+D GENES KO #

  KEGG Orthology (KO) - Paludibacter propionicigenes

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ppn00010] D Palpr_0175 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Palpr_3045 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Palpr_2798 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Palpr_0153 pyrophosphate-dependent phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D Palpr_1919 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Palpr_1922 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Palpr_1264 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Palpr_1378 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Palpr_2610 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Palpr_1746 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Palpr_2750 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Palpr_1047 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Palpr_2245 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Palpr_0100 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Palpr_2286 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Palpr_0370 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Palpr_1927 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Palpr_0520 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Palpr_1928 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Palpr_0519 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Palpr_2608 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Palpr_2282 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Palpr_2011 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Palpr_2776 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Palpr_2138 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Palpr_0750 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Palpr_0920 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Palpr_2757 HAD-superfamily hydrolase, subfamily IA, variant 3 K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10] D Palpr_0854 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Palpr_2112 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:ppn00020] D Palpr_1042 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Palpr_1041 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Palpr_1044 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Palpr_2286 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Palpr_1927 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Palpr_0520 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Palpr_1928 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Palpr_0519 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Palpr_0518 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Palpr_0521 hypothetical protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Palpr_1415 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Palpr_1414 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Palpr_2981 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Palpr_2983 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Palpr_2980 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Palpr_1879 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Palpr_2611 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Palpr_0912 Pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Palpr_2112 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Palpr_0370 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:ppn00030] D Palpr_3045 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Palpr_2270 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Palpr_2271 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D Palpr_1001 3-carboxymuconate cyclase-like protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D Palpr_0566 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Palpr_2747 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Palpr_0214 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Palpr_2309 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Palpr_2218 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Palpr_2195 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Palpr_0854 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Palpr_0896 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Palpr_0557 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Palpr_0558 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Palpr_1919 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Palpr_1922 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Palpr_2798 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Palpr_0153 pyrophosphate-dependent phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:ppn00040] D Palpr_0798 Cupin 2 conserved barrel domain protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D Palpr_0559 D-glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D Palpr_0564 D-mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D Palpr_0443 D-mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D Palpr_1627 Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D Palpr_0973 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Palpr_0247 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Palpr_2608 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Palpr_2282 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Palpr_2781 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D Palpr_2747 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Palpr_2779 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D Palpr_2778 L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16] D Palpr_0696 Carbohydrate kinase, FGGY K00854 xylB; xylulokinase [EC:2.7.1.17] D Palpr_0695 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] C 00051 Fructose and mannose metabolism [PATH:ppn00051] D Palpr_1818 Mannan endo-1,4-beta-mannosidase K19355 MAN; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Palpr_0107 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Palpr_1078 mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Palpr_0162 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Palpr_1727 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Palpr_0249 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Palpr_0248 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D Palpr_2798 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Palpr_0153 pyrophosphate-dependent phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D Palpr_0695 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Palpr_1919 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Palpr_1922 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Palpr_1264 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Palpr_2218 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:ppn00052] D Palpr_2776 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Palpr_2138 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Palpr_0750 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Palpr_0920 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Palpr_2139 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Palpr_1079 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Palpr_0950 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Palpr_0854 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Palpr_0175 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Palpr_0075 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_0579 glycoside hydrolase family 42 domain 5 loop region K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_1633 glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_1817 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_2137 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_0069 glycoside hydrolase family 35 K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D Palpr_1630 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Palpr_1815 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Palpr_1626 Glycosyl hydrolase family 98 putative carbohydrate binding module K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Palpr_2798 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Palpr_0339 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Palpr_2976 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Palpr_0667 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:ppn00053] D Palpr_0973 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Palpr_0247 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Palpr_1627 Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D Palpr_2608 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Palpr_2282 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Palpr_2781 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] C 00500 Starch and sucrose metabolism [PATH:ppn00500] D Palpr_0339 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Palpr_2976 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Palpr_0667 Glycoside hydrolase 97 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Palpr_2918 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2117 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2120 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2004 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2005 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2557 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_0341 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1635 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_0243 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1269 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1634 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1811 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_1774 non-processive endocellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_0244 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_0669 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_0671 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_1662 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_0628 glycoside hydrolase family 9 domain protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_2972 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_1813 cellobiose phosphorylase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20] D Palpr_0970 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Palpr_1303 glycogen synthase (UDP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21] D Palpr_1479 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Palpr_0151 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Palpr_0849 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41] D Palpr_0114 ATP synthase F1 subcomplex epsilon subunit K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1] D Palpr_0895 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Palpr_1284 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Palpr_0854 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Palpr_0175 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Palpr_3045 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Palpr_0107 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ppn00520] D Palpr_0133 Chitinase K20547 CHIB; basic endochitinase B [EC:3.2.1.14] D Palpr_1197 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Palpr_2723 glucosamine/galactosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D Palpr_0107 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Palpr_0800 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Palpr_2710 glucokinase regulatory-like protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D Palpr_0924 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Palpr_0004 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Palpr_1122 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Palpr_0599 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Palpr_0597 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D Palpr_0598 hexapeptide transferase family protein, putative acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D Palpr_1323 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D Palpr_0979 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Palpr_0959 UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Palpr_2780 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Palpr_0342 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Palpr_0584 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Palpr_0582 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Palpr_1631 glycoside hydrolase family 43 K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55] D Palpr_1628 glycoside hydrolase family 43 K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55] D Palpr_1629 glycoside hydrolase family 43 K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55] D Palpr_2118 Xylan 1,4-beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Palpr_1658 Xylan 1,4-beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Palpr_2003 coagulation factor 5/8 type domain protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Palpr_2917 coagulation factor 5/8 type domain protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Palpr_1656 glycoside hydrolase family 43 K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Palpr_0175 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Palpr_0854 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Palpr_0973 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Palpr_0247 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Palpr_2139 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Palpr_1079 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Palpr_0950 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Palpr_3045 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Palpr_1078 mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Palpr_0162 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Palpr_1727 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Palpr_0249 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Palpr_0248 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D Palpr_0970 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Palpr_0969 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Palpr_0972 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D Palpr_0967 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10] C 00620 Pyruvate metabolism [PATH:ppn00620] D Palpr_2011 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Palpr_0370 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Palpr_1927 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Palpr_0520 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Palpr_1928 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Palpr_0519 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Palpr_2286 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Palpr_2608 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Palpr_2282 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Palpr_2063 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Palpr_2064 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Palpr_2066 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Palpr_2245 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Palpr_0685 putative metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Palpr_0613 allosteric NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Palpr_1268 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Palpr_0912 Pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Palpr_2611 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Palpr_1879 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Palpr_2112 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Palpr_0100 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Palpr_0052 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Palpr_1434 pyruvate carboxyltransferase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ppn00630] D Palpr_2011 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Palpr_2611 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Palpr_1042 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Palpr_1041 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Palpr_0393 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Palpr_1030 heterodimeric methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Palpr_1031 heterodimeric methylmalonyl-CoA mutase large subunit precursor K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Palpr_1729 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Palpr_1104 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Palpr_0486 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Palpr_0097 glycine dehydrogenase (decarboxylating) beta subunit; glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Palpr_0614 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Palpr_2286 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Palpr_2857 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Palpr_0557 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Palpr_2909 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:ppn00640] D Palpr_2011 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Palpr_2063 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Palpr_2064 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Palpr_2066 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Palpr_2286 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Palpr_0803 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Palpr_0393 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Palpr_1030 heterodimeric methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Palpr_1031 heterodimeric methylmalonyl-CoA mutase large subunit precursor K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Palpr_1414 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Palpr_1415 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Palpr_0847 Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:ppn00650] D Palpr_2065 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Palpr_2900 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7] D Palpr_3030 phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D Palpr_1268 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Palpr_0390 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Palpr_0391 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Palpr_2981 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Palpr_2983 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Palpr_2980 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Palpr_0370 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Palpr_1927 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Palpr_0520 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Palpr_1928 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Palpr_0519 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Palpr_0137 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Palpr_0138 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:ppn00660] D Palpr_0137 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Palpr_0138 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Palpr_1414 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Palpr_1415 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Palpr_0056 (R)-citramalate synthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21] D Palpr_0053 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Palpr_0055 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Palpr_0058 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:ppn00562] D Palpr_2870 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Palpr_2417 Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Palpr_1264 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ppn00190] D Palpr_0353 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Palpr_0354 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Palpr_0355 NADH dehydrogenase subunit D; NADH dehydrogenase subunit C K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D Palpr_0356 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Palpr_0357 putative NADH dehydrogenase I subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Palpr_0358 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D Palpr_0359 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Palpr_0360 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Palpr_0361 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Palpr_0362 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Palpr_0680 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Palpr_2981 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Palpr_2983 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Palpr_2980 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Palpr_2936 UbiA prenyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Palpr_2934 caa(3)-type oxidase, subunit IV K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9] D Palpr_2933 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D Palpr_2932 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D Palpr_2935 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D Palpr_1857 cytochrome bd quinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Palpr_1856 cytochrome bd quinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Palpr_2446 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Palpr_2439 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Palpr_2447 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Palpr_2445 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Palpr_2440 ATPase, F1 complex, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Palpr_2442 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Palpr_2444 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Palpr_2443 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Palpr_0760 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D Palpr_1752 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms [PATH:ppn00710] D Palpr_2610 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Palpr_1378 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Palpr_1919 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Palpr_1922 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Palpr_0214 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Palpr_2218 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Palpr_1264 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Palpr_2747 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Palpr_2112 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Palpr_0100 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Palpr_0613 allosteric NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Palpr_2611 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Carbon fixation pathways in prokaryotes [PATH:ppn00720] D Palpr_0370 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Palpr_0100 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Palpr_0912 Pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Palpr_2611 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Palpr_1879 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Palpr_2981 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Palpr_2983 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Palpr_2980 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Palpr_1415 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Palpr_1414 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Palpr_1927 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Palpr_0520 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Palpr_1928 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Palpr_0519 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Palpr_0518 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Palpr_0521 hypothetical protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Palpr_1044 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Palpr_1041 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Palpr_0393 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Palpr_1030 heterodimeric methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Palpr_1031 heterodimeric methylmalonyl-CoA mutase large subunit precursor K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Palpr_1228 5; methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Palpr_1668 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Palpr_2066 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Palpr_2063 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Palpr_2064 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Palpr_2011 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:ppn00680] D Palpr_0486 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Palpr_1047 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Palpr_2611 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Palpr_1919 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Palpr_1922 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Palpr_2798 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Palpr_2063 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Palpr_2064 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Palpr_2066 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Palpr_2011 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Palpr_1746 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Palpr_2750 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Palpr_1740 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Palpr_1741 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Palpr_1201 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:ppn00910] D Palpr_1363 Fe-only nitrogenase FeFe protein subunit AnfD precursor K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Palpr_1426 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Palpr_1361 Fe-only nitrogenase FeFe protein subunit AnfK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Palpr_1427 Mo-nitrogenase MoFe protein subunit NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Palpr_1366 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Palpr_1423 Mo-nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH D Palpr_1362 Fe-only nitrogenase, delta subunit K00531 anfG; nitrogenase delta subunit [EC:1.18.6.1] D Palpr_0783 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Palpr_0917 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Palpr_0190 glutamate dehydrogenase (NAD) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Palpr_1104 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Palpr_1105 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Palpr_2813 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Palpr_1106 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Palpr_1003 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:ppn00920] D Palpr_2547 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Palpr_2546 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Palpr_2749 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Palpr_2548 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Palpr_2549 sulfite reductase (NADPH) flavoprotein, alpha chain K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D Palpr_2550 sulfite reductase (NADPH) beta subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D Palpr_1617 Sulfite reductase (ferredoxin) K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D Palpr_2320 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Palpr_2398 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Palpr_1595 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Palpr_2587 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Palpr_1589 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Palpr_1608 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Palpr_0193 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ppn00061] D Palpr_2156 acyl carrier protein K02078 acpP; acyl carrier protein D Palpr_0687 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Palpr_1842 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Palpr_1150 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Palpr_0288 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Palpr_2155 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Palpr_0380 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Palpr_2426 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D Palpr_1739 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Palpr_0827 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_1211 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2153 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2403 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2908 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D Palpr_0827 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_1211 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2153 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2403 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2908 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ppn00561] D Palpr_2608 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Palpr_2282 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Palpr_0028 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Palpr_0067 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Palpr_0676 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Palpr_1899 undecaprenol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Palpr_1537 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Palpr_1630 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Palpr_1815 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Palpr_1626 Glycosyl hydrolase family 98 putative carbohydrate binding module K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:ppn00564] D Palpr_3046 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Palpr_0028 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Palpr_0067 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Palpr_0676 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Palpr_1899 undecaprenol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Palpr_2941 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Palpr_0157 Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D Palpr_0158 Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D Palpr_2848 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Palpr_1935 CDP-diacylglycerol/serineO-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Palpr_2193 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Palpr_2418 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D Palpr_1367 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:ppn00600] D Palpr_0237 Glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45] D Palpr_0238 Glucan endo-1,6-beta-glucosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45] D Palpr_0075 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_0579 glycoside hydrolase family 42 domain 5 loop region K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_1633 glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_1817 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_2137 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_1630 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Palpr_1815 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Palpr_1626 Glycosyl hydrolase family 98 putative carbohydrate binding module K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Palpr_1197 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ppn00230] D Palpr_0854 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Palpr_0896 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Palpr_0799 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Palpr_2164 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Palpr_2157 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Palpr_0538 formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D Palpr_0764 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Palpr_1285 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Palpr_2856 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Palpr_0489 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Palpr_2192 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Palpr_2056 IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Palpr_1696 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Palpr_1840 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Palpr_3027 5'-nucleotidase; exopolyphosphatase; 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Palpr_2188 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Palpr_2108 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Palpr_2346 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Palpr_2343 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Palpr_1884 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Palpr_2390 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Palpr_2364 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Palpr_1552 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Palpr_0815 CMP/dCMP deaminase zinc-binding protein K01487 guaD; guanine deaminase [EC:3.5.4.3] D Palpr_0683 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Palpr_0610 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Palpr_1982 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Palpr_1476 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Palpr_1885 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Palpr_1753 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Palpr_0522 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Palpr_2969 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Palpr_0730 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D Palpr_1380 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D Palpr_2344 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Palpr_2547 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Palpr_2546 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:ppn00240] D Palpr_0512 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Palpr_0951 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Palpr_0482 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Palpr_0483 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Palpr_0933 amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Palpr_0736 dihydroorotate oxidase B, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Palpr_0737 dihydroorotate oxidase B, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Palpr_1908 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Palpr_0777 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Palpr_2487 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Palpr_2390 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Palpr_0544 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Palpr_2887 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Palpr_2796 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Palpr_2179 AAA ATPase K00876 udk; uridine kinase [EC:2.7.1.48] D Palpr_1198 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Palpr_1840 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Palpr_3027 5'-nucleotidase; exopolyphosphatase; 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Palpr_0424 purine or other phosphorylase family 1 K00757 udp; uridine phosphorylase [EC:2.4.2.3] D Palpr_2108 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Palpr_2051 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Palpr_0986 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Palpr_0610 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Palpr_3008 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Palpr_2021 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Palpr_2354 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D Palpr_0860 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ppn00250] D Palpr_2603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_1065 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_2922 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Palpr_1845 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Palpr_0858 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Palpr_1107 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Palpr_0199 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3] D Palpr_1887 alanine dehydrogenase/PNT domain protein K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Palpr_1204 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Palpr_1897 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Palpr_1906 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Palpr_2969 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Palpr_2192 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Palpr_0482 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Palpr_0483 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Palpr_1105 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Palpr_2813 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Palpr_1106 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Palpr_0190 glutamate dehydrogenase (NAD) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Palpr_1000 delta-1-pyrroline-5-carboxylate dehydrogenase; L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Palpr_1104 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Palpr_0512 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Palpr_0951 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Palpr_0800 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Palpr_0799 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ppn00260] D Palpr_0234 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Palpr_2973 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Palpr_0165 aspartate kinase; homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Palpr_2098 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Palpr_2751 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Palpr_0590 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Palpr_0486 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Palpr_1746 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Palpr_2750 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Palpr_1740 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Palpr_1741 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Palpr_1201 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Palpr_0301 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Palpr_0302 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D Palpr_0097 glycine dehydrogenase (decarboxylating) beta subunit; glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Palpr_0614 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Palpr_2286 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Palpr_2857 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Palpr_1935 CDP-diacylglycerol/serineO-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Palpr_0296 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Palpr_2896 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Palpr_2890 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Palpr_0681 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ppn00270] D Palpr_2320 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Palpr_2398 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Palpr_1595 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Palpr_2587 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Palpr_1589 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Palpr_1608 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Palpr_1351 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Palpr_1747 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Palpr_1236 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Palpr_0647 MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Palpr_2346 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Palpr_2402 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D Palpr_2392 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Palpr_0234 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Palpr_2973 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Palpr_0165 aspartate kinase; homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Palpr_2098 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Palpr_0193 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Palpr_1214 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Palpr_2586 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Palpr_1609 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Palpr_1511 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Palpr_1808 glutamate/cysteine ligase,/amino acid ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Palpr_2603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_1065 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_2611 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Palpr_0296 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Palpr_1740 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Palpr_1741 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:ppn00280] D Palpr_1511 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Palpr_2286 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Palpr_0393 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Palpr_1030 heterodimeric methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Palpr_1031 heterodimeric methylmalonyl-CoA mutase large subunit precursor K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ppn00290] D Palpr_0056 (R)-citramalate synthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21] D Palpr_0053 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Palpr_0055 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Palpr_0058 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Palpr_0137 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Palpr_0138 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Palpr_0140 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Palpr_0136 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Palpr_1511 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Palpr_0052 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:ppn00300] D Palpr_0234 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Palpr_2973 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Palpr_0165 aspartate kinase; homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Palpr_2098 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Palpr_1060 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Palpr_1514 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Palpr_0778 hypothetical protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Palpr_2180 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Palpr_1094 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Palpr_1095 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Palpr_1524 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Palpr_0801 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Palpr_2974 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Palpr_1503 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Palpr_2622 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Palpr_0535 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] C 00310 Lysine degradation D Palpr_2286 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:ppn00220] D Palpr_1897 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Palpr_1906 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Palpr_1104 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Palpr_0512 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Palpr_0951 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Palpr_0190 glutamate dehydrogenase (NAD) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Palpr_2603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_1065 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_1807 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D Palpr_1695 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Palpr_1989 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Palpr_2180 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Palpr_1688 peptidase M20 K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:ppn00330] D Palpr_2850 Orn/DAP/Arg decarboxylase 2 K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Palpr_2820 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D Palpr_2819 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D Palpr_2823 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D Palpr_1077 GCN5-related N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D Palpr_2013 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Palpr_1000 delta-1-pyrroline-5-carboxylate dehydrogenase; L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Palpr_1703 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Palpr_1702 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Palpr_2603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_1065 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:ppn00340] D Palpr_1208 ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Palpr_0857 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Palpr_0743 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Palpr_1300 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Palpr_1159 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Palpr_1349 imidazoleglycerol-phosphate dehydratase; histidinol-phosphate phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D Palpr_3041 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Palpr_0756 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D Palpr_3042 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:ppn00350] D Palpr_2603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_1065 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_3041 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Palpr_1828 Tryptophanase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2] C 00360 Phenylalanine metabolism [PATH:ppn00360] D Palpr_1405 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Palpr_2065 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Palpr_2603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_1065 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_3041 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Palpr_1681 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00380 Tryptophan metabolism D Palpr_2286 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ppn00400] D Palpr_1516 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Palpr_2246 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Palpr_1843 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Palpr_2791 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Palpr_3050 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Palpr_2891 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Palpr_2892 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Palpr_2893 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Palpr_2895 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Palpr_2894 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Palpr_2896 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Palpr_2890 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Palpr_0681 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Palpr_1523 chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5] D Palpr_1525 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Palpr_2603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_1065 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_3041 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ppn00410] D Palpr_1301 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Palpr_1302 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:ppn00430] D Palpr_1600 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Palpr_1887 alanine dehydrogenase/PNT domain protein K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Palpr_1204 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Palpr_2066 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Palpr_2063 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Palpr_2064 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:ppn00440] D Palpr_0229 2-aminoethylphosphonate/pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D Palpr_0124 putative hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:ppn00450] D Palpr_1351 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Palpr_1747 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Palpr_1597 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Palpr_1247 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Palpr_0206 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Palpr_2547 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Palpr_2546 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Palpr_1786 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ppn00460] D Palpr_2918 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2117 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2120 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2004 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2005 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2557 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_0341 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1635 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_0243 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1269 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1634 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1600 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Palpr_1845 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Palpr_0858 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Palpr_0486 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ppn00470] D Palpr_0535 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D Palpr_2072 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Palpr_2691 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Palpr_1501 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Palpr_1094 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Palpr_2974 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:ppn00480] D Palpr_1600 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Palpr_1808 glutamate/cysteine ligase,/amino acid ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Palpr_2411 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Palpr_1853 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Palpr_1044 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Palpr_0566 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Palpr_2270 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Palpr_0063 Peroxiredoxin K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:ppn00511] D Palpr_0075 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_0579 glycoside hydrolase family 42 domain 5 loop region K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_1633 glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_1817 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_2137 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Palpr_1197 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Palpr_2283 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D Palpr_1659 Alpha-L-fucosidase K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51] D Palpr_0751 Alpha-L-fucosidase K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51] D Palpr_0237 Glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45] D Palpr_0238 Glucan endo-1,6-beta-glucosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45] C 00540 Lipopolysaccharide biosynthesis [PATH:ppn00540] D Palpr_2427 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Palpr_2426 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D Palpr_2425 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Palpr_1271 metallophosphoesterase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Palpr_3029 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Palpr_2187 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Palpr_1686 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Palpr_1685 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Palpr_3020 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Palpr_2596 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Palpr_0608 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Palpr_0364 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D Palpr_1948 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis [PATH:ppn00542] D Palpr_0830 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ppn00541] D Palpr_1079 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Palpr_0950 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Palpr_0973 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Palpr_0247 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Palpr_1218 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Palpr_0411 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Palpr_1296 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Palpr_0414 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Palpr_1217 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Palpr_0412 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Palpr_1216 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Palpr_0413 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Palpr_1148 TDP-4-keto-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D Palpr_0970 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Palpr_0969 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Palpr_0972 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D Palpr_0967 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10] D Palpr_1078 mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Palpr_0162 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Palpr_1727 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Palpr_0249 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Palpr_0248 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D Palpr_1122 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Palpr_0959 UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Palpr_0958 NAD-dependent epimerase/dehydratase K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367] D Palpr_0957 UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28] D Palpr_0979 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Palpr_0599 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Palpr_0597 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D Palpr_0598 hexapeptide transferase family protein, putative acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D Palpr_1323 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] C 00550 Peptidoglycan biosynthesis [PATH:ppn00550] D Palpr_0924 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Palpr_0004 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Palpr_2629 cytoplasmic peptidoglycan synthetase domain protein K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Palpr_1498 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Palpr_1501 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Palpr_1503 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Palpr_2072 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Palpr_2622 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Palpr_0535 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D Palpr_1443 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Palpr_1243 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Palpr_1160 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Palpr_1502 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Palpr_1499 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Palpr_0160 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Palpr_0605 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Palpr_1238 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Palpr_2060 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Palpr_1504 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Palpr_1665 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:ppn00552] D Palpr_1243 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Palpr_1160 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Palpr_0830 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Palpr_2333 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Palpr_1537 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ppn00543] D Palpr_0415 transferase hexapeptide repeat containing protein K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-] D Palpr_0960 glycosyl transferase group 1 K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D Palpr_0830 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Palpr_2615 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D Palpr_2320 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Palpr_2398 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Palpr_1595 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ppn00730] D Palpr_0135 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Palpr_2217 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Palpr_2489 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Palpr_2344 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ppn00740] D Palpr_0989 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Palpr_1368 diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Palpr_2377 bifunctional deaminase-reductase domain protein K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D Palpr_0812 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Palpr_1475 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Palpr_2756 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] C 00750 Vitamin B6 metabolism [PATH:ppn00750] D Palpr_0098 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Palpr_0565 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D Palpr_1741 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Palpr_2864 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D Palpr_2751 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:ppn00760] D Palpr_2922 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Palpr_2080 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Palpr_0188 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Palpr_2188 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Palpr_1840 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Palpr_3027 5'-nucleotidase; exopolyphosphatase; 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Palpr_0684 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Palpr_1463 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D Palpr_1278 NH(3)-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Palpr_1713 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Palpr_2865 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:ppn00770] D Palpr_0137 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Palpr_0138 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Palpr_0140 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Palpr_0136 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Palpr_0831 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Palpr_1004 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Palpr_1302 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Palpr_1207 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Palpr_0929 Phosphopantothenoylcysteine decarboxylase; Phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Palpr_2495 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Palpr_0851 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Palpr_2873 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Palpr_1230 protein of unknown function DUF479 K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D Palpr_1511 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Palpr_1301 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:ppn00780] D Palpr_2155 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Palpr_0380 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Palpr_1739 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Palpr_2787 serine palmitoyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Palpr_1666 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:ppn00785] D Palpr_0161 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Palpr_0427 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Palpr_0456 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D Palpr_2286 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Palpr_0097 glycine dehydrogenase (decarboxylating) beta subunit; glycine dehydrogenase (decarboxylating) alpha subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Palpr_0614 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Palpr_2857 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ppn00790] D Palpr_2385 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Palpr_2833 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Palpr_2740 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Palpr_0425 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Palpr_1924 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Palpr_0859 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Palpr_0639 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Palpr_0989 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Palpr_0050 aminodeoxychorismate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D Palpr_0051 hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D Palpr_0542 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Palpr_0543 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Palpr_2821 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Palpr_1336 GTP cyclohydrolase I/Nitrile oxidoreductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:ppn00670] D Palpr_0859 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Palpr_1228 5; methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Palpr_0486 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Palpr_2157 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Palpr_2056 IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Palpr_2866 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Palpr_0614 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Palpr_1747 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Palpr_0860 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Palpr_2909 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D Palpr_1668 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Palpr_2069 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ppn00860] D Palpr_1326 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Palpr_2585 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Palpr_2581 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Palpr_2582 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Palpr_2584 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Palpr_2184 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Palpr_2583 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Palpr_2580 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Palpr_2579 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D Palpr_2577 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D Palpr_2578 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D Palpr_2576 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Palpr_2551 siroheme synthase N-terminal domain protein K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Palpr_2575 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Palpr_2936 UbiA prenyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Palpr_2569 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D Palpr_2572 precorrin-3 methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D Palpr_2570 precorrin-4 C11-methyltransferase; cobalt-factor II C20-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Palpr_2571 cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D Palpr_2573 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D Palpr_2566 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D Palpr_2568 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196] D Palpr_2567 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289] D Palpr_2565 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Palpr_2564 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Palpr_2500 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Palpr_2574 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Palpr_0789 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Palpr_0790 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Palpr_0792 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Palpr_0794 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Palpr_0796 cobalamin-5-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Palpr_0795 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Palpr_0797 alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Palpr_0791 aminotransferase class I and II K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] D Palpr_1627 Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ppn00130] D Palpr_0377 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Palpr_1534 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D Palpr_1533 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D Palpr_0479 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D Palpr_1530 Mandelate racemase/muconate lactonizing protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D Palpr_1529 AMP-dependent synthetase and ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D Palpr_1532 1,4-Dihydroxy-2-naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D Palpr_1535 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D Palpr_1531 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Palpr_0766 hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ppn00900] D Palpr_0135 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Palpr_2839 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Palpr_2387 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Palpr_0822 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Palpr_1310 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Palpr_2684 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Palpr_2797 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Palpr_2071 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Palpr_2196 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Palpr_1443 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Palpr_0646 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:ppn00906] D Palpr_0129 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Palpr_0130 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Palpr_0214 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ppn00523] D Palpr_1218 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Palpr_0411 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Palpr_1296 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Palpr_0414 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Palpr_1217 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Palpr_0412 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Palpr_1216 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Palpr_0413 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:ppn01053] D Palpr_1534 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D Palpr_1680 Chorismate mutase, type II K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics D Palpr_1296 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Palpr_0414 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:ppn00946] D Palpr_2918 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2117 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2120 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2004 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2005 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2557 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_0341 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1635 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_0243 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1269 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1634 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:ppn00332] D Palpr_1703 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Palpr_1702 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:ppn00261] D Palpr_2547 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Palpr_2546 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Palpr_0234 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Palpr_2973 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Palpr_0165 aspartate kinase; homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Palpr_2098 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Palpr_1060 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Palpr_1514 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Palpr_0778 hypothetical protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ppn00521] D Palpr_0175 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Palpr_0854 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Palpr_2417 Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Palpr_2870 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Palpr_1218 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Palpr_0411 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Palpr_1296 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Palpr_0414 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Palpr_1217 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Palpr_0412 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Palpr_1216 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Palpr_0413 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Palpr_0175 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:ppn00525] D Palpr_1218 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Palpr_0411 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Palpr_1296 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Palpr_0414 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:ppn00401] D Palpr_2603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_1065 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_3041 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Palpr_2891 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Palpr_2892 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Palpr_0687 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Palpr_0380 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Palpr_1739 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Palpr_2156 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:ppn00999] D Palpr_1236 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Palpr_2918 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2117 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2120 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2004 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2005 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_2557 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_0341 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1635 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_0243 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1269 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Palpr_1634 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ppn00362] D Palpr_1681 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Palpr_1268 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Palpr_0390 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Palpr_0391 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Palpr_2065 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation D Palpr_1362 Fe-only nitrogenase, delta subunit K00531 anfG; nitrogenase delta subunit [EC:1.18.6.1] D Palpr_1361 Fe-only nitrogenase FeFe protein subunit AnfK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Palpr_1427 Mo-nitrogenase MoFe protein subunit NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Palpr_1366 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Palpr_1423 Mo-nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH D Palpr_1363 Fe-only nitrogenase FeFe protein subunit AnfD precursor K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Palpr_1426 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D Palpr_1681 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00633 Nitrotoluene degradation [PATH:ppn00633] D Palpr_2652 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation D Palpr_2608 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Palpr_2282 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] C 00363 Bisphenol degradation C 00621 Dioxin degradation D Palpr_1681 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ppn03020] D Palpr_1725 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Palpr_1726 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Palpr_2484 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ppn03010] D Palpr_0260 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Palpr_1328 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Palpr_2463 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Palpr_2483 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Palpr_2474 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Palpr_0327 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D Palpr_2454 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Palpr_2471 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Palpr_1329 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Palpr_2456 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Palpr_2482 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Palpr_2453 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Palpr_2481 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Palpr_2470 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Palpr_2595 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Palpr_1294 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Palpr_2466 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Palpr_0326 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Palpr_2461 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Palpr_2200 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Palpr_1715 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Palpr_1722 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Palpr_2460 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Palpr_2457 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Palpr_2458 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Palpr_2469 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Palpr_2472 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Palpr_1724 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Palpr_0325 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Palpr_1723 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Palpr_1721 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Palpr_1330 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Palpr_2467 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Palpr_2476 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Palpr_2464 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Palpr_2485 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Palpr_2473 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Palpr_1872 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Palpr_1226 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Palpr_1282 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Palpr_2462 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Palpr_2459 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Palpr_2468 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Palpr_1222 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Palpr_1281 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Palpr_1175 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Palpr_2465 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Palpr_2475 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Palpr_2905 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Palpr_0289 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D Palpr_1174 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Palpr_2075 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D Palpr_1225 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Palpr_2480 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Palpr_R0005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Palpr_R0051 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Palpr_R0029 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Palpr_R0048 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Palpr_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Palpr_R0026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Palpr_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Palpr_R0047 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Palpr_R0025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ppn00970] D Palpr_R0007 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Palpr_R0027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Palpr_R0049 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Palpr_R0030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Palpr_R0052 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Palpr_R0058 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Palpr_R0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Palpr_R0063 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Palpr_R0002 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Palpr_R0003 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Palpr_R0062 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Palpr_R0036 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Palpr_R0045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Palpr_R0046 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Palpr_R0054 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Palpr_R0023 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Palpr_R0055 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Palpr_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Palpr_R0019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Palpr_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Palpr_R0064 tRNA-His K14226 tRNA-His; tRNA His D Palpr_R0006 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Palpr_R0028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Palpr_R0050 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Palpr_R0057 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Palpr_R0056 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Palpr_R0022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Palpr_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Palpr_R0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Palpr_R0037 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Palpr_R0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Palpr_R0024 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Palpr_R0061 tRNA-Met K14230 tRNA-Met; tRNA Met D Palpr_R0053 tRNA-Met K14230 tRNA-Met; tRNA Met D Palpr_R0004 tRNA-Met K14230 tRNA-Met; tRNA Met D Palpr_R0059 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Palpr_R0015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Palpr_R0065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Palpr_R0034 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Palpr_R0011 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Palpr_R0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Palpr_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Palpr_R0039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Palpr_R0043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Palpr_R0017 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Palpr_R0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Palpr_R0013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Palpr_R0044 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Palpr_R0020 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Palpr_R0041 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Palpr_R0031 tRNA-Val K14237 tRNA-Val; tRNA Val D Palpr_R0032 tRNA-Val K14237 tRNA-Val; tRNA Val D Palpr_1326 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Palpr_2428 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Palpr_2688 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Palpr_0688 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Palpr_1926 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Palpr_1775 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Palpr_0267 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Palpr_1280 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Palpr_2275 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Palpr_1786 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Palpr_2866 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Palpr_2868 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Palpr_1315 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Palpr_1675 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Palpr_3047 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Palpr_2492 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Palpr_0709 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Palpr_2597 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Palpr_1482 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Palpr_1212 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Palpr_1838 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Palpr_2106 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ppn03060] D Palpr_2477 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Palpr_1719 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Palpr_1179 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Palpr_1992 protein translocase subunit secF;protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein D Palpr_0595 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Palpr_2886 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Palpr_0379 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Palpr_0882 protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB D Palpr_1229 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Palpr_R0016 RNA component of signal recognition particle K01983 ffs; SRP RNA D Palpr_1172 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Palpr_1390 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Palpr_1391 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D Palpr_1513 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Palpr_1564 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Palpr_1673 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ppn04122] D Palpr_1374 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Palpr_1590 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Palpr_1594 Mov34/MPN/PAD-1 family protein K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6] C 03050 Proteasome C 03018 RNA degradation [PATH:ppn03018] D Palpr_1047 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Palpr_1663 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Palpr_0099 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Palpr_0321 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Palpr_0047 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Palpr_2437 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Palpr_0154 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Palpr_0304 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Palpr_2824 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Palpr_1860 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Palpr_0383 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Palpr_2680 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Palpr_2798 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Palpr_2739 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Palpr_1195 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Palpr_1752 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Palpr_0110 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:ppn03030] D Palpr_0916 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_1794 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_3000 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_1790 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Palpr_0142 DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Palpr_2409 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Palpr_0729 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Palpr_1795 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Palpr_0823 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Palpr_2235 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Palpr_2919 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Palpr_1949 ribonuclease H-related protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Palpr_2241 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Palpr_2197 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Palpr_1062 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ppn03410] D Palpr_0103 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Palpr_0203 endonuclease III; DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Palpr_1352 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Palpr_0255 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Palpr_1331 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Palpr_1914 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Palpr_1875 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Palpr_2197 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Palpr_2352 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Palpr_1062 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ppn03420] D Palpr_0814 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Palpr_1893 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Palpr_1348 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Palpr_0891 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Palpr_2090 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Palpr_0197 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Palpr_2197 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Palpr_1062 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ppn03430] D Palpr_1742 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Palpr_1006 DNA mismatch repair protein MutS domain protein K03555 mutS; DNA mismatch repair protein MutS D Palpr_1049 Smr protein/MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D Palpr_1728 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Palpr_0197 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Palpr_2832 Exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Palpr_2348 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Palpr_2352 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Palpr_2919 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Palpr_1790 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Palpr_1795 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Palpr_0142 DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Palpr_0729 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Palpr_2409 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Palpr_0916 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_1794 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_3000 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_1062 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:ppn03440] D Palpr_2352 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Palpr_2919 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Palpr_0611 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Palpr_2201 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Palpr_1074 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D Palpr_0196 RecA protein K03553 recA; recombination protein RecA D Palpr_2197 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Palpr_0998 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Palpr_1937 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Palpr_1249 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Palpr_2389 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Palpr_1790 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Palpr_1795 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Palpr_0142 DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Palpr_0729 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Palpr_2409 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Palpr_0916 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_1794 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_3000 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_1892 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ppn02010] D Palpr_1419 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Palpr_1420 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Palpr_1421 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Palpr_0746 ABC transporter related protein K05776 modF; molybdate transport system ATP-binding protein D Palpr_3054 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Palpr_1873 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Palpr_1874 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Palpr_2251 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Palpr_1616 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Palpr_1762 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Palpr_0044 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Palpr_1764 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Palpr_0045 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Palpr_1765 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Palpr_0046 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Palpr_1766 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Palpr_2128 ABC-type branched-chain amino acid transport systems periplasmic component-like protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Palpr_2561 Cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein D Palpr_2560 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Palpr_2562 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Palpr_2563 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Palpr_1157 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D Palpr_1145 ABC transporter related protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Palpr_2278 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Palpr_1063 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Palpr_1980 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Palpr_0988 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D Palpr_1297 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Palpr_0299 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Palpr_2645 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Palpr_1245 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Palpr_0856 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein D Palpr_2191 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:ppn03070] D Palpr_2698 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0091 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0389 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0172 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0262 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_2728 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_1992 protein translocase subunit secF;protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein D Palpr_1719 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Palpr_1179 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Palpr_2477 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Palpr_0595 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Palpr_2886 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Palpr_0379 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Palpr_1172 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Palpr_0882 protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB D Palpr_1229 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Palpr_1390 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Palpr_1391 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:ppn02020] D Palpr_1731 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Palpr_1769 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Palpr_2759 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Palpr_1616 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Palpr_1762 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Palpr_1019 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Palpr_1017 acriflavin resistance protein K07787 cusA; copper/silver efflux system protein D Palpr_2667 osmosensitive K channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Palpr_1547 integral membrane sensor signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Palpr_2668 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Palpr_1546 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Palpr_2664 potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D Palpr_2665 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D Palpr_2666 potassium-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit D Palpr_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Palpr_0291 integral membrane sensor signal transduction histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3] D Palpr_2173 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Palpr_2914 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU D Palpr_1098 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Palpr_1102 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Palpr_1104 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Palpr_1355 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein D Palpr_1439 DNA-binding protein Fis K02584 nifA; Nif-specific regulatory protein D Palpr_2230 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Palpr_2169 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Palpr_1857 cytochrome bd quinol oxidase subunit 1 apoprotein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Palpr_1856 cytochrome bd quinol oxidase subunit 2 apoprotein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Palpr_2698 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0091 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0389 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0172 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0262 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_2728 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_2315 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Palpr_0251 polysaccharide export protein, BexD/CtrA/VexA family protein K01991 wza; polysaccharide biosynthesis/export protein D Palpr_0398 Soluble ligand binding domain K01991 wza; polysaccharide biosynthesis/export protein D Palpr_0252 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Palpr_2799 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D Palpr_0399 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Palpr_0250 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Palpr_2316 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Palpr_1122 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Palpr_1811 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_1774 non-processive endocellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_0244 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_0669 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_0671 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_1662 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_0628 glycoside hydrolase family 9 domain protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_2972 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Palpr_2527 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D Palpr_2162 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D Palpr_2516 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D Palpr_2510 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D Palpr_2528 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor D Palpr_2511 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor D Palpr_2517 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ppn02024] D Palpr_2891 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Palpr_2892 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Palpr_1289 rhamnosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D Palpr_2668 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Palpr_1546 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Palpr_2128 ABC-type branched-chain amino acid transport systems periplasmic component-like protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Palpr_0430 PKD domain containing protein K20276 bapA; large repetitive protein D Palpr_0827 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_1211 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2153 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2403 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2908 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_1368 diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Palpr_2732 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Palpr_2886 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Palpr_1992 protein translocase subunit secF;protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein D Palpr_1719 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Palpr_1179 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Palpr_2477 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Palpr_0595 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Palpr_0379 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Palpr_1172 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Palpr_0882 protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB D Palpr_1229 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Palpr_2914 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:ppn02030] D Palpr_2251 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Palpr_2169 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Palpr_2847 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:ppn02040] D Palpr_2847 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Palpr_1045 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Palpr_2230 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Palpr_1047 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:ppn04980] D Palpr_2500 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Palpr_0286 methylmalonyl-CoA mutase metallochaperone MeaB K07588 MMAA; GTPase [EC:3.6.5.-] D Palpr_1030 heterodimeric methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Palpr_1031 heterodimeric methylmalonyl-CoA mutase large subunit precursor K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Palpr_1747 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ppn01501] D Palpr_2701 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Palpr_2198 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Palpr_0350 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Palpr_2828 TonB family protein K02172 blaR1; bla regulator protein blaR1 D Palpr_2827 TonB family protein K02172 blaR1; bla regulator protein blaR1 D Palpr_0351 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Palpr_2829 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Palpr_2199 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Palpr_1233 regulatory protein TetR K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D Palpr_2730 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Palpr_0387 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Palpr_0388 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Palpr_2732 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Palpr_2698 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0091 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0389 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0172 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0262 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_2728 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0605 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Palpr_1238 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Palpr_2060 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Palpr_1504 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Palpr_0755 Beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:ppn01502] D Palpr_2072 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Palpr_0535 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D Palpr_2622 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Palpr_1502 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Palpr_1499 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ppn01503] D Palpr_3053 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Palpr_2730 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Palpr_0387 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Palpr_0388 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Palpr_2698 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0091 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0389 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0172 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0262 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_2728 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_2427 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ppn01000] C 01001 Protein kinases [BR:ppn01001] D Palpr_2074 PASTA domain containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Palpr_0900 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Palpr_0399 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Palpr_0250 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Palpr_2316 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Palpr_1731 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Palpr_1769 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Palpr_2759 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Palpr_2667 osmosensitive K channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Palpr_1547 integral membrane sensor signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Palpr_0291 integral membrane sensor signal transduction histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3] D Palpr_1964 integral membrane sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Palpr_1965 integral membrane sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ppn01009] D Palpr_2392 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Palpr_2798 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Palpr_1679 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Palpr_1201 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:ppn01002] D Palpr_1673 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D Palpr_2216 Bleomycin hydrolase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D Palpr_1552 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Palpr_1398 NLP/P60 protein K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13] D Palpr_0345 NLP/P60 protein K13695 nlpC; probable lipoprotein NlpC D Palpr_0799 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Palpr_1105 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Palpr_0800 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Palpr_1107 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Palpr_2862 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D Palpr_0727 ThiJ/PfpI domain-containing protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D Palpr_0649 Abortive infection protein K07052 K07052; CAAX protease family protein D Palpr_1700 Abortive infection protein K07052 K07052; CAAX protease family protein D Palpr_0718 Abortive infection protein K07052 K07052; CAAX protease family protein D Palpr_2755 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D Palpr_0848 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D Palpr_2151 M6 family metalloprotease domain protein K09607 ina; immune inhibitor A [EC:3.4.24.-] D Palpr_2087 endothelin-converting enzyme K07386 pepO; putative endopeptidase [EC:3.4.24.-] D Palpr_2147 Neprilysin K07386 pepO; putative endopeptidase [EC:3.4.24.-] D Palpr_2401 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Palpr_2515 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Palpr_2523 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Palpr_0832 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Palpr_0615 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Palpr_2411 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Palpr_1853 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Palpr_2478 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Palpr_0726 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Palpr_1337 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Palpr_0477 isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] D Palpr_2846 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Palpr_0646 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D Palpr_0845 Dipeptidyl-peptidase III K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4] D Palpr_2841 peptidase M50 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Palpr_2198 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Palpr_0350 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Palpr_2828 TonB family protein K02172 blaR1; bla regulator protein blaR1 D Palpr_2827 TonB family protein K02172 blaR1; bla regulator protein blaR1 D Palpr_2831 peptidase S8 and S53 subtilisin kexin sedolisin K17734 aprX; serine protease AprX [EC:3.4.21.-] D Palpr_0109 Prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D Palpr_0177 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D Palpr_1665 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Palpr_1868 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Palpr_1470 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Palpr_2948 SOS response UmuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D Palpr_1513 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Palpr_1564 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Palpr_2394 C-terminal processing peptidase-3 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Palpr_2496 C-terminal processing peptidase-3 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Palpr_3009 C-terminal processing peptidase-3 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Palpr_2149 signal peptide peptidase A K04773 sppA; protease IV [EC:3.4.21.-] D Palpr_0474 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6] D Palpr_2860 Rhomboid family protein K07059 K07059; rhomboid family protein D Palpr_2859 Rhomboid family protein K07059 K07059; rhomboid family protein D Palpr_2203 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Palpr_1600 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Palpr_2084 collagenase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Palpr_0194 peptidase U32 K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase C 01003 Glycosyltransferases [BR:ppn01003] D Palpr_0934 glycosyl transferase family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D Palpr_1537 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Palpr_1132 hypothetical protein K20151 fucT; alpha(1,3/1,4) fucosyltransferase [EC:2.4.1.65 2.4.1.152] D Palpr_1136 hypothetical protein K20151 fucT; alpha(1,3/1,4) fucosyltransferase [EC:2.4.1.65 2.4.1.152] D Palpr_1303 glycogen synthase (UDP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21] D Palpr_0160 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Palpr_0605 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Palpr_1238 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Palpr_0960 glycosyl transferase group 1 K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D Palpr_2333 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Palpr_0830 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Palpr_2615 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ppn01005] D Palpr_2427 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Palpr_3029 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Palpr_2426 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D Palpr_2425 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Palpr_1271 metallophosphoesterase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Palpr_2187 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Palpr_0608 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Palpr_2596 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Palpr_1685 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Palpr_3020 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Palpr_1686 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Palpr_1948 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D Palpr_0364 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D Palpr_1289 rhamnosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D Palpr_0625 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D Palpr_0830 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppn01011] D Palpr_0924 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Palpr_0004 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Palpr_2629 cytoplasmic peptidoglycan synthetase domain protein K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Palpr_1498 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Palpr_1501 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Palpr_1503 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Palpr_0535 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D Palpr_2072 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Palpr_2691 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Palpr_2203 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Palpr_1502 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Palpr_1499 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Palpr_1243 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Palpr_1160 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Palpr_0605 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Palpr_1238 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Palpr_2060 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Palpr_1504 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Palpr_1665 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Palpr_0160 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Palpr_1449 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D Palpr_1200 Lytic transglycosylase catalytic K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D Palpr_0005 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Palpr_1260 Rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Palpr_3053 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ppn01004] D Palpr_0687 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Palpr_1842 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Palpr_1150 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Palpr_0288 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Palpr_2155 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Palpr_0380 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Palpr_2426 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D Palpr_1739 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Palpr_2011 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Palpr_0827 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_1211 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2153 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2403 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2908 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_0028 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Palpr_0067 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Palpr_0676 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:ppn01006] D Palpr_2071 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Palpr_2196 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Palpr_1443 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Palpr_0129 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Palpr_0003 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Palpr_1531 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Palpr_2936 UbiA prenyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:ppn01007] D Palpr_1326 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Palpr_2428 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Palpr_1838 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Palpr_2106 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Palpr_2275 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Palpr_2492 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Palpr_1786 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Palpr_1675 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Palpr_2868 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Palpr_1315 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Palpr_3047 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Palpr_0688 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Palpr_1926 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Palpr_2597 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Palpr_1775 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Palpr_1280 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Palpr_0709 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Palpr_0267 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Palpr_2688 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Palpr_1482 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Palpr_1212 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Palpr_2603 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_1065 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Palpr_1095 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Palpr_1524 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Palpr_0801 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Palpr_3041 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Palpr_0301 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Palpr_2787 serine palmitoyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Palpr_1351 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Palpr_0480 aminotransferase class-III K03918 lat; L-lysine 6-transaminase [EC:2.6.1.36] D Palpr_2180 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Palpr_2581 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Palpr_1511 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Palpr_0229 2-aminoethylphosphonate/pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D Palpr_1741 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Palpr_0597 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D Palpr_1148 TDP-4-keto-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ppn00194] D Palpr_2440 ATPase, F1 complex, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Palpr_2439 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Palpr_2447 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Palpr_2446 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Palpr_2445 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Palpr_2444 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Palpr_2443 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Palpr_2442 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ppn03000] D Palpr_0322 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D Palpr_2631 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator D Palpr_1527 methylated-DNA/protein-cysteinemethyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D Palpr_0603 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Palpr_0767 transcriptional regulator, LysR family K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D Palpr_0027 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D Palpr_2279 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Palpr_0108 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Palpr_0562 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Palpr_3015 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D Palpr_1233 regulatory protein TetR K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D Palpr_2719 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Palpr_2105 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D Palpr_2490 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D Palpr_0386 regulatory protein MarR K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D Palpr_0062 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Palpr_2970 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Palpr_2613 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D Palpr_3023 transcriptional regulator, Crp/Fnr family K21556 malR; CRP/FNR family transcriptional regulator, polysaccharide utilization system transcription regulator D Palpr_0786 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Palpr_2627 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Palpr_0092 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator D Palpr_0351 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Palpr_2829 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Palpr_2199 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Palpr_1666 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Palpr_1355 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein D Palpr_1439 DNA-binding protein Fis K02584 nifA; Nif-specific regulatory protein D Palpr_1416 TOBE domain-containing protein K02019 modE; molybdate transport system regulatory protein D Palpr_1417 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein D Palpr_1314 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Palpr_2852 transcriptional regulator K07727 K07727; putative transcriptional regulator D Palpr_1000 delta-1-pyrroline-5-carboxylate dehydrogenase; L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Palpr_1451 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Palpr_0397 NusG antitermination factor K05785 rfaH; transcriptional antiterminator RfaH D Palpr_1895 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism D Palpr_0892 phage shock protein C, PspC K03973 pspC; phage shock protein C D Palpr_1674 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor D Palpr_1507 MraZ domain K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:ppn03021] D Palpr_2484 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Palpr_1725 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Palpr_1726 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Palpr_1045 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Palpr_2114 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Palpr_1409 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Palpr_2527 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D Palpr_2162 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D Palpr_2516 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D Palpr_2510 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D Palpr_2230 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Palpr_2898 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Palpr_0594 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Palpr_1720 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Palpr_1674 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor D Palpr_2978 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Palpr_0383 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:ppn03019] D Palpr_0258 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Palpr_2154 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Palpr_2680 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Palpr_2437 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Palpr_0099 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Palpr_0321 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Palpr_0047 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Palpr_0154 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Palpr_0304 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Palpr_2824 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Palpr_1860 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Palpr_1047 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Palpr_1663 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Palpr_0383 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Palpr_2798 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Palpr_2739 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Palpr_1195 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Palpr_1752 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Palpr_0110 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:ppn03011] D Palpr_0260 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Palpr_1328 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Palpr_2463 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Palpr_2483 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Palpr_2474 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Palpr_0327 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D Palpr_2454 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Palpr_2471 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Palpr_1329 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Palpr_2456 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Palpr_2482 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Palpr_2453 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Palpr_2481 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Palpr_2470 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Palpr_2595 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Palpr_1294 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Palpr_2466 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Palpr_0326 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Palpr_2461 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Palpr_2200 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Palpr_1715 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Palpr_1722 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Palpr_2460 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Palpr_2457 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Palpr_2458 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Palpr_2469 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Palpr_2472 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Palpr_0325 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Palpr_1723 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Palpr_1721 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Palpr_1724 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Palpr_1330 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Palpr_2467 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Palpr_2476 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Palpr_2464 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Palpr_2485 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Palpr_2473 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Palpr_1872 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Palpr_1226 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Palpr_1282 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Palpr_2462 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Palpr_2459 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Palpr_2468 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Palpr_1281 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Palpr_1175 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Palpr_2465 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Palpr_2475 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Palpr_2905 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Palpr_0289 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D Palpr_1174 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Palpr_2075 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D Palpr_1225 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Palpr_2480 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Palpr_1222 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Palpr_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Palpr_R0047 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Palpr_R0025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Palpr_R0005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Palpr_R0051 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Palpr_R0029 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Palpr_R0048 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Palpr_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Palpr_R0026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ppn03009] D Palpr_2154 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Palpr_0292 GTP-binding protein Era K03595 era; GTPase D Palpr_2345 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Palpr_1674 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor D Palpr_2898 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Palpr_0594 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Palpr_1720 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Palpr_1846 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Palpr_1478 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Palpr_1227 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Palpr_0686 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Palpr_1506 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Palpr_2355 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Palpr_0828 putative S-adenosylmethionine-dependent methytransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Palpr_0699 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Palpr_2724 23S rRNA m(6)A-1618 methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D Palpr_0186 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Palpr_2744 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Palpr_2399 rRNA (guanine-N(2)-)-methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D Palpr_0635 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Palpr_1491 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Palpr_2925 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Palpr_0273 RNA-binding S4 domain protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Palpr_2073 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Palpr_0174 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Palpr_0698 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Palpr_1835 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D Palpr_0298 GCN5-related N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D Palpr_1510 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Palpr_1171 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Palpr_0517 (LSU ribosomal protein L11P)-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Palpr_0258 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Palpr_0641 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Palpr_0154 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Palpr_0304 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Palpr_2489 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Palpr_1305 ribosome-associated GTPase EngA K03977 engA; GTPase D Palpr_2794 GTP-binding protein HflX K03665 hflX; GTPase D Palpr_2351 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Palpr_1476 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Palpr_1885 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Palpr_2277 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Palpr_2899 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Palpr_2845 iojap-like protein K09710 ybeB; ribosome-associated protein D Palpr_1717 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D Palpr_2158 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Palpr_0290 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ppn03016] D Palpr_0297 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Palpr_1326 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Palpr_0709 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Palpr_1675 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Palpr_1315 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Palpr_1786 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Palpr_2428 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Palpr_2492 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Palpr_3047 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Palpr_0688 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Palpr_2688 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Palpr_1926 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Palpr_1775 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Palpr_0267 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Palpr_1280 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Palpr_2275 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Palpr_2868 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Palpr_2597 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Palpr_1482 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Palpr_1212 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Palpr_1838 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Palpr_2106 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Palpr_1934 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Palpr_2977 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Palpr_2406 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Palpr_0502 Uncharacterized protein family UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Palpr_2907 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Palpr_1242 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Palpr_2508 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14] D Palpr_2351 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Palpr_0003 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Palpr_0423 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Palpr_2091 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Palpr_2185 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Palpr_R0018 RNA component of RNaseP K01978 rnpB; M1 RNA D Palpr_0128 ABC transporter related protein K06020 ettA; energy-dependent translational throttle protein EttA D Palpr_0588 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Palpr_2026 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Palpr_2086 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Palpr_2979 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Palpr_1158 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Palpr_1985 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Palpr_1792 Methyltransferase type 11 K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D Palpr_2243 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family D Palpr_1374 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Palpr_0941 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Palpr_1550 S-adenosylmethionine/tRNA-ribosyltransferase isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Palpr_1241 S-adenosylmethionine/tRNA-ribosyltransferase isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Palpr_2821 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Palpr_0542 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Palpr_0543 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Palpr_1336 GTP cyclohydrolase I/Nitrile oxidoreductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Palpr_2854 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Palpr_1298 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Palpr_0638 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Palpr_0373 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Palpr_2902 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Palpr_2089 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Palpr_1258 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Palpr_2437 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Palpr_1663 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:ppn03012] D Palpr_2360 translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1 D Palpr_2897 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D Palpr_1224 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D Palpr_0829 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Palpr_0944 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Palpr_1327 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Palpr_1718 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Palpr_2455 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Palpr_1773 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Palpr_0776 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1 D Palpr_2488 ribosome recycling factor K02838 frr; ribosome recycling factor D Palpr_1369 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Palpr_1221 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Palpr_2479 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D Palpr_1898 translation elongation factor P (EF-P) K02356 efp; elongation factor P D Palpr_2228 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2 D Palpr_0514 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:ppn03110] D Palpr_0101 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Palpr_0852 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Palpr_1867 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Palpr_1679 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Palpr_2739 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Palpr_1195 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Palpr_0994 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Palpr_2274 heat shock protein DnaJ domain protein K05801 djlA; DnaJ like chaperone protein D Palpr_0995 GrpE protein K03687 GRPE; molecular chaperone GrpE D Palpr_2150 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Palpr_1220 heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D Palpr_1194 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Palpr_2846 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Palpr_2442 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Palpr_0882 protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB D Palpr_1520 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D Palpr_1197 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Palpr_0780 peptidyl-prolyl cis-trans isomerase cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Palpr_1492 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D Palpr_0164 peptidylprolyl isomerase FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D Palpr_2102 Peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D Palpr_2101 Peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D Palpr_3051 peptidylprolyl isomerase FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Palpr_1883 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D Palpr_1778 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D Palpr_1791 thioredoxin K03671 TXN; thioredoxin D Palpr_0022 thioredoxin K03671 TXN; thioredoxin D Palpr_0254 Thioredoxin domain-containing protein K03671 TXN; thioredoxin D Palpr_1519 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] C 04131 Membrane trafficking [BR:ppn04131] D Palpr_2390 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Palpr_1378 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Palpr_2245 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Palpr_1679 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:ppn03051] D Palpr_1679 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:ppn03032] D Palpr_1949 ribonuclease H-related protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Palpr_2861 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta D Palpr_0257 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Palpr_1170 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Palpr_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Palpr_0823 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Palpr_2235 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Palpr_2919 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Palpr_1790 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Palpr_1795 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Palpr_0729 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Palpr_2409 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Palpr_0916 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_1794 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_3000 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_0142 DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Palpr_2241 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Palpr_2197 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Palpr_1062 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Palpr_0821 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Palpr_1682 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Palpr_1776 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Palpr_2025 DNA topoisomerase type IIA subunit B region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Palpr_2434 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Palpr_1276 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ppn03036] D Palpr_2154 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Palpr_2861 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta D Palpr_0257 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Palpr_1170 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Palpr_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Palpr_1496 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Palpr_0143 Septum formation initiator K13052 divIC; cell division protein DivIC D Palpr_0856 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein D Palpr_1504 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Palpr_0204 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Palpr_1497 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D Palpr_1500 cell cycle protein K03588 ftsW; cell division protein FtsW D Palpr_1245 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Palpr_1495 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Palpr_3053 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Palpr_2730 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Palpr_0387 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Palpr_2057 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Palpr_2058 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Palpr_2061 cell cycle protein K05837 rodA; rod shape determining protein RodA D Palpr_1452 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Palpr_1451 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Palpr_1776 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Palpr_2025 DNA topoisomerase type IIA subunit B region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Palpr_2091 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Palpr_0686 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Palpr_1716 integrase family protein K03733 xerC; integrase/recombinase XerC D Palpr_2015 tyrosine recombinase XerD subunit K04763 xerD; integrase/recombinase XerD D Palpr_2405 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Palpr_1072 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:ppn03400] D Palpr_1352 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Palpr_1331 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Palpr_0255 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Palpr_0103 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Palpr_0203 endonuclease III; DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Palpr_0245 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Palpr_2782 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Palpr_0697 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Palpr_2021 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Palpr_1527 methylated-DNA/protein-cysteinemethyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D Palpr_1914 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Palpr_1875 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Palpr_2352 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Palpr_1062 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Palpr_2197 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Palpr_1893 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Palpr_1348 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Palpr_0891 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Palpr_2090 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Palpr_0197 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Palpr_1725 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Palpr_1726 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Palpr_2484 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Palpr_0814 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Palpr_1742 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Palpr_1006 DNA mismatch repair protein MutS domain protein K03555 mutS; DNA mismatch repair protein MutS D Palpr_1049 Smr protein/MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D Palpr_1728 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Palpr_2832 Exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Palpr_2348 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Palpr_1790 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Palpr_1795 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Palpr_0729 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Palpr_2409 putative DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Palpr_0916 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_1794 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_3000 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Palpr_0142 DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Palpr_2919 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Palpr_0196 RecA protein K03553 recA; recombination protein RecA D Palpr_0998 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Palpr_1937 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Palpr_1249 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Palpr_1892 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Palpr_1254 DNA replication and repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Palpr_0611 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Palpr_2389 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Palpr_2201 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Palpr_1074 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D Palpr_0927 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Palpr_0821 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Palpr_1682 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Palpr_2434 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Palpr_2861 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta D Palpr_0257 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Palpr_1170 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Palpr_2824 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Palpr_1860 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Palpr_3039 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Palpr_2947 DNA-directed DNA polymerase K03502 umuC; DNA polymerase V D Palpr_2948 SOS response UmuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D Palpr_1372 regulatory protein RecX K03565 recX; regulatory protein D Palpr_0610 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Palpr_2749 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:ppn03029] D Palpr_2897 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D Palpr_1224 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D Palpr_1327 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Palpr_1718 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Palpr_2455 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Palpr_1773 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Palpr_0292 GTP-binding protein Era K03595 era; GTPase D Palpr_1838 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Palpr_1315 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Palpr_0688 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Palpr_1775 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Palpr_2492 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Palpr_2919 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Palpr_1444 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D Palpr_2739 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Palpr_0995 GrpE protein K03687 GRPE; molecular chaperone GrpE D Palpr_1195 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Palpr_1194 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Palpr_0994 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Palpr_2405 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Palpr_2936 UbiA prenyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Palpr_2886 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Palpr_2931 uncharacterized protein SCO1/SenC/PrrC K07152 SCO1; protein SCO1 D Palpr_1679 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ppn02000] D Palpr_2191 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Palpr_0331 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Palpr_1118 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Palpr_0330 ABC transporter transmembrane region K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Palpr_2590 ABC transporter related protein K15738 uup; ABC transport system ATP-binding/permease protein D Palpr_1419 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Palpr_1420 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Palpr_1421 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Palpr_0746 ABC transporter related protein K05776 modF; molybdate transport system ATP-binding protein D Palpr_2251 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Palpr_2789 Conserved hypothetical protein CHP00245 K02069 STAR2; UDP-glucose/iron transport system permease protein D Palpr_2790 ABC transporter related protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D Palpr_3054 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Palpr_1873 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Palpr_1874 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Palpr_1616 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Palpr_1762 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Palpr_0044 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Palpr_1764 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Palpr_0045 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Palpr_1765 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Palpr_0046 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Palpr_1766 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Palpr_2128 ABC-type branched-chain amino acid transport systems periplasmic component-like protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Palpr_0493 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Palpr_0498 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Palpr_0503 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Palpr_0504 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Palpr_0793 iron(III) ABC transporter periplasmic iron-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Palpr_1070 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Palpr_1068 transport system permease protein K25027 btuC; cobalamin transport system permease protein D Palpr_1067 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Palpr_2561 Cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein D Palpr_2562 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Palpr_2560 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Palpr_2563 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Palpr_1157 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D Palpr_1145 ABC transporter related protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Palpr_0988 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D Palpr_1297 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Palpr_0299 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Palpr_2645 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Palpr_3026 protein involved in gliding motility GldF K25151 gldF; gliding motility-associated transport system permease protein D Palpr_1936 protein involved in gliding motility GldA K25152 gldA; gliding motility-associated transport system ATP-binding protein D Palpr_1453 gliding-associated putative ABC transporter substrate-binding component GldG K25153 gldG; gliding motility-associatede transport system auxiliary component D Palpr_2712 ABC-2 type transporter K25180 ybhR; drug efflux transport system permease protein D Palpr_2713 ABC-2 type transporter K25181 ybhS; drug efflux transport system permease protein D Palpr_2716 ABC transporter related protein K25182 ybhF; drug efflux transport system ATP-binding protein D Palpr_2715 ABC transporter related protein K25182 ybhF; drug efflux transport system ATP-binding protein D Palpr_2717 putative ABC transport system, lipoprotein K25183 ybhG; membrane fusion protein YbhG D Palpr_2278 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Palpr_1063 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Palpr_1980 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Palpr_1245 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Palpr_0856 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein D Palpr_0021 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Palpr_0886 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Palpr_0887 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Palpr_0650 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Palpr_0651 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Palpr_1052 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Palpr_1784 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Palpr_2989 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Palpr_0020 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Palpr_0087 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Palpr_0088 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Palpr_2695 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Palpr_0169 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Palpr_0170 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Palpr_0085 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Palpr_2696 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Palpr_0168 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Palpr_1832 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D Palpr_1256 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Palpr_0148 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Palpr_0694 sugar transporter K08138 xylE; MFS transporter, SP family, xylose:H+ symportor D Palpr_0106 L-fucose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D Palpr_2284 L-fucose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D Palpr_0176 major facilitator superfamily MFS_1 K02429 fucP; MFS transporter, FHS family, L-fucose permease D Palpr_0824 xanthosine permease K11537 xapB; MFS transporter, NHS family, xanthosine permease D Palpr_0556 major facilitator superfamily MFS_1 K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D Palpr_2701 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Palpr_0263 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Palpr_0537 TrkA-N domain protein K10716 kch; voltage-gated potassium channel D Palpr_1240 Ion transport 2 domain protein K10716 kch; voltage-gated potassium channel D Palpr_1103 ammonium transporter K03320 amt; ammonium transporter, Amt family D Palpr_0328 ammonium transporter K03320 amt; ammonium transporter, Amt family D Palpr_1099 ammonium transporter K03320 amt; ammonium transporter, Amt family D Palpr_2288 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog D Palpr_1164 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog D Palpr_1165 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog D Palpr_1918 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D Palpr_1279 MscS Mechanosensitive ion channel K16052 ynaI; MscS family membrane protein D Palpr_0809 MgtE intracellular region K06213 mgtE; magnesium transporter D Palpr_2847 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Palpr_1188 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D Palpr_0434 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Palpr_0433 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Palpr_2269 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D Palpr_0811 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D Palpr_0209 camphor resistance protein CrcB K06199 crcB; fluoride exporter D Palpr_1016 hypothetical protein K08364 merP; periplasmic mercuric ion binding protein D Palpr_1837 protein of unknown function DUF1211 K24915 TMEM175; TMEM175 potassium channel family protein D Palpr_1859 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Palpr_2875 gliding motility-associated protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family D Palpr_1493 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Palpr_0105 hypothetical protein K02024 lamB; maltoporin D Palpr_0309 Carbohydrate-selective porin OprB K16080 mnoP; high affinity Mn2+ porin D Palpr_2637 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Palpr_1413 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Palpr_2404 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Palpr_1772 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Palpr_1878 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D Palpr_3014 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC D Palpr_0242 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC D Palpr_2001 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC D Palpr_2009 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC D Palpr_0470 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC D Palpr_1826 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC D Palpr_0494 TonB-dependent receptor plug K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D Palpr_0499 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D Palpr_1306 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Palpr_1014 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Palpr_1458 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Palpr_0772 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Palpr_2938 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Palpr_0466 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Palpr_1998 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Palpr_2698 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0091 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0389 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0172 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0262 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_2728 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_2732 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Palpr_2315 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Palpr_0251 polysaccharide export protein, BexD/CtrA/VexA family protein K01991 wza; polysaccharide biosynthesis/export protein D Palpr_0398 Soluble ligand binding domain K01991 wza; polysaccharide biosynthesis/export protein D Palpr_0252 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Palpr_1466 Carbohydrate-selective porin OprB K07267 oprB; porin D Palpr_1444 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D Palpr_0931 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD D Palpr_0095 hypothetical protein K21449 ata; trimeric autotransporter adhesin D Palpr_0217 LrgA family protein K06518 cidA; holin-like protein D Palpr_1071 major facilitator superfamily MFS_1 K16211 malY; maltose/moltooligosaccharide transporter D Palpr_3016 major facilitator superfamily MFS_1 K16211 malY; maltose/moltooligosaccharide transporter D Palpr_0156 ethanolamine transporter K16238 eat; ethanolamine permease D Palpr_0940 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D Palpr_1996 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein D Palpr_0551 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein D Palpr_1017 acriflavin resistance protein K07787 cusA; copper/silver efflux system protein D Palpr_0388 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Palpr_2415 acriflavin resistance protein K21134 triC; multidrug efflux pump D Palpr_2906 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein D Palpr_0553 protein of unknown function UPF0060 K09771 TC.SMR3; small multidrug resistance family-3 protein D Palpr_3036 sodium/proton antiporter, NhaA family K03313 nhaA; Na+:H+ antiporter, NhaA family D Palpr_2215 sodium/hydrogen exchanger K26731 CHX; K+:H+ antiporter D Palpr_0700 uracil-xanthine permease K02824 uraA; uracil permease D Palpr_1995 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Palpr_2349 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family D Palpr_2683 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D Palpr_0541 natural resistance-associated macrophage protein K03322 mntH; manganese transport protein D Palpr_1809 arsenical-resistance protein K03325 ACR3; arsenite transporter D Palpr_0513 potassium transporter K03549 kup; KUP system potassium uptake protein D Palpr_2189 conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter D Palpr_1990 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein D Palpr_2628 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein D Palpr_1286 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D Palpr_1500 cell cycle protein K03588 ftsW; cell division protein FtsW D Palpr_0215 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein D Palpr_1670 hypothetical protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein D Palpr_2247 glutathione synthetase K15383 K15383; MtN3 and saliva related transmembrane protein D Palpr_0246 glutathione synthetase K15383 K15383; MtN3 and saliva related transmembrane protein D Palpr_1185 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D Palpr_2095 TonB family protein K03832 tonB; periplasmic protein TonB D Palpr_0462 TonB family protein K03832 tonB; periplasmic protein TonB D Palpr_1371 TonB family protein K03832 tonB; periplasmic protein TonB D Palpr_0861 OmpA/MotB domain protein K03640 pal; peptidoglycan-associated lipoprotein D Palpr_0643 Inorganic diphosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Palpr_1268 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Palpr_0392 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D Palpr_0982 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D Palpr_0390 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Palpr_0391 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Palpr_1799 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Palpr_0264 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system D Palpr_0552 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D Palpr_1997 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D Palpr_1019 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Palpr_2730 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Palpr_0387 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Palpr_0399 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Palpr_0250 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Palpr_2316 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Palpr_2339 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_0241 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_0439 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_1863 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_2520 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_2002 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_0072 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_0471 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_1603 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_2513 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_2010 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_2530 Tetratricopeptide repeat K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_1825 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_3013 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_0437 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D Palpr_2395 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D Palpr_1465 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Palpr_0385 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:ppn02044] D Palpr_2698 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0091 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0389 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0172 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0262 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_2728 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_3008 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Palpr_2748 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC D Palpr_0379 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Palpr_0882 protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB D Palpr_1992 protein translocase subunit secF;protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein D Palpr_1719 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Palpr_1179 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Palpr_2477 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Palpr_1229 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Palpr_1172 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Palpr_0595 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Palpr_2886 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Palpr_1390 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Palpr_1391 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:ppn02042] D Palpr_1859 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Palpr_2875 gliding motility-associated protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family D Palpr_1493 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Palpr_1373 channel protein, hemolysin III family K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:ppn02022] D Palpr_1731 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Palpr_1769 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Palpr_2759 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Palpr_2667 osmosensitive K channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Palpr_1547 integral membrane sensor signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Palpr_2668 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Palpr_1546 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Palpr_2173 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Palpr_2914 two component transcriptional regulator, LuxR family K07692 degU; two-component system, NarL family, response regulator DegU D Palpr_0291 integral membrane sensor signal transduction histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3] D Palpr_0454 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D Palpr_2734 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D Palpr_2735 response regulator receiver and unknown domain protein K02477 K02477; two-component system, LytTR family, response regulator D Palpr_2449 response regulator receiver protein K02477 K02477; two-component system, LytTR family, response regulator D Palpr_1964 integral membrane sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Palpr_1965 integral membrane sensor signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:ppn02035] D Palpr_2169 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Palpr_2847 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ppn04812] D Palpr_2057 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Palpr_1495 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Palpr_1496 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Palpr_1452 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Palpr_1451 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ppn04147] D Palpr_1679 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Palpr_1047 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Palpr_1378 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Palpr_2610 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Palpr_2245 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Palpr_1309 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Palpr_1195 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Palpr_2739 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Palpr_3045 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Palpr_0177 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D Palpr_1884 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Palpr_1718 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Palpr_2977 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Palpr_0827 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_1211 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2153 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2403 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2908 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Palpr_2392 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Palpr_2344 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Palpr_1696 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Palpr_1906 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Palpr_1897 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Palpr_2283 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D Palpr_2139 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Palpr_1479 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Palpr_1104 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Palpr_2582 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Palpr_1488 Alpha-N-acetylglucosaminidase K01205 NAGLU; alpha-N-acetylglucosaminidase [EC:3.2.1.50] D Palpr_1740 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Palpr_2056 IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Palpr_0646 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D Palpr_2608 Aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Palpr_2282 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Palpr_2286 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Palpr_1706 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Palpr_0319 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Palpr_2270 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Palpr_1264 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Palpr_0368 Lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:ppn02048] D Palpr_1959 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Palpr_2955 Type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Palpr_1958 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Palpr_2958 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Palpr_1956 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Palpr_2959 Site-specific DNA-methyltransferase (adenine-specific) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Palpr_2840 Site-specific DNA-methyltransferase (adenine-specific) K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Palpr_0287 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D Palpr_0892 phage shock protein C, PspC K03973 pspC; phage shock protein C D Palpr_1987 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D Palpr_1988 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 D Palpr_0419 putative plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 D Palpr_1576 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 D Palpr_1495 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Palpr_2057 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Palpr_1776 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Palpr_2025 DNA topoisomerase type IIA subunit B region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Palpr_1326 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:ppn04090] D Palpr_0177 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 01504 Antimicrobial resistance genes [BR:ppn01504] D Palpr_0909 transferase hexapeptide repeat containing protein K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D Palpr_0314 transferase hexapeptide repeat containing protein K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D Palpr_0485 Chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] D Palpr_2198 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Palpr_0350 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Palpr_2828 TonB family protein K02172 blaR1; bla regulator protein blaR1 D Palpr_2827 TonB family protein K02172 blaR1; bla regulator protein blaR1 D Palpr_0351 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Palpr_2829 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Palpr_2199 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Palpr_2730 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Palpr_0387 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Palpr_0388 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Palpr_2732 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Palpr_2698 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0091 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0389 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0172 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_0262 outer membrane efflux protein K12340 tolC; outer membrane protein D Palpr_2728 outer membrane efflux protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ppn00537] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ppn03100] D Palpr_R0007 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Palpr_R0027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Palpr_R0049 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Palpr_R0030 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Palpr_R0052 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Palpr_R0058 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Palpr_R0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Palpr_R0063 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Palpr_R0002 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Palpr_R0003 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Palpr_R0062 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Palpr_R0036 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Palpr_R0045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Palpr_R0046 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Palpr_R0054 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Palpr_R0023 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Palpr_R0055 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Palpr_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Palpr_R0019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Palpr_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Palpr_R0064 tRNA-His K14226 tRNA-His; tRNA His D Palpr_R0006 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Palpr_R0028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Palpr_R0050 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Palpr_R0057 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Palpr_R0056 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Palpr_R0022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Palpr_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Palpr_R0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Palpr_R0037 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Palpr_R0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Palpr_R0024 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Palpr_R0061 tRNA-Met K14230 tRNA-Met; tRNA Met D Palpr_R0053 tRNA-Met K14230 tRNA-Met; tRNA Met D Palpr_R0004 tRNA-Met K14230 tRNA-Met; tRNA Met D Palpr_R0059 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Palpr_R0015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Palpr_R0065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Palpr_R0034 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Palpr_R0011 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Palpr_R0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Palpr_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Palpr_R0039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Palpr_R0043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Palpr_R0017 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Palpr_R0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Palpr_R0013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Palpr_R0044 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Palpr_R0020 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Palpr_R0041 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Palpr_R0031 tRNA-Val K14237 tRNA-Val; tRNA Val D Palpr_R0032 tRNA-Val K14237 tRNA-Val; tRNA Val D Palpr_R0005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Palpr_R0051 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Palpr_R0029 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Palpr_R0048 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Palpr_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Palpr_R0026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Palpr_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Palpr_R0047 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Palpr_R0025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Palpr_R0016 RNA component of signal recognition particle K01983 ffs; SRP RNA D Palpr_R0018 RNA component of RNaseP K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Palpr_2617 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D Palpr_2792 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-] D Palpr_2822 carboxynorspermidine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D Palpr_0320 Electron-transferring-flavoproteindehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D Palpr_0601 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D Palpr_0029 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Palpr_0758 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Palpr_0915 thiol peroxidase (atypical 2-Cys peroxiredoxin) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Palpr_0323 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Palpr_1039 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Palpr_2814 sulfide dehydrogenase (flavoprotein) subunit SudB K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Palpr_0636 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Palpr_1806 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Palpr_1697 N-acetylornithine carbamoyltransferase K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11] D Palpr_2225 GCN5-related N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D Palpr_1598 GCN5-related N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D Palpr_1710 GCN5-related N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D Palpr_1816 glycosidase related protein K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281] D Palpr_2670 glycosidase related protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340] D Palpr_0806 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Palpr_1154 glycosyl transferase family 2 K13670 pimF; putative glycosyltransferase [EC:2.4.-.-] D Palpr_0378 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Palpr_0932 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Palpr_2423 phosphoesterase PA-phosphatase related protein K22723 AUR1; inositol phosphorylceramide synthase catalytic subunit [EC:2.7.1.227] D Palpr_0031 degV family protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D Palpr_1923 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Palpr_2304 protein of unknown function DUF303 acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D Palpr_1641 protein of unknown function DUF303 acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D Palpr_1819 Sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D Palpr_0675 hypothetical protein K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117] D Palpr_2738 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D Palpr_1657 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D Palpr_0808 Thioesterase superfamily K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D Palpr_3038 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Palpr_1273 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Palpr_1399 7TM receptor with intracellular metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D Palpr_1606 alkyl sulfatase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D Palpr_2393 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Palpr_1553 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Palpr_2306 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Palpr_1624 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Palpr_1639 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Palpr_0865 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D Palpr_0911 glycoside hydrolase family 43 K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99] D Palpr_1333 alpha amylase catalytic region K21575 susA; neopullulanase [EC:3.2.1.135] D Palpr_2366 Glucuronoarabinoxylan endo-1,4-beta-xylanase K15924 xynC; glucuronoarabinoxylan endo-1,4-beta-xylanase [EC:3.2.1.136] D Palpr_0442 Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139] D Palpr_1644 Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139] D Palpr_1660 glycoside hydrolase family 8 K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156] D Palpr_2119 glycoside hydrolase family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D Palpr_2124 glycoside hydrolase family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D Palpr_1625 glycoside hydrolase family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D Palpr_1623 glycoside hydrolase family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D Palpr_0640 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Palpr_2031 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Palpr_2924 glycosyl transferase family 2 K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Palpr_3033 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Palpr_0952 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D Palpr_2867 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Palpr_2253 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Palpr_1168 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Palpr_2558 protein of unknown function DUF1234 K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D Palpr_2722 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Palpr_0227 aminotransferase class-III K26913 pbfA; (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase [EC:4.3.1.33] D Palpr_1812 N-acylglucosamine 2-epimerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11] D Palpr_2280 RbsD or FucU transport K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D Palpr_0104 Xylose isomerase domain-containing protein TIM barrel K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31] D Palpr_3007 Mur ligase middle domain protein K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D Palpr_1789 FMN-binding domain protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Palpr_1432 nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB D Palpr_1431 Nitrogenase K02592 nifN; nitrogenase molybdenum-iron protein NifN D Palpr_1430 nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D Palpr_1705 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Palpr_0645 alanine racemase domain protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Palpr_1538 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D Palpr_0324 DoxX family protein K15977 K15977; putative oxidoreductase D Palpr_2930 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D Palpr_1708 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Palpr_1365 nitrogen regulatory protein P-II K02589 nifHD1; nitrogen regulatory protein PII 1 D Palpr_1424 nitrogen regulatory protein P-II K02589 nifHD1; nitrogen regulatory protein PII 1 D Palpr_1364 nitrogen regulatory protein P-II K02590 nifHD2; nitrogen regulatory protein PII 2 D Palpr_1425 nitrogen regulatory protein P-II K02590 nifHD2; nitrogen regulatory protein PII 2 D Palpr_0728 Tex-like protein K06959 tex; protein Tex C 99974 Translation D Palpr_0372 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Palpr_1869 trigger factor K03545 tig; trigger factor D Palpr_0112 hypothetical protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D Palpr_0826 SsrA-binding protein K03664 smpB; SsrA-binding protein D Palpr_1307 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D Palpr_1002 OsmC family protein K07397 yhfA; putative redox protein C 99976 Replication and repair D Palpr_2206 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Palpr_1911 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC D Palpr_2659 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D Palpr_1909 Uncharacterized protein family UPF0102 K07460 yraN; putative endonuclease D Palpr_2287 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease D Palpr_2054 DNA protecting protein DprA K04096 smf; DNA processing protein D Palpr_0236 Recombination protein MgsA K07478 ycaJ; putative ATPase D Palpr_1199 3'-5' exonuclease, PolB K07501 K07501; 3'-5' exonuclease D Palpr_1253 transposase IS200-like protein K07491 rayT; REP-associated tyrosine transposase D Palpr_1929 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Palpr_0010 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Palpr_0195 transposase K07491 rayT; REP-associated tyrosine transposase D Palpr_2869 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Palpr_0656 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Palpr_0508 hypothetical protein K07491 rayT; REP-associated tyrosine transposase C 99979 Viral proteins C 99998 Others D Palpr_2540 Rhodanese domain protein K03972 pspE; phage shock protein E D Palpr_2541 Rhodanese domain protein K03972 pspE; phage shock protein E D Palpr_2810 protein of unknown function DUF450 K07504 K07504; predicted type IV restriction endonuclease B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Palpr_1814 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Palpr_1640 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Palpr_0898 amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Palpr_0897 amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Palpr_2731 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Palpr_2726 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Palpr_2835 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D Palpr_2882 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Palpr_2777 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family D Palpr_0120 Bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D Palpr_1890 Bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D Palpr_2024 Peptidase M23 K22719 envC; murein hydrolase activator C 99993 Cell motility D Palpr_1384 TfoX domain-containing protein K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D Palpr_1871 GTP-binding protein TypA K06207 typA; GTP-binding protein D Palpr_0488 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Palpr_0149 PhoH family protein K07175 phoH2; PhoH-like ATPase C 99992 Structural proteins D Palpr_0145 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein D Palpr_1445 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein D Palpr_1446 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein D Palpr_1232 glycoside hydrolase family 25 K07273 acm; lysozyme D Palpr_2687 glycoside hydrolase family 25 K07273 acm; lysozyme D Palpr_0511 glycoside hydrolase family 25 K07273 acm; lysozyme D Palpr_0885 secretion protein HlyD family protein K01993 ABC-2.TX; HlyD family secretion protein D Palpr_0090 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Palpr_0171 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Palpr_2697 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Palpr_3012 hypothetical protein K21571 susE_F; starch-binding outer membrane protein SusE/F D Palpr_3011 hypothetical protein K21571 susE_F; starch-binding outer membrane protein SusE/F C 99994 Others D Palpr_1767 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein B B 09194 Poorly characterized C 99996 General function prediction only D Palpr_2240 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D Palpr_0134 globin K06886 glbN; hemoglobin D Palpr_2602 Patatin K07001 K07001; NTE family protein D Palpr_2430 Patatin K07001 K07001; NTE family protein D Palpr_2029 Patatin K07001 K07001; NTE family protein D Palpr_0178 Patatin K07001 K07001; NTE family protein D Palpr_2357 HAD superfamily (subfamily IA) hydrolase, TIGR02254 K07025 K07025; putative hydrolase of the HAD superfamily D Palpr_1831 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB D Palpr_1833 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D Palpr_0679 ribonuclease BN K07058 K07058; membrane protein D Palpr_1248 Cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D Palpr_0762 Rhodanese domain protein K07146 K07146; UPF0176 protein D Palpr_0334 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein D Palpr_2618 LemA family protein K03744 lemA; LemA protein D Palpr_3040 protein of unknown function DUF1304 K08987 K08987; putative membrane protein D Palpr_0689 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D Palpr_1615 transcriptional regulator K06871 K06871; uncharacterized protein D Palpr_2619 protein of unknown function DUF477 K06872 K06872; uncharacterized protein D Palpr_2424 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein D Palpr_0623 hypothetical protein K06888 K06888; uncharacterized protein D Palpr_2522 alpha/beta hydrolase fold protein K06889 K06889; uncharacterized protein D Palpr_0708 hypothetical protein K06889 K06889; uncharacterized protein D Palpr_0534 protein of unknown function UPF0005 K06890 K06890; uncharacterized protein D Palpr_2276 putative ATPase K06921 K06921; uncharacterized protein D Palpr_2788 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Palpr_1913 hypothetical protein K06950 K06950; uncharacterized protein D Palpr_0894 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Palpr_2968 peptidase membrane zinc metallopeptidase K06973 K06973; uncharacterized protein D Palpr_2222 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein D Palpr_2223 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein D Palpr_1344 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein D Palpr_0201 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07005 K07005; uncharacterized protein D Palpr_1359 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07005 K07005; uncharacterized protein D Palpr_1471 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07005 K07005; uncharacterized protein D Palpr_0274 domain of unknown function DUF1731 K07071 K07071; uncharacterized protein D Palpr_1655 TRAP transporter solute receptor TAXI family protein K07080 K07080; uncharacterized protein D Palpr_1800 permease K07089 K07089; uncharacterized protein D Palpr_0037 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Palpr_0078 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Palpr_2062 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Palpr_2836 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Palpr_2028 metallophosphoesterase K07098 K07098; uncharacterized protein D Palpr_0593 phosphoribosyltransferase K07101 K07101; uncharacterized protein D Palpr_0763 ATPase (AAA+ superfamily)-like protein K07133 K07133; uncharacterized protein D Palpr_0371 hypothetical protein K07133 K07133; uncharacterized protein D Palpr_1255 ATPase K07133 K07133; uncharacterized protein D Palpr_0173 monooxygenase FAD-binding protein K07137 K07137; uncharacterized protein D Palpr_0757 conserved hypothetical protein K07139 K07139; uncharacterized protein D Palpr_1040 protein of unknown function DUF418 K07148 K07148; uncharacterized protein D Palpr_0527 protein of unknown function DUF554 K07150 K07150; uncharacterized protein D Palpr_0740 protein of unknown function DUF164 K07164 K07164; uncharacterized protein D Palpr_2186 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Palpr_0825 protein of unknown function DUF151 K08999 K08999; uncharacterized protein D Palpr_1494 hypothetical protein K09117 K09117; uncharacterized protein D Palpr_2604 HEPN domain protein K09132 K09132; uncharacterized protein D Palpr_0210 protein of unknown function DUF190 K09137 K09137; uncharacterized protein D Palpr_0782 Uncharacterized conserved protein UCP028846 K09704 K09704; uncharacterized protein D Palpr_1124 protein of unknown function DUF354 K09726 K09726; uncharacterized protein D Palpr_1123 protein of unknown function DUF354 K09726 K09726; uncharacterized protein D Palpr_0366 protein of unknown function DUF454 K09790 K09790; uncharacterized protein D Palpr_2598 protein of unknown function DUF456 K09793 K09793; uncharacterized protein D Palpr_1382 protein of unknown function DUF541 K09797 K09797; uncharacterized protein D Palpr_0152 protein of unknown function DUF328 K09861 K09861; uncharacterized protein D Palpr_0942 protein of unknown function DUF486 K09922 K09922; uncharacterized protein D Palpr_0113 Protein of unknown function DUF2059 K09924 K09924; uncharacterized protein D Palpr_0346 Protein of unknown function DUF2059 K09924 K09924; uncharacterized protein D Palpr_2030 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein D Palpr_0084 GumN family protein K09973 K09973; uncharacterized protein D Palpr_0602 GumN family protein K09973 K09973; uncharacterized protein D Palpr_2148 PKD domain containing protein K09992 K09992; uncharacterized protein D Palpr_2883 putative phosphate transport regulator K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 8, 2024