+D GENES KO #

  KEGG Orthology (KO) - Pelagibacterium flavum

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:pem00010] D OF122_10510 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D OF122_09235 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D OF122_11630 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D OF122_04410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D OF122_10865 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D OF122_04420 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D OF122_06695 type II glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D OF122_04415 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D OF122_00445 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D OF122_10840 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D OF122_04230 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D OF122_15615 PEP-utilizing enzyme K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D OF122_10830 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D OF122_10825 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D OF122_10820 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D OF122_01255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_10810 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_08910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D OF122_07015 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D OF122_08115 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D OF122_09205 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D OF122_01585 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D OF122_07475 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D OF122_19215 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:pem00020] D OF122_11005 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D OF122_00735 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D OF122_08455 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D OF122_01240 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D OF122_01245 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D OF122_01255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_10810 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_01235 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D OF122_01230 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D OF122_01195 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D OF122_01200 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D OF122_01185 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D OF122_01190 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D OF122_02780 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D OF122_01225 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D OF122_02730 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D OF122_19215 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D OF122_10830 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D OF122_10825 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D OF122_10820 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:pem00030] D OF122_10510 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D OF122_17800 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D OF122_17795 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D OF122_08725 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D OF122_08605 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D OF122_04425 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D OF122_16225 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D OF122_14510 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D OF122_17690 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D OF122_19130 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D OF122_17670 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D OF122_07475 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D OF122_06000 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D OF122_06655 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D OF122_17790 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D OF122_03835 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D OF122_14950 PQQ-binding-like beta-propeller repeat protein K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D OF122_08720 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D OF122_16835 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D OF122_05260 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D OF122_18585 aminotransferase class V-fold PLP-dependent enzyme K17468 dgaE; D-glucosaminate-6-phosphate ammonia-lyase [EC:4.3.1.29] D OF122_04410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D OF122_09235 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D OF122_11630 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] C 00040 Pentose and glucuronate interconversions [PATH:pem00040] D OF122_04895 SDR family oxidoreductase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D OF122_04120 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D OF122_13595 mannitol dehydrogenase family protein K00041 uxaB; tagaturonate reductase [EC:1.1.1.58] D OF122_04130 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D OF122_01595 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D OF122_13665 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D OF122_03890 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D OF122_08605 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D OF122_00160 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D OF122_00165 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D OF122_16605 rhaI; L-rhamnose catabolism isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D OF122_14810 D-lyxose/D-mannose family sugar isomerase K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15] D OF122_14650 SDR family oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175] D OF122_04000 dihydroxy-acid dehydratase family protein K22186 xylD; xylonate dehydratase [EC:4.2.1.82] D OF122_12135 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D OF122_18030 FGGY-family carbohydrate kinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47] C 00051 Fructose and mannose metabolism [PATH:pem00051] D OF122_03805 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D OF122_02500 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D OF122_02505 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D OF122_13585 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D OF122_13590 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120] D OF122_13630 SDR family oxidoreductase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434] D OF122_16605 rhaI; L-rhamnose catabolism isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D OF122_09235 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D OF122_11630 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D OF122_00165 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D OF122_18040 mannitol dehydrogenase family protein K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67] D OF122_04410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D OF122_10865 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D OF122_19235 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:pem00052] D OF122_01585 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D OF122_03895 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D OF122_03890 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D OF122_07475 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D OF122_15365 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] D OF122_17165 Gfo/Idh/MocA family oxidoreductase K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48] D OF122_04010 mandelate racemase/muconate lactonizing enzyme family protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D OF122_14680 mandelate racemase/muconate lactonizing enzyme family protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D OF122_17200 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D OF122_17205 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D OF122_16175 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D OF122_16255 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:pem00053] D OF122_01595 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D OF122_13665 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D OF122_13585 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D OF122_01600 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D OF122_01995 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D OF122_17170 araD; L-arabinonate dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25] D OF122_12135 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00500 Starch and sucrose metabolism [PATH:pem00500] D OF122_16175 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D OF122_16255 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D OF122_03890 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D OF122_16215 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D OF122_07465 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D OF122_07470 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D OF122_07460 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D OF122_06715 glgP; alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D OF122_07455 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D OF122_07480 glgX; glycogen debranching protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D OF122_05790 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D OF122_05795 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D OF122_07475 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D OF122_10510 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D OF122_03805 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pem00520] D OF122_08125 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D OF122_05450 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D OF122_16980 ROK family protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59] D OF122_17965 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D OF122_17805 N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8] D OF122_03805 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D OF122_10580 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D OF122_17970 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D OF122_04585 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D OF122_10575 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D OF122_17980 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D OF122_19265 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D OF122_16360 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D OF122_02280 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D OF122_07680 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D OF122_14015 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D OF122_12570 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3] D OF122_01990 tviB; Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D OF122_01545 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D OF122_13650 SDR family oxidoreductase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D OF122_00170 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D OF122_13655 galE; UDP-glucose 4-epimerase GalE K12448 UXE; UDP-arabinose 4-epimerase [EC:5.1.3.5] D OF122_07475 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D OF122_03890 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D OF122_01595 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D OF122_13665 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D OF122_14265 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D OF122_03895 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D OF122_01600 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D OF122_01995 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D OF122_19235 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D OF122_10510 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D OF122_02500 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D OF122_02505 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D OF122_07465 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:pem00620] D OF122_08115 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D OF122_09205 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D OF122_10830 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D OF122_10825 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D OF122_10820 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D OF122_01255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_10810 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_08910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D OF122_04230 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D OF122_03270 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D OF122_09965 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D OF122_09960 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D OF122_19290 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D OF122_07015 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D OF122_14405 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D OF122_06705 hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D OF122_17045 dld; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D OF122_11555 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D OF122_03045 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D OF122_17585 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D OF122_09835 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D OF122_02730 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D OF122_01225 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D OF122_02780 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D OF122_19215 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D OF122_15615 PEP-utilizing enzyme K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D OF122_05730 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D OF122_04185 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05235 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_08070 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D OF122_14445 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pem00630] D OF122_00195 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D OF122_08115 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D OF122_09205 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D OF122_05730 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D OF122_01225 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D OF122_11005 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D OF122_00735 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D OF122_04185 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05235 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05835 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D OF122_05825 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D OF122_05820 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D OF122_05830 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D OF122_07600 katA; catalase K03781 katE; catalase [EC:1.11.1.6] D OF122_07220 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D OF122_19500 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D OF122_17585 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D OF122_09480 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D OF122_10130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D OF122_11820 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D OF122_15840 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D OF122_15835 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D OF122_15850 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D OF122_01255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_10810 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_15845 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D OF122_05260 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D OF122_03835 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D OF122_01460 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9] D OF122_05435 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:pem00640] D OF122_08115 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D OF122_09205 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D OF122_12025 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D OF122_12020 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D OF122_12015 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D OF122_01255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_10810 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_05815 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D OF122_04180 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D OF122_03270 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D OF122_09965 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D OF122_09960 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D OF122_19290 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D OF122_12205 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D OF122_05590 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D OF122_05825 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D OF122_05820 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D OF122_05835 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D OF122_05830 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D OF122_01230 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D OF122_01235 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D OF122_05595 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D OF122_16875 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D OF122_02685 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:pem00650] D OF122_04185 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05235 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_04180 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D OF122_17015 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D OF122_17020 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D OF122_01195 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D OF122_01200 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D OF122_01185 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D OF122_01190 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D OF122_12205 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D OF122_01455 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_03785 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_12200 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_14685 iron-containing alcohol dehydrogenase K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61] D OF122_05275 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D OF122_03980 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D OF122_07980 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D OF122_12215 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D OF122_07985 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:pem00660] D OF122_07980 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D OF122_12215 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D OF122_07985 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D OF122_01230 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D OF122_01235 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D OF122_18475 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D OF122_00955 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D OF122_01100 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D OF122_01110 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D OF122_10955 isocitrate/isopropylmalate dehydrogenase family protein K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:pem00562] D OF122_04390 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D OF122_15985 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D OF122_16935 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D OF122_16950 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D OF122_01745 sugar phosphate isomerase/epimerase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D OF122_16945 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D OF122_16955 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D OF122_16940 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D OF122_05595 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D OF122_16875 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D OF122_10865 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:pem00190] D OF122_11175 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D OF122_11170 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D OF122_11165 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D OF122_11160 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D OF122_11155 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D OF122_11150 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D OF122_11145 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D OF122_11140 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D OF122_11135 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D OF122_11130 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D OF122_11125 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D OF122_06925 proton-conducting transporter membrane subunit K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D OF122_11120 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D OF122_11115 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D OF122_11110 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D OF122_15395 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D OF122_01195 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D OF122_01200 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D OF122_01185 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D OF122_01190 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D OF122_05905 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D OF122_06745 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D OF122_05910 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D OF122_05915 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D OF122_15920 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D OF122_15905 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D OF122_15925 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D OF122_09090 ctaD; cytochrome c oxidase subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9] D OF122_16650 ctaD; cytochrome c oxidase subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9] D OF122_15930 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D OF122_16660 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D OF122_15910 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D OF122_11675 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D OF122_02275 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D OF122_14020 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D OF122_02270 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D OF122_14025 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D OF122_02265 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D OF122_14030 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D OF122_02260 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D OF122_14035 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D OF122_09095 coxB; cytochrome c oxidase subunit II K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5] D OF122_05400 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D OF122_05405 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D OF122_05410 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D OF122_01290 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D OF122_01300 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D OF122_01295 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D OF122_01285 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D OF122_01305 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D OF122_15805 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D OF122_15815 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D OF122_15820 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D OF122_15810 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D OF122_00960 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D OF122_09810 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D OF122_16830 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:pem00710] D OF122_04415 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D OF122_04420 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D OF122_06695 type II glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D OF122_04410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D OF122_09235 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D OF122_11630 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D OF122_04425 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D OF122_14510 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D OF122_10865 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D OF122_08605 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D OF122_16225 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D OF122_19215 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D OF122_15615 PEP-utilizing enzyme K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D OF122_09835 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D OF122_01225 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:pem00720] D OF122_15615 PEP-utilizing enzyme K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D OF122_02730 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D OF122_01225 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D OF122_02780 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D OF122_01195 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D OF122_01200 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D OF122_01185 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D OF122_01190 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D OF122_01235 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D OF122_01230 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D OF122_04185 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05235 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_08455 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D OF122_00735 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D OF122_03270 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D OF122_09965 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D OF122_09960 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D OF122_19290 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D OF122_05835 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D OF122_05830 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D OF122_05440 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D OF122_07615 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D OF122_08115 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D OF122_09205 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:pem00680] D OF122_08910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D OF122_11820 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D OF122_05260 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D OF122_10840 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D OF122_01225 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D OF122_04410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D OF122_09235 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D OF122_11630 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D OF122_03140 twin-arginine translocation signal domain-containing protein K15228 mauA; methylamine dehydrogenase light chain [EC:1.4.9.1] D OF122_03155 hypothetical protein K15229 mauB; methylamine dehydrogenase heavy chain [EC:1.4.9.1] D OF122_08115 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D OF122_09205 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D OF122_00445 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D OF122_04630 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D OF122_04625 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D OF122_07935 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D OF122_17155 cofE; coenzyme F420-0:L-glutamate ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] C 00910 Nitrogen metabolism [PATH:pem00910] D OF122_05195 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D OF122_05200 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D OF122_05205 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D OF122_05220 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D OF122_05210 nirB; nitrite reductase large subunit NirB K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D OF122_05215 nirD; nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4] D OF122_02290 nirK; copper-containing nitrite reductase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D OF122_14005 nirK; copper-containing nitrite reductase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D OF122_14075 nirK; copper-containing nitrite reductase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D OF122_05320 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D OF122_00965 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D OF122_13975 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D OF122_10130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D OF122_03915 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D OF122_03910 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D OF122_06640 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D OF122_01155 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:pem00920] D OF122_04865 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D OF122_11365 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D OF122_11370 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D OF122_02510 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D OF122_08200 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D OF122_08195 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D OF122_05570 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D OF122_14755 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D OF122_08750 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D OF122_11380 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D OF122_08260 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D OF122_16710 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D OF122_05250 crotonase/enoyl-CoA hydratase family protein K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:pem00061] D OF122_03270 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D OF122_09965 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D OF122_09960 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D OF122_19290 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D OF122_13400 acyl carrier protein K02078 acpP; acyl carrier protein D OF122_13410 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D OF122_11765 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D OF122_19605 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D OF122_08465 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D OF122_13395 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D OF122_13405 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D OF122_07180 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D OF122_19600 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D OF122_11025 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D OF122_15485 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D OF122_04170 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:pem00071] D OF122_04185 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05235 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_04180 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D OF122_04175 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D OF122_16590 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D OF122_04170 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D OF122_08910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:pem00561] D OF122_05260 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D OF122_16290 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D OF122_11770 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D OF122_09685 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D OF122_03010 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D OF122_08155 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D OF122_14265 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D OF122_15365 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:pem00564] D OF122_01050 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D OF122_13495 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D OF122_09685 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D OF122_03010 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D OF122_03925 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5] D OF122_18390 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D OF122_11045 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D OF122_06075 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D OF122_11385 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:pem00600] D OF122_15365 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] D OF122_05450 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D OF122_06235 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:pem00230] D OF122_17670 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D OF122_07475 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D OF122_06000 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D OF122_06655 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D OF122_13455 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D OF122_16005 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D OF122_09790 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D OF122_08545 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D OF122_08560 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D OF122_08550 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D OF122_09795 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D OF122_04310 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D OF122_04315 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D OF122_08565 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D OF122_08600 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D OF122_01090 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D OF122_05925 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D OF122_05640 5'-nucleotidase/apyrase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D OF122_10355 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D OF122_17695 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D OF122_01095 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D OF122_06005 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D OF122_13770 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D OF122_13310 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D OF122_00400 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D OF122_08650 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D OF122_05705 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D OF122_05710 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D OF122_13710 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D OF122_05725 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D OF122_13380 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D OF122_09940 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D OF122_10310 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D OF122_15600 HD family hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D OF122_11930 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D OF122_09815 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D OF122_13815 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D OF122_04640 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D OF122_09840 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D OF122_05740 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D OF122_06355 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D OF122_04465 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D OF122_09430 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D OF122_10735 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D OF122_11365 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D OF122_11370 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D OF122_05700 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D OF122_05695 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5] D OF122_12610 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5] D OF122_12605 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D OF122_05675 bifunctional allantoicase/(S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D OF122_05670 ureidoglycolate lyase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D OF122_13625 fumarylacetoacetate hydrolase family protein K16856 ugl; ureidoglycolate lyase [EC:4.3.2.3] D OF122_19090 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D OF122_19080 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D OF122_19070 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D OF122_06640 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:pem00240] D OF122_06305 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D OF122_06365 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D OF122_09695 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D OF122_09690 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D OF122_15590 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D OF122_18565 amidohydrolase/deacetylase family metallohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3] D OF122_16510 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D OF122_11925 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D OF122_00435 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D OF122_11060 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D OF122_13310 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D OF122_10735 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D OF122_00580 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D OF122_16330 Maf family nucleotide pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D OF122_10855 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D OF122_19400 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D OF122_05640 5'-nucleotidase/apyrase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D OF122_10355 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D OF122_17665 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D OF122_06355 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D OF122_04465 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D OF122_12070 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D OF122_17700 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D OF122_16705 2'-deoxycytidine 5'-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D OF122_09940 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D OF122_15600 HD family hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D OF122_10620 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D OF122_19620 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D OF122_06670 thymidine phosphorylase family protein K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D OF122_17675 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D OF122_06240 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D OF122_07855 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D OF122_05605 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D OF122_05600 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:pem00250] D OF122_06260 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_18335 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_16230 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D OF122_03845 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D OF122_07485 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D OF122_00895 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D OF122_02975 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D OF122_17285 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D OF122_04640 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D OF122_08600 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D OF122_09695 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D OF122_12205 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D OF122_01455 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_03785 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_12200 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_03915 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D OF122_03910 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D OF122_00965 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D OF122_13975 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D OF122_15585 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D OF122_10130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D OF122_06305 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D OF122_06365 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D OF122_08550 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D OF122_10580 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D OF122_17970 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D OF122_13455 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:pem00260] D OF122_03365 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D OF122_18730 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D OF122_01135 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D OF122_11635 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D OF122_15890 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D OF122_06285 ltaE; low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D OF122_11820 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D OF122_17585 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D OF122_05260 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D OF122_00445 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D OF122_04630 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D OF122_04625 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D OF122_07935 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D OF122_15575 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D OF122_15570 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D OF122_16410 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D OF122_15840 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D OF122_15835 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D OF122_15850 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D OF122_01255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_10810 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_15845 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D OF122_04690 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D OF122_15005 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D OF122_17115 eutB; hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D OF122_01315 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D OF122_19295 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D OF122_19330 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D OF122_18745 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D OF122_18750 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D OF122_18740 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] D OF122_18735 thpD; ectoine hydroxylase K10674 ectD; ectoine hydroxylase [EC:1.14.11.55] D OF122_17125 M24 family metallopeptidase K15783 doeA; ectoine hydrolase [EC:3.5.4.44] D OF122_17070 aspartate aminotransferase family protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] D OF122_17080 NAD-dependent succinate-semialdehyde dehydrogenase K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-] C 00270 Cysteine and methionine metabolism [PATH:pem00270] D OF122_08750 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D OF122_11380 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D OF122_11415 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D OF122_05430 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D OF122_19030 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D OF122_06005 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D OF122_12840 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D OF122_13130 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D OF122_19250 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D OF122_03365 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D OF122_18730 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D OF122_01135 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D OF122_11635 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D OF122_08260 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D OF122_16710 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D OF122_06060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D OF122_15965 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D OF122_00375 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D OF122_06260 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_18335 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_16230 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D OF122_05570 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D OF122_14755 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D OF122_01315 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D OF122_01225 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D OF122_04690 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D OF122_04630 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D OF122_04625 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:pem00280] D OF122_06060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D OF122_12025 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D OF122_12020 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D OF122_12015 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D OF122_01255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_10810 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_12010 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D OF122_04180 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D OF122_05825 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D OF122_05820 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D OF122_05835 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D OF122_05830 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D OF122_05595 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D OF122_16875 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D OF122_05590 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D OF122_12205 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D OF122_12000 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D OF122_12005 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D OF122_05275 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D OF122_04185 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05235 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pem00290] D OF122_15005 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D OF122_17115 eutB; hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D OF122_00955 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D OF122_01100 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D OF122_01110 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D OF122_10955 isocitrate/isopropylmalate dehydrogenase family protein K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D OF122_07980 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D OF122_12215 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D OF122_07985 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D OF122_08020 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D OF122_13980 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D OF122_15125 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D OF122_06060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D OF122_08070 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D OF122_14445 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:pem00300] D OF122_11635 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D OF122_03365 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D OF122_18730 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D OF122_01135 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D OF122_02840 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D OF122_11955 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D OF122_00440 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D OF122_17505 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D OF122_16740 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D OF122_17510 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D OF122_00785 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D OF122_02980 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D OF122_07650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D OF122_07655 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:pem00310] D OF122_04160 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D OF122_18330 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D OF122_01245 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D OF122_01255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_10810 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_16590 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D OF122_04180 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D OF122_04185 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05235 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_01315 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D OF122_12165 aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D OF122_12205 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D OF122_01455 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_03785 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_12200 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_18325 VOC family protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D OF122_14390 FAD-binding oxidoreductase K26064 amaD; D-lysine oxidase D OF122_01685 Ldh family oxidoreductase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21] D OF122_08990 Ldh family oxidoreductase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21] D OF122_18285 FAD-binding oxidoreductase K26065 amaA; L-pipecolate oxidase D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:pem00220] D OF122_16735 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D OF122_00895 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D OF122_02975 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D OF122_17285 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D OF122_10450 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D OF122_10640 biotin-dependent carboxyltransferase family protein K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D OF122_19090 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D OF122_19080 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D OF122_19070 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D OF122_08550 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D OF122_10130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D OF122_06305 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D OF122_06365 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D OF122_06640 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D OF122_00965 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D OF122_13975 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D OF122_06260 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_18335 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_16230 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D OF122_03295 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D OF122_17485 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D OF122_11645 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D OF122_16740 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D OF122_17130 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:pem00330] D OF122_03855 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D OF122_01695 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D OF122_01700 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D OF122_05020 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D OF122_09460 hypothetical protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D OF122_14295 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D OF122_12165 aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D OF122_00235 NAD(P)/FAD-dependent oxidoreductase K24954 ooxA; octopine oxidase subunit A D OF122_00245 FAD-binding oxidoreductase K24955 ooxB; octopine oxidase subunit B D OF122_10450 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D OF122_10455 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D OF122_06035 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D OF122_15585 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D OF122_01360 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D OF122_01355 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D OF122_06260 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_18335 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_16230 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D OF122_08995 proline racemase family protein K22548 lhpL; trans-L-3-hydroxyproline dehydratase [EC:4.2.1.77] D OF122_09000 aconitase family protein K09123 lhpI; cis-L-3-hydroxyproline dehydratase [EC:4.2.1.171] C 00340 Histidine metabolism [PATH:pem00340] D OF122_16110 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D OF122_16115 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D OF122_00480 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D OF122_08820 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D OF122_00490 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D OF122_00500 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D OF122_00485 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D OF122_00510 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D OF122_02520 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D OF122_03085 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D OF122_16350 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:pem00350] D OF122_06260 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_18335 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_16230 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D OF122_02520 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D OF122_03085 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D OF122_14470 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D OF122_08910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D OF122_01845 4-hydroxyphenylacetate 3-monooxygenase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D OF122_01455 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_03785 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_12200 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_00725 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:pem00360] D OF122_06260 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_18335 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_16230 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D OF122_02520 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D OF122_03085 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:pem00380] D OF122_01460 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9] D OF122_01245 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D OF122_01255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_10810 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_16590 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D OF122_04180 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D OF122_04185 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05235 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D OF122_05320 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D OF122_07600 katA; catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pem00400] D OF122_14495 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D OF122_03250 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D OF122_04955 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D OF122_09970 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D OF122_04920 sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D OF122_04930 shikimate dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24] D OF122_00575 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D OF122_03255 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D OF122_19405 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D OF122_15470 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D OF122_10875 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D OF122_10880 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D OF122_10890 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D OF122_19335 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D OF122_10895 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D OF122_19295 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D OF122_19330 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D OF122_03090 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D OF122_17575 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D OF122_06260 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_18335 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_16230 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D OF122_02520 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D OF122_03085 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:pem00410] D OF122_12205 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D OF122_12165 aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D OF122_09155 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D OF122_05605 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D OF122_05600 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D OF122_05590 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D OF122_04180 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D OF122_05595 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D OF122_16875 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:pem00430] D OF122_14275 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D OF122_18500 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D OF122_07485 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D OF122_00965 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism D OF122_10600 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:pem00450] D OF122_11415 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D OF122_05430 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D OF122_10055 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D OF122_06270 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D OF122_08205 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D OF122_11365 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D OF122_11370 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D OF122_10610 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:pem00460] D OF122_16215 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D OF122_05320 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D OF122_14275 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D OF122_18500 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D OF122_11820 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:pem00470] D OF122_13440 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D OF122_07685 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D OF122_01315 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D OF122_08550 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D OF122_00785 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D OF122_02980 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D OF122_17310 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D OF122_17325 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D OF122_12135 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00480 Glutathione metabolism [PATH:pem00480] D OF122_14275 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D OF122_18500 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D OF122_03105 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D OF122_10635 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D OF122_15965 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D OF122_00375 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D OF122_13345 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D OF122_17590 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D OF122_02200 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D OF122_07555 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D OF122_07815 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D OF122_10415 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D OF122_14530 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D OF122_19555 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D OF122_14500 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D OF122_08455 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D OF122_08725 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D OF122_17800 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D OF122_15860 redoxin family protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D OF122_09460 hypothetical protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:pem00511] D OF122_05450 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D OF122_14815 glycoside hydrolase family 2 protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] C 00540 Lipopolysaccharide biosynthesis [PATH:pem00540] D OF122_11020 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D OF122_07715 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D OF122_11030 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D OF122_11015 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D OF122_11010 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D OF122_01125 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pem00541] D OF122_03890 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D OF122_03895 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D OF122_01595 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D OF122_13665 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D OF122_01600 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D OF122_01995 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D OF122_02075 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D OF122_02085 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D OF122_02090 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D OF122_02080 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D OF122_02500 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D OF122_02505 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D OF122_10575 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D OF122_01990 tviB; Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:pem00550] D OF122_16360 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D OF122_02280 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D OF122_07680 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D OF122_14015 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D OF122_07675 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D OF122_05850 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K23169 murD2; UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:6.3.2.53] D OF122_05855 hypothetical protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23] D OF122_07650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D OF122_07685 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D OF122_07655 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D OF122_11050 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D OF122_06050 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D OF122_14340 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D OF122_07660 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D OF122_07670 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D OF122_02770 transglycosylase domain-containing protein K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D OF122_00040 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D OF122_09995 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D OF122_15205 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D OF122_07645 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D OF122_10625 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:pem00552] D OF122_06050 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D OF122_14340 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:pem00543] D OF122_08750 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:pem00730] D OF122_10030 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D OF122_04245 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D OF122_04405 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D OF122_14960 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D OF122_04665 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D OF122_09430 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:pem00740] D OF122_15465 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D OF122_11810 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D OF122_11800 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D OF122_11805 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D OF122_16055 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D OF122_14110 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:pem00750] D OF122_15420 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D OF122_17055 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D OF122_04625 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D OF122_13370 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D OF122_07990 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D OF122_15890 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:pem00760] D OF122_03845 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D OF122_03840 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D OF122_14410 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D OF122_07965 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D OF122_17695 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D OF122_01095 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D OF122_05640 5'-nucleotidase/apyrase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D OF122_10355 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D OF122_01350 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D OF122_10735 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D OF122_14485 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D OF122_10790 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D OF122_07960 pncA; bifunctional nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D OF122_08870 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D OF122_04275 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D OF122_04280 proton-translocating transhydrogenase family protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D OF122_04285 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D OF122_08980 isochorismatase family protein K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107] D OF122_01455 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_03785 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D OF122_12200 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:pem00770] D OF122_07980 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D OF122_12215 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D OF122_07985 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D OF122_08020 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D OF122_13980 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D OF122_15125 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D OF122_09150 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D OF122_09155 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D OF122_00475 coaA; type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D OF122_19630 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D OF122_10735 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D OF122_10485 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D OF122_00570 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D OF122_11920 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D OF122_06060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D OF122_05605 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D OF122_05600 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:pem00780] D OF122_19605 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D OF122_08465 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D OF122_13395 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D OF122_13405 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D OF122_11025 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D OF122_15485 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D OF122_11105 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:pem00785] D OF122_09515 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D OF122_10800 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D OF122_01255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_10810 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_10830 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D OF122_10825 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D OF122_10820 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D OF122_01240 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D OF122_01245 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D OF122_12025 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D OF122_12020 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D OF122_12015 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D OF122_15840 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D OF122_15835 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D OF122_15850 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D OF122_15845 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:pem00790] D OF122_08825 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D OF122_14960 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D OF122_18385 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D OF122_09495 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D OF122_09490 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D OF122_09500 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D OF122_19285 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D OF122_15465 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D OF122_01000 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D OF122_14515 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D OF122_10900 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D OF122_06065 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D OF122_15745 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D OF122_10905 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:pem00670] D OF122_05440 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D OF122_11820 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D OF122_09790 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D OF122_01090 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D OF122_17535 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D OF122_15850 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D OF122_05430 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D OF122_07855 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D OF122_05435 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D OF122_07615 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D OF122_04460 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:pem00860] D OF122_16410 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D OF122_11000 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D OF122_14480 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D OF122_11845 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D OF122_01040 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D OF122_01035 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D OF122_00585 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D OF122_05895 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D OF122_14100 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D OF122_00590 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D OF122_09100 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D OF122_03870 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D OF122_05225 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D OF122_08185 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D OF122_17830 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D OF122_15920 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D OF122_11675 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D OF122_14315 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D OF122_14305 hypothetical protein K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D OF122_14320 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D OF122_14330 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D OF122_14300 cobF; precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D OF122_17835 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D OF122_14325 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D OF122_14310 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D OF122_17825 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D OF122_17865 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D OF122_03230 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D OF122_03225 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D OF122_02940 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D OF122_17860 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D OF122_17820 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D OF122_17815 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D OF122_17810 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D OF122_14540 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D OF122_14535 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D OF122_03510 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pem00130] D OF122_05245 acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D OF122_15975 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D OF122_14115 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D OF122_14110 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D OF122_03360 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D OF122_00680 FAD-dependent monooxygenase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D OF122_10710 FAD-dependent monooxygenase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D OF122_19640 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D OF122_17075 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D OF122_05930 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:pem00900] D OF122_04245 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D OF122_10785 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D OF122_15695 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D OF122_02745 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D OF122_15620 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D OF122_04185 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05235 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_14110 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D OF122_02765 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D OF122_15655 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D OF122_11050 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:pem00906] D OF122_10395 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:pem00907] D OF122_04180 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D OF122_04425 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics [PATH:pem01059] D OF122_18455 epoxide hydrolase K21159 sgcF; epoxide hydrolase C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:pem00523] D OF122_02075 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D OF122_02085 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D OF122_02090 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D OF122_02080 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D OF122_09765 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics D OF122_02085 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:pem00946] D OF122_16215 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:pem00332] D OF122_01360 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D OF122_01355 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:pem00261] D OF122_11365 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D OF122_11370 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D OF122_03365 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D OF122_18730 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D OF122_01135 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D OF122_02840 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D OF122_11955 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D OF122_00440 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:pem00521] D OF122_07475 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D OF122_04390 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D OF122_15985 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D OF122_16935 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D OF122_02075 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D OF122_02085 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D OF122_02090 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D OF122_02080 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:pem00525] D OF122_02075 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D OF122_02085 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:pem00401] D OF122_03090 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D OF122_06260 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_18335 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_16230 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D OF122_02520 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D OF122_03085 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis [PATH:pem00405] D OF122_08055 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D OF122_14585 flavin-dependent oxidoreductase K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218] D OF122_10875 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D OF122_10880 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D OF122_13410 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D OF122_13405 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D OF122_15485 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D OF122_13400 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:pem00999] D OF122_19030 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D OF122_00575 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D OF122_16215 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:pem00362] D OF122_09125 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D OF122_15360 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D OF122_17025 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D OF122_03775 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D OF122_09140 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D OF122_09135 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D OF122_09145 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D OF122_00050 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D OF122_09130 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D OF122_18540 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] D OF122_10960 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8] D OF122_18470 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8] D OF122_18480 PIG-L family deacetylase K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83] D OF122_18475 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D OF122_08170 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S D OF122_08210 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S D OF122_09110 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D OF122_05245 acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D OF122_04180 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D OF122_16590 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D OF122_04185 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05235 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:pem00627] D OF122_05320 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D OF122_14110 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D OF122_05180 aromatic ring-hydroxylating dioxygenase subunit alpha K03862 vanA; vanillate monooxygenase [EC:1.14.13.82] D OF122_05170 PDR/VanB family oxidoreductase K03863 vanB; vanillate monooxygenase ferredoxin subunit D OF122_18540 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:pem00625] D OF122_08910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D OF122_17685 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D OF122_08985 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D OF122_17660 HAD family phosphatase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pem00361] D OF122_03775 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D OF122_08985 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D OF122_17660 HAD family phosphatase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation [PATH:pem00622] D OF122_03775 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:pem00643] D OF122_14470 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D OF122_05320 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D OF122_03775 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D OF122_17015 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D OF122_17020 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation [PATH:pem00791] D OF122_10640 biotin-dependent carboxyltransferase family protein K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D OF122_19090 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D OF122_19080 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D OF122_19070 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:pem00930] D OF122_04180 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation D OF122_14640 2,4'-dihydroxyacetophenone dioxygenase family protein K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41] C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:pem00626] D OF122_08910 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D OF122_09140 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D OF122_09135 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:pem03020] D OF122_09285 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D OF122_09290 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D OF122_09445 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D OF122_11935 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:pem03010] D OF122_19395 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D OF122_11070 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D OF122_09355 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D OF122_08500 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D OF122_09410 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D OF122_13420 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D OF122_09305 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D OF122_09395 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D OF122_11665 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D OF122_09320 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D OF122_09440 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D OF122_09300 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D OF122_09435 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D OF122_09390 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D OF122_19525 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D OF122_00795 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D OF122_09370 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D OF122_13425 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D OF122_09345 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D OF122_19650 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D OF122_04305 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D OF122_09270 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D OF122_09340 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D OF122_09325 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D OF122_09330 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D OF122_09385 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D OF122_09400 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D OF122_09280 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D OF122_13430 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D OF122_09275 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D OF122_09265 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D OF122_11670 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D OF122_09375 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D OF122_09420 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D OF122_09360 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D OF122_09450 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D OF122_09405 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D OF122_00810 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D OF122_18640 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D OF122_01385 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D OF122_09350 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D OF122_09335 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D OF122_09380 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D OF122_05990 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D OF122_01380 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D OF122_03205 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D OF122_09365 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D OF122_09415 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D OF122_04370 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D OF122_02775 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D OF122_09660 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D OF122_17435 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D OF122_18635 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D OF122_04225 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D OF122_03430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D OF122_03445 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D OF122_03450 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:pem00970] D OF122_03440 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D OF122_11985 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D OF122_19415 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D OF122_18940 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D OF122_03035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D OF122_11230 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D OF122_11500 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D OF122_17420 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D OF122_11225 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D OF122_10230 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D OF122_11215 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D OF122_13825 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D OF122_15380 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D OF122_11565 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D OF122_11570 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D OF122_00700 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D OF122_08935 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D OF122_16685 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D OF122_16145 tRNA-His K14226 tRNA-His; tRNA His D OF122_03435 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D OF122_08660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D OF122_09525 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D OF122_10140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D OF122_19570 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D OF122_02885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D OF122_10565 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D OF122_08090 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D OF122_06440 tRNA-Ile K14230 tRNA-Met; tRNA Met D OF122_04830 tRNA-Met K14230 tRNA-Met; tRNA Met D OF122_03555 tRNA-Met K14230 tRNA-Met; tRNA Met D OF122_16320 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D OF122_11425 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D OF122_11720 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D OF122_15385 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D OF122_18095 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D OF122_01400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D OF122_10690 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D OF122_12860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D OF122_16365 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D OF122_01020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D OF122_08880 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D OF122_09250 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D OF122_08930 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D OF122_03945 tRNA-Val K14237 tRNA-Val; tRNA Val D OF122_03950 tRNA-Val K14237 tRNA-Val; tRNA Val D OF122_10190 tRNA-Val K14237 tRNA-Val; tRNA Val D OF122_11000 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D OF122_14480 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D OF122_01835 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D OF122_09740 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D OF122_18595 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D OF122_09775 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D OF122_09730 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D OF122_08450 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D OF122_09825 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D OF122_15675 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D OF122_15635 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D OF122_08845 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D OF122_10350 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D OF122_14465 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D OF122_04080 endo alpha-1,4 polygalactosaminidase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D OF122_10610 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D OF122_17535 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D OF122_10285 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D OF122_00635 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D OF122_16050 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D OF122_16540 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D OF122_10315 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D OF122_11090 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D OF122_16120 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D OF122_18645 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D OF122_18655 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D OF122_10020 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D OF122_00130 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:pem03060] D OF122_09425 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D OF122_09255 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D OF122_10860 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D OF122_10385 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D OF122_10380 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D OF122_17445 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D OF122_03325 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D OF122_00560 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D OF122_00790 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D OF122_17570 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D OF122_00770 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D OF122_10335 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D OF122_10345 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D OF122_11915 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D OF122_07165 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D OF122_16045 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:pem04122] D OF122_10030 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D OF122_05570 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D OF122_14755 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D OF122_02805 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D OF122_04800 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D OF122_06065 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D OF122_14515 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D OF122_06070 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D OF122_10900 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D OF122_15745 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] C 03050 Proteasome C 03018 RNA degradation [PATH:pem03018] D OF122_01320 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D OF122_09985 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D OF122_10840 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D OF122_19520 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D OF122_11495 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D OF122_09670 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D OF122_03415 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D OF122_17235 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D OF122_00595 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D OF122_11100 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D OF122_00420 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D OF122_16095 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D OF122_10745 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D OF122_09810 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D OF122_16830 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D OF122_05885 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:pem03030] D OF122_00565 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D OF122_11075 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D OF122_17565 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D OF122_10615 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D OF122_00625 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D OF122_13330 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D OF122_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D OF122_13435 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D OF122_06380 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D OF122_10430 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D OF122_15625 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D OF122_15765 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D OF122_18625 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D OF122_07730 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:pem03410] D OF122_00465 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D OF122_15775 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D OF122_09560 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D OF122_19645 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D OF122_02925 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D OF122_16130 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D OF122_04825 UdgX family uracil-DNA binding protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D OF122_11945 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D OF122_15710 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D OF122_00655 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D OF122_10295 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D OF122_18625 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D OF122_11620 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D OF122_07730 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:pem03420] D OF122_10720 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D OF122_10425 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D OF122_06140 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D OF122_06080 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D OF122_07250 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D OF122_07805 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D OF122_06475 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D OF122_18625 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D OF122_07730 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:pem03430] D OF122_00145 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D OF122_16020 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D OF122_07250 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D OF122_07805 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D OF122_06475 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D OF122_16000 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D OF122_15440 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D OF122_11620 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D OF122_10430 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D OF122_11075 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D OF122_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D OF122_17565 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D OF122_00625 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D OF122_10615 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D OF122_00565 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D OF122_13330 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D OF122_07730 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:pem03440] D OF122_11620 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D OF122_10430 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D OF122_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D OF122_11900 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D OF122_17555 recR; recombination mediator RecR K06187 recR; recombination protein RecR D OF122_08445 recA; recombinase RecA K03553 recA; recombination protein RecA D OF122_18625 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D OF122_04485 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D OF122_04490 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D OF122_04480 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D OF122_10730 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D OF122_11075 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D OF122_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D OF122_17565 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D OF122_00625 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D OF122_10615 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D OF122_00565 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D OF122_13330 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D OF122_01275 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:pem03450] D OF122_09045 Ku protein K10979 ku; DNA end-binding protein Ku D OF122_09050 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication D OF122_18145 hypothetical protein K21313 1; Autographiviridae RNA polymerase [EC:2.7.7.6] C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:pem02010] D OF122_05195 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D OF122_05200 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D OF122_05205 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D OF122_04865 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D OF122_03825 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D OF122_03820 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D OF122_01930 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D OF122_03675 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D OF122_05065 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D OF122_16160 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D OF122_01920 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D OF122_05070 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D OF122_16165 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D OF122_01925 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D OF122_05055 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D OF122_16155 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D OF122_04660 thiB; thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D OF122_04655 hypothetical protein K02063 thiP; thiamine transport system permease protein D OF122_04650 ATP-binding cassette domain-containing protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D OF122_12550 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D OF122_12540 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D OF122_12545 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D OF122_12535 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D OF122_03505 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D OF122_03490 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein D OF122_03495 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein D OF122_03500 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D OF122_02715 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D OF122_16700 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D OF122_16695 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D OF122_16690 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D OF122_05500 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D OF122_05505 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D OF122_05515 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D OF122_05510 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D OF122_18005 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_18045 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_01500 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_11475 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_12500 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_14655 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_17290 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_17360 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_17985 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D OF122_17990 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D OF122_17995 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D OF122_13520 ABC transporter substrate-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein D OF122_13515 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein D OF122_13510 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein D OF122_13505 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10191 lacK; lactose/L-arabinose transport system ATP-binding protein D OF122_18060 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D OF122_18055 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D OF122_18050 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein D OF122_16195 ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein D OF122_16190 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein D OF122_16185 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein D OF122_17345 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein D OF122_17335 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D OF122_17340 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D OF122_17190 chvE; sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D OF122_17180 gguB; sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D OF122_17185 gguA; sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_12145 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D OF122_12155 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D OF122_12150 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D OF122_05745 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D OF122_17720 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D OF122_05755 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D OF122_17710 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D OF122_05750 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D OF122_17705 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D OF122_05760 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D OF122_17715 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D OF122_11490 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D OF122_11485 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D OF122_11480 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D OF122_01425 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_01750 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_05785 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_13610 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_13890 sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_13900 sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_01735 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_16895 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_01430 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_01765 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_05780 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_13615 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_13880 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_13910 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_16900 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_01435 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D OF122_05775 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D OF122_13885 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D OF122_01760 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D OF122_15040 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D OF122_15050 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D OF122_15055 yjfF; sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein D OF122_15045 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D OF122_08895 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D OF122_08900 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D OF122_08905 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D OF122_13605 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D OF122_13565 sugar ABC transporter substrate-binding protein K10552 frcB; fructose transport system substrate-binding protein D OF122_13560 ABC transporter permease K10553 frcC; fructose transport system permease protein D OF122_13555 ATP-binding cassette domain-containing protein K10554 frcA; fructose transport system ATP-binding protein D OF122_16620 rhaS; rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D OF122_16630 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein D OF122_16635 ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein D OF122_16625 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D OF122_18405 extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D OF122_19140 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D OF122_18400 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D OF122_19145 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D OF122_18395 ABC transporter permease subunit K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D OF122_19150 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D OF122_18375 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D OF122_19155 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D OF122_16820 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D OF122_16815 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D OF122_16810 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D OF122_16805 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D OF122_01915 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D OF122_11390 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D OF122_11410 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D OF122_11405 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein D OF122_11400 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D OF122_11395 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D OF122_09020 transporter substrate-binding domain-containing protein K23061 lhpP; hydroxyproline transporter system substrate-binding protein D OF122_09015 amino acid ABC transporter permease K23062 lhpM; hydroxyproline transport system permease protein D OF122_09010 amino acid ABC transporter permease K23063 lhpN; hydroxyproline transport system permease protein D OF122_09005 amino acid ABC transporter ATP-binding protein K23064 lhpO; hydroxyproline transport system ATP-binding protein [EC:7.4.2.1] D OF122_02710 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_03965 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_09180 substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_11510 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_08950 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_01815 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_02700 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_03960 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_09185 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_11525 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_01875 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_08955 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_02705 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_03955 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_08960 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_11530 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_01880 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_01805 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_01885 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_02690 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_03975 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_08940 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_09195 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_11515 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_01800 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_01890 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_02695 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_03970 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_08945 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_09200 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_11520 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_19040 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D OF122_19045 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D OF122_19050 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D OF122_19055 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D OF122_19060 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D OF122_04190 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D OF122_04195 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D OF122_04200 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D OF122_04205 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D OF122_04210 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D OF122_18875 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D OF122_14385 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D OF122_14370 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D OF122_14375 ABC transporter permease K13895 yejE; microcin C transport system permease protein D OF122_14380 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D OF122_11590 ABC transporter substrate-binding protein K25287 desE; iron-desferrioxamine transport system substrate-binding protein D OF122_06215 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D OF122_11595 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D OF122_11610 iron chelate uptake ABC transporter family permease subunit K23186 fepD; iron-siderophore transport system permease protein D OF122_11605 fepG; iron-enterobactin ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D OF122_11600 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D OF122_17910 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein D OF122_17920 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D OF122_17915 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D OF122_05300 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D OF122_05290 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D OF122_05285 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein D OF122_05295 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D OF122_03060 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D OF122_15405 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D OF122_09870 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D OF122_11085 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D OF122_11080 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D OF122_00755 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D OF122_00750 heme ABC transporter permease K02195 ccmC; heme exporter protein C D OF122_00745 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D OF122_00740 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D OF122_13350 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein D OF122_13355 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein D OF122_19590 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D OF122_03540 ABC transporter ATP-binding protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-] D OF122_03005 ABC transporter permease K09811 ftsX; cell division transport system permease protein D OF122_03000 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D OF122_06175 ABC transporter ATP-binding protein/permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D OF122_06170 ABC transporter ATP-binding protein/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D OF122_14430 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D OF122_14825 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D OF122_14830 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D OF122_04060 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D OF122_14220 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D OF122_05390 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D OF122_05395 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:pem02060] D OF122_19240 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D OF122_19235 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D OF122_03370 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D OF122_19475 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:pem03070] D OF122_10275 TolC family outer membrane protein K12340 tolC; outer membrane protein D OF122_10385 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D OF122_09255 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D OF122_10860 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D OF122_09425 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D OF122_10380 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D OF122_17445 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D OF122_03325 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D OF122_00770 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D OF122_00560 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D OF122_00790 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D OF122_10335 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D OF122_10345 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:pem02020] D OF122_16825 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D OF122_16795 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D OF122_14960 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D OF122_18385 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D OF122_16820 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D OF122_14855 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D OF122_08300 flagellin K02406 fliC; flagellin D OF122_10550 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D OF122_10975 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D OF122_01910 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD D OF122_03685 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD D OF122_10980 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD D OF122_03700 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D OF122_07205 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D OF122_03690 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D OF122_10970 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D OF122_11675 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D OF122_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D OF122_19225 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D OF122_19220 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D OF122_11990 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D OF122_14365 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D OF122_17635 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D OF122_17640 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D OF122_17625 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D OF122_17620 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D OF122_17615 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D OF122_17610 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D OF122_17605 type II secretion system F family protein K12510 tadB; tight adherence protein B D OF122_17600 type II secretion system F family protein K12511 tadC; tight adherence protein C D OF122_19425 pilus assembly protein TadG-related protein K27080 tadG; tight adherence protein G D OF122_00140 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D OF122_10135 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D OF122_10775 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D OF122_10770 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D OF122_10130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D OF122_10765 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D OF122_10760 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D OF122_04185 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05235 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_08710 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D OF122_09230 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D OF122_08705 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D OF122_09225 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D OF122_19595 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D OF122_02670 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D OF122_18770 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D OF122_13985 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_18780 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_01310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_02985 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_06210 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_07495 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_04575 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D OF122_02635 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D OF122_18775 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D OF122_18785 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D OF122_02630 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D OF122_18790 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D OF122_02625 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_02680 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_04720 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_18795 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_02675 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D OF122_18765 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D OF122_14835 ATP-binding protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D OF122_09650 PleD family two-component system response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D OF122_15240 PAS domain-containing sensor histidine kinase K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3] D OF122_09645 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D OF122_08435 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D OF122_04725 histidine phosphotransferase family protein K13588 chpT; histidine phosphotransferase ChpT D OF122_04710 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D OF122_03940 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR D OF122_04950 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D OF122_04115 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D OF122_04110 fixJ; response regulator FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ D OF122_04760 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D OF122_18805 response regulator K13815 rpfG; two-component system, response regulator RpfG D OF122_00065 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D OF122_00070 ActR/PrrA/RegA family redox response regulator transcription factor K15012 regA; two-component system, response regulator RegA D OF122_05905 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D OF122_06745 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D OF122_05910 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D OF122_05915 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D OF122_02275 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D OF122_14020 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D OF122_02270 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D OF122_14025 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D OF122_02265 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D OF122_14030 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D OF122_02260 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D OF122_14035 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D OF122_05400 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D OF122_05405 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D OF122_05410 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D OF122_10275 TolC family outer membrane protein K12340 tolC; outer membrane protein D OF122_11695 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D OF122_11690 GumC family protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:pem04148] D OF122_10450 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D OF122_09460 hypothetical protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D OF122_05905 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D OF122_06745 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:pem02024] D OF122_10745 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D OF122_10875 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D OF122_10880 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D OF122_14495 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D OF122_08055 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D OF122_12175 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D OF122_12180 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D OF122_12170 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D OF122_02710 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_03965 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_09180 substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_11510 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_08950 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_01815 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_02700 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_03960 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_09185 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_11525 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_01875 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_08955 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_02705 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_03955 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_08960 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_11530 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_01880 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_01805 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_01885 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_02690 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_03975 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_08940 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_09195 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_11515 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_01800 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_01890 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_02695 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_03970 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_08945 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_09200 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_11520 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_04170 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D OF122_18805 response regulator K13815 rpfG; two-component system, response regulator RpfG D OF122_17925 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D OF122_11810 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D OF122_07565 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D OF122_07570 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D OF122_04190 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D OF122_04195 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D OF122_04200 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D OF122_04205 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D OF122_04210 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D OF122_18875 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D OF122_01540 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_02855 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_05460 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_10250 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_12100 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_17950 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_18460 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_18550 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_01690 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_01535 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_02860 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_05465 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_10255 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_12105 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_17945 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_18555 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_18890 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_01710 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_01530 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_01705 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_02865 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_05470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_10260 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_12110 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_17940 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_18560 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_18885 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_01525 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_01715 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_02870 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_05475 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_10265 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_17935 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_18570 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_18880 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_01520 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D OF122_01720 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D OF122_05480 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D OF122_12115 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D OF122_18575 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D OF122_17445 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D OF122_10385 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D OF122_09255 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D OF122_10860 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D OF122_09425 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D OF122_10380 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D OF122_03325 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D OF122_00770 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D OF122_00560 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D OF122_00790 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:pem02030] D OF122_13985 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_18780 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_01310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_02985 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_06210 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_07495 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_04575 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D OF122_01425 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_01750 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_05785 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_13610 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_13890 sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_13900 sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_01735 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_16895 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_02630 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D OF122_18790 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D OF122_02635 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D OF122_18775 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D OF122_18785 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D OF122_02625 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_02680 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_04720 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_18795 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_02675 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D OF122_18765 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D OF122_02650 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D OF122_02670 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D OF122_18770 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D OF122_04775 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D OF122_08375 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D OF122_04765 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D OF122_09520 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D OF122_10550 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D OF122_04380 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D OF122_10545 OmpA family protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:pem02040] D OF122_08415 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D OF122_04780 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D OF122_04775 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D OF122_04770 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D OF122_04705 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D OF122_04700 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D OF122_08370 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D OF122_08375 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D OF122_04765 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D OF122_09520 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D OF122_08395 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D OF122_08420 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D OF122_08425 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D OF122_04755 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D OF122_08430 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D OF122_08355 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D OF122_08405 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D OF122_08410 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D OF122_04790 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D OF122_08270 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D OF122_08365 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D OF122_08360 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D OF122_08350 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D OF122_08320 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D OF122_08315 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ D OF122_08275 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D OF122_08280 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D OF122_08300 flagellin K02406 fliC; flagellin D OF122_10550 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D OF122_04380 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D OF122_10545 OmpA family protein K02557 motB; chemotaxis protein MotB D OF122_06385 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D OF122_19595 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D OF122_04760 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D OF122_10840 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:pem04980] D OF122_02940 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D OF122_05830 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D OF122_05430 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:pem01501] D OF122_08125 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D OF122_04190 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D OF122_04195 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D OF122_04200 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D OF122_04205 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D OF122_04210 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D OF122_18875 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D OF122_10275 TolC family outer membrane protein K12340 tolC; outer membrane protein D OF122_00040 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D OF122_09995 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D OF122_15205 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D OF122_07645 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:pem01502] D OF122_07685 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D OF122_13440 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D OF122_07655 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D OF122_07660 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D OF122_07670 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pem01503] D OF122_09990 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D OF122_14855 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D OF122_10275 TolC family outer membrane protein K12340 tolC; outer membrane protein D OF122_11020 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:pem01000] C 01001 Protein kinases [BR:pem01001] D OF122_11690 GumC family protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D OF122_16825 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D OF122_10975 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D OF122_19225 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D OF122_14360 cache domain-containing protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D OF122_10775 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D OF122_10765 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D OF122_08710 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D OF122_09230 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D OF122_02630 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D OF122_18790 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D OF122_14835 ATP-binding protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D OF122_15240 PAS domain-containing sensor histidine kinase K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3] D OF122_08435 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D OF122_04115 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D OF122_00065 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D OF122_05455 response regulator K19694 chiS; two-component system, sensor histidine kinase ChiS C 01009 Protein phosphatases and associated proteins [BR:pem01009] D OF122_19250 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D OF122_07935 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:pem01002] D OF122_07165 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D OF122_16045 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D OF122_17630 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D OF122_13710 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D OF122_12195 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase D OF122_13455 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D OF122_03915 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D OF122_10580 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D OF122_17970 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D OF122_01420 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124] D OF122_10405 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D OF122_11830 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D OF122_04255 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D OF122_04265 M3 family oligoendopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D OF122_06915 D-Ala-D-Ala carboxypeptidase family metallohydrolase K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D OF122_15110 insulinase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-] D OF122_13345 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D OF122_17590 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D OF122_17510 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D OF122_12605 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D OF122_08630 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D OF122_10515 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D OF122_07745 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D OF122_09880 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D OF122_08345 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D OF122_04540 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D OF122_03215 M20/M25/M40 family metallo-hydrolase K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-] D OF122_01075 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D OF122_11040 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D OF122_14855 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D OF122_15310 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D OF122_10625 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D OF122_08590 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D OF122_10165 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D OF122_10180 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D OF122_10990 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D OF122_11915 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D OF122_01330 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D OF122_19350 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D OF122_02950 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein D OF122_11285 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease D OF122_00515 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D OF122_14275 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D OF122_18500 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D OF122_14130 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D OF122_14125 U32 family peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D OF122_07915 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D OF122_07910 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:pem01003] D OF122_16085 glycosyltransferase family 2 protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D OF122_08155 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D OF122_07470 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D OF122_02770 transglycosylase domain-containing protein K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D OF122_00040 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D OF122_09995 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D OF122_15205 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D OF122_04090 pelF; GT4 family glycosyltransferase PelF K21011 pelF; polysaccharide biosynthesis protein PelF D OF122_11650 glycosyltransferase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173] D OF122_15545 glycosyltransferase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173] D OF122_05790 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:pem01005] D OF122_11020 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D OF122_11010 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D OF122_07715 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D OF122_11030 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D OF122_11015 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D OF122_01125 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pem01011] D OF122_16360 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D OF122_02280 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D OF122_07680 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D OF122_14015 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D OF122_07675 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D OF122_07650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D OF122_07685 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D OF122_13440 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D OF122_07660 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D OF122_07670 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D OF122_06050 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D OF122_14340 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D OF122_00135 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D OF122_00040 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D OF122_09995 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D OF122_15205 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D OF122_07645 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D OF122_10625 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D OF122_02770 transglycosylase domain-containing protein K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D OF122_11830 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D OF122_04255 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D OF122_06915 D-Ala-D-Ala carboxypeptidase family metallohydrolase K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D OF122_03900 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D OF122_15150 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D OF122_13390 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D OF122_06220 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D OF122_09990 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:pem01004] D OF122_13410 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D OF122_11765 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D OF122_19605 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D OF122_08465 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D OF122_13395 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D OF122_13405 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D OF122_07180 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D OF122_19600 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D OF122_11025 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D OF122_15485 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D OF122_06235 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D OF122_08115 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D OF122_09205 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D OF122_05275 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D OF122_04170 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D OF122_11770 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D OF122_09685 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D OF122_03010 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:pem01008] D OF122_18455 epoxide hydrolase K21159 sgcF; epoxide hydrolase C 01006 Prenyltransferases [BR:pem01006] D OF122_02765 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D OF122_15655 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D OF122_11050 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D OF122_10395 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D OF122_07940 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D OF122_15975 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D OF122_15920 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:pem01007] D OF122_16540 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D OF122_11000 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D OF122_14480 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D OF122_02930 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D OF122_10020 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D OF122_00130 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D OF122_14465 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D OF122_10315 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D OF122_10610 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D OF122_16050 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D OF122_10285 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D OF122_00635 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D OF122_09825 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D OF122_16120 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D OF122_15675 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D OF122_15635 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D OF122_10350 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D OF122_11090 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D OF122_08845 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D OF122_08450 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D OF122_18645 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D OF122_18655 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D OF122_04080 endo alpha-1,4 polygalactosaminidase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D OF122_06260 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_18335 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D OF122_16230 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D OF122_11640 LL-diaminopimelate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D OF122_02520 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D OF122_03085 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D OF122_15575 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D OF122_16410 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D OF122_05590 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D OF122_10455 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D OF122_16740 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D OF122_12205 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D OF122_18745 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D OF122_06060 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D OF122_04625 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:pem00194] D OF122_01305 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D OF122_01300 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D OF122_01295 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D OF122_01290 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D OF122_01285 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D OF122_15815 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D OF122_15820 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D OF122_15810 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D OF122_15805 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D OF122_15800 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:pem03000] D OF122_12840 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D OF122_13130 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D OF122_09115 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D OF122_13525 helix-turn-helix domain-containing protein K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein D OF122_05370 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator D OF122_07765 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D OF122_00455 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D OF122_02595 trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D OF122_13485 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D OF122_16595 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D OF122_09120 pcaQ; pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D OF122_17010 pcaQ; pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D OF122_06855 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D OF122_07595 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D OF122_18465 LysR family transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway D OF122_00155 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D OF122_01635 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D OF122_13920 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D OF122_18280 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D OF122_01480 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D OF122_16180 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D OF122_17330 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D OF122_05770 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D OF122_17845 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D OF122_04030 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D OF122_17975 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D OF122_02880 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D OF122_12120 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D OF122_05425 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D OF122_05175 GntR family transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator D OF122_05585 TetR family transcriptional regulator C-terminal domain-containing protein K09017 rutR; TetR/AcrR family transcriptional regulator D OF122_15560 TetR/AcrR family transcriptional regulator K19060 mphR; TetR/AcrR family transcriptional regulator, macrolide resistance operon repressor D OF122_17240 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D OF122_07490 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D OF122_17090 Lrp/AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes D OF122_12030 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D OF122_14520 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D OF122_00180 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D OF122_12430 helix-turn-helix domain-containing protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D OF122_06545 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D OF122_14720 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D OF122_00105 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D OF122_17925 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D OF122_19485 transcriptional repressor K09826 irr; Fur family transcriptional regulator, iron response regulator D OF122_14280 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D OF122_14140 Crp/Fnr family transcriptional regulator K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator D OF122_02400 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D OF122_05580 rirA; iron-responsive transcriptional regulator RirA K13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator D OF122_05160 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D OF122_15580 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D OF122_11105 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D OF122_13870 helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D OF122_07020 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D OF122_03830 winged helix-turn-helix domain-containing protein K02019 modE; molybdate transport system regulatory protein D OF122_16535 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D OF122_07520 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D OF122_18020 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D OF122_15585 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D OF122_03240 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D OF122_00620 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D OF122_04565 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D OF122_03125 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D OF122_00410 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D OF122_02175 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D OF122_11325 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D OF122_15870 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D OF122_08330 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D OF122_11815 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D OF122_10290 sel1 repeat family protein K25885 exoR; exopolysaccharide production negative regulator C 03021 Transcription machinery [BR:pem03021] D OF122_09445 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D OF122_09285 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D OF122_09290 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D OF122_11935 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D OF122_06385 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D OF122_11445 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D OF122_04145 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D OF122_04810 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D OF122_05975 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D OF122_07430 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D OF122_14780 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D OF122_17480 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D OF122_04675 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D OF122_19595 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D OF122_19015 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D OF122_11795 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D OF122_09260 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D OF122_13695 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D OF122_08330 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D OF122_06275 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D OF122_00595 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:pem03019] D OF122_09985 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D OF122_11910 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D OF122_11100 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D OF122_09670 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D OF122_11495 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D OF122_03415 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D OF122_17235 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D OF122_10840 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D OF122_19520 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D OF122_00595 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D OF122_00420 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D OF122_16095 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D OF122_10745 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D OF122_09810 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D OF122_16830 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D OF122_05885 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D OF122_01320 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D OF122_10950 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D OF122_16965 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:pem03011] D OF122_19395 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D OF122_11070 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D OF122_09355 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D OF122_08500 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D OF122_09410 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D OF122_13420 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D OF122_09305 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D OF122_09395 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D OF122_11665 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D OF122_09320 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D OF122_09440 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D OF122_09300 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D OF122_09435 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D OF122_09390 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D OF122_19525 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D OF122_00795 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D OF122_09370 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D OF122_13425 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D OF122_09345 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D OF122_19650 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D OF122_04305 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D OF122_09270 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D OF122_09340 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D OF122_09325 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D OF122_09330 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D OF122_09385 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D OF122_09400 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D OF122_13430 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D OF122_09275 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D OF122_09265 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D OF122_09280 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D OF122_11670 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D OF122_09375 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D OF122_09420 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D OF122_09360 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D OF122_09450 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D OF122_09405 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D OF122_00810 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D OF122_18640 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D OF122_01385 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D OF122_09350 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D OF122_09335 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D OF122_09380 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D OF122_01380 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D OF122_03205 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D OF122_09365 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D OF122_09415 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D OF122_04370 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D OF122_02775 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D OF122_09660 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D OF122_17435 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D OF122_18635 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D OF122_04225 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D OF122_05990 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D OF122_03450 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D OF122_03430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D OF122_03445 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:pem03009] D OF122_11910 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D OF122_11905 era; GTPase Era K03595 era; GTPase D OF122_01365 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D OF122_08330 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D OF122_19015 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D OF122_11795 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D OF122_09260 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D OF122_13375 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D OF122_01080 methyltransferase domain-containing protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D OF122_13755 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D OF122_16030 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D OF122_15970 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D OF122_00610 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D OF122_07635 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D OF122_00385 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D OF122_16240 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D OF122_15450 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D OF122_08925 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D OF122_13810 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D OF122_01340 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D OF122_00885 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D OF122_00870 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D OF122_15550 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D OF122_19135 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D OF122_18725 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D OF122_16035 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D OF122_09475 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D OF122_04680 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D OF122_00110 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D OF122_09770 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D OF122_15880 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D OF122_00800 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D OF122_09505 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D OF122_07755 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D OF122_09985 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D OF122_09720 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D OF122_03415 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D OF122_13465 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D OF122_10740 hflX; GTPase HflX K03665 hflX; GTPase D OF122_15430 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D OF122_11930 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D OF122_19540 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D OF122_19020 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D OF122_01345 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D OF122_00085 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D OF122_19480 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D OF122_05980 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:pem03016] D OF122_11000 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D OF122_14480 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D OF122_11090 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D OF122_16050 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D OF122_00635 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D OF122_10610 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D OF122_10315 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D OF122_09825 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D OF122_08450 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D OF122_08845 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D OF122_10350 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D OF122_14465 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D OF122_10285 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D OF122_16120 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D OF122_18645 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D OF122_18655 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D OF122_10020 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D OF122_00130 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D OF122_09615 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D OF122_19025 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D OF122_17530 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D OF122_19535 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D OF122_10030 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D OF122_15430 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D OF122_07940 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D OF122_00600 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D OF122_00605 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D OF122_02510 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D OF122_17440 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D OF122_07630 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D OF122_00405 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D OF122_09820 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D OF122_19575 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D OF122_00850 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D OF122_16540 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D OF122_15675 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D OF122_15635 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D OF122_04080 endo alpha-1,4 polygalactosaminidase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D OF122_02930 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D OF122_16015 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D OF122_14560 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D OF122_10780 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D OF122_00095 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D OF122_00780 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D OF122_19180 methyltransferase domain-containing protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D OF122_08490 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D OF122_10400 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D OF122_00805 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D OF122_05900 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D OF122_18725 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D OF122_04800 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D OF122_08510 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D OF122_02805 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D OF122_10065 sufA; Fe-S cluster assembly scaffold SufA K13628 iscA; iron-sulfur cluster assembly protein D OF122_15595 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ D OF122_10500 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D OF122_19550 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D OF122_10505 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D OF122_00115 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D OF122_01045 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D OF122_19260 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D OF122_09670 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D OF122_19520 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:pem03012] D OF122_19005 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D OF122_18695 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D OF122_13315 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D OF122_11065 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D OF122_09245 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D OF122_09315 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D OF122_09310 fusA; elongation factor G K02355 fusA; elongation factor G D OF122_03375 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D OF122_11055 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D OF122_03385 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D OF122_05985 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D OF122_16335 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D OF122_04395 efp; elongation factor P K02356 efp; elongation factor P D OF122_10000 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D OF122_00210 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D OF122_10215 arfB; alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:pem03110] D OF122_03395 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D OF122_10170 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D OF122_00525 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D OF122_00420 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D OF122_19185 Hsp70 family protein K04046 yegD; hypothetical chaperone protein D OF122_16095 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D OF122_00425 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D OF122_07625 DnaJ family molecular chaperone K05801 djlA; DnaJ like chaperone protein D OF122_16730 Hsp33 family molecular chaperone K04083 hslO; molecular chaperone Hsp33 D OF122_00415 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D OF122_03920 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA D OF122_03170 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D OF122_16090 co-chaperone GroES K04078 groES; chaperonin GroES D OF122_14855 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D OF122_04540 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D OF122_15805 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D OF122_00560 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D OF122_07150 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D OF122_15030 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D OF122_05450 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D OF122_10870 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D OF122_03320 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D OF122_13365 SurA N-terminal domain-containing protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D OF122_19280 trxA; thioredoxin K03671 TXN; thioredoxin D OF122_00695 co-chaperone YbbN K05838 ybbN; putative thioredoxin D OF122_03345 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D OF122_08530 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D OF122_00760 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:pem04131] D OF122_13310 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D OF122_04410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D OF122_04420 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D OF122_00445 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D OF122_04230 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:pem03032] D OF122_15625 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D OF122_12840 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D OF122_13130 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D OF122_10185 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D OF122_11760 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D OF122_19345 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D OF122_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D OF122_13435 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D OF122_06380 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D OF122_10430 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D OF122_11075 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D OF122_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D OF122_13330 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D OF122_00625 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D OF122_10615 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D OF122_00565 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D OF122_17565 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D OF122_15765 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D OF122_18625 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D OF122_07730 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D OF122_10475 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D OF122_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D OF122_11890 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D OF122_10080 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D OF122_09675 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:pem03036] D OF122_12840 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D OF122_13130 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D OF122_11910 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D OF122_04410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D OF122_10185 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D OF122_11760 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D OF122_19345 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D OF122_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D OF122_10745 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D OF122_17240 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D OF122_07490 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D OF122_15790 AAA family ATPase K03529 smc; chromosome segregation protein D OF122_10325 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D OF122_10330 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D OF122_07695 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D OF122_03000 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D OF122_07645 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D OF122_00665 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D OF122_07640 hypothetical protein K03586 ftsL; cell division protein FtsL D OF122_07690 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D OF122_07665 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D OF122_03005 ABC transporter permease K09811 ftsX; cell division transport system permease protein D OF122_07710 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D OF122_04435 cell division protein ZapA K09888 zapA; cell division protein ZapA D OF122_01220 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D OF122_09990 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D OF122_00615 ParA family protein K03496 parA; chromosome partitioning protein D OF122_09585 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein D OF122_19370 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein D OF122_00620 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D OF122_04565 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D OF122_11890 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D OF122_10080 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D OF122_00605 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D OF122_00610 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D OF122_10400 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D OF122_01270 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D OF122_03265 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D OF122_16220 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D OF122_17450 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:pem03400] D OF122_11375 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D OF122_09560 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D OF122_15775 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D OF122_00465 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D OF122_03285 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D OF122_19620 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D OF122_00455 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D OF122_02595 trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D OF122_04825 UdgX family uracil-DNA binding protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D OF122_11945 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D OF122_15710 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D OF122_02925 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D OF122_16130 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D OF122_19645 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D OF122_00655 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D OF122_10295 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D OF122_11620 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D OF122_07730 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D OF122_18625 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D OF122_10425 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D OF122_06140 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D OF122_06080 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D OF122_07250 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D OF122_07805 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D OF122_06475 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D OF122_09285 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D OF122_09290 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D OF122_09445 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D OF122_11935 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D OF122_10720 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D OF122_00145 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D OF122_16020 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D OF122_16000 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D OF122_15440 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D OF122_11075 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D OF122_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D OF122_13330 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D OF122_00625 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D OF122_10615 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D OF122_00565 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D OF122_17565 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D OF122_10430 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D OF122_12835 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D OF122_08445 recA; recombinase RecA K03553 recA; recombination protein RecA D OF122_04485 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D OF122_04490 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D OF122_04480 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D OF122_01275 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D OF122_13445 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D OF122_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D OF122_10730 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D OF122_11900 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D OF122_17555 recR; recombination mediator RecR K06187 recR; recombination protein RecR D OF122_07725 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D OF122_19275 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D OF122_12770 DEAD/DEAH box helicase K19789 radD; DNA repair protein RadD D OF122_15330 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D OF122_09045 Ku protein K10979 ku; DNA end-binding protein Ku D OF122_09050 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D OF122_10475 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D OF122_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D OF122_09675 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D OF122_10185 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D OF122_11760 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D OF122_19345 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D OF122_17235 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D OF122_07260 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D OF122_09635 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D OF122_10990 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D OF122_01570 DNA repair protein K14160 imuA; protein ImuA D OF122_01575 DNA polymerase Y family protein K14161 imuB; protein ImuB D OF122_01580 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D OF122_16490 ligase-associated DNA damage response DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D OF122_09940 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:pem03029] D OF122_05910 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D OF122_19005 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D OF122_18695 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D OF122_11065 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D OF122_09245 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D OF122_09315 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D OF122_09310 fusA; elongation factor G K02355 fusA; elongation factor G D OF122_11780 ubiquinol-cytochrome C chaperone K17662 CBP3; cytochrome b pre-mRNA-processing protein 3 D OF122_03175 helicase-related protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D OF122_11905 era; GTPase Era K03595 era; GTPase D OF122_10020 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D OF122_00635 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D OF122_09825 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D OF122_10315 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D OF122_01835 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D OF122_09740 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D OF122_18595 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D OF122_09775 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D OF122_09730 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D OF122_10430 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D OF122_11035 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D OF122_00420 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D OF122_00415 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D OF122_16095 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D OF122_16090 co-chaperone GroES K04078 groES; chaperonin GroES D OF122_00425 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D OF122_10030 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D OF122_08530 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D OF122_16220 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D OF122_15920 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D OF122_15910 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D OF122_11675 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D OF122_17445 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D OF122_07155 SCO family protein K07152 SCO1; protein SCO1 D OF122_15025 SCO family protein K07152 SCO1; protein SCO1 D OF122_15445 SCO family protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:pem02000] D OF122_06175 ABC transporter ATP-binding protein/permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D OF122_06170 ABC transporter ATP-binding protein/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D OF122_14430 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D OF122_14825 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D OF122_14830 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D OF122_04375 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D OF122_15135 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D OF122_16780 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D OF122_05955 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D OF122_04060 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D OF122_14220 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D OF122_05390 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D OF122_05395 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D OF122_07395 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D OF122_03825 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D OF122_03820 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D OF122_05195 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D OF122_05200 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D OF122_05205 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D OF122_04865 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D OF122_01930 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D OF122_03675 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D OF122_05065 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D OF122_16160 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D OF122_01920 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D OF122_05070 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D OF122_16165 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D OF122_01925 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D OF122_05055 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D OF122_16155 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D OF122_04660 thiB; thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D OF122_04655 hypothetical protein K02063 thiP; thiamine transport system permease protein D OF122_04650 ATP-binding cassette domain-containing protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D OF122_12550 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D OF122_12540 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D OF122_12545 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D OF122_12535 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D OF122_03505 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D OF122_03490 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein D OF122_03495 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein D OF122_03500 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D OF122_12175 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D OF122_12180 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D OF122_12170 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D OF122_02715 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D OF122_16700 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D OF122_16695 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D OF122_16690 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D OF122_05500 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D OF122_05505 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D OF122_05515 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D OF122_05510 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D OF122_05000 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D OF122_05625 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D OF122_07365 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D OF122_07500 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D OF122_06195 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D OF122_04995 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D OF122_05615 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D OF122_05620 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D OF122_07370 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D OF122_07510 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D OF122_06190 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D OF122_05005 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D OF122_05610 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D OF122_06185 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D OF122_07360 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D OF122_07505 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D OF122_18005 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_18045 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_01500 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_11475 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_12500 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_14655 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_17290 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_17360 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_17985 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D OF122_17990 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D OF122_17995 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D OF122_16195 ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein D OF122_16190 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein D OF122_16185 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein D OF122_11490 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D OF122_11485 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D OF122_11480 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D OF122_13520 ABC transporter substrate-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein D OF122_13515 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein D OF122_13510 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein D OF122_13505 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10191 lacK; lactose/L-arabinose transport system ATP-binding protein D OF122_17345 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein D OF122_17335 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D OF122_17340 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D OF122_08895 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D OF122_08900 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D OF122_08905 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D OF122_13605 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D OF122_17190 chvE; sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D OF122_17180 gguB; sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D OF122_17185 gguA; sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_13565 sugar ABC transporter substrate-binding protein K10552 frcB; fructose transport system substrate-binding protein D OF122_13560 ABC transporter permease K10553 frcC; fructose transport system permease protein D OF122_13555 ATP-binding cassette domain-containing protein K10554 frcA; fructose transport system ATP-binding protein D OF122_16620 rhaS; rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D OF122_16630 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein D OF122_16635 ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein D OF122_16625 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D OF122_01425 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_01750 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_05785 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_13610 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_13890 sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_13900 sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_01735 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_16895 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D OF122_01430 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_01765 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_05780 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_13615 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_13880 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_13910 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_16900 ABC transporter permease K10440 rbsC; ribose transport system permease protein D OF122_01435 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D OF122_05775 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D OF122_13885 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D OF122_01760 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D OF122_15040 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D OF122_15050 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D OF122_15055 yjfF; sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein D OF122_15045 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D OF122_18405 extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D OF122_19140 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D OF122_18400 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D OF122_19145 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D OF122_18395 ABC transporter permease subunit K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D OF122_19150 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D OF122_18375 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D OF122_19155 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D OF122_18060 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D OF122_18055 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D OF122_18050 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein D OF122_05745 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D OF122_17720 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D OF122_05755 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D OF122_17710 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D OF122_05750 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D OF122_17705 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D OF122_05760 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D OF122_17715 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D OF122_12145 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D OF122_12155 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D OF122_12150 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D OF122_12140 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component D OF122_01485 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D OF122_17270 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D OF122_01490 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D OF122_17275 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D OF122_01495 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D OF122_12505 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D OF122_14665 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D OF122_17280 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D OF122_13905 ATP-binding cassette domain-containing protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_16905 ATP-binding cassette domain-containing protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D OF122_16820 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D OF122_16815 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D OF122_16810 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D OF122_16805 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D OF122_01915 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D OF122_11390 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D OF122_11410 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D OF122_11405 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein D OF122_11400 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D OF122_11395 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D OF122_09020 transporter substrate-binding domain-containing protein K23061 lhpP; hydroxyproline transporter system substrate-binding protein D OF122_09015 amino acid ABC transporter permease K23062 lhpM; hydroxyproline transport system permease protein D OF122_09010 amino acid ABC transporter permease K23063 lhpN; hydroxyproline transport system permease protein D OF122_09005 amino acid ABC transporter ATP-binding protein K23064 lhpO; hydroxyproline transport system ATP-binding protein [EC:7.4.2.1] D OF122_02710 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_03965 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_09180 substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_11510 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_08950 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D OF122_01815 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_02700 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_03960 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_09185 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_11525 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_01875 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_08955 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D OF122_02705 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_03955 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_08960 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_11530 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_01880 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D OF122_01805 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_01885 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_02690 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_03975 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_08940 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_09195 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_11515 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D OF122_01800 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_01890 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_02695 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_03970 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_08945 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_09200 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_11520 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D OF122_19040 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D OF122_19045 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D OF122_19050 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D OF122_19055 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D OF122_19060 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D OF122_05555 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D OF122_08795 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D OF122_16550 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D OF122_17110 ehuB; ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D OF122_03725 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D OF122_05015 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D OF122_07350 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D OF122_03720 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D OF122_05545 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D OF122_05550 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D OF122_08785 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D OF122_08790 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D OF122_17100 ehuD; ectoine/hydroxyectoine ABC transporter permease subunit EhuD K02029 ABC.PA.P; polar amino acid transport system permease protein D OF122_17105 ehuC; ectoine/hydroxyectoine ABC transporter permease subunit EhuC K02029 ABC.PA.P; polar amino acid transport system permease protein D OF122_03715 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D OF122_05560 ATP-binding cassette domain-containing protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D OF122_08780 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D OF122_17095 ehuA; ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D OF122_04190 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D OF122_04195 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D OF122_04200 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D OF122_04205 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D OF122_04210 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D OF122_18875 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D OF122_01540 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_02855 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_05460 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_10250 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_12100 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_17950 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_18460 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_18550 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_01690 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D OF122_01535 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_02860 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_05465 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_10255 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_12105 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_17945 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_18555 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_18890 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_01710 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D OF122_01530 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_01705 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_02865 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_05470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_10260 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_12110 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_17940 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_18560 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_18885 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D OF122_01525 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_01715 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_02870 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_05475 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_10265 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_17935 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_18570 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_18880 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D OF122_01520 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D OF122_01720 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D OF122_05480 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D OF122_12115 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D OF122_18575 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D OF122_14385 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D OF122_14370 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D OF122_14375 ABC transporter permease K13895 yejE; microcin C transport system permease protein D OF122_14380 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D OF122_11590 ABC transporter substrate-binding protein K25287 desE; iron-desferrioxamine transport system substrate-binding protein D OF122_06215 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D OF122_11595 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D OF122_11610 iron chelate uptake ABC transporter family permease subunit K23186 fepD; iron-siderophore transport system permease protein D OF122_11605 fepG; iron-enterobactin ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D OF122_11600 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D OF122_11750 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D OF122_11740 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein D OF122_11745 ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein D OF122_11735 ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D OF122_05125 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D OF122_05130 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D OF122_05135 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D OF122_17150 putative F420-0 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D OF122_12080 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D OF122_17145 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein D OF122_12075 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D OF122_17140 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D OF122_17910 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein D OF122_17920 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D OF122_17915 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D OF122_05300 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D OF122_05290 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D OF122_05285 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein D OF122_05295 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D OF122_03060 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D OF122_15405 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D OF122_09855 Ykof family thiamine-binding protein K24620 ykoF; energy-coupling factor transport system substrate-specific component D OF122_09870 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D OF122_09865 ATP-binding cassette domain-containing protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D OF122_09860 ECF transporter S component K16925 ykoE; energy-coupling factor transport system permease protein D OF122_13350 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein D OF122_13355 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein D OF122_19590 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D OF122_03540 ABC transporter ATP-binding protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-] D OF122_11085 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D OF122_11080 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D OF122_00755 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D OF122_00750 heme ABC transporter permease K02195 ccmC; heme exporter protein C D OF122_00745 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D OF122_00740 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D OF122_03005 ABC transporter permease K09811 ftsX; cell division transport system permease protein D OF122_03000 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D OF122_07895 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D OF122_11655 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D OF122_15960 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D OF122_05010 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D OF122_07355 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D OF122_16870 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D OF122_04990 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D OF122_07375 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D OF122_07890 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D OF122_11660 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D OF122_15955 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D OF122_16865 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D OF122_14975 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D OF122_14970 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D OF122_10045 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D OF122_07970 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D OF122_16505 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D OF122_08145 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D OF122_08730 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D OF122_08520 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D OF122_10675 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D OF122_14270 DHA2 family efflux MFS transporter permease subunit K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D OF122_03815 MFS transporter K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein D OF122_11350 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D OF122_03370 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D OF122_19240 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D OF122_19235 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D OF122_19475 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D OF122_14955 ion transporter K08714 VGSC; voltage-gated sodium channel D OF122_00670 ammonium transporter K03320 amt; ammonium transporter, Amt family D OF122_02200 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D OF122_07555 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D OF122_07815 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D OF122_10415 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D OF122_14530 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D OF122_19555 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D OF122_02330 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D OF122_04815 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D OF122_12060 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D OF122_16440 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D OF122_19195 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D OF122_09570 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D OF122_10550 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D OF122_04380 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D OF122_10545 OmpA family protein K02557 motB; chemotaxis protein MotB D OF122_04505 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D OF122_04510 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D OF122_16765 CrcB family protein K06199 crcB; fluoride exporter D OF122_16770 CrcB family protein K06199 crcB; fluoride exporter D OF122_03245 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D OF122_04670 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D OF122_11180 hypothetical protein K16079 omp31; outer membrane immunogenic protein D OF122_11185 outer membrane beta-barrel protein K16079 omp31; outer membrane immunogenic protein D OF122_11190 porin family protein K16079 omp31; outer membrane immunogenic protein D OF122_10275 TolC family outer membrane protein K12340 tolC; outer membrane protein D OF122_11695 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D OF122_11035 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D OF122_07720 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D OF122_18715 autotransporter assembly complex protein TamA K07278 tamA; translocation and assembly module TamA D OF122_18710 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB D OF122_19585 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D OF122_19580 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D OF122_13360 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein D OF122_00080 hemolysin family protein K06189 corC; hemolysin (HlyC) family protein D OF122_18545 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D OF122_14425 efflux RND transporter permease subunit K18989 vexF; multidrug efflux pump D OF122_05845 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump D OF122_01145 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter D OF122_07565 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D OF122_07570 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D OF122_12660 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D OF122_17780 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein D OF122_08760 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein D OF122_07945 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D OF122_16655 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter D OF122_03735 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D OF122_16855 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D OF122_15175 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D OF122_16715 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D OF122_10750 hypothetical protein K03498 trkH; trk/ktr system potassium uptake protein D OF122_10755 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D OF122_04595 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D OF122_07830 chloride channel protein K03281 clcA; chloride channel protein, CIC family D OF122_05165 chrA; chromate efflux transporter K07240 chrA; chromate transporter D OF122_05050 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D OF122_05495 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D OF122_12385 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D OF122_18415 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family D OF122_04950 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D OF122_04020 TRAP transporter large permease subunit K21393 yiaN; TRAP-type transport system large permease protein D OF122_04025 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein D OF122_04015 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D OF122_14800 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D OF122_05150 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter D OF122_15300 putative monovalent cation/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D OF122_15295 Na(+)/H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D OF122_06935 NADH-quinone oxidoreductase subunit K K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D OF122_15290 Na+/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D OF122_15285 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D OF122_15280 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D OF122_15275 cation:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D OF122_06945 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D OF122_15270 mnhG; monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D OF122_00135 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D OF122_14760 AEC family transporter K13936 mdcF; malonate transporter and related proteins D OF122_16285 AEC family transporter K13936 mdcF; malonate transporter and related proteins D OF122_19095 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D OF122_19100 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D OF122_03700 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D OF122_07205 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D OF122_03690 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D OF122_10970 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D OF122_03210 VUT family protein K09125 yhhQ; queuosine precursor transporter D OF122_18985 rubrerythrin family protein K22737 mbfA; erythrin-vacuolar iron transport family protein D OF122_00370 MarC family protein K05595 marC; multiple antibiotic resistance protein D OF122_07665 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D OF122_03865 DUF1007 family protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein D OF122_04525 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D OF122_04520 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D OF122_00970 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D OF122_07160 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D OF122_08615 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D OF122_04065 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D OF122_14215 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D OF122_14420 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system D OF122_11690 GumC family protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D OF122_08505 peptide transporter K17938 sbmA; peptide/bleomycin uptake transporter D OF122_13745 tryptophan-rich sensory protein K05770 TSPO; translocator protein D OF122_14870 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D OF122_16300 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D OF122_05700 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] C 02044 Secretion system [BR:pem02044] D OF122_10275 TolC family outer membrane protein K12340 tolC; outer membrane protein D OF122_04060 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D OF122_14220 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D OF122_04065 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D OF122_14215 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D OF122_17630 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D OF122_17625 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D OF122_17620 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D OF122_17615 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D OF122_17610 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D OF122_17605 type II secretion system F family protein K12510 tadB; tight adherence protein B D OF122_17600 type II secretion system F family protein K12511 tadC; tight adherence protein C D OF122_19425 pilus assembly protein TadG-related protein K27080 tadG; tight adherence protein G D OF122_17635 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D OF122_17640 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D OF122_00980 YggT family protein K02221 yggT; YggT family protein D OF122_10995 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC D OF122_04755 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D OF122_08430 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D OF122_04780 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D OF122_04770 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D OF122_04705 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D OF122_04765 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D OF122_09520 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D OF122_08395 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D OF122_08420 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D OF122_08425 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D OF122_03325 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D OF122_00560 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D OF122_10385 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D OF122_09255 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D OF122_10860 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D OF122_09425 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D OF122_00790 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D OF122_00770 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D OF122_10380 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D OF122_17445 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D OF122_10335 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D OF122_10345 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:pem02042] D OF122_03245 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D OF122_04670 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D OF122_15140 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:pem02022] D OF122_16825 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D OF122_16795 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D OF122_10975 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D OF122_01910 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD D OF122_03685 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD D OF122_10980 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD D OF122_19225 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D OF122_19220 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D OF122_07545 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D OF122_14850 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D OF122_14910 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D OF122_14365 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D OF122_14360 cache domain-containing protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D OF122_10775 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D OF122_10770 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D OF122_10765 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D OF122_10760 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D OF122_08710 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D OF122_09230 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D OF122_08705 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D OF122_09225 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D OF122_02630 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D OF122_18790 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D OF122_02625 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_02680 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_04720 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_18795 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_02675 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D OF122_18765 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D OF122_14835 ATP-binding protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D OF122_15240 PAS domain-containing sensor histidine kinase K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3] D OF122_09650 PleD family two-component system response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D OF122_09645 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D OF122_08435 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D OF122_04710 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D OF122_03940 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR D OF122_04115 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D OF122_04110 fixJ; response regulator FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ D OF122_04760 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D OF122_18805 response regulator K13815 rpfG; two-component system, response regulator RpfG D OF122_00065 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D OF122_00070 ActR/PrrA/RegA family redox response regulator transcription factor K15012 regA; two-component system, response regulator RegA D OF122_05190 ABC transporter substrate-binding protein K22067 nasS; two-component system, oxyanion-binding sensor D OF122_05185 ANTAR domain-containing response regulator K07183 nasT; two-component system, response regulator / RNA-binding antiterminator D OF122_05455 response regulator K19694 chiS; two-component system, sensor histidine kinase ChiS C 02035 Bacterial motility proteins [BR:pem02035] D OF122_02630 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D OF122_18790 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D OF122_02635 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D OF122_18775 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D OF122_18785 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D OF122_02650 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D OF122_02670 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D OF122_18770 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D OF122_02675 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D OF122_18765 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D OF122_02625 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_02680 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_04720 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_18795 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D OF122_13985 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_18780 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_01310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_02985 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_06210 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_07495 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D OF122_04575 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D OF122_04770 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D OF122_04705 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D OF122_04700 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D OF122_08395 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D OF122_08420 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D OF122_08425 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D OF122_04755 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D OF122_08430 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D OF122_04775 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D OF122_08375 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D OF122_04765 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D OF122_09520 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D OF122_04780 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D OF122_08320 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D OF122_08355 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D OF122_08350 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D OF122_08370 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D OF122_08415 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D OF122_08405 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D OF122_08410 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D OF122_04790 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D OF122_08365 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D OF122_08360 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D OF122_08315 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ D OF122_08270 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D OF122_08275 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D OF122_08280 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D OF122_08300 flagellin K02406 fliC; flagellin D OF122_10550 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D OF122_04380 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D OF122_10545 OmpA family protein K02557 motB; chemotaxis protein MotB D OF122_04760 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D OF122_08285 flaF; flagellar biosynthesis regulator FlaF K06602 flaF; flagellar biosynthesis activator protein FlaF D OF122_08290 flbT; flagellar biosynthesis repressor FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT D OF122_17635 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D OF122_17640 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D OF122_17630 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D OF122_17625 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D OF122_17620 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D OF122_17615 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D OF122_17610 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:pem04812] D OF122_07710 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D OF122_07695 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D OF122_00615 ParA family protein K03496 parA; chromosome partitioning protein D OF122_09585 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein D OF122_19370 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein D OF122_00620 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D OF122_04565 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:pem04147] D OF122_04410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D OF122_10840 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D OF122_04420 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D OF122_04415 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D OF122_04230 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D OF122_16095 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D OF122_00420 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D OF122_10510 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D OF122_13770 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D OF122_09245 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D OF122_09315 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D OF122_09615 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D OF122_04170 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D OF122_04185 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05235 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_05270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D OF122_19250 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D OF122_09430 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D OF122_05925 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D OF122_02975 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D OF122_17285 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D OF122_00895 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D OF122_05605 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D OF122_09235 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D OF122_07460 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D OF122_16290 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D OF122_10130 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D OF122_11845 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D OF122_01000 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D OF122_14960 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D OF122_04630 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D OF122_01090 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D OF122_01255 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_10810 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D OF122_12040 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit D OF122_17800 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D OF122_10865 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D OF122_00445 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:pem02048] D OF122_03575 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D OF122_12470 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D OF122_03560 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D OF122_12490 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D OF122_15770 DNA methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72] D OF122_12840 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D OF122_13130 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D OF122_13850 restriction endonuclease K07448 mrr; restriction system protein D OF122_13870 helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D OF122_07710 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D OF122_11890 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D OF122_10080 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D OF122_11000 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D OF122_14480 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D OF122_10725 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D OF122_10030 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:pem01504] D OF122_15155 aac(3); aminoglycoside 3-N-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81] D OF122_16315 hypothetical protein K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D OF122_08730 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D OF122_03815 MFS transporter K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein D OF122_06545 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D OF122_14720 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D OF122_10275 TolC family outer membrane protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pem00537] D OF122_14960 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins [BR:pem03200] D OF122_18145 hypothetical protein K21313 1; Autographiviridae RNA polymerase [EC:2.7.7.6] C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:pem03100] D OF122_03440 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D OF122_11985 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D OF122_19415 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D OF122_18940 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D OF122_03035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D OF122_11230 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D OF122_11500 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D OF122_17420 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D OF122_11225 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D OF122_10230 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D OF122_11215 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D OF122_13825 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D OF122_15380 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D OF122_11565 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D OF122_11570 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D OF122_00700 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D OF122_08935 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D OF122_16685 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D OF122_16145 tRNA-His K14226 tRNA-His; tRNA His D OF122_03435 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D OF122_08660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D OF122_09525 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D OF122_10140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D OF122_19570 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D OF122_02885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D OF122_10565 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D OF122_08090 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D OF122_06440 tRNA-Ile K14230 tRNA-Met; tRNA Met D OF122_04830 tRNA-Met K14230 tRNA-Met; tRNA Met D OF122_03555 tRNA-Met K14230 tRNA-Met; tRNA Met D OF122_16320 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D OF122_11425 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D OF122_11720 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D OF122_15385 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D OF122_18095 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D OF122_01400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D OF122_10690 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D OF122_12860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D OF122_16365 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D OF122_01020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D OF122_08880 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D OF122_09250 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D OF122_08930 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D OF122_03945 tRNA-Val K14237 tRNA-Val; tRNA Val D OF122_03950 tRNA-Val K14237 tRNA-Val; tRNA Val D OF122_10190 tRNA-Val K14237 tRNA-Val; tRNA Val D OF122_03430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D OF122_03445 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D OF122_03450 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D OF122_17570 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D OF122_07630 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D OF122_07850 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D OF122_03995 SDR family oxidoreductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D OF122_06310 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D OF122_14660 aldo/keto reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D OF122_02845 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D OF122_04035 SDR family oxidoreductase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410] D OF122_01755 Gfo/Idh/MocA family oxidoreductase K24995 E1.1.1.425; levoglucosan dehydrogenase [EC:1.1.1.425] D OF122_14805 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D OF122_17160 TIGR03557 family F420-dependent LLM class oxidoreductase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2] D OF122_15705 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D OF122_10700 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D OF122_11850 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D OF122_08085 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D OF122_18085 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D OF122_15305 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D OF122_17465 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D OF122_13235 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D OF122_05870 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D OF122_10010 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D OF122_18075 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D OF122_00175 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D OF122_12435 merA; mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D OF122_05145 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D OF122_05155 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D OF122_10270 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D OF122_10360 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D OF122_06625 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D OF122_11615 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D OF122_14765 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D OF122_04610 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D OF122_19035 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D OF122_00100 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D OF122_02640 GNAT family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D OF122_09735 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D OF122_18680 GNAT family N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D OF122_09955 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D OF122_08080 leucyl/phenylalanyl-tRNA--protein transferase family protein K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D OF122_11880 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D OF122_00150 GNAT family N-acetyltransferase K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30] D OF122_06015 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D OF122_02875 four-carbon acid sugar kinase family protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D OF122_14840 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D OF122_00830 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D OF122_04495 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D OF122_10605 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D OF122_03110 thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D OF122_01505 trehalase family glycosidase K25649 mgh; mannosylglycerate hydrolase [EC:3.2.1.170] D OF122_02810 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D OF122_09600 SPOR domain-containing protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D OF122_17540 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D OF122_18255 proline iminopeptidase-family hydrolase K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101] D OF122_03350 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D OF122_18250 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D OF122_03770 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D OF122_18345 SIS domain-containing protein K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-] D OF122_08595 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D OF122_13580 altronate dehydratase family protein K26399 K26399; arabinonate dehydratase [EC:4.2.1.5] D OF122_10150 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D OF122_13640 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D OF122_16600 rhaM; L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D OF122_10490 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D OF122_16570 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D OF122_05230 feruloyl-CoA synthase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34] D OF122_07060 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D OF122_12340 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D OF122_07065 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D OF122_12345 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D OF122_07070 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D OF122_12350 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D OF122_02245 cation-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D OF122_06565 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D OF122_06650 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D OF122_14050 cation-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D OF122_14190 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D OF122_07140 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D OF122_12670 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D OF122_08635 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D OF122_03165 ferredoxin family protein K05524 fdxA; ferredoxin D OF122_10910 tcuB; tricarballylate utilization 4Fe-4S protein TcuB K13795 citB; citrate/tricarballylate utilization protein D OF122_10915 tcuA; FAD-dependent tricarballylate dehydrogenase TcuA K13796 cobZ; tricarballylate dehydrogenase D OF122_12035 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D OF122_06330 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D OF122_00640 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism D OF122_17875 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW D OF122_01025 heme biosynthesis protein HemY K02498 hemY; HemY protein D OF122_19635 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D OF122_14120 SCP2 sterol-binding domain-containing protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D OF122_10795 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism C 99999 Others D OF122_03750 VOC family protein K15975 K15975; glyoxalase family protein D OF122_04820 ring-cleaving dioxygenase K15975 K15975; glyoxalase family protein D OF122_10100 DoxX family protein K15977 K15977; putative oxidoreductase D OF122_16105 DoxX family protein K15977 K15977; putative oxidoreductase D OF122_16235 DoxX family protein K15977 K15977; putative oxidoreductase D OF122_02920 prolyl oligopeptidase family serine peptidase K06999 K06999; phospholipase/carboxylesterase D OF122_03755 alpha/beta hydrolase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D OF122_00705 cold-shock protein K03704 cspA; cold shock protein D OF122_06280 cold-shock protein K03704 cspA; cold shock protein D OF122_11550 CspA family cold shock protein K03704 cspA; cold shock protein D OF122_17040 cold-shock protein K03704 cspA; cold shock protein D OF122_17065 cold-shock protein K03704 cspA; cold shock protein D OF122_00675 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D OF122_16385 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D OF122_00075 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein D OF122_06665 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein D OF122_07030 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein D OF122_01560 ligase-associated DNA damage response exonuclease K07577 K07577; putative mRNA 3-end processing factor C 99975 Protein processing D OF122_00920 ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D OF122_09605 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D OF122_10145 tig; trigger factor K03545 tig; trigger factor D OF122_19110 urease accessory protein UreE K03187 ureE; urease accessory protein D OF122_19115 urease accessory protein UreF K03188 ureF; urease accessory protein D OF122_19120 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D OF122_19065 urease accessory protein UreD K03190 ureD; urease accessory protein D OF122_19075 HupE/UreJ family protein K03192 ureJ; urease accessory protein D OF122_11950 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D OF122_18070 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein D OF122_05715 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D OF122_08625 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D OF122_17545 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D OF122_06480 AAA family ATPase K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D OF122_00380 YraN family protein K07460 yraN; putative endonuclease D OF122_06135 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D OF122_09680 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D OF122_09470 replication-associated recombination protein A K07478 ycaJ; putative ATPase D OF122_06865 transposase K07481 K07481; transposase, IS5 family D OF122_02045 transposase K07483 K07483; transposase D OF122_02035 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D OF122_00230 IS110 family transposase K07486 K07486; transposase D OF122_02040 IS110 family transposase K07486 K07486; transposase D OF122_00275 IS3 family transposase K07497 K07497; putative transposase D OF122_01730 IS3 family transposase K07497 K07497; putative transposase D OF122_02150 IS3 family transposase K07497 K07497; putative transposase D OF122_02230 IS3 family transposase K07497 K07497; putative transposase D OF122_03460 IS3 family transposase K07497 K07497; putative transposase D OF122_03610 IS3 family transposase K07497 K07497; putative transposase D OF122_04570 IS3 family transposase K07497 K07497; putative transposase D OF122_07240 IS3 family transposase K07497 K07497; putative transposase D OF122_12305 IS3 family transposase K07497 K07497; putative transposase D OF122_13855 IS3 family transposase K07497 K07497; putative transposase D OF122_14160 IS3 family transposase K07497 K07497; putative transposase D OF122_14570 IS3 family transposase K07497 K07497; putative transposase D OF122_15735 IS3 family transposase K07497 K07497; putative transposase D OF122_18615 IS3 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D OF122_05305 type I restriction enzyme HsdR N-terminal domain-containing protein K07504 K07504; predicted type IV restriction endonuclease D OF122_17560 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D OF122_16995 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D OF122_15085 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family C 99978 Cell growth D OF122_00765 septation protein A K06190 ispZ; intracellular septation protein D OF122_12820 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D OF122_01335 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D OF122_00915 typA; translational GTPase TypA K06207 typA; GTP-binding protein D OF122_04140 ChrR family anti-sigma-E factor K07167 chrR; putative transcriptional regulator D OF122_00090 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D OF122_00365 glycoside hydrolase family 25 protein K07273 acm; lysozyme D OF122_03880 NfeD family protein K07340 ybbJ; inner membrane protein D OF122_14875 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D OF122_14865 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D OF122_14880 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH C 99994 Others D OF122_16800 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D OF122_16975 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D OF122_07170 NAD(P)/FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D OF122_14095 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO B B 09194 Poorly characterized C 99996 General function prediction only D OF122_13450 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D OF122_06040 tRNA-binding protein K06878 K06878; tRNA-binding protein D OF122_02395 group III truncated hemoglobin K06886 glbN; hemoglobin D OF122_15475 group III truncated hemoglobin K06886 glbN; hemoglobin D OF122_06980 patatin-like phospholipase family protein K07001 K07001; NTE family protein D OF122_10660 patatin-like phospholipase family protein K07001 K07001; NTE family protein D OF122_16010 patatin-like phospholipase family protein K07001 K07001; NTE family protein D OF122_07775 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D OF122_17490 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily D OF122_10035 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D OF122_10050 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D OF122_10460 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D OF122_00555 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D OF122_15250 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D OF122_18670 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D OF122_14790 VOC family protein K04750 phnB; PhnB protein D OF122_18930 VOC family protein K04750 phnB; PhnB protein D OF122_04960 heme-binding protein K11477 glcG; glc operon protein GlcG D OF122_05140 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D OF122_16670 cytochrome c oxidase assembly protein K02351 K02351; putative membrane protein D OF122_09105 cytochrome c oxidase assembly protein K02351 K02351; putative membrane protein D OF122_15685 LemA family protein K03744 lemA; LemA protein D OF122_03795 SlyX family protein K03745 slyX; SlyX protein D OF122_03410 DUF1304 domain-containing protein K08987 K08987; putative membrane protein D OF122_08230 YcjF family protein K08990 ycjF; putative membrane protein C 99997 Function unknown D OF122_04350 alpha/beta hydrolase K06889 K06889; uncharacterized protein D OF122_04295 hypothetical protein K06889 K06889; uncharacterized protein D OF122_00845 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein D OF122_08235 YcjX family protein K06918 K06918; uncharacterized protein D OF122_10375 ATP-binding protein K06923 K06923; uncharacterized protein D OF122_16485 pdeM; ligase-associated DNA damage response endonuclease PdeM K06953 K06953; uncharacterized protein D OF122_04150 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein D OF122_03765 N-acetyltransferase K06975 K06975; uncharacterized protein D OF122_15060 N-acetyltransferase K06975 K06975; uncharacterized protein D OF122_05540 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D OF122_17005 VOC family protein K06991 K06991; uncharacterized protein D OF122_03420 VOC family protein K06996 K06996; uncharacterized protein D OF122_10440 efflux RND transporter permease subunit K07003 K07003; uncharacterized protein D OF122_05420 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D OF122_10025 alpha/beta hydrolase K07018 K07018; uncharacterized protein D OF122_13785 lactoylglutathione lyase K07032 K07032; uncharacterized protein D OF122_06345 zinc metallopeptidase K07054 K07054; uncharacterized protein D OF122_05095 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D OF122_09220 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D OF122_08700 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D OF122_18530 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D OF122_04340 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D OF122_11435 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D OF122_13245 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D OF122_16100 TSUP family transporter K07090 K07090; uncharacterized protein D OF122_16475 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D OF122_00730 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D OF122_17050 PhoX family phosphatase K07093 K07093; uncharacterized protein D OF122_14750 YeeE/YedE family protein K07112 K07112; uncharacterized protein D OF122_18425 YeeE/YedE family protein K07112 K07112; uncharacterized protein D OF122_18430 YeeE/YedE family protein K07112 K07112; uncharacterized protein D OF122_10925 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D OF122_16250 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D OF122_04400 sel1 repeat family protein K07126 K07126; uncharacterized protein D OF122_00690 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein D OF122_08835 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D OF122_11545 DUF192 domain-containing protein K09005 K09005; uncharacterized protein D OF122_06370 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D OF122_00975 DUF167 family protein K09131 K09131; uncharacterized protein D OF122_15200 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D OF122_17725 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein D OF122_04155 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein D OF122_03065 DUF1284 domain-containing protein K09706 K09706; uncharacterized protein D OF122_08915 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D OF122_01055 YciI family protein K09780 K09780; uncharacterized protein D OF122_01140 YciI family protein K09780 K09780; uncharacterized protein D OF122_15630 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D OF122_14090 YbaN family protein K09790 K09790; uncharacterized protein D OF122_00685 Trm112 family protein K09791 K09791; uncharacterized protein D OF122_03905 DUF459 domain-containing protein K09795 K09795; uncharacterized protein D OF122_01325 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein D OF122_06435 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D OF122_07080 hypothetical protein K05952 K05952; uncharacterized protein D OF122_12360 hypothetical protein K05952 K05952; uncharacterized protein D OF122_06845 DUF2309 domain-containing protein K09822 K09822; uncharacterized protein D OF122_16325 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D OF122_09620 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein D OF122_17900 DMT family protein K09922 K09922; uncharacterized protein D OF122_14505 DUF2059 domain-containing protein K09924 K09924; uncharacterized protein D OF122_17000 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D OF122_10110 DUF692 domain-containing protein K09930 K09930; uncharacterized protein D OF122_07920 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein D OF122_16265 YegP family protein K09946 K09946; uncharacterized protein D OF122_07010 DUF779 domain-containing protein K09959 K09959; uncharacterized protein D OF122_10585 nucleotidyltransferase family protein K09962 K09962; uncharacterized protein D OF122_08715 TraB/GumN family protein K09973 K09973; uncharacterized protein D OF122_09760 YjhX family toxin K09982 K09982; uncharacterized protein D OF122_07845 SspB family protein K09985 K09985; uncharacterized protein D OF122_04345 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein D OF122_00250 metal-sensing transcriptional repressor K07807 K07807; uncharacterized protein D OF122_19010 RNA-binding protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024