+D GENES KO #

  KEGG Orthology (KO) - Pyrofollis japonicus

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:pare00010] D PYJP_11170 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D PYJP_19270 fbp; fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D PYJP_19260 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PYJP_03450 phosphorylating glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D PYJP_03440 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PYJP_09290 alkaline phosphatase family protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PYJP_03720 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PYJP_18900 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PYJP_07980 ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PYJP_01320 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_17470 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_01330 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17460 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17490 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D PYJP_01300 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PYJP_01310 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_17480 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_01900 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PYJP_18920 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PYJP_01890 korB; 2-oxoglutarate synthase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PYJP_18930 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PYJP_13030 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PYJP_02980 acetate--CoA ligase family protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PYJP_05730 acdAI; acetate--CoA ligase II subunit alpha K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PYJP_15580 acetate--CoA ligase family protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D PYJP_13570 glmM_2; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PYJP_14890 aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein K11389 gapor; glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) [EC:1.2.7.6] D PYJP_15720 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:pare00020] D PYJP_19620 bifunctional 2-methylcitrate synthase/citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D PYJP_08340 hypothetical protein K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D PYJP_19640 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PYJP_19630 icd; isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PYJP_01900 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PYJP_18920 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PYJP_01890 korB; 2-oxoglutarate synthase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PYJP_18930 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PYJP_01880 2-oxoacid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D PYJP_01910 hypothetical protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D PYJP_07580 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PYJP_07570 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PYJP_16710 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PYJP_16680 hypothetical protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PYJP_16700 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PYJP_16690 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PYJP_16660 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D PYJP_16670 FumA C-terminus/TtdB family hydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D PYJP_15720 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D PYJP_01320 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_17470 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_01330 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17460 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17490 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D PYJP_01300 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PYJP_01310 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_17480 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:pare00030] D PYJP_11170 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D PYJP_11720 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PYJP_11730 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PYJP_13690 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D PYJP_15730 hxlA; 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D PYJP_09750 hxlB; 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D PYJP_03260 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D PYJP_10400 carbohydrate kinase family protein K00852 rbsK; ribokinase [EC:2.7.1.15] D PYJP_07400 glmM_1; phosphoglucosamine mutase K22199 ppm; phosphopentomutase [EC:5.4.2.7] D PYJP_13570 glmM_2; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PYJP_01020 ribose 1,5-bisphosphate isomerase K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29] D PYJP_01030 ribose 1,5-bisphosphate isomerase K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29] D PYJP_01260 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PYJP_18940 SDR family oxidoreductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D PYJP_02890 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PYJP_11280 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PYJP_17540 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PYJP_16460 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PYJP_19270 fbp; fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:pare00040] D PYJP_11790 hypothetical protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D PYJP_05250 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:pare00051] D PYJP_11170 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D PYJP_13570 glmM_2; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PYJP_17100 hypothetical protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D PYJP_05250 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D PYJP_07860 fumarylacetoacetate hydrolase family protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26] D PYJP_19270 fbp; fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D PYJP_19260 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:pare00052] D PYJP_17010 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PYJP_13570 glmM_2; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:pare00500] D PYJP_08010 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D PYJP_05900 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D PYJP_08030 glycoside hydrolase family 57 protein K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1] D PYJP_05890 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D PYJP_13570 glmM_2; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PYJP_11170 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pare00520] D PYJP_03230 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PYJP_02370 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D PYJP_16720 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D PYJP_13570 glmM_2; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PYJP_17010 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PYJP_11170 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D PYJP_17100 hypothetical protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00620 Pyruvate metabolism [PATH:pare00620] D PYJP_13030 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PYJP_01320 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_17470 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_01330 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17460 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17490 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D PYJP_01300 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PYJP_01310 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_17480 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_01900 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PYJP_18920 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PYJP_01890 korB; 2-oxoglutarate synthase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PYJP_18930 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PYJP_18900 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PYJP_04880 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PYJP_07480 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D PYJP_02980 acetate--CoA ligase family protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PYJP_05730 acdAI; acetate--CoA ligase II subunit alpha K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PYJP_15580 acetate--CoA ligase family protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D PYJP_17740 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PYJP_16660 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D PYJP_16670 FumA C-terminus/TtdB family hydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D PYJP_15720 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D PYJP_07980 ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PYJP_01110 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pare00630] D PYJP_13030 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PYJP_19620 bifunctional 2-methylcitrate synthase/citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D PYJP_19640 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PYJP_01110 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PYJP_04860 acyl-CoA carboxylase subunit beta K15036 K15036; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15] D PYJP_10180 glcD; glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D PYJP_04440 gyaR; glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D PYJP_01700 phosphoglycolate phosphatase K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18] D PYJP_07970 rbcL; type III ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D PYJP_09180 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PYJP_09880 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PYJP_10430 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D PYJP_10420 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D PYJP_10780 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PYJP_06970 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D PYJP_16460 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PYJP_00650 molybdopterin-dependent oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D PYJP_00660 hypothetical protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit C 00640 Propanoate metabolism [PATH:pare00640] D PYJP_13030 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PYJP_02980 acetate--CoA ligase family protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PYJP_05730 acdAI; acetate--CoA ligase II subunit alpha K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PYJP_15580 acetate--CoA ligase family protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D PYJP_01320 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_17470 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_01330 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17460 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17490 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D PYJP_01300 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PYJP_01310 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_17480 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_04880 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PYJP_04860 acyl-CoA carboxylase subunit beta K15036 K15036; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15] D PYJP_04300 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PYJP_07570 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PYJP_07580 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:pare00650] D PYJP_01110 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PYJP_12120 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1] D PYJP_16710 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PYJP_16680 hypothetical protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PYJP_16700 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PYJP_16690 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PYJP_04300 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PYJP_01320 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_17470 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_01330 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17460 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17490 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D PYJP_01300 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PYJP_01310 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_17480 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_01900 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PYJP_18920 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PYJP_01890 korB; 2-oxoglutarate synthase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PYJP_18930 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PYJP_01100 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00660 C5-Branched dibasic acid metabolism [PATH:pare00660] D PYJP_07570 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PYJP_07580 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PYJP_08350 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PYJP_08360 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] C 00562 Inositol phosphate metabolism [PATH:pare00562] D PYJP_05280 extragenic suppressor protein suhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PYJP_00840 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D PYJP_15560 hypothetical protein K07281 ipct; 1L-myo-inositol 1-phosphate cytidylyltransferase [EC:2.7.7.74] D PYJP_15570 hypothetical protein K07291 dipps; CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.8.34] D PYJP_19260 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:pare00190] D PYJP_06980 hypothetical protein K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D PYJP_17360 hypothetical protein K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D PYJP_06990 hypothetical protein K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D PYJP_17350 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D PYJP_07000 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D PYJP_17340 hypothetical protein K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D PYJP_07020 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D PYJP_07030 nuoH_1; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D PYJP_17320 nuoH_2; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D PYJP_07040 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D PYJP_17310 hypothetical protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D PYJP_07050 hypothetical protein K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D PYJP_07060 hypothetical protein K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D PYJP_07080 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D PYJP_17280 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D PYJP_07070 hypothetical protein K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D PYJP_17260 hypothetical protein K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D PYJP_07090 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D PYJP_17270 hypothetical protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D PYJP_17300 hypothetical protein K05578 ndhG; NAD(P)H-quinone oxidoreductase subunit 6 [EC:7.1.1.2] D PYJP_11270 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D PYJP_16710 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PYJP_16680 hypothetical protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PYJP_16700 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PYJP_16690 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PYJP_09340 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PYJP_05070 ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D PYJP_05080 ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D PYJP_05090 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D PYJP_05060 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D PYJP_05050 hypothetical protein K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D PYJP_05040 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D PYJP_05110 hypothetical protein K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D PYJP_04370 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes [PATH:pare00720] D PYJP_01320 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_17470 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_01330 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17460 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17490 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D PYJP_01300 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PYJP_01310 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_17480 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_07980 ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PYJP_16660 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D PYJP_16670 FumA C-terminus/TtdB family hydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D PYJP_16710 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PYJP_16680 hypothetical protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PYJP_16700 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PYJP_16690 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PYJP_07580 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PYJP_07570 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PYJP_01110 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PYJP_01900 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PYJP_18920 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PYJP_01890 korB; 2-oxoglutarate synthase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PYJP_18930 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PYJP_01880 2-oxoacid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D PYJP_01910 hypothetical protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D PYJP_19630 icd; isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PYJP_19640 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PYJP_04880 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PYJP_04860 acyl-CoA carboxylase subunit beta K15036 K15036; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15] D PYJP_17370 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D PYJP_13030 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:pare00680] D PYJP_00650 molybdopterin-dependent oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D PYJP_00660 hypothetical protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D PYJP_17370 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D PYJP_09880 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PYJP_16460 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PYJP_03720 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PYJP_19270 fbp; fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D PYJP_09750 hxlB; 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D PYJP_15730 hxlA; 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D PYJP_13030 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PYJP_01320 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_17470 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_01330 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17460 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17490 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D PYJP_01300 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PYJP_01310 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_17480 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_07980 ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PYJP_09290 alkaline phosphatase family protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PYJP_07780 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PYJP_20320 HAD family phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D PYJP_10760 coenzyme F420-0:L-glutamate ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] D PYJP_08370 aksF; homoisocitrate dehydrogenase K10978 aksF; methanogen homoisocitrate dehydrogenase [EC:1.1.1.87 1.1.1.-] D PYJP_07890 hypothetical protein K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00910 Nitrogen metabolism [PATH:pare00910] D PYJP_05430 hypothetical protein K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D PYJP_04430 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D PYJP_09180 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PYJP_00830 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PYJP_00270 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:pare00920] D PYJP_00420 hypothetical protein K15552 tauC; taurine transport system permease protein D PYJP_00430 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D PYJP_08450 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D PYJP_08430 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D PYJP_16910 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PYJP_16970 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D PYJP_05610 phosphoadenosine phosphosulfate reductase family protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D PYJP_02280 FAD/NAD(P)-binding oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D PYJP_16610 FAD/NAD(P)-binding oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D PYJP_19910 nrfD_3; polysulfide reductase NrfD K17221 sreC; sulfur reductase membrane anchor D PYJP_15860 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D PYJP_17710 cystathionine gamma-synthase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:pare00061] D PYJP_04880 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PYJP_08040 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYJP_12550 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYJP_12860 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYJP_02830 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYJP_02850 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYJP_06490 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:pare00071] D PYJP_01110 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PYJP_02830 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYJP_02850 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYJP_06490 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:pare00561] D PYJP_16460 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PYJP_19110 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] C 00564 Glycerophospholipid metabolism [PATH:pare00564] D PYJP_14400 hypothetical protein K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D PYJP_10950 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PYJP_14370 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PYJP_19080 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PYJP_14040 NAD(P)-dependent glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D PYJP_15200 UbiA family prenyltransferase K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42] D PYJP_14570 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:pare00230] D PYJP_06840 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PYJP_07610 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PYJP_07400 glmM_1; phosphoglucosamine mutase K22199 ppm; phosphopentomutase [EC:5.4.2.7] D PYJP_13570 glmM_2; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PYJP_01260 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PYJP_13160 phosphoribosyltransferase family protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PYJP_13550 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PYJP_20170 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PYJP_18540 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PYJP_19520 yjjX; inosine/xanthosine triphosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D PYJP_19820 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D PYJP_02880 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PYJP_13520 hypothetical protein K26212 K26212; guanosine phosphorylase [EC:2.4.2.15] D PYJP_04510 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PYJP_01650 cyaB; class IV adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D PYJP_20540 AMP phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57] D PYJP_08640 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PYJP_19340 hypothetical protein K18532 AK6; adenylate kinase [EC:2.7.4.3] D PYJP_03820 NTPase K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D PYJP_03180 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D PYJP_16970 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D PYJP_16910 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PYJP_00270 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:pare00240] D PYJP_17620 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PYJP_17630 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PYJP_07420 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PYJP_07430 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D PYJP_07450 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D PYJP_05870 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D PYJP_07440 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D PYJP_07410 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D PYJP_05880 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D PYJP_02390 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D PYJP_18540 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PYJP_15850 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D PYJP_08610 AAA family ATPase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D PYJP_13550 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PYJP_16020 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D PYJP_02940 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D PYJP_20540 AMP phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57] D PYJP_10810 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D PYJP_04900 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D PYJP_04510 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PYJP_20230 hypothetical protein K00943 tmk; dTMP kinase [EC:2.7.4.9] D PYJP_04470 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PYJP_04520 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:pare00250] D PYJP_16820 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PYJP_20210 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PYJP_17650 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PYJP_17640 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PYJP_07420 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PYJP_07430 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D PYJP_04300 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PYJP_00830 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PYJP_04430 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D PYJP_09180 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PYJP_17620 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PYJP_17630 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PYJP_03230 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:pare00260] D PYJP_17680 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PYJP_17670 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PYJP_17690 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PYJP_17720 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D PYJP_00080 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PYJP_17700 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PYJP_09880 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PYJP_16460 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PYJP_09290 alkaline phosphatase family protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PYJP_07780 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PYJP_20320 HAD family phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D PYJP_10430 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D PYJP_10420 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D PYJP_10780 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PYJP_06970 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D PYJP_05380 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PYJP_06820 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:pare00270] D PYJP_15860 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D PYJP_17110 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PYJP_17450 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PYJP_16140 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PYJP_10130 speD_1; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PYJP_13530 speD_2; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PYJP_15530 speE_1; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D PYJP_18800 speE_2; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D PYJP_03610 purine-nucleoside phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D PYJP_15170 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D PYJP_04670 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PYJP_04640 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PYJP_08180 hypothetical protein K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PYJP_17680 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PYJP_17670 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PYJP_17690 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PYJP_17710 cystathionine gamma-synthase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D PYJP_16820 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PYJP_07780 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:pare00280] D PYJP_01300 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PYJP_04860 acyl-CoA carboxylase subunit beta K15036 K15036; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15] D PYJP_18550 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D PYJP_01110 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PYJP_01100 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pare00290] D PYJP_05380 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PYJP_08350 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PYJP_08360 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] C 00300 Lysine biosynthesis [PATH:pare00300] D PYJP_17690 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PYJP_17680 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PYJP_17670 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PYJP_01950 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PYJP_15760 M20 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PYJP_08370 aksF; homoisocitrate dehydrogenase K10978 aksF; methanogen homoisocitrate dehydrogenase [EC:1.1.1.87 1.1.1.-] D PYJP_20010 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D PYJP_07920 lysW_argW; alpha-aminoadipate/glutamate carrier protein LysW/ArgW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D PYJP_07930 lysX_2; lysine biosynthesis protein LysX K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43] D PYJP_07900 [LysW]-aminoadipate/[LysW]-glutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D PYJP_07910 argC; N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D PYJP_07940 aspartate aminotransferase family protein K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D PYJP_07950 M20/M25/M40 family metallo-hydrolase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] C 00310 Lysine degradation [PATH:pare00310] D PYJP_01110 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PYJP_16420 KamA family radical SAM protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] C 00220 Arginine biosynthesis [PATH:pare00220] D PYJP_09360 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D PYJP_17650 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PYJP_17640 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PYJP_09180 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PYJP_17620 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PYJP_17630 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PYJP_00270 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D PYJP_04430 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D PYJP_16820 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PYJP_07920 lysW_argW; alpha-aminoadipate/glutamate carrier protein LysW/ArgW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D PYJP_02380 lysX_1; lysine biosynthesis protein LysX K19412 argX; glutamate---[amino group carrier protein] ligase [EC:6.3.2.60] D PYJP_07900 [LysW]-aminoadipate/[LysW]-glutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D PYJP_07910 argC; N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D PYJP_07940 aspartate aminotransferase family protein K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D PYJP_07950 M20/M25/M40 family metallo-hydrolase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] C 00330 Arginine and proline metabolism [PATH:pare00330] D PYJP_02310 hypothetical protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D PYJP_05140 hypothetical protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D PYJP_18430 hypothetical protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D PYJP_12060 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D PYJP_12050 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D PYJP_15470 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D PYJP_15530 speE_1; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D PYJP_18800 speE_2; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D PYJP_10130 speD_1; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PYJP_13530 speD_2; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PYJP_05970 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D PYJP_16820 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:pare00340] D PYJP_13140 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D PYJP_13090 hisE; phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D PYJP_13130 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) me thylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D PYJP_13080 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D PYJP_13110 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D PYJP_13150 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PYJP_13100 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:pare00350] D PYJP_16820 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PYJP_13150 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PYJP_07890 hypothetical protein K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00360 Phenylalanine metabolism [PATH:pare00360] D PYJP_00200 phenylacetate--CoA ligase family protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D PYJP_16820 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PYJP_13150 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism D PYJP_01110 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pare00400] D PYJP_11740 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PYJP_11750 3-dehydroquinate synthase family protein K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D PYJP_11760 hypothetical protein K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D PYJP_11770 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D PYJP_11650 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D PYJP_11660 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D PYJP_11670 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D PYJP_06820 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PYJP_11710 chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D PYJP_11700 hypothetical protein K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D PYJP_16820 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PYJP_13150 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:pare00410] D PYJP_07890 hypothetical protein K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] D PYJP_04300 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PYJP_20620 4-phosphopantoate--beta-alanine ligase K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] C 00430 Taurine and hypotaurine metabolism D PYJP_01220 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:pare00450] D PYJP_17710 cystathionine gamma-synthase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D PYJP_17110 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PYJP_17450 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PYJP_06940 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D PYJP_16910 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PYJP_10390 metG_1; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:pare00460] D PYJP_01220 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PYJP_20210 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PYJP_09880 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:pare00470] D PYJP_11630 DUF1611 domain-containing protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312] D PYJP_01400 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] C 00480 Glutathione metabolism [PATH:pare00480] D PYJP_01220 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PYJP_00740 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PYJP_19630 icd; isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PYJP_15530 speE_1; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D PYJP_18800 speE_2; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:pare00730] D PYJP_18410 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PYJP_05270 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D PYJP_03820 NTPase K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D PYJP_08640 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:pare00740] D PYJP_18480 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D PYJP_18470 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D PYJP_18450 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D PYJP_18460 ribC; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D PYJP_01690 hypothetical protein K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161] D PYJP_16340 DUF357 domain-containing protein K14656 ribL; FAD synthetase [EC:2.7.7.2] D PYJP_06840 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PYJP_07610 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PYJP_15380 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism D PYJP_00080 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PYJP_17700 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:pare00760] D PYJP_08320 aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D PYJP_08300 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D PYJP_08310 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D PYJP_10490 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D PYJP_13550 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PYJP_09460 nicotinamide-nucleotide adenylyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] D PYJP_14100 nicotinamide-nucleotide adenylyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] D PYJP_03500 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D PYJP_14380 cobB; NAD-dependent protein deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D PYJP_13330 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D PYJP_12120 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:pare00770] D PYJP_05710 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D PYJP_05700 ketopantoate reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D PYJP_19540 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D PYJP_18030 hypothetical protein K06982 pok; pantoate kinase [EC:2.7.1.169] D PYJP_20620 4-phosphopantoate--beta-alanine ligase K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] D PYJP_18040 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D PYJP_19770 hypothetical protein K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237] D PYJP_07890 hypothetical protein K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00780 Biotin metabolism [PATH:pare00780] D PYJP_08040 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYJP_12550 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYJP_12860 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYJP_04890 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:pare00785] D PYJP_11510 hypothetical protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D PYJP_11520 hypothetical protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D PYJP_10430 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D PYJP_10420 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D PYJP_10780 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PYJP_06970 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:pare00790] D PYJP_04360 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D PYJP_12930 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D PYJP_04480 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PYJP_06440 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PYJP_06450 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PYJP_16840 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PYJP_05780 hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D PYJP_15110 hypothetical protein K17487 mptB; 7,8-dihydroneopterin 2',3'-cyclic phosphate phosphodiesterase [EC:3.1.4.56] D PYJP_03360 DUF115 domain-containing protein K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D PYJP_20570 beta-ribofuranosylaminobenzene 5'-phosphate synthase K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54] D PYJP_00030 7,8-dihydropterin-6-methyl-4-(beta-D-ribofuranosy l)-aminobenzene-5'-phosphate synthase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D PYJP_00900 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D PYJP_19600 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D PYJP_15150 RimK family alpha-L-glutamate ligase K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33] D PYJP_09330 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PYJP_03760 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PYJP_11620 hypothetical protein K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12] D PYJP_01060 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D PYJP_12200 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:pare00670] D PYJP_09880 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PYJP_10780 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PYJP_04520 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D PYJP_15330 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:pare00860] D PYJP_18610 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PYJP_12220 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D PYJP_02470 hemL_1; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D PYJP_10720 hemL_2; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D PYJP_18970 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PYJP_10730 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D PYJP_10750 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D PYJP_10740 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D PYJP_07320 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D PYJP_15320 radical SAM protein K22226 ahbC; Fe-coproporphyrin III synthase D PYJP_15300 TIGR04053 family radical SAM/SPASM domain-containing protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D PYJP_09340 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PYJP_01560 hypothetical protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PYJP_03070 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pare00130] D PYJP_08410 ubiA; putative 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D PYJP_08420 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D PYJP_15380 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PYJP_15370 hypothetical protein K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D PYJP_11240 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:pare00900] D PYJP_01110 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PYJP_01100 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D PYJP_01130 hmgA; hydroxymethylglutaryl-CoA reductase (NADPH) K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D PYJP_04260 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D PYJP_18650 isopentenyl phosphate kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26] D PYJP_14520 aconitase X K25517 acnX1; phosphomecalonate degydratase large subunit [EC:4.2.1.182] D PYJP_14510 hypothetical protein K09128 acnX2; phosphomecalonate degydratase small subunit [EC:4.2.1.182] D PYJP_14530 UbiD family decarboxylase K25518 E4.1.1.126; anhydromevalonate phosphate decarboxylase [EC:4.1.1.126] D PYJP_15380 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PYJP_18640 fni; type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D PYJP_18630 gds; geranylgeranyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D PYJP_13650 uppS; polyprenyl diphosphate synthase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D PYJP_11720 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PYJP_11730 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D PYJP_03240 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PYJP_02370 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:pare00261] D PYJP_16910 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PYJP_17680 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PYJP_17670 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:pare00521] D PYJP_13570 glmM_2; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PYJP_00840 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D PYJP_05280 extragenic suppressor protein suhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PYJP_03240 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PYJP_02370 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis D PYJP_03240 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PYJP_02370 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] C 00401 Novobiocin biosynthesis [PATH:pare00401] D PYJP_11710 chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D PYJP_16820 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PYJP_13150 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D PYJP_08040 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYJP_12550 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYJP_12860 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites [PATH:pare00999] D PYJP_16140 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PYJP_11770 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D PYJP_01110 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:pare00627] D PYJP_07480 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D PYJP_15380 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:pare00633] D PYJP_17920 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D PYJP_17940 hyaluronate lyase K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D PYJP_17370 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D PYJP_01320 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_17470 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D PYJP_01330 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17460 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D PYJP_17490 porC; pyruvate synthase subunit PorC K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D PYJP_01300 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D PYJP_01310 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D PYJP_17480 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:pare03020] D PYJP_13980 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D PYJP_13970 rpoA1; DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D PYJP_13960 rpoA2; DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D PYJP_18730 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D PYJP_14670 hypothetical protein K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D PYJP_19750 DNA-directed RNA polymerase K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D PYJP_19410 hypothetical protein K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6] D PYJP_13990 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D PYJP_03660 hypothetical protein K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D PYJP_18690 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D PYJP_15480 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] C 03022 Basal transcription factors [PATH:pare03022] D PYJP_04010 transcription initiation factor IIB family protein K03124 TFIIB; transcription initiation factor TFIIB D PYJP_15500 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D PYJP_19560 transcription initiation factor IIB family protein K03124 TFIIB; transcription initiation factor TFIIB D PYJP_03480 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D PYJP_04680 transcription factor K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D PYJP_16300 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:pare03010] D PYJP_18680 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PYJP_08810 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PYJP_18750 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PYJP_08680 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PYJP_13910 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PYJP_08730 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PYJP_18700 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PYJP_13890 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PYJP_18740 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PYJP_13930 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PYJP_19830 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PYJP_08780 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PYJP_08930 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PYJP_19860 30S ribosomal protein S3ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D PYJP_08750 30S ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e D PYJP_19720 30S ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D PYJP_19510 30S ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D PYJP_19320 hypothetical protein K02962 RP-S17e; small subunit ribosomal protein S17e D PYJP_14190 30S ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D PYJP_19780 hypothetical protein K02974 RP-S24e; small subunit ribosomal protein S24e D PYJP_10330 hypothetical protein K02975 RP-S25e; small subunit ribosomal protein S25e D PYJP_05160 30S ribosomal protein S26e K02976 RP-S26e; small subunit ribosomal protein S26e D PYJP_14590 30S ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e D PYJP_19790 hypothetical protein K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D PYJP_18580 30S ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D PYJP_03540 hypothetical protein K02983 RP-S30e; small subunit ribosomal protein S30e D PYJP_14300 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PYJP_08940 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PYJP_08850 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PYJP_08740 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PYJP_08720 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PYJP_14310 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PYJP_14290 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PYJP_20200 rpl12p; 50S ribosomal protein P1 K02869 RP-L12; large subunit ribosomal protein L12 D PYJP_18710 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PYJP_08770 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PYJP_08660 uL15 family ribosomal protein K02876 RP-L15; large subunit ribosomal protein L15 D PYJP_08690 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PYJP_08820 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PYJP_08830 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PYJP_08760 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PYJP_08800 hypothetical protein K02904 RP-L29; large subunit ribosomal protein L29 D PYJP_08670 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PYJP_08840 rpl4p; 50S ribosomal protein L4 K02930 RP-L4e; large subunit ribosomal protein L4e D PYJP_18600 rpl7ae; 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D PYJP_14720 50S ribosomal protein L16 K02866 RP-L10e; large subunit ribosomal protein L10e D PYJP_15950 hypothetical protein K02873 RP-L13e; large subunit ribosomal protein L13e D PYJP_08600 50S ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e D PYJP_18520 50S ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D PYJP_18720 50S ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D PYJP_08700 50S ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D PYJP_14790 50S ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D PYJP_18570 50S ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e D PYJP_13950 50S ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e D PYJP_14220 50S ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D PYJP_08710 50S ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D PYJP_08620 50S ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e D PYJP_04290 hypothetical protein K02917 RP-L35Ae; large subunit ribosomal protein L35Ae D PYJP_18330 50S ribosomal protein L37ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D PYJP_19610 hypothetical protein K02923 RP-L38e; large subunit ribosomal protein L38e D PYJP_14210 hypothetical protein K02924 RP-L39e; large subunit ribosomal protein L39e D PYJP_18260 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D PYJP_14600 50S ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e D PYJP_14240 hypothetical protein K02944 RP-LX; large subunit ribosomal protein LX D PYJP_r00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:pare00970] D PYJP_18610 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PYJP_17790 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PYJP_10800 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D PYJP_10530 hypothetical protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D PYJP_03550 gatD; Glu-tRNA(Gln) amidotransferase subunit GatD K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] D PYJP_03560 gatE; Glu-tRNA(Gln) amidotransferase subunit GatE K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] D PYJP_14320 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PYJP_15290 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D PYJP_17590 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PYJP_15460 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PYJP_03220 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PYJP_09840 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PYJP_09250 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PYJP_10390 metG_1; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PYJP_04240 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PYJP_09760 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PYJP_07600 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PYJP_15510 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D PYJP_10090 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PYJP_05120 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PYJP_03340 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PYJP_03930 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PYJP_03920 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PYJP_03910 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PYJP_10770 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:pare03060] D PYJP_08650 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PYJP_14820 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PYJP_14260 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PYJP_15870 signal recognition particle subunit SRP19/SEC65 family protein K03105 SRP19; signal recognition particle subunit SRP19 D PYJP_02420 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PYJP_07990 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PYJP_07650 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D PYJP_05230 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D PYJP_05220 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D PYJP_03680 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:pare04122] D PYJP_09330 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PYJP_02900 hypothetical protein K03636 moaD; sulfur-carrier protein D PYJP_13710 hypothetical protein K03636 moaD; sulfur-carrier protein D PYJP_16570 MoaD family protein K03636 moaD; sulfur-carrier protein D PYJP_11620 hypothetical protein K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12] D PYJP_18420 ThiF family adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D PYJP_03760 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PYJP_01060 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D PYJP_18410 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PYJP_16000 hypothetical protein K03154 thiS; sulfur carrier protein D PYJP_17840 MoaD/ThiS family protein K03154 thiS; sulfur carrier protein C 03050 Proteasome [PATH:pare03050] D PYJP_04720 proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit D PYJP_18380 psmA; archaeal proteasome endopeptidase complex subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D PYJP_14030 psmB_1; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D PYJP_14060 psmB_2; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:pare03018] D PYJP_14690 exosome complex RNA-binding protein Csl4 K07573 CSL4; exosome complex component CSL4 D PYJP_18360 rrp4; exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4 D PYJP_18340 rrp42; exosome complex protein Rrp42 K12589 RRP42; exosome complex component RRP42 D PYJP_18350 rrp41; exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41 D PYJP_03720 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] B B 09124 Replication and repair C 03030 DNA replication [PATH:pare03030] D PYJP_12960 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PYJP_03900 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D PYJP_10630 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PYJP_03840 DNA polymerase II K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D PYJP_09170 DNA-directed DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D PYJP_03800 minichromosome maintenance protein MCM K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D PYJP_14620 priS; DNA primase small subunit PriS K02683 priS; DNA primase small subunit [EC:2.7.7.102] D PYJP_10310 priL; DNA primase regulatory subunit PriL K18882 priL; DNA primase large subunit D PYJP_09030 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen D PYJP_14630 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen D PYJP_15140 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen D PYJP_03780 replication factor C small subunit K04801 rfcS; replication factor C small subunit D PYJP_03770 replication factor C large subunit K04800 rfcL; replication factor C large subunit D PYJP_13360 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PYJP_19950 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03410 Base excision repair [PATH:pare03410] D PYJP_00180 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PYJP_01010 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PYJP_09030 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen D PYJP_14630 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen D PYJP_15140 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen D PYJP_13360 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PYJP_19950 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D PYJP_12600 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D PYJP_16030 udg; type-4 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PYJP_02490 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] C 03420 Nucleotide excision repair [PATH:pare03420] D PYJP_16300 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D PYJP_19650 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D PYJP_09030 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen D PYJP_14630 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen D PYJP_15140 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen D PYJP_19950 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03430 Mismatch repair [PATH:pare03430] D PYJP_12960 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PYJP_09030 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen D PYJP_14630 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen D PYJP_15140 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen D PYJP_19950 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03440 Homologous recombination D PYJP_12960 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] C 03450 Non-homologous end-joining D PYJP_13360 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 D PYJP_19760 DNA-binding protein K15171 SUPT4H1; transcription elongation factor SPT4 D PYJP_14280 transcription elongation factor Spt5 K15172 SUPT5H; transcription elongation factor SPT5 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:pare02010] D PYJP_07380 wtpA; tungstate ABC transporter substrate-binding protein WtpA K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D PYJP_07370 wtpB; tungstate ABC transporter permease WtpB K15496 wtpB; molybdate/tungstate transport system permease protein D PYJP_00410 hypothetical protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D PYJP_07360 hypothetical protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D PYJP_00420 hypothetical protein K15552 tauC; taurine transport system permease protein D PYJP_00430 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D PYJP_08450 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D PYJP_08430 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D PYJP_16260 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PYJP_20090 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PYJP_16270 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYJP_20100 hypothetical protein K02011 afuB; iron(III) transport system permease protein D PYJP_16280 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PYJP_18160 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D PYJP_12470 ABC transporter permease subunit K02063 thiP; thiamine transport system permease protein D PYJP_10940 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D PYJP_16780 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PYJP_02530 BMP family protein K07335 bmpA; basic membrane protein A and related proteins D PYJP_11570 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D PYJP_02550 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D PYJP_15970 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D PYJP_02560 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D PYJP_15980 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D PYJP_02540 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D PYJP_15960 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D PYJP_02580 extracellular solute-binding protein K17237 inoE; inositol-phosphate transport system substrate-binding protein D PYJP_02590 sugar ABC transporter permease K17238 inoF; inositol-phosphate transport system permease protein D PYJP_02600 carbohydrate ABC transporter permease K17239 inoG; inositol-phosphate transport system permease protein D PYJP_02610 ABC transporter ATP-binding protein K17240 inoK; inositol-phosphate transport system ATP-binding protein D PYJP_05350 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D PYJP_05340 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D PYJP_05330 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D PYJP_05320 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PYJP_04610 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D PYJP_04590 hypothetical protein K17077 artQ; arginine/lysine/histidine transport system permease protein D PYJP_02800 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_06550 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_11330 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_11380 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_12110 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_13250 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_16370 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_02820 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_06540 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_11360 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_11410 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_12100 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_13260 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_02810 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_06530 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_11370 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_11420 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D PYJP_12090 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_13270 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_16410 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_02840 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_06520 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_11340 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_11390 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_12080 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_13280 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_16380 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_02790 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_06510 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_11350 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_11400 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_12070 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_13290 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_16390 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_16400 branched-chain amino acid ABC transporter permease K11956 natD; neutral amino acid transport system permease protein D PYJP_06930 ABC transporter ATP-binding protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:pare03070] D PYJP_08650 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PYJP_14260 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PYJP_14820 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PYJP_07650 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D PYJP_05230 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D PYJP_05220 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:pare02020] D PYJP_05350 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D PYJP_17740 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PYJP_09180 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PYJP_01110 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PYJP_17940 hyaluronate lyase K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D PYJP_17920 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:pare02024] D PYJP_02800 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_06550 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_11330 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_11380 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_12110 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_13250 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_16370 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_02820 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_06540 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_11360 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_11410 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_12100 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_13260 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_02810 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_06530 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_11370 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_11420 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D PYJP_12090 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_13270 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_16410 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_02840 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_06520 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_11340 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_11390 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_12080 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_13280 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_16380 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_02790 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_06510 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_11350 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_11400 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_12070 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_13290 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_16390 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_02830 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYJP_02850 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYJP_06490 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYJP_07690 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PYJP_10850 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PYJP_17390 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PYJP_20510 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PYJP_07700 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D PYJP_10860 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D PYJP_17410 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D PYJP_20490 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D PYJP_07710 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PYJP_10870 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PYJP_17420 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PYJP_20480 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PYJP_07720 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PYJP_08200 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PYJP_20470 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PYJP_10880 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D PYJP_20460 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D PYJP_08650 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PYJP_14260 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PYJP_14820 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D PYJP_03720 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D PYJP_01560 hypothetical protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PYJP_03070 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:pare01000] C 01001 Protein kinases [BR:pare01001] D PYJP_19810 Kae1-associated kinase Bud32 K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D PYJP_04960 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D PYJP_16200 serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C 01009 Protein phosphatases and associated proteins [BR:pare01009] D PYJP_13640 translation initiation factor IF-2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2 D PYJP_04640 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PYJP_08180 hypothetical protein K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PYJP_20320 HAD family phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:pare01002] D PYJP_03190 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D PYJP_17980 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D PYJP_13310 pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D PYJP_02880 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PYJP_03230 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PYJP_20600 pfpI; deglycase PfpI K26818 pfpI; archaeal arginyl aminopeptidase [EC:3.4.11.27] D PYJP_00530 hypothetical protein K07052 K07052; CAAX protease family protein D PYJP_00740 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PYJP_01950 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PYJP_15760 M20 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PYJP_03970 map; type II methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PYJP_19490 aminopeptidase P family protein K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D PYJP_08400 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D PYJP_20380 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D PYJP_05210 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D PYJP_17770 archaemetzincin family Zn-dependent metalloprotease K06974 amzA; archaemetzincin [EC:3.4.-.-] D PYJP_13040 M55 family metallopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D PYJP_12510 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D PYJP_03680 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] D PYJP_16450 hypothetical protein K07059 K07059; rhomboid family protein D PYJP_20050 hypothetical protein K07059 K07059; rhomboid family protein D PYJP_18380 psmA; archaeal proteasome endopeptidase complex subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D PYJP_14030 psmB_1; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D PYJP_14060 psmB_2; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D PYJP_20210 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PYJP_01220 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PYJP_19020 TldD/PmbA family protein K03592 pmbA; PmbA protein D PYJP_20070 TldD/PmbA family protein K03592 pmbA; PmbA protein D PYJP_19010 TldD/PmbA family protein K03568 tldD; TldD protein D PYJP_20060 TldD/PmbA family protein K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:pare01003] D PYJP_16640 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] D PYJP_09390 STT3 domain-containing protein K07151 STT3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18] D PYJP_00060 glycosyltransferase family 2 protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D PYJP_08010 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] C 01005 Lipopolysaccharide biosynthesis proteins C 01011 Peptidoglycan biosynthesis and degradation proteins C 01004 Lipid biosynthesis proteins [BR:pare01004] D PYJP_08040 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYJP_12550 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYJP_12860 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYJP_13030 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PYJP_02980 acetate--CoA ligase family protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PYJP_05730 acdAI; acetate--CoA ligase II subunit alpha K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D PYJP_15580 acetate--CoA ligase family protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D PYJP_02830 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYJP_02850 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYJP_06490 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 01008 Polyketide biosynthesis proteins [BR:pare01008] C 01006 Prenyltransferases [BR:pare01006] D PYJP_18630 gds; geranylgeranyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D PYJP_11240 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D PYJP_08410 ubiA; putative 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D PYJP_09340 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:pare01007] D PYJP_15510 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D PYJP_18610 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PYJP_03910 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PYJP_10770 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PYJP_09250 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PYJP_10090 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PYJP_10390 metG_1; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PYJP_07600 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PYJP_04240 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PYJP_09760 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PYJP_17590 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PYJP_15290 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D PYJP_03340 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PYJP_15460 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PYJP_09840 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PYJP_05120 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PYJP_03220 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PYJP_14320 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PYJP_03930 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PYJP_03920 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PYJP_16820 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PYJP_13150 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PYJP_07940 aspartate aminotransferase family protein K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D PYJP_04300 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PYJP_02470 hemL_1; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D PYJP_10720 hemL_2; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:pare03000] D PYJP_04670 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PYJP_03480 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D PYJP_07760 lysM; HTH-type transcriptional regulator LysM K06154 lysM; Lrp/AsnC family transcriptional regulator, involved in the regulation of lysine biosynthesis D PYJP_15830 hypothetical protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D PYJP_15770 thiamine-phosphate synthase family protein K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator D PYJP_02130 hypothetical protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D PYJP_04890 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PYJP_06150 hypothetical protein K07725 csa3; CRISPR-associated protein Csa3 D PYJP_15280 hypothetical protein K07728 K07728; putative transcriptional regulator D PYJP_19470 helix-turn-helix domain-containing protein K07731 K07731; putative transcriptional regulator D PYJP_17900 hypothetical protein K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D PYJP_18830 nikR; nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator C 03021 Transcription machinery [BR:pare03021] D PYJP_04010 transcription initiation factor IIB family protein K03124 TFIIB; transcription initiation factor TFIIB D PYJP_15500 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D PYJP_19560 transcription initiation factor IIB family protein K03124 TFIIB; transcription initiation factor TFIIB D PYJP_03480 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D PYJP_04680 transcription factor K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D PYJP_16300 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D PYJP_19760 DNA-binding protein K15171 SUPT4H1; transcription elongation factor SPT4 D PYJP_14280 transcription elongation factor Spt5 K15172 SUPT5H; transcription elongation factor SPT5 D PYJP_15780 ATP/GTP-binding protein K24104 GPN; GPN-loop GTPase D PYJP_17750 ATP/GTP-binding protein K24104 GPN; GPN-loop GTPase D PYJP_13940 NusA-like transcription termination signal-binding factor K02600 nusA; transcription termination/antitermination protein NusA D PYJP_13970 rpoA1; DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D PYJP_13960 rpoA2; DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D PYJP_13980 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D PYJP_18730 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D PYJP_19750 DNA-directed RNA polymerase K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D PYJP_19410 hypothetical protein K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6] D PYJP_13990 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D PYJP_03660 hypothetical protein K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D PYJP_14670 hypothetical protein K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D PYJP_18690 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D PYJP_15480 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] D PYJP_14650 transcription factor S K03057 tfs; transcription factor S D PYJP_18790 hypothetical protein K03057 tfs; transcription factor S C 03019 Messenger RNA biogenesis [BR:pare03019] D PYJP_19760 DNA-binding protein K15171 SUPT4H1; transcription elongation factor SPT4 D PYJP_14280 transcription elongation factor Spt5 K15172 SUPT5H; transcription elongation factor SPT5 D PYJP_05010 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D PYJP_13380 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D PYJP_03860 mRNA surveillance protein pelota K06965 PELO; protein pelota D PYJP_09550 prf1; peptide chain release factor aRF-1 K03265 ETF1; peptide chain release factor subunit 1 D PYJP_13900 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha D PYJP_14690 exosome complex RNA-binding protein Csl4 K07573 CSL4; exosome complex component CSL4 D PYJP_18360 rrp4; exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4 D PYJP_18350 rrp41; exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41 D PYJP_18340 rrp42; exosome complex protein Rrp42 K12589 RRP42; exosome complex component RRP42 D PYJP_03720 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 03041 Spliceosome [BR:pare03041] D PYJP_09950 ZPR1 zinc finger domain-containing protein K06874 ZPR1; zinc finger protein ZPR1 C 03011 Ribosome [BR:pare03011] D PYJP_19860 30S ribosomal protein S3ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D PYJP_08750 30S ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e D PYJP_19720 30S ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D PYJP_19510 30S ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D PYJP_19320 hypothetical protein K02962 RP-S17e; small subunit ribosomal protein S17e D PYJP_14190 30S ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D PYJP_19780 hypothetical protein K02974 RP-S24e; small subunit ribosomal protein S24e D PYJP_10330 hypothetical protein K02975 RP-S25e; small subunit ribosomal protein S25e D PYJP_05160 30S ribosomal protein S26e K02976 RP-S26e; small subunit ribosomal protein S26e D PYJP_14590 30S ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e D PYJP_19790 hypothetical protein K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D PYJP_18580 30S ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D PYJP_03540 hypothetical protein K02983 RP-S30e; small subunit ribosomal protein S30e D PYJP_08840 rpl4p; 50S ribosomal protein L4 K02930 RP-L4e; large subunit ribosomal protein L4e D PYJP_18600 rpl7ae; 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D PYJP_14720 50S ribosomal protein L16 K02866 RP-L10e; large subunit ribosomal protein L10e D PYJP_15950 hypothetical protein K02873 RP-L13e; large subunit ribosomal protein L13e D PYJP_08600 50S ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e D PYJP_18520 50S ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D PYJP_18720 50S ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D PYJP_08700 50S ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D PYJP_14790 50S ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D PYJP_18570 50S ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e D PYJP_13950 50S ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e D PYJP_14220 50S ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D PYJP_08710 50S ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D PYJP_08620 50S ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e D PYJP_04290 hypothetical protein K02917 RP-L35Ae; large subunit ribosomal protein L35Ae D PYJP_18330 50S ribosomal protein L37ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D PYJP_19610 hypothetical protein K02923 RP-L38e; large subunit ribosomal protein L38e D PYJP_14210 hypothetical protein K02924 RP-L39e; large subunit ribosomal protein L39e D PYJP_18260 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D PYJP_14600 50S ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e D PYJP_18680 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PYJP_08810 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PYJP_18750 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PYJP_08680 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PYJP_13910 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PYJP_08730 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PYJP_18700 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PYJP_13890 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PYJP_18740 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PYJP_13930 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PYJP_19830 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PYJP_08780 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PYJP_08930 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PYJP_14300 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PYJP_08940 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PYJP_08850 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PYJP_08740 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PYJP_08720 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PYJP_14310 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PYJP_14290 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PYJP_18710 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PYJP_08770 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PYJP_08660 uL15 family ribosomal protein K02876 RP-L15; large subunit ribosomal protein L15 D PYJP_08690 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PYJP_08820 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PYJP_08830 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PYJP_08760 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PYJP_08800 hypothetical protein K02904 RP-L29; large subunit ribosomal protein L29 D PYJP_08670 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PYJP_20200 rpl12p; 50S ribosomal protein P1 K02869 RP-L12; large subunit ribosomal protein L12 D PYJP_14240 hypothetical protein K02944 RP-LX; large subunit ribosomal protein LX D PYJP_r00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:pare03009] D PYJP_15250 C/D box methylation guide ribonucleoprotein complex aNOP56 subunit K14564 NOP56; nucleolar protein 56 D PYJP_18320 hypothetical protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D PYJP_08380 16S rRNA methyltransferase K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D PYJP_14160 16S rRNA methyltransferase K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D PYJP_04950 KH domain-containing protein K06961 KRR1; ribosomal RNA assembly protein D PYJP_04960 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D PYJP_16200 serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D PYJP_19340 hypothetical protein K18532 AK6; adenylate kinase [EC:2.7.4.3] D PYJP_15070 DUF367 family protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D PYJP_19290 ribosome biogenesis/translation initiation ATPase RLI K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 D PYJP_14080 NOG1 family protein K06943 NOG1; nucleolar GTP-binding protein D PYJP_08790 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D PYJP_18490 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D PYJP_18500 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D PYJP_12140 hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] D PYJP_14540 Clp1/GlmU family protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] D PYJP_14230 translation initiation factor IF-6 K03264 EIF6; translation initiation factor 6 D PYJP_09710 hypothetical protein K07562 NMD3; 60S ribosomal export protein NMD3 D PYJP_13460 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3 D PYJP_18370 ribosome assembly factor SBDS K14574 SDO1; ribosome maturation protein SDO1 D PYJP_05010 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D PYJP_13380 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D PYJP_14120 hypothetical protein K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D PYJP_15260 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase K04795 flpA; fibrillarin-like pre-rRNA processing protein D PYJP_18600 rpl7ae; 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D PYJP_19550 hypothetical protein K07569 gar1; RNA-binding protein D PYJP_13940 NusA-like transcription termination signal-binding factor K02600 nusA; transcription termination/antitermination protein NusA D PYJP_14760 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6)) -dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D PYJP_10640 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D PYJP_19000 hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D PYJP_20250 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D PYJP_08580 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D PYJP_18220 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D PYJP_03060 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D PYJP_03850 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D PYJP_04700 hflX; GTPase HflX K03665 hflX; GTPase D PYJP_07520 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PYJP_14180 hypothetical protein K07574 yhbY; RNA-binding protein D PYJP_18530 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D PYJP_14460 ribonuclease E/G K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-] C 03016 Transfer RNA biogenesis [BR:pare03016] D PYJP_08790 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D PYJP_18490 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D PYJP_18500 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D PYJP_14170 hypothetical protein K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5] D PYJP_01170 hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11] D PYJP_07850 MBL fold metallo-hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11] D PYJP_00110 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D PYJP_11480 archease K24956 ZBTB8OS; protein archease D PYJP_13900 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha D PYJP_18610 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PYJP_05120 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PYJP_07600 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PYJP_09760 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PYJP_10390 metG_1; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PYJP_10090 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PYJP_14320 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PYJP_17590 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PYJP_15460 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PYJP_03220 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PYJP_09840 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PYJP_09250 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PYJP_04240 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PYJP_03340 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PYJP_03930 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PYJP_03920 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PYJP_03910 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PYJP_10770 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PYJP_05100 D-aminoacyl-tRNA deacylase K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D PYJP_09490 alaXM; alanyl-tRNA editing protein AlaXM K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] D PYJP_13700 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotran sferase K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5] D PYJP_19580 tRNA (guanine(10)-N(2))-dimethyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D PYJP_13340 class I SAM-dependent methyltransferase family protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D PYJP_16060 methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D PYJP_02570 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D PYJP_10460 twy1; 4-demethylwyosine synthase TYW1 K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] D PYJP_04760 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282] D PYJP_15210 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282] D PYJP_08590 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D PYJP_13420 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D PYJP_14800 tRNA pseudouridine(54/55) synthase Pus10 K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25] D PYJP_19810 Kae1-associated kinase Bud32 K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D PYJP_19800 kae1; KEOPS complex N(6)-L-threonylcarbamoyladenine synthase Kae1 K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D PYJP_07520 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PYJP_19870 SPOUT family RNA methylase K06963 TAN1; tRNA acetyltransferase TAN1 D PYJP_08100 RNA ligase partner protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5] D PYJP_15100 cca; CCA tRNA nucleotidyltransferase K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] D PYJP_03330 hypothetical protein K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16] D PYJP_15410 endA; tRNA-intron lyase K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16] D PYJP_11000 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D PYJP_18950 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D PYJP_15510 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D PYJP_15290 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D PYJP_04350 hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D PYJP_05150 hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257] D PYJP_16100 hypothetical protein K15566 trm10; tRNA (adenine9-N1/guanine9-N1)-methyltransferase [EC:2.1.1.218 2.1.1.221] D PYJP_14730 trm14; tRNA (guanine(6)-N2)-methyltransferase K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256] D PYJP_04690 tRNA (cytidine(56)-2'-O)-methyltransferase K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] D PYJP_16010 TIGR00269 family protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D PYJP_18310 hypothetical protein K09741 pcc1; KEOPS complex subunit Pcc1 D PYJP_16840 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PYJP_04480 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PYJP_06440 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PYJP_06450 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PYJP_05780 hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D PYJP_19390 tgtA; tRNA guanosine(15) transglycosylase TgtA K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48] D PYJP_18410 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PYJP_15050 tiaS; tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22] D PYJP_03350 tRNA(Met) cytidine acetyltransferase TmcA K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D PYJP_04850 tRNA(Met) cytidine acetyltransferase TmcA K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D PYJP_17760 hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] C 03012 Translation factors [BR:pare03012] D PYJP_04970 translation initiation factor aIF-1A K03236 EIF1A; translation initiation factor 1A D PYJP_15490 yciH; stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1 D PYJP_14580 translation initiation factor IF-2 subunit alpha K03237 EIF2S1; translation initiation factor 2 subunit 1 D PYJP_13640 translation initiation factor IF-2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2 D PYJP_19730 eif2g; translation initiation factor IF-2 subunit gamma K03242 EIF2S3; translation initiation factor 2 subunit 3 D PYJP_14830 translation initiation factor IF-5A K03263 EIF5A; translation initiation factor 5A D PYJP_19710 infB; translation initiation factor IF-2 K03243 EIF5B; translation initiation factor 5B D PYJP_14230 translation initiation factor IF-6 K03264 EIF6; translation initiation factor 6 D PYJP_13900 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha D PYJP_13390 elongation factor 1-beta K03232 EEF1B; elongation factor 1-beta D PYJP_10670 elongation factor EF-2 K03234 EEF2; elongation factor 2 D PYJP_14710 dph2; diphthamide biosynthesis enzyme Dph2 K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108] D PYJP_13500 diphthine--ammonia ligase K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14] D PYJP_09550 prf1; peptide chain release factor aRF-1 K03265 ETF1; peptide chain release factor subunit 1 D PYJP_14750 methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D PYJP_13410 pth2; peptidyl-tRNA hydrolase Pth2 K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] C 03110 Chaperones and folding catalysts [BR:pare03110] D PYJP_03650 thsA; thermosome subunit alpha K22447 cct; archaeal chaperonin D PYJP_19330 thsB; thermosome subunit beta K22447 cct; archaeal chaperonin D PYJP_09940 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D PYJP_13600 hypothetical protein K13993 HSP20; HSP20 family protein D PYJP_00580 pfdA; prefoldin subunit alpha K04797 pfdA; prefoldin alpha subunit D PYJP_14250 hypothetical protein K04797 pfdA; prefoldin alpha subunit D PYJP_00590 hypothetical protein K04798 pfdB; prefoldin beta subunit D PYJP_18300 hypothetical protein K04798 pfdB; prefoldin beta subunit D PYJP_17890 hypA; hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D PYJP_17880 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D PYJP_14130 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D PYJP_10510 trxA; thioredoxin K03671 TXN; thioredoxin D PYJP_11870 hypothetical protein K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:pare04131] D PYJP_18540 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PYJP_05010 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D PYJP_13380 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D PYJP_02420 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PYJP_07990 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PYJP_18900 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PYJP_13900 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha C 04121 Ubiquitin system [BR:pare04121] D PYJP_18260 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D PYJP_19790 hypothetical protein K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D PYJP_03540 hypothetical protein K02983 RP-S30e; small subunit ribosomal protein S30e C 03051 Proteasome [BR:pare03051] D PYJP_18380 psmA; archaeal proteasome endopeptidase complex subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D PYJP_14030 psmB_1; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D PYJP_14060 psmB_2; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D PYJP_04720 proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit C 03032 DNA replication proteins [BR:pare03032] D PYJP_09030 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen D PYJP_14630 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen D PYJP_15140 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen D PYJP_13360 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PYJP_19950 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D PYJP_04670 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PYJP_19650 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D PYJP_03900 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D PYJP_03740 ORC1-type DNA replication protein K10725 cdc6A; archaeal cell division control protein 6 D PYJP_16630 ORC1-type DNA replication protein K10725 cdc6A; archaeal cell division control protein 6 D PYJP_03800 minichromosome maintenance protein MCM K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D PYJP_14620 priS; DNA primase small subunit PriS K02683 priS; DNA primase small subunit [EC:2.7.7.102] D PYJP_10310 priL; DNA primase regulatory subunit PriL K18882 priL; DNA primase large subunit D PYJP_03790 hypothetical protein K09723 ginS; DNA replication factor GINS D PYJP_12960 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PYJP_10630 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PYJP_03840 DNA polymerase II K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D PYJP_09170 DNA-directed DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D PYJP_03770 replication factor C large subunit K04800 rfcL; replication factor C large subunit D PYJP_03780 replication factor C small subunit K04801 rfcS; replication factor C small subunit D PYJP_03270 DNA topoisomerase IV subunit A K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2] D PYJP_03280 DNA topoisomerase VI subunit B K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] D PYJP_03670 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PYJP_03510 rgy; reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] D PYJP_12330 hypothetical protein K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] C 03036 Chromosome and associated proteins [BR:pare03036] D PYJP_04670 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PYJP_08860 putative RNA uridine N3 methyltransferase K09142 SPOUT1; methyltransferase [EC:2.1.1.-] D PYJP_08110 hypothetical protein K04763 xerD; integrase/recombinase XerD D PYJP_09060 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:pare03400] D PYJP_10470 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D PYJP_00180 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PYJP_01010 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PYJP_09030 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen D PYJP_14630 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen D PYJP_15140 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen D PYJP_13360 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PYJP_19950 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D PYJP_16300 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D PYJP_19650 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D PYJP_04280 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PYJP_04470 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PYJP_16030 udg; type-4 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PYJP_12600 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D PYJP_02490 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D PYJP_14050 hypothetical protein K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D PYJP_12960 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PYJP_09200 rad50; DNA double-strand break repair ATPase Rad50 K03546 sbcC; DNA repair protein SbcC/Rad50 D PYJP_09210 mre11; DNA double-strand break repair protein Mre11 K03547 sbcD; DNA repair protein SbcD/Mre11 D PYJP_06260 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D PYJP_03210 radA; DNA repair and recombination protein RadA K04483 radA; DNA repair protein RadA D PYJP_14560 hypothetical protein K04484 radB; DNA repair protein RadB D PYJP_09110 hjc; Holliday junction resolvase Hjc K03552 hjr; holliday junction resolvase [EC:3.1.21.10] D PYJP_09220 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D PYJP_20130 DEAD/DEAH box helicase K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] D PYJP_03670 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PYJP_03130 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D PYJP_03430 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D PYJP_08990 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D PYJP_04510 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PYJP_09540 Nre family DNA repair protein K22585 nreA; DNA repair protein NreA C 03029 Mitochondrial biogenesis [BR:pare03029] D PYJP_08790 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D PYJP_18490 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D PYJP_18500 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D PYJP_03910 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PYJP_09760 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PYJP_15460 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PYJP_10090 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PYJP_17790 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PYJP_10800 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D PYJP_10530 hypothetical protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D PYJP_09060 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D PYJP_09340 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:pare02000] D PYJP_07380 wtpA; tungstate ABC transporter substrate-binding protein WtpA K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D PYJP_07370 wtpB; tungstate ABC transporter permease WtpB K15496 wtpB; molybdate/tungstate transport system permease protein D PYJP_00410 hypothetical protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D PYJP_07360 hypothetical protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D PYJP_00420 hypothetical protein K15552 tauC; taurine transport system permease protein D PYJP_00430 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D PYJP_08450 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D PYJP_08430 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D PYJP_16260 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PYJP_20090 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PYJP_16270 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYJP_20100 hypothetical protein K02011 afuB; iron(III) transport system permease protein D PYJP_16280 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PYJP_18160 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D PYJP_12470 ABC transporter permease subunit K02063 thiP; thiamine transport system permease protein D PYJP_10940 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D PYJP_08440 hypothetical protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D PYJP_16780 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PYJP_02580 extracellular solute-binding protein K17237 inoE; inositol-phosphate transport system substrate-binding protein D PYJP_02590 sugar ABC transporter permease K17238 inoF; inositol-phosphate transport system permease protein D PYJP_02600 carbohydrate ABC transporter permease K17239 inoG; inositol-phosphate transport system permease protein D PYJP_02610 ABC transporter ATP-binding protein K17240 inoK; inositol-phosphate transport system ATP-binding protein D PYJP_02530 BMP family protein K07335 bmpA; basic membrane protein A and related proteins D PYJP_11570 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D PYJP_02550 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D PYJP_15970 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D PYJP_02560 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D PYJP_15980 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D PYJP_02540 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D PYJP_15960 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D PYJP_16750 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D PYJP_16760 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D PYJP_16770 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D PYJP_05350 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D PYJP_05340 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D PYJP_05330 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D PYJP_05320 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PYJP_04610 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D PYJP_04590 hypothetical protein K17077 artQ; arginine/lysine/histidine transport system permease protein D PYJP_02800 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_06550 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_11330 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_11380 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_12110 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_13250 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_16370 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PYJP_02820 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_06540 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_11360 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_11410 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_12100 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_13260 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D PYJP_02810 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_06530 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_11370 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_11420 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D PYJP_12090 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_13270 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_16410 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D PYJP_02840 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_06520 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_11340 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_11390 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_12080 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_13280 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_16380 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D PYJP_02790 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_06510 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_11350 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_11400 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_12070 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_13290 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_16390 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PYJP_16400 branched-chain amino acid ABC transporter permease K11956 natD; neutral amino acid transport system permease protein D PYJP_04580 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PYJP_04600 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D PYJP_07690 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PYJP_10850 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PYJP_17390 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PYJP_20510 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PYJP_07700 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D PYJP_10860 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D PYJP_17410 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D PYJP_20490 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D PYJP_07710 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PYJP_10870 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PYJP_17420 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PYJP_20480 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PYJP_07720 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PYJP_08200 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PYJP_20470 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PYJP_10880 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D PYJP_20460 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D PYJP_06930 ABC transporter ATP-binding protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] D PYJP_06920 iron ABC transporter permease K25114 htsB; heme transport system permease protein D PYJP_06910 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D PYJP_18850 hypothetical protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D PYJP_18840 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D PYJP_18860 metal ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D PYJP_06680 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D PYJP_00860 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PYJP_05820 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PYJP_05830 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D PYJP_06690 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PYJP_10570 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D PYJP_12390 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PYJP_12450 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D PYJP_12920 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D PYJP_00850 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PYJP_02700 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PYJP_05840 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PYJP_06760 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PYJP_10580 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PYJP_12380 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PYJP_12460 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PYJP_12680 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PYJP_12910 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PYJP_15880 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D PYJP_12580 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PYJP_15900 yknY; ABC transporter ATP-binding protein YknY K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PYJP_00490 sufC_1; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D PYJP_02200 sufC_2; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D PYJP_19170 sufC_3; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D PYJP_01660 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D PYJP_00240 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D PYJP_00090 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D PYJP_05860 ion channel K10716 kch; voltage-gated potassium channel D PYJP_02090 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D PYJP_02660 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D PYJP_02400 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D PYJP_11290 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D PYJP_08520 hypothetical protein K08978 TC.BAT1; bacterial/archaeal transporter family protein D PYJP_18560 hypothetical protein K03298 TC.DME; drug/metabolite transporter, DME family D PYJP_12980 cation acetate symporter K14393 actP; cation/acetate symporter D PYJP_05990 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D PYJP_03710 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D PYJP_10610 chloride channel protein K03281 clcA; chloride channel protein, CIC family D PYJP_19070 chloride channel protein K03281 clcA; chloride channel protein, CIC family D PYJP_02420 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PYJP_07990 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PYJP_11960 hypothetical protein K03325 ACR3; arsenite transporter D PYJP_14850 AEC family transporter K24180 mleP; malate permease and related proteins D PYJP_10030 MarC family protein K05595 marC; multiple antibiotic resistance protein D PYJP_12530 YchE family NAAT transporter K05595 marC; multiple antibiotic resistance protein D PYJP_20240 FeoA family protein K04758 feoA; ferrous iron transport protein A D PYJP_02140 feoB_1; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D PYJP_04410 feoB_2; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D PYJP_08970 hypothetical protein K25504 cedA; DNA import protein CedA D PYJP_08980 hypothetical protein K25505 cedA1; DNA import protein CedA1 D PYJP_05560 hypothetical protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:pare02044] D PYJP_15600 flagellin K07325 flaB; archaeal flagellin FlaB D PYJP_15640 hypothetical protein K07330 flaG; archaeal flagellar protein FlaG D PYJP_15660 ATPase domain-containing protein K07331 flaH; archaeal flagellar protein FlaH D PYJP_10280 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI D PYJP_12300 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI D PYJP_15670 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI D PYJP_10290 type II secretion system F family protein K07333 flaJ; archaeal flagellar protein FlaJ D PYJP_15680 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ D PYJP_03190 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D PYJP_08650 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PYJP_14820 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PYJP_14260 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PYJP_15870 signal recognition particle subunit SRP19/SEC65 family protein K03105 SRP19; signal recognition particle subunit SRP19 D PYJP_07650 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D PYJP_05230 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D PYJP_05220 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins C 02022 Two-component system C 02035 Bacterial motility proteins [BR:pare02035] D PYJP_15600 flagellin K07325 flaB; archaeal flagellin FlaB D PYJP_15640 hypothetical protein K07330 flaG; archaeal flagellar protein FlaG D PYJP_15660 ATPase domain-containing protein K07331 flaH; archaeal flagellar protein FlaH D PYJP_10280 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI D PYJP_12300 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI D PYJP_15670 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI D PYJP_10290 type II secretion system F family protein K07333 flaJ; archaeal flagellar protein FlaJ D PYJP_15680 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ D PYJP_03190 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:pare04812] D PYJP_18670 amrB; AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein D PYJP_20330 MEMO1 family protein K06990 MEMO1; MEMO1 family protein C 04147 Exosome [BR:pare04147] D PYJP_03720 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PYJP_03440 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PYJP_18900 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PYJP_11310 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D PYJP_13900 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha D PYJP_10670 elongation factor EF-2 K03234 EEF2; elongation factor 2 D PYJP_13360 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D PYJP_20170 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PYJP_19790 hypothetical protein K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D PYJP_05010 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D PYJP_13380 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D PYJP_02830 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYJP_02850 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYJP_06490 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYJP_01110 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PYJP_04640 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PYJP_08180 hypothetical protein K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PYJP_08640 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PYJP_13160 phosphoribosyltransferase family protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PYJP_17640 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PYJP_17650 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PYJP_19110 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D PYJP_09180 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PYJP_18970 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PYJP_07780 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PYJP_04430 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D PYJP_19260 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:pare02048] D PYJP_06260 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D PYJP_06130 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2 D PYJP_06200 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D PYJP_06270 cas4a; type I-A CRISPR-associated protein Cas4/Csa1 K19085 csa1; CRISPR-associated protein Csa1 D PYJP_06170 cas7a; type I-A CRISPR-associated protein Cas7/Csa2 K19074 csa2; CRISPR-associated protein Csa2 D PYJP_06150 hypothetical protein K07725 csa3; CRISPR-associated protein Csa3 D PYJP_03400 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D PYJP_06140 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D PYJP_06180 hypothetical protein K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c D PYJP_06360 hypothetical protein K07061 cmr1; CRISPR-associated protein Cmr1 D PYJP_06370 hypothetical protein K19142 cmr6; CRISPR-associated protein Cmr6 D PYJP_04670 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PYJP_04000 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D PYJP_15800 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D PYJP_18610 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PYJP_13320 type II toxin-antitoxin system VapC family toxin K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:pare03100] D PYJP_r00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D PYJP_14440 indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D PYJP_14450 indolepyruvate oxidoreductase subunit beta K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D PYJP_17330 NADH-quinone oxidoreductase subunit D K22161 fpoD; F420H2 dehydrogenase subunit D [EC:1.5.98.3] D PYJP_10990 cdr; CoA-disulfide reductase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18] D PYJP_01490 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D PYJP_18890 class II SORL domain-containing protein K05919 dfx; superoxide reductase [EC:1.15.1.2] D PYJP_09800 radical SAM protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D PYJP_05740 amrS_1; AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PYJP_12640 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PYJP_19200 amrS_2; AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PYJP_09820 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PYJP_13350 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D PYJP_15740 dph5; diphthine synthase K20215 dph5; diphthine synthase [EC:2.1.1.98] D PYJP_18120 hypothetical protein K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350] D PYJP_16790 glycosyltransferase K21349 ggs; glucosylglycerate synthase [EC:2.4.1.268] D PYJP_04980 modD; ModD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-] D PYJP_15350 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D PYJP_14960 geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase K25920 E2.5.1.155; phosphoglycerol geranylfarnesyltransferase [EC:2.5.1.155] D PYJP_08210 pgsA; archaetidylinositol phosphate synthase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39] D PYJP_13200 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D PYJP_04380 hypothetical protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D PYJP_07790 hypothetical protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D PYJP_09790 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PYJP_10300 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-] D PYJP_05370 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D PYJP_02710 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D PYJP_05770 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D PYJP_10010 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D PYJP_15000 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D PYJP_20400 S-adenosyl-l-methionine hydroxide adenosyltransferase family protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D PYJP_03490 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D PYJP_19690 N-glycosylase/DNA lyase K01741 E4.2.99.18; DNA-(apurinic or apyrimidinic site) lyase [EC:4.2.99.18] D PYJP_14090 rtcA; RNA 3'-terminal phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4] D PYJP_08070 RNA ligase K07468 K07468; DNA/RNA ligase [EC:6.5.1.-] C 99981 Carbohydrate metabolism D PYJP_01500 sfsA_1; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A D PYJP_13180 sfsA_2; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A D PYJP_05750 lactate utilization protein B K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D PYJP_19660 ferredoxin K05337 fer; ferredoxin D PYJP_05420 hypothetical protein K02573 napG; ferredoxin-type protein NapG D PYJP_05410 napH; quinol dehydrogenase ferredoxin subunit NapH K02574 napH; ferredoxin-type protein NapH D PYJP_00670 nrfD_1; polysulfide reductase NrfD K04015 nrfD; protein NrfD C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism D PYJP_10240 YbhN family protein K07027 K07027; glycosyltransferase 2 family protein D PYJP_17600 YbhN family protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D PYJP_07880 hypothetical protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D PYJP_04710 multiprotein bridging factor aMBF1 K03627 MBF1; putative transcription factor D PYJP_03520 albA; DNA-binding protein Alba K03622 ssh10b; archaea-specific DNA-binding protein D PYJP_14000 LSm family protein K04796 RUXX; small nuclear ribonucleoprotein D PYJP_16150 U6 snRNA-associated Sm-like protein LSm6 K04796 RUXX; small nuclear ribonucleoprotein D PYJP_09410 transcriptional regulator K07743 K07743; transcriptional regulator D PYJP_20560 hypothetical protein K07745 K07745; transcriptional regulator C 99974 Translation D PYJP_14770 DUF655 domain-containing protein K07572 K07572; putative nucleotide binding protein D PYJP_10540 MBL fold metallo-hydrolase K07577 K07577; putative mRNA 3-end processing factor D PYJP_19450 MBL fold metallo-hydrolase K07577 K07577; putative mRNA 3-end processing factor D PYJP_14700 METTL5 family protein K07579 K07579; putative methylase D PYJP_13400 zinc finger domain-containing protein K07580 K07580; Zn-ribbon RNA-binding protein D PYJP_18510 RNA-binding protein K07581 K07581; RNA-binding protein C 99975 Protein processing D PYJP_18010 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC D PYJP_18020 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D PYJP_18000 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D PYJP_17990 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF D PYJP_19370 hypothetical protein K07398 K07398; conserved protein with predicted RNA binding PUA domain D PYJP_15820 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D PYJP_07150 DUF1156 domain-containing protein K07445 K07445; putative DNA methylase D PYJP_20160 RuvB-like helicase K07472 TIP49; TBP-interacting protein D PYJP_19350 hypothetical protein K07477 K07477; translin C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D PYJP_00190 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family C 99978 Cell growth D PYJP_17230 hypothetical protein K07321 cooC; CO dehydrogenase maturation factor D PYJP_09980 hypothetical protein K06384 spoIIM; stage II sporulation protein M C 99993 Cell motility C 99995 Signaling proteins D PYJP_02440 carbon starvation protein A K06200 cstA; carbon starvation protein D PYJP_15090 hypothetical protein K07176 K07176; putative serine/threonine protein kinase D PYJP_12970 hypothetical protein K07182 K07182; CBS domain-containing protein D PYJP_12250 ATPase domain-containing protein K08482 kaiC; circadian clock protein KaiC D PYJP_12260 ATPase domain-containing protein K08482 kaiC; circadian clock protein KaiC D PYJP_14200 DNA-binding protein K06875 PDCD5; programmed cell death protein 5 C 99992 Structural proteins C 99994 Others D PYJP_05310 phosphate uptake regulator PhoU K02039 phoU; phosphate transport system protein D PYJP_00810 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein B B 09194 Poorly characterized C 99996 General function prediction only D PYJP_09120 PINc/VapC family ATPase K06865 K06865; ATPase D PYJP_15920 metG_2; methionine--tRNA ligase subunit beta K06878 K06878; tRNA-binding protein D PYJP_02270 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D PYJP_06800 YjjG family noncanonical pyrimidine nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily D PYJP_00480 sufB_1; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D PYJP_19160 sufB_2; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D PYJP_02210 SufD family Fe-S cluster assembly protein K09014 sufB; Fe-S cluster assembly protein SufB D PYJP_08050 hypothetical protein K07038 K07038; inner membrane protein D PYJP_09990 TatD family hydrolase K07049 K07049; TatD-related deoxyribonuclease D PYJP_14500 Sjogren's syndrome/scleroderma autoantigen 1 family protein K07143 K07143; UPF0148 protein D PYJP_02770 LemA family protein K03744 lemA; LemA protein D PYJP_13660 DUF373 family protein K08975 K08975; putative membrane protein C 99997 Function unknown D PYJP_13610 proteasome assembly chaperone family protein K06869 K06869; uncharacterized protein D PYJP_19380 proteasome assembly chaperone family protein K06869 K06869; uncharacterized protein D PYJP_16040 hypothetical protein K06870 K06870; uncharacterized protein D PYJP_18810 CGP-CTERM sorting domain-containing protein K06870 K06870; uncharacterized protein D PYJP_05170 hypothetical protein K06885 K06885; uncharacterized protein D PYJP_01160 ATP-binding protein K06921 K06921; uncharacterized protein D PYJP_01840 hypothetical protein K06921 K06921; uncharacterized protein D PYJP_01960 ATP-binding protein K06921 K06921; uncharacterized protein D PYJP_02180 ATPase K06921 K06921; uncharacterized protein D PYJP_06830 ATP-binding protein K06921 K06921; uncharacterized protein D PYJP_20580 ATP-binding protein K06921 K06921; uncharacterized protein D PYJP_07160 ATP-binding protein K06922 K06922; uncharacterized protein D PYJP_13720 hypothetical protein K06933 K06933; uncharacterized protein D PYJP_00100 hypothetical protein K06934 K06934; uncharacterized protein D PYJP_16580 radical SAM protein K06935 K06935; uncharacterized protein D PYJP_08870 hypothetical protein K06940 K06940; uncharacterized protein D PYJP_10410 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D PYJP_16350 hypothetical protein K06940 K06940; uncharacterized protein D PYJP_09300 HD domain-containing protein K06950 K06950; uncharacterized protein D PYJP_00500 metallophosphoesterase K06953 K06953; uncharacterized protein D PYJP_10520 BtpA/SgcQ family protein K06971 K06971; uncharacterized protein D PYJP_15180 hypothetical protein K06983 K06983; uncharacterized protein D PYJP_10370 MBL fold metallo-hydrolase K07022 K07022; uncharacterized protein D PYJP_19040 hypothetical protein K07022 K07022; uncharacterized protein D PYJP_00470 SufD family Fe-S cluster assembly protein K07033 K07033; uncharacterized protein D PYJP_14020 beta-CASP ribonuclease aCPSF1 K07041 K07041; uncharacterized protein D PYJP_13010 hypothetical protein K07045 K07045; uncharacterized protein D PYJP_04550 hypothetical protein K07064 K07064; uncharacterized protein D PYJP_05680 PIN domain-containing protein K07064 K07064; uncharacterized protein D PYJP_07110 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein D PYJP_11980 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein D PYJP_12340 PIN domain-containing protein K07064 K07064; uncharacterized protein D PYJP_12430 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein D PYJP_12490 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein D PYJP_12780 hypothetical protein K07064 K07064; uncharacterized protein D PYJP_17150 PIN domain-containing protein K07064 K07064; uncharacterized protein D PYJP_01120 Zn-ribbon domain-containing OB-fold protein K07068 K07068; uncharacterized protein D PYJP_03880 nucleotidyltransferase domain-containing protein K07073 K07073; uncharacterized protein D PYJP_11940 hypothetical protein K07090 K07090; uncharacterized protein D PYJP_14880 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D PYJP_16930 hypothetical protein K07090 K07090; uncharacterized protein D PYJP_01370 metallophosphoesterase K07095 K07095; uncharacterized protein D PYJP_19890 metallophosphoesterase K07096 K07096; uncharacterized protein D PYJP_02620 DHHA1 domain-containing protein K07097 K07097; uncharacterized protein D PYJP_19680 hypothetical protein K07097 K07097; uncharacterized protein D PYJP_16110 phosphoribosyltransferase K07101 K07101; uncharacterized protein D PYJP_19310 phosphoribosyltransferase K07101 K07101; uncharacterized protein D PYJP_03580 transcriptional regulator K07108 K07108; uncharacterized protein D PYJP_17250 hypothetical protein K07108 K07108; uncharacterized protein D PYJP_08130 GNAT family N-acetyltransferase K07128 K07128; uncharacterized protein D PYJP_03870 radical SAM protein K07129 K07129; uncharacterized protein D PYJP_06860 hypothetical protein K07131 K07131; uncharacterized protein D PYJP_18870 tRNA-binding protein K07135 K07135; uncharacterized protein D PYJP_19740 hypothetical protein K07158 K07158; uncharacterized protein D PYJP_19500 DUF763 domain-containing protein K09003 K09003; uncharacterized protein D PYJP_08280 DUF505 family protein K09010 K09010; uncharacterized protein D PYJP_16600 DUF99 family protein K09120 K09120; uncharacterized protein D PYJP_04820 hypothetical protein K09122 K09122; uncharacterized protein D PYJP_09670 adenosine-specific kinase K09129 K09129; uncharacterized protein D PYJP_00320 hypothetical protein K09131 K09131; uncharacterized protein D PYJP_10100 hypothetical protein K09131 K09131; uncharacterized protein D PYJP_00710 DUF401 family protein K09133 K09133; uncharacterized protein D PYJP_11300 DUF190 domain-containing protein K09137 K09137; uncharacterized protein D PYJP_01530 hypothetical protein K09138 K09138; uncharacterized protein D PYJP_20270 TIGR00296 family protein K09141 K09141; uncharacterized protein D PYJP_19670 hypothetical protein K09147 K09147; uncharacterized protein D PYJP_13630 DUF424 domain-containing protein K09148 K09148; uncharacterized protein D PYJP_16130 DUF460 domain-containing protein K09150 K09150; uncharacterized protein D PYJP_03370 hypothetical protein K09154 K09154; uncharacterized protein D PYJP_00570 DUF711 family protein K09157 K09157; uncharacterized protein D PYJP_08390 HD domain-containing protein K09163 K09163; uncharacterized protein D PYJP_14410 hypothetical protein K09386 K09386; uncharacterized protein D PYJP_00130 hypothetical protein K09715 K09715; uncharacterized protein D PYJP_14490 UPF0147 family protein K09721 K09721; uncharacterized protein D PYJP_15930 DUF211 domain-containing protein K09732 K09732; uncharacterized protein D PYJP_11470 RNA-binding domain-containing protein K09736 K09736; uncharacterized protein D PYJP_15270 hypothetical protein K09737 K09737; uncharacterized protein D PYJP_14680 hypothetical protein K09742 K09742; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 1, 2024