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Mitochondrial Biogenesis - Paenibacillus polymyxa SQR-21
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AMitochondrial DNA transcription, translation, and replication factors
B Mitochondrial DNA-encoded proteins
C Mitochondrial respiratory chain complex I
C Mitochondrial respiratory chain complex III
C Cytochrome c oxidase
C F-type ATPase
B Mitochondrial transcription and translation factors
C Mitochondrial RNA polymerase
C Mitochondrial transcription factors
C Mitochondrial translation factors
D PPSQR21_020120 infB; translation initiation factor if-2 K02519 infB; translation initiation factor IF-2
D PPSQR21_014380 infC; translation initiation factor if-3 K02520 infC; translation initiation factor IF-3
D PPSQR21_016030 translation initiation factor if-3 K02520 infC; translation initiation factor IF-3
D PPSQR21_019990 tsf; elongation factor ts K02357 tsf; elongation factor Ts
D PPSQR21_045380 tufB; translation elongation factor tu K02358 tuf; elongation factor Tu
D PPSQR21_045390 fusA; translation elongation factor g K02355 fusA; elongation factor G
C RNase MRP
C Mitochondrial ribonuclease P
C Other mitochondrial DNA transcription and translation factors
D PPSQR21_033970 era; GTP-binding protein Era K03595 era; GTPase
D PPSQR21_031120 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PPSQR21_034490 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PPSQR21_031730 aspS; tRNA synthetase class ii (d k and n) K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PPSQR21_038290 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PPSQR21_001250 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PPSQR21_020590 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PPSQR21_034850 glutamyl-tRNA(gln) amidotransferase subunit a K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PPSQR21_042680 glutamyl-tRNA(gln) amidotransferase subunit a K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PPSQR21_042670 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PPSQR21_042690 gatC; glutamyl-tRNA(gln) amidotransferase, c subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
B Mitochondrial DNA replication factors
C Mitochondrial DNA polymerase
C Mitochondrial DNA maintenance factors
C Other Mitochondrial DNA replication factors
D PPSQR21_051560 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
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AMitochondrial protein import machinery
B Endoplasmic reticulum membrane and cytosol
C ER-mitochondria encounter structure (ERMES) complex
C Other ER-memrane and cytosol factors
B Outer membrane
C Transporter outer membrane (TOM) complex
C TOB/SAM complex
C Porin
C ERMES complex
C Other outer membrane factor
B Inter membrane space
C Transporter inner membrane (TIM) 9/10 complex
C TIM8/13 complex
C Mitochondrial intermembrane space assembly (MIA) complex
B Inner mambrane
C MICOS complex
C MICOS complex (yeast)
C TIM22 complex
C TIM23 complex
C Mitochondrial calcium uniporter complex
C Other inner membrane factors
B Matrix
C MMC/PAM proteins
D PPSQR21_034310 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PPSQR21_034320 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
C Other matrix factors
D PPSQR21_012500 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PPSQR21_012490 groS; molecular chaperone GroES K04078 groES; chaperonin GroES
D PPSQR21_034300 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
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AMitochondrial quality control factors
B Regulator of mitochondrial biogenesis
C Ubiquitas transcription factors
D PPSQR21_045390 fusA; translation elongation factor g K02355 fusA; elongation factor G
C Nuclear respiratory factors
C Coactivators
C Proteins involved in Fe-S cluster biogenesis
D PPSQR21_038160 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPSQR21_022750 nifS; class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPSQR21_033770 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPSQR21_034310 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
C Other regulator of mitochondrial biogenesis
B Mitochondrial respiratory chain complex assembly factors
C Complex-I assembly factors
D PPSQR21_045000 ATPase-like, para/mind K03593 mrp; ATP-binding protein involved in chromosome partitioning
C Complex-II assembly factors
C Complex-III assembly factors
C Complex-IV assembly factors
D PPSQR21_041640 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PPSQR21_041520 ctaA; cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D PPSQR21_051720 insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PPSQR21_022780 yidC; oxaa K03217 yidC; YidC/Oxa1 family membrane protein insertase
C Complex-V assembly factors
B Mitochondrial dynamics
C Fission and Fusion factors
C Actin cytoskeleton organization
C Mitochondrial movement
C Retention of mitochondria
C Morphogenesis factors
B Mitophagy factors
C Autophagy-related proteins
C Parkin-dependent mechanism factors
C Parkin-independent mechanism factors
D PPSQR21_003230 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PPSQR21_017240 heat shock protein hsp90 K04079 HSP90A; molecular chaperone HtpG
C Other mitophagy factors
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 14, 2024