM7685_2355 cobalt ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JCM7685_2611 sugar ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D JCM7685_1630 capsule polysaccharide export inner-membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D JCM7685_2612 capsule polysaccharide export protein K10107 kpsE; capsular polysaccharide transport system permease protein
D JCM7685_1631 capsular polysaccharide transport system, ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D JCM7685_2613 capsular polysaccharide transport system ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D JCM7685_2287 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D JCM7685_2288 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D JCM7685_0303 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D pAMV1p0032 nosY; membrane protein NosY K19341 nosY; Cu-processing system permease protein
D pAMV1p0033 nosF; copper transport ATP-binding protein NosF K19340 nosF; Cu-processing system ATP-binding protein
D JCM7685_1332 LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D JCM7685_1333 lolD; lipoprotein-releasing system, ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D JCM7685_1778 ccmC; heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D JCM7685_1779 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D JCM7685_1780 ccmA; heme exporter protein CcmA, ATPase K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D JCM7685_0796 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D JCM7685_0795 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JCM7685_0186 putative multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JCM7685_0767 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JCM7685_0799 ABC-2 type transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JCM7685_0187 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JCM7685_2037 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JCM7685_0798 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D pAMV3p0055 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D JCM7685_2251 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D pAMV3p0054 ABC-type antimicrobial peptide transport system K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JCM7685_2250 ABC transporter, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JCM7685_1706 sufC; ATP-dependent transporter sufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D pAMV3p0264 membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D JCM7685_0529 norM; MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D JCM7685_0333 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D pAMV3p0209 proP; proline/glycine betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D pAMV3p0393 major facilitator transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D pAMV3p0411 major facilitator transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D pAMV3p0441 narK; nitrite transporter, NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D pAMV3p0067 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D JCM7685_1138 multidrug MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D JCM7685_2073 multidrug MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D JCM7685_1537 major facilitator transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D JCM7685_0571 multidrug MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D pAMV3p0132 smvA; Methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D JCM7685_2590 fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D JCM7685_2898 major facilitator transporter K06902 UMF1; MFS transporter, UMF1 family
D JCM7685_1193 major facilitator transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D JCM7685_0341 major facilitator superfamily transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D JCM7685_0824 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D JCM7685_2322 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D JCM7685_1074 phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D JCM7685_1073 phosphotransferase system, IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D JCM7685_0305 PTS lactose transporter subunit IIC K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D JCM7685_2447 phosphotransferase system mannitol/fructose-specific IIA domain-containing protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D JCM7685_1545 aquaporin Z K06188 aqpZ; aquaporin Z
D pAMV1p0127 ammonium transporter family protein K03320 amt; ammonium transporter, Amt family
D JCM7685_0780 ammonia channel protein K03320 amt; ammonium transporter, Amt family
D JCM7685_1340 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_2170 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_2190 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_3007 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D pAMV3p0271 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_1052 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_2363 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_2777 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_2380 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D pAMV3p0418 glutathione S-transferase I, partial K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_0638 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_0639 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_0676 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JCM7685_0488 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D JCM7685_1428 MscS mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel
D JCM7685_1300 magnesium transporter MgtE K06213 mgtE; magnesium transporter
D pAMV3p0041 AmiS/UreI transporter K22112 amiS; putative amide transporter protein
D JCM7685_2884 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D JCM7685_2936 motB; Flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JCM7685_1770 flagellar motor protein K02557 motB; chemotaxis protein MotB
D JCM7685_0578 biopolymer transport protein ExbB/TolQ K03561 exbB; biopolymer transport protein ExbB
D pAMV1p0061 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D pAMV1p0059 transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D JCM7685_0577 biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D JCM7685_0545 tolQ; biopolymer transport protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D JCM7685_0546 tolR; biopolymer transport protein TolR K03560 tolR; biopolymer transport protein TolR
D JCM7685_0912 magnesium/cobalt transport protein K03284 corA; magnesium transporter
D JCM7685_2693 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D pAMV3p0247 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D JCM7685_0574 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JCM7685_1769 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JCM7685_3001 porin family protein K08720 ompU; outer membrane protein OmpU
D JCM7685_2771 outer membrane protein K16079 omp31; outer membrane immunogenic protein
D JCM7685_2632 outer membrane protein K16079 omp31; outer membrane immunogenic protein
D JCM7685_0503 OmpA/MotB domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D pAMV3p0153 papC; P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein
D pAMV1p0088 putative ferri-siderophore receptor K19611 fepA; ferric enterobactin receptor
D pAMV1p0013 TonB-dependent receptor, putative outer membrane cobalamin receptor protein K16092 btuB; vitamin B12 transporter
D pAMV3p0475 TonB-dependent siderophore receptor, truncated K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D JCM7685_2494 outer membrane ferric siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D pAMV3p0203 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D JCM7685_2743 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D pAMV3p0019 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D pAMV3p0157 TonB-denpendent receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D pAMV3p0355 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D JCM7685_0298 ligand-gated channel K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D pAMV3p0287 TonB-denpendent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D pAMV3p0176 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JCM7685_0979 ferric siderophore receptor, partial K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D pAMV3p0372 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JCM7685_2965 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein
D pAMV3p0542 RND efflux system outer membrane lipoprotein K18904 nodT; outer membrane protein, multidrug efflux system
D JCM7685_1518 capsule polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D JCM7685_1616 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D JCM7685_1124 ComL DNA uptake lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D JCM7685_2921 surface antigen (D15) K07278 tamA; translocation and assembly module TamA
D JCM7685_2920 hypothetical protein K09800 tamB; translocation and assembly module TamB
D JCM7685_0302 organic solvent tolerance protein OstA K09774 lptA; lipopolysaccharide export system protein LptA
D JCM7685_0301 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D JCM7685_2289 organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D JCM7685_3004 secreted periplasmic protein K03643 lptE; LPS-assembly lipoprotein
D JCM7685_1593 hemolysin K06189 corC; hemolysin (HlyC) family protein
D JCM7685_2977 LrgA family protein K06518 cidA; holin-like protein
D pAMV3p0402 gabP; GABA permease K11735 gabP; GABA permease
D JCM7685_2748 amino acid transporter K16238 eat; ethanolamine permease
D JCM7685_2158 mexB; multidrug resistance protein MexB K18138 acrB; multidrug efflux pump
D JCM7685_2959 acrD; putative aminoglycoside efflux pump K18138 acrB; multidrug efflux pump
D pAMV3p0543 acrB; Acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D pAMV1p0023 acrB; RND efflux system, inner membrane transporter K18138 acrB; multidrug efflux pump
D JCM7685_2894 acriflavin resistance protein K21134 triC; multidrug efflux pump
D JCM7685_1853 multidrug transporter K03297 emrE; small multidrug resistance pump
D JCM7685_1724 membrane transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D JCM7685_0737 RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D JCM7685_0168 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JCM7685_1337 putative membrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D pAMV3p0013 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D pAMV3p0630 BCCT transporter, truncated K05020 opuD; glycine betaine transporter
D pAMV3p0471 opuD; Glycine betaine transporter OpuD K05020 opuD; glycine betaine transporter
D pAMV3p0522 actP; Acetate transporter ActP K14393 actP; cation/acetate symporter
D pAMV3p0059 dctA; C4-dicarboxylate ABC transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D pAMV1p0038 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D JCM7685_0011 nhaA; Na(+)/H(+) antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D JCM7685_2076 glutathione-regulated potassium-efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D JCM7685_2572 cation transporter K03498 trkH; trk/ktr system potassium uptake protein
D JCM7685_1005 trkH; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D JCM7685_1004 trkA; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D pAMV3p0447 nitrate reductase K09016 rutG; putative pyrimidine permease RutG
D JCM7685_1470 uracil-xanthine permease K24206 uacT; uric acid transporter
D pAMV3p0139 xanthine/uracil permease K24206 uacT; uric acid transporter
D JCM7685_1986 xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D pAMV3p0462 eriC; chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D pAMV3p0338 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D JCM7685_1380 chromate transport protein K07240 chrA; chromate transporter
D JCM7685_0296 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D JCM7685_0981 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D JCM7685_0013 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D JCM7685_2666 sodium:phosphate symporter K03324 yjbB; phosphate:Na+ symporter
D pAMV3p0342 arsB; Arsenite resistance protein ArsB K03325 ACR3; arsenite transporter
D JCM7685_1758 multicomponent K+:H+ antiporter, subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D JCM7685_1759 multicomponent K+:H+ antiporter, subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D JCM7685_0563 multicomponent K+:H+ antiporter, subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D JCM7685_1760 multicomponent K+:H+ antiporter, subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D JCM7685_1761 multicomponent K+:H+ antiporter, subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D JCM7685_1762 multicomponent K+:H+ antiporter, subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D JCM7685_0565 multisubunit Na+/H+ antiporter, subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D JCM7685_1763 multicomponent K+:H+ antiporter, subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D JCM7685_0561 multicomponent Na+/H+ antiporter antiporter, partial K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D JCM7685_1717 virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D JCM7685_0411 malate transporter K13936 mdcF; malonate transporter and related proteins
D JCM7685_0956 auxin efflux carrier K13936 mdcF; malonate transporter and related proteins
D pAMV3p0049 kup; potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D JCM7685_1235 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D JCM7685_2331 LysE type translocator K05835 rhtC; threonine efflux protein
D JCM7685_2757 branched-chain amino acid transporter AzlC K26605 azlC; branched chain amino acid efflux pump
D JCM7685_2756 branched-chain amino acid transporter AzlD K26606 azlD; branched chain amino acid efflux pump
D pAMV3p0082 tctA1; tripartite tricarboxylate transporter TctA, truncated K07793 tctA; putative tricarboxylic transport membrane protein
D JCM7685_3050 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D pAMV3p0081 C4-dicarboxylate ABC transporter K07794 tctB; putative tricarboxylic transport membrane protein
D pAMV3p0080 C4-dicarboxylate ABC transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D JCM7685_2902 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D JCM7685_1818 membrane protein K22736 VIT; vacuolar iron transporter family protein
D JCM7685_2283 multiple antibiotic resistance (MarC)-like protein K05595 marC; multiple antibiotic resistance protein
D JCM7685_1111 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D JCM7685_0977 iron transporter permease K07243 FTR; high-affinity iron transporter
D JCM7685_0974 iron transporter K07224 efeO; iron uptake system component EfeO
D JCM7685_0976 iron transport periplasmic lipoprotein K07224 efeO; iron uptake system component EfeO
D JCM7685_0975 iron-dependent peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D JCM7685_0576 TonB family protein K03832 tonB; periplasmic protein TonB
D JCM7685_0549 OmpA domain-containing protein K03640 pal; peptidoglycan-associated lipoprotein
D JCM7685_0547 TolA family protein, partial K03646 tolA; colicin import membrane protein
D JCM7685_0548 tolB; translocation protein TolB K03641 tolB; TolB protein
D JCM7685_2469 cytochrome c biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D pAMV3p0442 narG; nitrate reductase A subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D pAMV3p0443 narH; nitrate reductase A subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D pAMV3p0445 narI; nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D JCM7685_0572 secretion protein, HlyD family K03543 emrA; membrane fusion protein, multidrug efflux system
D JCM7685_0771 HlyD family type I secretion membrane fusion protein K12537 hasE; membrane fusion protein, type I secretion system
D JCM7685_2157 RND family efflux transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D JCM7685_2958 acrA; RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D pAMV3p0544 acrA; Acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D pAMV1p0022 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JCM7685_2892 acriflavin resistance protein K21136 triA; membrane fusion protein, multidrug efflux system
D JCM7685_2893 acriflavin resistance protein K21137 triB; membrane fusion protein, multidrug efflux system
D pAMV3p0457 hemolysin secretion protein D K13888 macA; membrane fusion protein, macrolide-specific efflux system
D pAMV3p0474 RND family efflux transporter MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D JCM7685_2637 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D JCM7685_2636 lipopolysaccharide biosynthesis protein K25590 epsF; protein tyrosine kinase modulator
D JCM7685_0319 putative tryptophan-rich sensory protein K05770 TSPO; translocator protein
D JCM7685_1183 hypothetical protein K16348 ecnB; entericidin B
D JCM7685_1694 cytochrome c-type biogenesis protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D JCM7685_1471 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D JCM7685_2014 MltA-interacting MipA K07274 mipA; MipA family protein
C 02044 Secretion system [BR:pamn02044]
D JCM7685_2965 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein
D JCM7685_0772 ABC-type protease/lipase transport system, ATPase and permease component K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D JCM7685_0771 HlyD family type I secretion membrane fusion protein K12537 hasE; membrane fusion protein, type I secretion system
D JCM7685_2896 putative membrane protein K02221 yggT; YggT family protein
D JCM7685_1510 competence protein ComEC K02238 comEC; competence protein ComEC
D JCM7685_2882 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JCM7685_2880 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JCM7685_2888 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D JCM7685_2595 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JCM7685_2890 fliN; Flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D JCM7685_2891 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JCM7685_2599 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JCM7685_2881 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JCM7685_2438 conjugal transfer ATPase TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D JCM7685_2442 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D JCM7685_2443 conjugal transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D JCM7685_2444 conjugal transfer protein Trbl K20533 trbI; type IV secretion system protein TrbI
D JCM7685_2439 conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D JCM7685_2441 conjugal transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D pAMV1p0070 icmL; type VI secretion protein IcmL K11891 impL; type VI secretion system protein ImpL
D pAMV1p0069 impK; type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK
D pAMV1p0067 impJ; type VI secretion system protein ImpJ K11893 impJ; type VI secretion system protein ImpJ
D pAMV1p0055 impH; type VI secretion system protein ImpH K11895 impH; type VI secretion system protein ImpH
D pAMV1p0054 impG; type VI secretion system protein ImpG K11896 impG; type VI secretion system protein ImpG
D pAMV1p0053 impF; type VI secretion system protein ImpF K11897 impF; type VI secretion system protein ImpF
D pAMV1p0051 impC; type VI secretion system protein ImpC K11900 impC; type VI secretion system protein ImpC
D pAMV1p0050 impB; type VI secretion system protein ImpB K11901 impB; type VI secretion system protein ImpB
D pAMV1p0049 impA; type VI secretion system protein ImpA K11902 impA; type VI secretion system protein ImpA
D pAMV1p0052 type VI secretion system effector Hcp1 family K11903 hcp; type VI secretion system secreted protein Hcp
D pAMV3p0213 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG
D JCM7685_1449 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D JCM7685_1468 type VI secretion system, Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D pAMV3p0427 type VI secretion system K11904 vgrG; type VI secretion system secreted protein VgrG
D pAMV1p0056 clpV1-1; type VI secretion system ATPase K11907 vasG; type VI secretion system protein VasG
D pAMV1p0071 impM; type VI secretion system protein ImpM K11890 impM; type VI secretion system protein ImpM
D pAMV1p0048 impI; type VI secretion system protein ImpI K11894 impI; type VI secretion system protein ImpI
D pAMV3p0152 papD; P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein
D pAMV3p0153 papC; P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein
D pAMV3p0154 spore coat protein u K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D pAMV3p0151 spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D JCM7685_0310 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JCM7685_0352 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D JCM7685_1783 secD; preprotein translocase, subunit SecD K03072 secD; preprotein translocase subunit SecD
D JCM7685_0594 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JCM7685_1782 secF; preprotein translocase, subunit SecF K03074 secF; preprotein translocase subunit SecF
D JCM7685_1505 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JCM7685_2702 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JCM7685_2152 ffh; signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JCM7685_1210 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JCM7685_1784 preprotein translocase K03210 yajC; preprotein translocase subunit YajC
D JCM7685_2310 inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JCM7685_2282 twin-arginine translocation protein, TatA subunit K03116 tatA; sec-independent protein translocase protein TatA
D JCM7685_2281 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D JCM7685_2280 tatC; Sec-independent protein translocase K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pamn02042]
D JCM7685_0574 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JCM7685_1769 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:pamn02022]
D JCM7685_1493 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JCM7685_1270 phoB; phosphate regulon transcriptional regulatory protein phoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D pAMV1p0083 two component response regulator receiver protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D JCM7685_1321 two-component system, OmpR family, osmolarity sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D JCM7685_0309 chemotaxis protein CheY K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D pAMV3p0050 kdpD; histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JCM7685_2449 kdpD; osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D pAMV3p0051 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JCM7685_2448 KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JCM7685_3019 torS; TMAO reductase sytem sensor TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D JCM7685_3018 torR; DNA-binding response regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D pAMV3p0077 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D pAMV3p0078 transcriptional regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D JCM7685_2340 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JCM7685_2240 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D pAMV3p0459 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D JCM7685_1676 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D JCM7685_2241 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D JCM7685_0053 XRE family transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D JCM7685_0067 XRE family transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D pAMV1p0087 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D pAMV3p0308 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D JCM7685_2341 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D pAMV3p0107 histidine kinase, NarQ K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D pAMV3p0108 LuxR family transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D pAMV1p0134 putative serine cycle genes transcriptional activator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D JCM7685_2159 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D JCM7685_1000 ntrB; two-component system, NtrC family K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D JCM7685_1001 ntrC; two-component system, NtrC family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D JCM7685_1002 nitrY; nitrogen regulation sensor histidine kinase NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D JCM7685_1003 ntrX; nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D pAMV1p0039 dctB; two-component system sensor histidine kinase for C4-dicarboxylate transport K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D JCM7685_2473 two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D pAMV1p0040 dctD; two-component system transcriptional regulator for C4-dicarboxylate transport K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D pAMV3p0614 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D JCM7685_2001 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JCM7685_1689 response regulator receiver modulated diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D JCM7685_2511 two-component system, cell cycle sensor histidine kinase and response regulator CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D JCM7685_1883 chemotaxis protein CheY K13584 ctrA; two-component system, cell cycle response regulator CtrA
D pAMV1p0041 two-component hybrid sensor and regulator K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D JCM7685_0348 regB; sensor histidine kinase regB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D JCM7685_0349 chemotaxis protein CheY K15012 regA; two-component system, response regulator RegA
D JCM7685_0710 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB
C 02035 Bacterial motility proteins [BR:pamn02035]
D JCM7685_2001 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JCM7685_2595 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JCM7685_2891 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JCM7685_2599 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JCM7685_2881 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JCM7685_2882 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JCM7685_2880 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JCM7685_1146 flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D JCM7685_2165 surface presentation of antigens (SPOA) protein K02416 fliM; flagellar motor switch protein FliM
D JCM7685_2890 fliN; Flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D JCM7685_2888 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D JCM7685_2940 flgI; Flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D JCM7685_2602 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D JCM7685_2603 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D JCM7685_2887 fliL3; flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D JCM7685_2604 fliL1; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D JCM7685_2598 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D pAMV3p0550 flagellar hook-length control protein, partial K02414 fliK; flagellar hook-length control protein FliK
D JCM7685_2596 flgB; flagellar basal-body rod protein, FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JCM7685_2597 flgC; flagellar basal body rod protein, FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D pAMV3p0549 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D JCM7685_2600 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D JCM7685_2601 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D JCM7685_2937 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D JCM7685_2938 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JCM7685_2939 flgL; flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D pAMV3p0552 flaA; Flagellin protein FlaA K02406 fliC; flagellin
D JCM7685_2884 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D JCM7685_2936 motB; Flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JCM7685_1770 flagellar motor protein K02557 motB; chemotaxis protein MotB
D pAMV3p0553 flaF; flagellar biosynthesis regulatory protein FlaF K06602 flaF; flagellar biosynthesis activator protein FlaF
D pAMV3p0554 flbT; flagellar biosynthesis repressor FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT
D pAMV3p0152 papD; P pilus assembly protein, chaperone PapD K07346 fimC; fimbrial chaperone protein
D pAMV3p0153 papC; P pilus assembly protein, porin PapC K07347 fimD; outer membrane usher protein
D pAMV3p0154 spore coat protein u K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D pAMV3p0151 spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pamn04812]
D JCM7685_1832 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JCM7685_1122 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JCM7685_1121 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D pAMV1p0078 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D pAMV1p0077 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D pAMV1p0076 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D JCM7685_2142 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D JCM7685_0211 parA; Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D pAMV1p0002 parA; cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D JCM7685_1741 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D pAMV3p0001 parB; partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_0210 parB1; Chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_0280 parB5; ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D pAMV1p0003 parB; parB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_0036 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JCM7685_2419 ParB domain-containing protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pamn04147]
D JCM7685_1856 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JCM7685_0694 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JCM7685_1144 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JCM7685_1217 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JCM7685_0474 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JCM7685_1743 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D JCM7685_1548 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JCM7685_0664 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JCM7685_2100 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JCM7685_2515 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JCM7685_0586 elongation factor Tu K02358 tuf; elongation factor Tu
D JCM7685_0608 elongation factor Tu K02358 tuf; elongation factor Tu
D JCM7685_2925 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JCM7685_2038 diadenosine tetraphosphate K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D pAMV3p0264 membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D pAMV3p0028 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JCM7685_2904 bktB; Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_1051 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0029 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_2399 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D pAMV3p0648 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_0786 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JCM7685_2924 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JCM7685_2701 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JCM7685_2188 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JCM7685_0790 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JCM7685_0714 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JCM7685_2392 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D pAMV3p0033 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JCM7685_1167 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D pAMV3p0102 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JCM7685_1149 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1494 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1794 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JCM7685_1924 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JCM7685_0830 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D pAMV3p0052 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JCM7685_2668 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JCM7685_2954 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D pAMV3p0452 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2492 lpd1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_2556 lpd3; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JCM7685_0420 etfA; electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D pAMV3p0190 etfA; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D JCM7685_1370 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JCM7685_2102 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JCM7685_1289 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:pamn02048]
D JCM7685_2863 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D JCM7685_2862 cas2; Cas2 family CRISPR-associated protein K09951 cas2; CRISPR-associated protein Cas2
D JCM7685_2868 cas3; CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D JCM7685_2864 cas4; CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D JCM7685_2866 cas8; Csd1 family CRISPR-associated protein K19117 csd1; CRISPR-associated protein Csd1
D JCM7685_2865 cas7; Cas7 family CRISPR-associated protein K19118 csd2; CRISPR-associated protein Csd2
D JCM7685_2867 cas5; Cas5 family CRISPR-associated protein K19119 cas5d; CRISPR-associated protein Cas5d
D JCM7685_2258 type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D JCM7685_2257 N-6 adenine-specific DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D JCM7685_2587 methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72]
D JCM7685_1423 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JCM7685_0776 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JCM7685_1316 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D JCM7685_1402 ATPase AAA K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D JCM7685_1401 McrBC 5-methylcytosine restriction system component K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D JCM7685_2784 Mrr restriction system protein K07448 mrr; restriction system protein
D JCM7685_1452 CopG/Arc/MetJ family transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4
D JCM7685_2404 XRE family transcriptional regulator K21498 higA-1; antitoxin HigA-1
D JCM7685_0025 PilT domain-containing protein K19686 vapC; ribonuclease VapC [EC:3.1.-.-]
D JCM7685_1122 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JCM7685_1832 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D JCM7685_0425 DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JCM7685_1338 DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JCM7685_1509 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JCM7685_2303 gltX3; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JCM7685_1954 hypothetical protein K09159 cptB; antitoxin CptB
D JCM7685_1709 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:pamn01504]
D JCM7685_0769 aminoglycoside N(6')-acetyltransferase K00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82]
D JCM7685_0590 chloramphenicol O-acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D pAMV3p0132 smvA; Methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D JCM7685_0056 putative membrane protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D JCM7685_2157 RND family efflux transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D JCM7685_2958 acrA; RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D pAMV3p0544 acrA; Acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D pAMV1p0022 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JCM7685_2158 mexB; multidrug resistance protein MexB K18138 acrB; multidrug efflux pump
D JCM7685_2959 acrD; putative aminoglycoside efflux pump K18138 acrB; multidrug efflux pump
D pAMV3p0543 acrB; Acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D pAMV1p0023 acrB; RND efflux system, inner membrane transporter K18138 acrB; multidrug efflux pump
D JCM7685_2965 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:pamn00536]
D pAMV1p0066 outer membrane autotransporter barrel domain protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pamn00537]
D pAMV3p0052 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JCM7685_1743 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pamn03100]
D JCM7685_2462 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D pAMV3p0645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JCM7685_0973 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JCM7685_0153 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JCM7685_2809 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JCM7685_1701 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JCM7685_0837 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JCM7685_2206 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JCM7685_3048 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JCM7685_2318 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JCM7685_1319 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JCM7685_1227 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JCM7685_1226 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JCM7685_2855 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JCM7685_1627 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JCM7685_2072 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JCM7685_2853 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JCM7685_2571 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JCM7685_2155 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JCM7685_1528 tRNA-His K14226 tRNA-His; tRNA His
D JCM7685_2463 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D pAMV3p0646 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JCM7685_0154 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JCM7685_1894 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JCM7685_2080 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JCM7685_1152 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JCM7685_0707 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JCM7685_2791 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JCM7685_0150 tRNA-Met K14230 tRNA-Met; tRNA Met
D JCM7685_0681 tRNA-Met K14230 tRNA-Met; tRNA Met
D JCM7685_2459 tRNA-Met K14230 tRNA-Met; tRNA Met
D pAMV3p0642 tRNA-Met K14230 tRNA-Met; tRNA Met
D JCM7685_2278 tRNA-Met K14230 tRNA-Met; tRNA Met
D JCM7685_1532 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JCM7685_0612 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JCM7685_2048 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JCM7685_2326 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JCM7685_0230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JCM7685_1678 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JCM7685_2263 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JCM7685_1425 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JCM7685_2113 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JCM7685_2000 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JCM7685_0819 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JCM7685_0592 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JCM7685_1906 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JCM7685_0166 tRNA-Val K14237 tRNA-Val; tRNA Val
D JCM7685_1457 tRNA-Val K14237 tRNA-Val; tRNA Val
D JCM7685_1621 tRNA-Val K14237 tRNA-Val; tRNA Val
D JCM7685_0226 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D JCM7685_0155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JCM7685_2464 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D pAMV3p0647 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JCM7685_0152 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JCM7685_2461 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D pAMV3p0644 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JCM7685_0151 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JCM7685_2460 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D pAMV3p0643 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D pAMV3p0253 lcdH; L-carnitine dehydrogenase K27497 K27497; carnitine 3-dehydrogenase / betainyl-CoA thioesterase [EC:1.1.1.108 3.1.2.33]
D JCM7685_2946 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D JCM7685_2825 pqqC; coenzyme PQQ synthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D pAMV1p0092 stcD; N-metylproline demethylase, stachydrine utilization protein K22551 hpbA; N-methyl-L-proline demethylase [EC:1.5.3.-]
D JCM7685_2761 electron-transferring-flavoproteindehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D JCM7685_3031 qor; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JCM7685_1297 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JCM7685_0493 alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JCM7685_0498 msrA; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D JCM7685_1244 peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D JCM7685_0487 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D JCM7685_0978 glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D JCM7685_0157 yedY; Sulfoxide reductase catalytic subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D JCM7685_2296 cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D JCM7685_1309 peroxiredoxin K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JCM7685_2994 ahpC; peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JCM7685_1194 peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D pAMV3p0245 iron-dependent peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D pAMV3p0617 Dyp-type peroxidase, partial K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D pAMV1p0152 putative nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D pAMV1p0118 dmmC; putative dimethylamine monooxygenase subunit C K22342 dmmA; dimethylamine monooxygenase subunit A [EC:1.14.13.238]
D pAMV1p0117 dmmB; putative dimethylamine monooxygenase subunit B K22343 dmmB; dimethylamine monooxygenase subunit B [EC:1.14.13.238]
D pAMV1p0116 dmmA; putative dimethylamine monooxygenase subunit A K22344 dmmC; dimethylamine monooxygenase subunit C [EC:1.14.13.238]
D JCM7685_0217 Rieske (2Fe-2S) domain-containing protein K24003 stc2; stachydrine N-demethylase [EC:1.14.13.247]
D pAMV3p0537 Multicopper oxidase K22349 mnxG; manganese oxidase [EC:1.16.3.3]
D JCM7685_0537 fpr; ferredoxin-NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JCM7685_0479 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D pAMV3p0341 arsC; Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D JCM7685_2823 pqqE; coenzyme PQQ synthesis protein E K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D JCM7685_2964 pcm1; protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D JCM7685_2968 pcm3; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D JCM7685_2854 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D JCM7685_2841 RNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D JCM7685_2016 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D JCM7685_2066 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D JCM7685_1097 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D JCM7685_1594 GCN5-related N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D JCM7685_2207 acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D JCM7685_1638 fabB1; 3-oxoacyl-(acyl-carrier-protein) synthase II K14660 nodE; nodulation protein E [EC:2.3.1.-]
D JCM7685_1576 GNAT family acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D JCM7685_1807 leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D JCM7685_0940 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D JCM7685_1098 hypothetical protein K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D JCM7685_1245 hemolysin K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D JCM7685_0893 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D pAMV3p0225 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D JCM7685_2247 thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D pAMV1p0030 nosX; accesory protein NosX K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D JCM7685_0941 glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D JCM7685_1854 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D JCM7685_2172 appr-1-p processing domain-containing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D JCM7685_0856 fluoroacetyl-CoA thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D JCM7685_0544 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D JCM7685_2306 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D pAMV3p0463 betC; Choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D JCM7685_0958 TatD DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JCM7685_0029 nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D JCM7685_1185 alpha/beta hydrolase fold protein K01175 ybfF; esterase [EC:3.1.-.-]
D JCM7685_0144 Phage-related lysozyme (muraminidase) K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D JCM7685_0272 Phage-related lysozyme (muraminidase) K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D JCM7685_2023 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D JCM7685_2528 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JCM7685_0523 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JCM7685_0525 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JCM7685_0526 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JCM7685_0323 amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D pAMV3p0275 hydroxydechloroatrazine ethylaminohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D JCM7685_1472 hydroxyatrazine ethylaminohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D JCM7685_2128 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D pAMV1p0102 putative magnesium chelatase, ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JCM7685_1474 alanine racemase K18425 dhaa; 3-hydroxy-D-aspartate aldolase [EC:4.1.3.41]
D JCM7685_1151 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D JCM7685_2130 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D pAMV1p0109 gmaS; glutamate-methylamine ligase, gamma-glutamylmethylamide synthetase K01949 gmaS; glutamate---methylamine ligase [EC:6.3.4.12]
D JCM7685_2025 Cu2+-exporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D pAMV3p0466 Heavy metal-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D JCM7685_2248 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D JCM7685_3020 torT; TMAO reductase system periplasmic protein TorT K11930 torT; periplasmic protein TorT
C 99982 Energy metabolism
D JCM7685_1066 fdhD; formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D JCM7685_1639 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D JCM7685_3035 ferredoxin K05337 fer; ferredoxin
D JCM7685_1348 ferredoxin K05524 fdxA; ferredoxin
D pAMV1p0149 norD; nitric oxide reductase D protein K02448 norD; nitric oxide reductase NorD protein
D pAMV1p0148 norQ; nitric oxide reductase Q protein, ATPase AAA K04748 norQ; nitric oxide reductase NorQ protein
D JCM7685_0421 etfB; electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D pAMV3p0191 etfB; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D pAMV3p0221 nirC; cytochrome c, nitrite reductase associated (NirC) K19344 nirC; cytochrome c55X
D pAMV3p0220 nirF; cytochrome d1, heme region, protein nirF K19345 nirF; protein NirF
D JCM7685_0218 ferredoxin K24004 stc4; stachydrine N-demethylase, reductase component
C 99983 Lipid metabolism
D pAMV1p0089 aidB; alkylation response protein AidB, putative acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D pAMV3p0261 nrdI; ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D JCM7685_0932 hypothetical protein K06203 cysZ; CysZ protein
D JCM7685_1462 ethanolamine utilisation protein, EutH K04023 eutH; ethanolamine transporter
D JCM7685_3000 pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein
D pAMV3p0104 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D JCM7685_0969 hypothetical protein K21687 rpfA; resuscitation-promoting factor RpfA
C 99987 Cofactor metabolism
D JCM7685_0439 cobW; CobW K02234 cobW; cobalamin biosynthesis protein CobW
D JCM7685_0818 HemY domain-containing protein K02498 hemY; HemY protein
D pAMV3p0216 nirJ; nitrite reductase heme biosynthesis J protein K24868 nirJ; heme d1 biosynthesis protein
D JCM7685_1094 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D pAMV3p0228 hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D JCM7685_0492 hypothetical protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D JCM7685_1436 cyclase/dehydrase K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
D pAMV1p0028 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D JCM7685_1867 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D pAMV3p0267 glyoxalase K15975 K15975; glyoxalase family protein
D JCM7685_1110 putative membrane protein K15977 K15977; putative oxidoreductase
D JCM7685_1285 membrane protein K15977 K15977; putative oxidoreductase
D pAMV3p0270 glyoxalase K06999 K06999; phospholipase/carboxylesterase
D JCM7685_1727 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D JCM7685_2328 cold shock protein, CspA family K03704 cspA; cold shock protein
D JCM7685_2270 cold shock protein K03704 cspA; cold shock protein
D pAMV1p0020 S1 domain protein (RNA-binding), cold shock protein K03704 cspA; cold shock protein
D JCM7685_1155 RNA-binding S1 domain-containing protein K06959 tex; protein Tex
C 99974 Translation
D JCM7685_2775 exonuclease protein involved in mRNA processing K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D JCM7685_2022 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D JCM7685_2302 tig; trigger factor K03545 tig; trigger factor
D JCM7685_0156 yedZ; sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D JCM7685_0223 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D JCM7685_0508 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D pAMV3p0260 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D JCM7685_1711 competence protein ComM K07391 comM; magnesium chelatase family protein
D JCM7685_2656 proteasome-type protease K07395 K07395; putative proteasome-type protease
D JCM7685_2203 xdhC; xanthine dehydrogenase, accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
D JCM7685_0160 C-terminal part of glutathione transferase K11208 yncG; GST-like protein
C 99976 Replication and repair
D JCM7685_1547 hypothetical protein K07454 K07454; putative restriction endonuclease
D JCM7685_0662 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D JCM7685_1866 DNA recombination, RmuC K09760 rmuC; DNA recombination protein RmuC
D JCM7685_1713 hypothetical protein K07460 yraN; putative endonuclease
D JCM7685_1272 DNA protecting protein DprA K04096 smf; DNA processing protein
D JCM7685_2694 recombination factor protein RarA K07478 ycaJ; putative ATPase
D JCM7685_0846 IS5 family transposase K07481 K07481; transposase, IS5 family
D pAMV3p0556 transposase K07481 K07481; transposase, IS5 family
D JCM7685_2214 putative partial transposase K07483 K07483; transposase
D pAMV3p0516 transposase, truncated K07483 K07483; transposase
D JCM7685_2357 IS3 family transposase K07483 K07483; transposase
D pAMV3p0566 transposase, truncated K07483 K07483; transposase
D JCM7685_1463 IS66 family transposase, partial K07483 K07483; transposase
D JCM7685_2115 IS3 family transposase K07483 K07483; transposase
D JCM7685_1202 IS3 family transposase K07483 K07483; transposase
D JCM7685_1469 IS3 family transposase K07483 K07483; transposase
D JCM7685_0228 IS3 family transposase K07483 K07483; transposase
D JCM7685_1899 IS3 family transposase K07483 K07483; transposase
D JCM7685_1967 IS66 family transposase, partial K07484 K07484; transposase
D pAMV3p0567 isocitrate lyase, truncated K07484 K07484; transposase
D JCM7685_1453 IS66 family transposase, partial K07484 K07484; transposase
D JCM7685_1454 IS66 family transposase, partial K07484 K07484; transposase
D JCM7685_1455 IS66 family transposase, partial K07484 K07484; transposase
D JCM7685_1464 IS66 family transposase, partial K07484 K07484; transposase
D JCM7685_2857 putative transposase K07484 K07484; transposase
D JCM7685_2858 IS66 Orf2 family protein K07484 K07484; transposase
D JCM7685_2215 IS66 family transposase K07484 K07484; transposase
D JCM7685_2216 IS66 family transposase K07484 K07484; transposase
D JCM7685_2625 IS66 family transposase, partial K07484 K07484; transposase
D pAMV3p0517 isocitrate lyase K07484 K07484; transposase
D pAMV3p0518 transposase K07484 K07484; transposase
D JCM7685_0610 IS66 family transposase, partial K07484 K07484; transposase
D JCM7685_2351 IS110 family transposase K07486 K07486; transposase
D pAMV3p0103 transposase K07486 K07486; transposase
D pAMV3p0214 Transposase K07486 K07486; transposase
D JCM7685_2570 IS110 family transposase K07486 K07486; transposase
D JCM7685_1398 integrase core domain-containing protein K07497 K07497; putative transposase
D JCM7685_2051 putative transposase K07497 K07497; putative transposase
D JCM7685_2859 Integrase, catalytic region K07497 K07497; putative transposase
D pAMV1p0091 putative transposase K07497 K07497; putative transposase
D JCM7685_1201 IS3 family transposase K07497 K07497; putative transposase
D JCM7685_1424 hypothetical protein K07497 K07497; putative transposase
D JCM7685_1968 IS3 family transposase K07497 K07497; putative transposase
D JCM7685_2796 hypothetical protein K07497 K07497; putative transposase
D JCM7685_1893 IS3 family transposase K07497 K07497; putative transposase
D JCM7685_2569 IS3 family transposase K07497 K07497; putative transposase
D JCM7685_2325 IS3 family transposase K07497 K07497; putative transposase
D pAMV3p0345 transposase K07497 K07497; putative transposase
D JCM7685_0227 IS3 family transposase K07497 K07497; putative transposase
D JCM7685_0229 IS3 family transposase K07497 K07497; putative transposase
D JCM7685_2623 IS3 family transposase, partial K07497 K07497; putative transposase
D JCM7685_0289 transposase, partial K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D JCM7685_1542 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D JCM7685_0147 choline/carnitine/betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D pAMV3p0339 choline/carnitine/betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D JCM7685_0511 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D JCM7685_0008 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D JCM7685_0009 sodium transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D pAMV3p0199 cytosine/purines/uracil permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D JCM7685_1982 intracellular septation protein K06190 ispZ; intracellular septation protein
D JCM7685_1418 resolvase K06400 spoIVCA; site-specific DNA recombinase
D JCM7685_0290 resolvase, partial K06400 spoIVCA; site-specific DNA recombinase
D JCM7685_2229 resolvase K06400 spoIVCA; site-specific DNA recombinase
D JCM7685_0460 peptidase M23B K22719 envC; murein hydrolase activator
C 99993 Cell motility
D JCM7685_1685 hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D pAMV3p0627 uspA; universal stress protein UspA K14061 uspF; universal stress protein F
D JCM7685_1641 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D pAMV3p0044 hypothetical protein K07168 K07168; CBS domain-containing membrane protein
D JCM7685_1591 phoH; phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D pAMV1p0080 signal transduction protein, cyclic-nucleotide binding protein K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D JCM7685_0773 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D JCM7685_1519 capsule polysaccharide export protein K07265 kpsS; capsular polysaccharide export protein
D JCM7685_1517 capsule polysaccharide export protein K07266 kpsC; capsular polysaccharide export protein
D JCM7685_0923 glycoside hydrolase K07273 acm; lysozyme
D JCM7685_2174 outer membrane protein W K07275 ompW; outer membrane protein
D JCM7685_1525 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D JCM7685_0163 putative membrane protein K07340 ybbJ; inner membrane protein
D JCM7685_2141 RND family efflux transporter MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D JCM7685_2252 RND family efflux transporter MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D JCM7685_1430 permease K11744 tqsA; AI-2 transport protein TqsA
D pAMV3p0313 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB
D JCM7685_1697 cytochrome c-type biogenesis protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D JCM7685_0727 cytochrome c-type biogenesis protein CycH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D JCM7685_1693 cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D JCM7685_1269 phoU; phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D JCM7685_1673 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D pAMV1p0034 nosD; nitrous oxide reductase family maturation protein NosD K07218 nosD; nitrous oxidase accessory protein
D pAMV3p0149 FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
D pAMV3p0286 hemin degrading factor K07225 hmuS; putative hemin transport protein
D pAMV1p0142 nnrS; NnrS protein involved in response to nitric oxide K07234 K07234; uncharacterized protein involved in response to NO
D pAMV3p0231 NnrS dehydrogenase K07234 K07234; uncharacterized protein involved in response to NO
D pAMV1p0031 nosL; copper chaperone NosL K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D JCM7685_1734 membrane protein K03558 cvpA; membrane protein required for colicin V production
D JCM7685_0847 chitinase-like protein K03791 K03791; putative chitinase
D JCM7685_2933 paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D JCM7685_2826 pqqB; coenzyme PQQ synthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D JCM7685_2824 pqqD; coenzyme PQQ synthesis protein D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D JCM7685_0911 export-related chaperone CsaA K06878 K06878; tRNA-binding protein
D JCM7685_2194 globin family protein K06886 glbN; hemoglobin
D JCM7685_0652 globin-like protein K06886 glbN; hemoglobin
D JCM7685_1360 esterase K07001 K07001; NTE family protein
D JCM7685_0573 membrane protein K07001 K07001; NTE family protein
D JCM7685_1730 hydrolase, HAD superfamily K07025 K07025; putative hydrolase of the HAD superfamily
D JCM7685_1199 hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein
D JCM7685_1708 sufB; cysteine desulfurase activator complex subunit SufB K09014 sufB; Fe-S cluster assembly protein SufB
D JCM7685_1705 Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D JCM7685_2387 ribonuclease BN K07058 K07058; membrane protein
D JCM7685_0382 ribonuclease BN K07058 K07058; membrane protein
D JCM7685_0353 exlusion protein FxsA K07113 fxsA; UPF0716 protein FxsA
D JCM7685_1886 sufE; cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D JCM7685_2631 rhodanese-like domain-containing protein K07146 K07146; UPF0176 protein
D pAMV3p0343 arsH; arsenical resistance protein, ArsH K11811 arsH; arsenical resistance protein ArsH
D JCM7685_1205 SlyX protein K03745 slyX; SlyX protein
D JCM7685_2665 CreA family protein K05805 creA; CreA protein
D JCM7685_2934 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D JCM7685_2935 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D JCM7685_0515 hypothetical protein K08990 ycjF; putative membrane protein
D pAMV3p0376 hypothetical protein K09914 K09914; putative lipoprotein
D pAMV3p0297 alkylphosphonate uptake protein K06193 phnA; protein PhnA
C 99997 Function unknown
D pAMV3p0413 ankyrin K06867 K06867; uncharacterized protein
D JCM7685_1392 radical SAM domain-containing protein K06871 K06871; uncharacterized protein
D JCM7685_1296 membrane protein K06890 K06890; uncharacterized protein
D JCM7685_1948 phage baseplate assembly protein W K06903 W; Bacteriophage baseplate protein W
D JCM7685_1935 phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D JCM7685_0516 hypothetical protein K06918 K06918; uncharacterized protein
D JCM7685_2279 ATPase K06923 K06923; uncharacterized protein
D JCM7685_1909 CoA-binding domain-containing protein K06929 K06929; uncharacterized protein
D JCM7685_2352 hypothetical protein K06934 K06934; uncharacterized protein
D JCM7685_0725 hypothetical protein K06938 K06938; uncharacterized protein
D JCM7685_2772 metallo-phosphoesterase K06953 K06953; uncharacterized protein
D pAMV3p0063 tcyP; L-cystine transporter tcyP K06956 K06956; uncharacterized protein
D JCM7685_2982 Acetyltransferase K06975 K06975; uncharacterized protein
D JCM7685_1187 hypothetical protein K06995 K06995; uncharacterized protein
D pAMV3p0109 hypothetical protein K06995 K06995; uncharacterized protein
D pAMV3p0129 hypothetical protein K06995 K06995; uncharacterized protein
D JCM7685_2193 glyoxalase family protein K06996 K06996; uncharacterized protein
D JCM7685_0636 hypothetical protein K06996 K06996; uncharacterized protein
D JCM7685_2477 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D JCM7685_1434 zinc metallopeptidase K07054 K07054; uncharacterized protein
D JCM7685_0216 TRAP-type hypothetial protein K07080 K07080; uncharacterized protein
D JCM7685_0007 TRAP transporter solute receptor TAXI family protein K07080 K07080; uncharacterized protein
D JCM7685_2970 hypothetical protein K07090 K07090; uncharacterized protein
D JCM7685_0467 putative membrane protein K07090 K07090; uncharacterized protein
D JCM7685_1081 hypothetical protein K07090 K07090; uncharacterized protein
D JCM7685_2383 membrane protein K07090 K07090; uncharacterized protein
D JCM7685_0982 putative transporter component K07112 K07112; uncharacterized protein
D JCM7685_0983 hypothetical protein K07112 K07112; uncharacterized protein
D JCM7685_0472 aminopeptidase K07120 K07120; uncharacterized protein
D JCM7685_2361 putative ammonia monooxygenase K07120 K07120; uncharacterized protein
D JCM7685_2874 hypothetical protein K07133 K07133; uncharacterized protein
D JCM7685_2309 MOSC domain protein K07140 K07140; MOSC domain-containing protein
D JCM7685_2834 peptidase S16, lon domain-containing protein K07157 K07157; uncharacterized protein
D JCM7685_2313 hypothetical protein K08998 K08998; uncharacterized protein
D JCM7685_2327 hypothetical protein K09005 K09005; uncharacterized protein
D JCM7685_0944 hypothetical protein K09117 K09117; uncharacterized protein
D JCM7685_0934 hypothetical protein K09131 K09131; uncharacterized protein
D JCM7685_1558 hypothetical protein K09160 K09160; uncharacterized protein
D pAMV3p0408 hypothetical protein K09164 K09164; uncharacterized protein
D JCM7685_1220 hypothetical protein K09768 K09768; uncharacterized protein
D JCM7685_0813 hypothetical protein K09780 K09780; uncharacterized protein
D JCM7685_0919 hypothetical protein K09781 K09781; uncharacterized protein
D JCM7685_0203 putative membrane protein K09790 K09790; uncharacterized protein
D JCM7685_2833 hypothetical protein K09791 K09791; uncharacterized protein
D JCM7685_1539 hypothetical protein K09794 K09794; uncharacterized protein
D JCM7685_0914 putative membrane protein K09799 K09799; uncharacterized protein
D pAMV3p0039 hypothetical protein K09799 K09799; uncharacterized protein
D JCM7685_0843 hypothetical protein K09803 K09803; uncharacterized protein
D JCM7685_2078 hypothetical protein K09807 K09807; uncharacterized protein
D JCM7685_2932 hypothetical protein K09857 K09857; uncharacterized protein
D JCM7685_1533 hypothetical protein K09862 K09862; uncharacterized protein
D JCM7685_2972 hypothetical protein K09919 K09919; uncharacterized protein
D JCM7685_0469 hypothetical protein K09921 K09921; uncharacterized protein
D JCM7685_1139 hypothetical protein K09922 K09922; uncharacterized protein
D JCM7685_1796 hypothetical protein K09928 K09928; uncharacterized protein
D JCM7685_1388 hypothetical protein K09930 K09930; uncharacterized protein
D JCM7685_1544 hypothetical protein K09956 K09956; uncharacterized protein
D JCM7685_2832 hypothetical protein K09959 K09959; uncharacterized protein
D JCM7685_1815 hypothetical protein K09966 K09966; uncharacterized protein
D JCM7685_2533 hypothetical protein K09967 K09967; uncharacterized protein
D JCM7685_1551 hypothetical protein K09973 K09973; uncharacterized protein
D JCM7685_1228 hypothetical protein K09985 K09985; uncharacterized protein
D JCM7685_2129 hypothetical protein K09986 K09986; uncharacterized protein
D JCM7685_0495 hypothetical protein K09987 K09987; uncharacterized protein
D JCM7685_1604 hypothetical protein K09989 K09989; uncharacterized protein
D JCM7685_0316 50S ribosomal protein L7 K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 2, 2024