+C Secretion system KO
#
Secretion System - Pseudomonas protegens Pf-5
%
!
AType I secretion system
B alpha-Hemolysin/cyclolysin transporter
C PFL_0537 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
C PFL_2984 fitE; type I secretion outer membrane protein FitE K12340 tolC; outer membrane protein
C PFL_2945 outer membrane efflux protein K12340 tolC; outer membrane protein
B RTX toxin transporter
C PFL_2980 fitA; type I secretion system ATPase FitA K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
C PFL_2982 fitC; type I secretion system ATPase FitC K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
C PFL_2981 fitB; type I secretion membrane fusion protein FitB K12532 rtxD; membrane fusion protein, RTX toxin transport system
C PFL_0537 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
C PFL_2984 fitE; type I secretion outer membrane protein FitE K12340 tolC; outer membrane protein
C PFL_2945 outer membrane efflux protein K12340 tolC; outer membrane protein
B Multiple protein transporter
C PFL_3208 aprD; ABC transporter K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
C PFL_5376 hasD; type 1 secretion system ATPase HasD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
C PFL_5375 hasE; type 1 secretion system membrane fusion protein HasE K12537 hasE; membrane fusion protein, type I secretion system
C PFL_3207 aprE; membrane fusion protein K12537 hasE; membrane fusion protein, type I secretion system
C PFL_5374 hasF; type 1 secretion system outer membrane protein HasF K12538 hasF; outer membrane protein, type I secretion system
C PFL_3206 aprF; outer membrane protein K12538 hasF; outer membrane protein, type I secretion system
C PFL_0537 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
C PFL_2984 fitE; type I secretion outer membrane protein FitE K12340 tolC; outer membrane protein
C PFL_2945 outer membrane efflux protein K12340 tolC; outer membrane protein
B Adhesin protein transporter
C PFL_0135 type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
C PFL_0136 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
C PFL_0134 type I secretion outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
B RaxAB-RaxC type I secretion system protein
C PFL_0537 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
C PFL_2984 fitE; type I secretion outer membrane protein FitE K12340 tolC; outer membrane protein
C PFL_2945 outer membrane efflux protein K12340 tolC; outer membrane protein
#
AType II secretion system
B General secretion pathway protein
C PFL_2750 putative general secretion pathway protein C K02452 gspC; general secretion pathway protein C
C PFL_2756 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D
C PFL_2757 gspE; general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
C PFL_5946 Type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
C PFL_4678 pilQ; pilus assembly protein PilQ K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
C PFL_2758 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
C PFL_2752 gspG; general secretion pathway protein G K02456 gspG; general secretion pathway protein G
C PFL_2749 gspH; general secretion pathway protein H K02457 gspH; general secretion pathway protein H
C PFL_2751 gspI; general secretion pathway protein I K02458 gspI; general secretion pathway protein I
C PFL_2748 putative general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
C PFL_2753 putative general secretion pathway protein K K02460 gspK; general secretion pathway protein K
C PFL_2754 gspL; general secretion pathway protein L K02461 gspL; general secretion pathway protein L
C PFL_2755 general secretion pathway protein M K02462 gspM; general secretion pathway protein M
C PFL_5289 pilD; type IV pilus prepilin peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
B Pilin secretion/fimbrial assembly protein
C PFL_5287 pilA; type IV pilus protein PilA K02650 pilA; type IV pilus assembly protein PilA
C PFL_5288 pilC; type IV pilus biogenesis protein PilC K02653 pilC; type IV pilus assembly protein PilC
C PFL_5289 pilD; type IV pilus prepilin peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C PFL_5311 type IV pilus biogenesis protein K02655 pilE; type IV pilus assembly protein PilE
C PFL_4956 pilF; type IV pilus biogenesis/stability protein PilF K02656 pilF; type IV pilus assembly protein PilF
C PFL_5827 pilG; type IV pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
C PFL_5826 pilH; type IV pilus response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
C PFL_5825 pilI; type IV pilus biogenesis protein PilI K02659 pilI; twitching motility protein PilI
C PFL_5824 pilJ; type IV pilus biogenesis protein PilJ K02660 pilJ; twitching motility protein PilJ
C PFL_0445 pilM; type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
C PFL_0446 pilN; type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
C PFL_0447 pilO_2; type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
C PFL_0448 pilP_1; type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
C PFL_0449 pilQ; type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
C PFL_5837 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
C PFL_5315 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
C PFL_5314 prepilin-type N-terminal cleavage/methylation domain protein K02672 pilW; type IV pilus assembly protein PilW
C PFL_5313 conserved hypothetical protein K02673 pilX; type IV pilus assembly protein PilX
C PFL_5312 putative type IV pilus-associated protein K02674 pilY1; type IV pilus assembly protein PilY1
C PFL_5316 putative pilin K08085 fimU; type IV fimbrial biogenesis protein FimU
B Tight adherence (Tad) export apparatus
C PFL_0689 peptidase, A24 family K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
C PFL_0698 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
C PFL_0697 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
C PFL_0696 conserved hypothetical protein K02282 cpaE; pilus assembly protein CpaE
C PFL_0695 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C PFL_0694 type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
C PFL_0693 type II secretion system protein F domain protein K12511 tadC; tight adherence protein C
C PFL_0692 tetratricopeptide repeat domain lipoprotein K27079 tadD; tight adherence protein D
C PFL_0686 conserved hypothetical protein K27080 tadG; tight adherence protein G
C PFL_0699 Flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA
B Toxin co-regulated pilus biosynthesis protein
B MSHA pilus biogenesis protein
B Type IVa pilus homolog protein
C PFL_5289 pilD; type IV pilus prepilin peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C PFL_5837 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
C PFL_5840 YggT family protein K02221 yggT; YggT family protein
B Archaeal flagellar protein
B Competence-related DNA transformation transporter (DNA-T) core components
C PFL_4304 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA
C PFL_1775 DNA internalization competence protein ComEC/Rec2-like protein K02238 comEC; competence protein ComEC
B Competence-related DNA transformation transporter (DNA-T) related proteins
#
AType III secretion system
B Type III secretion core apparatus
B Type III secretion related proteins
B Flagellar export apparatus
C PFL_1664 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
C PFL_1654 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
C PFL_1678 conserved hypothetical protein K04061 flhB2; flagellar biosynthesis protein
C PFL_1638 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
C PFL_1640 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
C PFL_1641 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
C PFL_1649 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
C PFL_1650 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
C PFL_1651 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
C PFL_1652 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
C PFL_1653 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
#
AType IV secretion system
B Conjugal DNA-protein transfer (VirB/D) protein
B DNA uptake competence system protein
B Conjugal transfer pilus assembly protein
C PFL_6255 conserved hypothetical protein K12055 K12055; chromosome partitioning related protein ParA
C PFL_4751 traI; integrating conjugative element relaxase, PFGI-1 class K12070 traI; conjugal transfer pilus assembly protein TraI
C PFL_4696 traD; conjugative coupling factor TraD, PFGI-1 class K12071 traD; conjugal transfer pilus assembly protein TraD
C PFL_1102 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
B Pertussis toxin exporter
B Cag pathogenicity island (PAI) protein
B Icm/Dot secretion system protein
B Trb secretion system protein
#
AType V secretion system
B Autotransporter-1 (AT-1) family
C PFL_4376 outer membrane autotransporter K12678 aidA-I; autotransporter family porin
C PFL_3203 pspB; serine protease B K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
C PFL_3204 pspA; serine protease A K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
B Autotransporter-2 (AT-2) family
B Two-partner secretion (TPS) family
C PFL_4236 hemolysin secretion/activation protein, ShlB family K11017 shlB; hemolysin activation/secretion protein
#
AType VI secretion system
B Imp/Vas secretion system core components
C PFL_6081 tssM; type VI secretion protein TssM K11891 impL; type VI secretion system protein ImpL
C PFL_6082 tssL; type VI secretion protein TssL K11892 impK; type VI secretion system protein ImpK
C PFL_6083 tssK; type VI secretion protein TssK K11893 impJ; type VI secretion system protein ImpJ
C PFL_6092 tssG; type VI secretion protein TssG K11895 impH; type VI secretion system protein ImpH
C PFL_6091 tssF; type VI secretion protein TssF K11896 impG; type VI secretion system protein ImpG
C PFL_6090 tssE; type VI secretion protein TssE K11897 impF; type VI secretion system protein ImpF
C PFL_6088 tssC; type VI secretion protein TssC K11900 impC; type VI secretion system protein ImpC
C PFL_6087 tssB; type VI secretion protein TssB K11901 impB; type VI secretion system protein ImpB
C PFL_6086 tssA; type VI secretion protein TssA K11902 impA; type VI secretion system protein ImpA
C PFL_6089 hcp; type VI secretion system effector Hcp K11903 hcp; type VI secretion system secreted protein Hcp
C PFL_6094 vgrG; type VI secretion protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
C PFL_3004 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
C PFL_2812 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
C PFL_6084 tssJ; type VI secretion lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
C PFL_6093 clpV; type VI secretion ATPase ClpV K11907 vasG; type VI secretion system protein VasG
B Imp/Vas secretion system related proteins
C PFL_6080 tagF; type VI secretion-associated protein TagF K11890 impM; type VI secretion system protein ImpM
C PFL_6078 ppkA; serine/threonine protein kinase PpkA K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
C PFL_6085 fha; type VI secretion protein Fha K11913 fha1; type VI secretion system protein
C PFL_6079 pppA; serine/threonine phosphoprotein phosphatase PppA K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16]
C PFL_2926 sigma-54 dependent transcriptional regulator K11917 sfa3; sigma-54 dependent transcriptional regulator
#
AType VII secretion system
B ESX secretion system protein
#
AChaperone-usher system
B Type 1 pilus assembly protein
C PFL_1462 cupB1; type I pilus biogensis protein CupB1 K07345 fimA; major type 1 subunit fimbrin (pilin)
C PFL_3922 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
C PFL_3951 putative type I pilus usher pathway chaperone CsuC K07346 fimC; fimbrial chaperone protein
C PFL_3924 fimbrial usher protein K07347 fimD; outer membrane usher protein
C PFL_3950 putative type I pili usher protein CsuD K07347 fimD; outer membrane usher protein
C PFL_1464 cupB3; outer membrane usher protein CupB3 K07347 fimD; outer membrane usher protein
C PFL_3949 putative type I pilus protein CsuE K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C PFL_3952 putative type I pilus protein CsuB K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C PFL_3955 putative type I pilus protein CsuA/B K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C PFL_3954 putative type I pilus protein CsuA/B K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C PFL_3953 putative type I pilus protein CsuA/B K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
B P pilus assembly protein
B Mat/Ecp fimbriae assembly protein
#
AExtracellular nucleation-precipitation pathway
B Curli assembly protein
#
ASec (secretion) system
B Prokaryotic Sec-SRP core components
C PFL_4781 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
C PFL_0374 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
C PFL_4972 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
C PFL_5595 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
C PFL_4971 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
C PFL_5562 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
C PFL_1093 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C PFL_5857 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
C PFL_4973 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
C PFL_6230 yidC_oxaA; inner-membrane protein insertion factor YidC/OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
B Prokaryotic Sec-SRP related proteins
B Eukaryotic Sec-SRP protein
C PFL_1093 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
#
ATwin-arginine translocation (Tat) system
B Twin-arginine translocation (Tat) pathway protein
C PFL_0422 tatA; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
C PFL_0421 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
C PFL_0420 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: December 11, 2023