+D GENES KO #

  KEGG Orthology (KO) - Paracoccus saliphilus

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:psap00010] D JHX88_00185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D JHX88_10235 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JHX88_19180 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D JHX88_17225 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D JHX88_12620 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D JHX88_13610 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D JHX88_17220 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JHX88_04655 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JHX88_04340 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JHX88_13615 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JHX88_06750 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D JHX88_08710 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JHX88_01755 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHX88_13630 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D JHX88_10855 mdeB; alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JHX88_21850 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JHX88_04360 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D JHX88_04355 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D JHX88_04350 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JHX88_10850 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JHX88_10845 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_13600 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_14170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_20890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_00930 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D JHX88_06265 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHX88_13255 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHX88_12900 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D JHX88_03705 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D JHX88_10720 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D JHX88_18740 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:psap00020] D JHX88_12645 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D JHX88_08405 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D JHX88_13970 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D JHX88_13575 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D JHX88_13580 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D JHX88_10845 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_13600 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_14170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_03260 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JHX88_13565 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JHX88_03255 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JHX88_13560 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JHX88_13510 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D JHX88_13490 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D JHX88_13520 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D JHX88_13515 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D JHX88_01210 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D JHX88_13550 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D JHX88_12220 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D JHX88_18740 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D JHX88_10855 mdeB; alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JHX88_21850 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JHX88_04360 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D JHX88_04355 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D JHX88_04350 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JHX88_10850 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:psap00030] D JHX88_10235 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JHX88_10245 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D JHX88_10240 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D JHX88_09405 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D JHX88_11520 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D JHX88_01995 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D JHX88_07015 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D JHX88_10990 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D JHX88_10995 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D JHX88_01290 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D JHX88_04690 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D JHX88_17320 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D JHX88_00810 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D JHX88_11710 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D JHX88_02225 phnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D JHX88_08645 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D JHX88_08335 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D JHX88_04725 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D JHX88_04195 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D JHX88_11425 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D JHX88_11535 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D JHX88_16065 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D JHX88_17380 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D JHX88_17890 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D JHX88_20320 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D JHX88_13610 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D JHX88_17220 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JHX88_17225 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D JHX88_12620 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D JHX88_19180 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:psap00040] D JHX88_07215 cupin domain-containing protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D JHX88_07220 kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D JHX88_12070 kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D JHX88_07225 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D JHX88_12060 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D JHX88_07195 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D JHX88_17170 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D JHX88_07230 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D JHX88_10670 Zn-dependent oxidoreductase K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380] D JHX88_05315 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JHX88_20115 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JHX88_01995 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D JHX88_04285 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D JHX88_15810 rhaI; L-rhamnose catabolism isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D JHX88_15880 NAD(P)-dependent alcohol dehydrogenase K05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9] D JHX88_00720 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D JHX88_03675 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D JHX88_10695 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D JHX88_05005 FGGY-family carbohydrate kinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47] D JHX88_05000 SDR family oxidoreductase K00039 rbtD; ribitol 2-dehydrogenase [EC:1.1.1.56] D JHX88_15860 SDR family oxidoreductase K00039 rbtD; ribitol 2-dehydrogenase [EC:1.1.1.56] C 00051 Fructose and mannose metabolism [PATH:psap00051] D JHX88_00980 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D JHX88_07960 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D JHX88_20085 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D JHX88_14600 SDR family oxidoreductase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434] D JHX88_10675 hypothetical protein K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90] D JHX88_15810 rhaI; L-rhamnose catabolism isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D JHX88_19180 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D JHX88_17225 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D JHX88_12620 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D JHX88_07870 mannitol dehydrogenase family protein K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67] D JHX88_13610 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D JHX88_17220 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JHX88_04655 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JHX88_18725 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:psap00052] D JHX88_03705 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D JHX88_10720 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D JHX88_20115 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JHX88_00185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D JHX88_21730 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D JHX88_21830 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D JHX88_05505 sugar kinase K21621 fk; tagatose kinase [EC:2.7.1.101] D JHX88_21635 class II D-tagatose-bisphosphate aldolase, non-catalytic subunit K21622 tag6PK; D-tagatose 6-phosphate 4-epimerase [EC:5.1.3.40] D JHX88_19180 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D JHX88_03670 Gfo/Idh/MocA family oxidoreductase K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48] D JHX88_16040 mandelate racemase/muconate lactonizing enzyme family protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D JHX88_19435 mandelate racemase/muconate lactonizing enzyme family protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D JHX88_03710 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D JHX88_10685 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D JHX88_17255 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D JHX88_03715 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D JHX88_10690 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D JHX88_00915 DUF3459 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D JHX88_16825 alpha glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D JHX88_21625 phosphosugar isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] C 00053 Ascorbate and aldarate metabolism [PATH:psap00053] D JHX88_05315 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JHX88_04195 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D JHX88_11425 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_03665 dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25] D JHX88_00720 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D JHX88_03675 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D JHX88_10695 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D JHX88_00725 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] D JHX88_10760 mandelate racemase/muconate lactonizing enzyme family protein K20023 talrD-galrD; L-talarate/galactarate dehydratase [EC:4.2.1.156 4.2.1.42] D JHX88_02245 NAD(P)-dependent oxidoreductase K18981 udh; uronate dehydrogenase [EC:1.1.1.203] D JHX88_10730 NAD(P)-dependent oxidoreductase K18981 udh; uronate dehydrogenase [EC:1.1.1.203] C 00500 Starch and sucrose metabolism [PATH:psap00500] D JHX88_00915 DUF3459 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D JHX88_16825 alpha glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D JHX88_20115 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JHX88_09450 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D JHX88_16815 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D JHX88_16810 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D JHX88_16820 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D JHX88_16800 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D JHX88_16805 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D JHX88_06780 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D JHX88_06775 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D JHX88_00185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D JHX88_10235 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JHX88_00980 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:psap00520] D JHX88_12575 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D JHX88_21630 ROK family protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59] D JHX88_21640 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D JHX88_21585 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D JHX88_00980 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D JHX88_00285 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JHX88_13650 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D JHX88_00290 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D JHX88_06365 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D JHX88_01140 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D JHX88_01135 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D JHX88_06000 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JHX88_13905 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D JHX88_15200 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D JHX88_00185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D JHX88_20115 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JHX88_05315 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JHX88_20210 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D JHX88_21730 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D JHX88_21830 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D JHX88_18725 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D JHX88_10235 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JHX88_20085 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D JHX88_07960 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D JHX88_16815 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:psap00620] D JHX88_06265 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHX88_13255 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHX88_10855 mdeB; alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JHX88_21850 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JHX88_04360 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D JHX88_04355 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D JHX88_04350 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JHX88_10850 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JHX88_10845 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_13600 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_14170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_20890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D JHX88_01720 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D JHX88_01755 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHX88_18810 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D JHX88_13095 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D JHX88_11560 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JHX88_13100 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JHX88_01485 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_00930 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D JHX88_17840 malonate decarboxylase subunit alpha K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D JHX88_12900 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D JHX88_06100 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D JHX88_03575 FAD-binding protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D JHX88_17025 FAD-binding protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D JHX88_01865 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D JHX88_08050 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D JHX88_07735 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D JHX88_12425 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D JHX88_19535 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D JHX88_19800 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D JHX88_03370 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D JHX88_11725 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D JHX88_12220 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D JHX88_13550 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D JHX88_01210 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D JHX88_17865 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D JHX88_20285 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D JHX88_18740 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D JHX88_13630 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D JHX88_02870 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D JHX88_01010 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_01605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13980 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_14960 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_18880 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_19975 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_12460 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:psap00630] D JHX88_06265 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHX88_13255 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHX88_02870 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D JHX88_13550 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D JHX88_12645 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D JHX88_08405 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D JHX88_17875 sucD; succinate--CoA ligase subunit alpha K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9] D JHX88_20295 sucD; succinate--CoA ligase subunit alpha K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9] D JHX88_17880 malate--CoA ligase subunit beta K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9] D JHX88_20300 malate--CoA ligase subunit beta K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9] D JHX88_01010 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_01605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13980 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_14960 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_18880 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_19975 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_18885 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D JHX88_10115 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D JHX88_04440 ccrA; crotonyl-CoA carboxylase/reductase K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85] D JHX88_16995 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D JHX88_04430 protein meaA K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63] D JHX88_05830 acyl-CoA/acyl-ACP dehydrogenase K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12] D JHX88_13525 MaoC family dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148] D JHX88_01975 L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D JHX88_17895 CoA ester lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D JHX88_20315 CoA ester lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D JHX88_13540 CoA ester lyase K14451 mcl2; (3S)-malyl-CoA thioesterase [EC:3.1.2.30] D JHX88_11670 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D JHX88_11645 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D JHX88_11690 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D JHX88_01355 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D JHX88_01360 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D JHX88_01365 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D JHX88_09220 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D JHX88_12425 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D JHX88_19535 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D JHX88_19800 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D JHX88_00295 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D JHX88_09120 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D JHX88_15410 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D JHX88_05840 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHX88_08080 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHX88_01085 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_02725 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_15920 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_18635 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_19725 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_06305 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_17860 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_20280 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_20560 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D JHX88_20395 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D JHX88_20400 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D JHX88_20570 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D JHX88_10845 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_13600 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_14170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_20565 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D JHX88_17890 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D JHX88_20320 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D JHX88_04725 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D JHX88_14345 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D JHX88_00505 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D JHX88_00520 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D JHX88_14355 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D JHX88_00525 NAD(P)H-dependent oxidoreductase subunit E K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D JHX88_00510 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D JHX88_14360 NADH-quinone oxidoreductase subunit NuoF K00124 fdoH; formate dehydrogenase iron-sulfur subunit D JHX88_00515 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D JHX88_14365 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D JHX88_20420 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D JHX88_21085 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D JHX88_19395 oxc; oxalyl-CoA decarboxylase K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8] C 00640 Propanoate metabolism [PATH:psap00640] D JHX88_06265 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHX88_13255 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHX88_11730 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D JHX88_17840 malonate decarboxylase subunit alpha K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D JHX88_12900 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D JHX88_01720 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D JHX88_10845 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_13600 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_14170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_10905 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D JHX88_01005 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D JHX88_18810 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D JHX88_13095 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D JHX88_11560 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JHX88_13100 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JHX88_01485 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D JHX88_16845 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D JHX88_03505 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D JHX88_11670 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D JHX88_11645 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D JHX88_16995 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D JHX88_11690 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D JHX88_03255 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JHX88_13560 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JHX88_03260 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JHX88_13565 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JHX88_04220 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D JHX88_10975 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:psap00650] D JHX88_01010 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_01605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13980 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_14960 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_18880 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_19975 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_18690 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D JHX88_21145 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D JHX88_11370 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D JHX88_12815 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D JHX88_15005 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D JHX88_01005 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D JHX88_20970 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D JHX88_10115 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D JHX88_14870 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D JHX88_14875 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D JHX88_18885 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D JHX88_09830 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1] D JHX88_13510 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D JHX88_13490 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D JHX88_13520 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D JHX88_13515 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D JHX88_15940 aspartate aminotransferase family protein K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96] D JHX88_03985 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JHX88_11090 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JHX88_06290 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D JHX88_11405 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D JHX88_06925 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D JHX88_06920 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D JHX88_08025 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D JHX88_00680 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_01795 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_02160 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_02295 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_07370 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_10885 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_15935 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_16955 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_16960 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D JHX88_17825 2,3-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] C 00660 C5-Branched dibasic acid metabolism [PATH:psap00660] D JHX88_00680 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_01795 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_02160 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_02295 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_07370 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_10885 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_15935 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_16955 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_16960 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D JHX88_03255 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JHX88_13560 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JHX88_03260 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JHX88_13565 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JHX88_01975 L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D JHX88_17895 CoA ester lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D JHX88_20315 CoA ester lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D JHX88_13525 MaoC family dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148] D JHX88_19870 RraA family protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D JHX88_11550 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D JHX88_06730 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D JHX88_06725 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D JHX88_04005 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:psap00562] D JHX88_02090 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JHX88_02630 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JHX88_17045 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JHX88_00390 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D JHX88_07410 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D JHX88_11025 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D JHX88_11065 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D JHX88_17370 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D JHX88_11020 TIM barrel protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11] D JHX88_11005 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D JHX88_11070 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D JHX88_17330 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D JHX88_11010 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D JHX88_17335 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D JHX88_11000 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D JHX88_17325 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D JHX88_11015 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D JHX88_17340 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D JHX88_04220 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D JHX88_04655 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:psap00190] D JHX88_12215 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D JHX88_12210 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D JHX88_12205 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D JHX88_12200 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D JHX88_12185 hypothetical protein K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D JHX88_12190 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D JHX88_12175 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D JHX88_12165 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D JHX88_12155 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D JHX88_12150 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D JHX88_12140 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D JHX88_12135 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D JHX88_12130 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D JHX88_12125 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D JHX88_12120 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D JHX88_10645 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D JHX88_13510 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D JHX88_13490 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D JHX88_13520 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D JHX88_13515 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D JHX88_00825 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D JHX88_00820 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D JHX88_00815 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D JHX88_16640 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D JHX88_03530 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D JHX88_15750 heme-copper oxidase subunit III family protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D JHX88_15755 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D JHX88_16625 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D JHX88_15760 cbb3-type cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D JHX88_16875 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D JHX88_15765 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D JHX88_16645 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D JHX88_16630 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D JHX88_09325 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D JHX88_03525 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D JHX88_03520 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D JHX88_03515 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D JHX88_17965 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D JHX88_17960 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D JHX88_05110 cytochrome c family protein K08738 CYC; cytochrome c D JHX88_16870 cytochrome C K08738 CYC; cytochrome c D JHX88_07750 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D JHX88_07760 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D JHX88_07755 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D JHX88_07745 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D JHX88_07765 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D JHX88_12970 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D JHX88_12955 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D JHX88_12960 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D JHX88_12965 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D JHX88_10125 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D JHX88_13715 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D JHX88_02750 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D JHX88_12275 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms [PATH:psap00710] D JHX88_13615 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JHX88_04340 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JHX88_13610 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D JHX88_17220 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JHX88_17225 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D JHX88_12620 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D JHX88_07015 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D JHX88_10990 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D JHX88_10995 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D JHX88_04690 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D JHX88_05085 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D JHX88_04655 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JHX88_01995 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D JHX88_17865 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D JHX88_20285 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D JHX88_18740 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D JHX88_13630 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D JHX88_03370 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D JHX88_11725 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D JHX88_13550 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:psap00680] D JHX88_20910 methanol/ethanol family PQQ-dependent dehydrogenase K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10] D JHX88_18560 gfa; S-(hydroxymethyl)glutathione synthase K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22] D JHX88_20885 gfa; S-(hydroxymethyl)glutathione synthase K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22] D JHX88_20890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D JHX88_20905 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D JHX88_00505 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D JHX88_00520 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D JHX88_14355 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D JHX88_00525 NAD(P)H-dependent oxidoreductase subunit E K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D JHX88_00510 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D JHX88_14360 NADH-quinone oxidoreductase subunit NuoF K00124 fdoH; formate dehydrogenase iron-sulfur subunit D JHX88_00515 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D JHX88_14365 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D JHX88_14345 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D JHX88_06305 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_17860 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_20280 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_05840 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHX88_08080 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHX88_17890 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D JHX88_20320 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D JHX88_08710 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JHX88_17865 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D JHX88_20285 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D JHX88_13550 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D JHX88_17875 sucD; succinate--CoA ligase subunit alpha K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9] D JHX88_20295 sucD; succinate--CoA ligase subunit alpha K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9] D JHX88_17880 malate--CoA ligase subunit beta K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9] D JHX88_20300 malate--CoA ligase subunit beta K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9] D JHX88_01975 L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D JHX88_17895 CoA ester lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D JHX88_20315 CoA ester lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D JHX88_13610 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D JHX88_17220 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JHX88_17225 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D JHX88_12620 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D JHX88_19180 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D JHX88_10600 FAD-dependent oxidoreductase K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2] D JHX88_20405 NAD(P)/FAD-dependent oxidoreductase K18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148] D JHX88_20450 glutamine amidotransferase family protein K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D JHX88_20445 protein GlxC K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] D JHX88_20440 FMN-binding glutamate synthase family protein K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D JHX88_00350 sarcosine oxidase subunit beta family protein K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5] D JHX88_14450 sarcosine oxidase subunit beta family protein K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5] D JHX88_00355 sarcosine oxidase subunit delta K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5] D JHX88_14445 sarcosine oxidase subunit delta K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5] D JHX88_00360 sarcosine oxidase subunit alpha family protein K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5] D JHX88_14440 (2Fe-2S)-binding protein K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5] D JHX88_00365 sarcosine oxidase subunit gamma K22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5] D JHX88_01720 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D JHX88_06265 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHX88_13255 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHX88_06750 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D JHX88_01560 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D JHX88_01565 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D JHX88_20175 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:psap00910] D JHX88_21260 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D JHX88_21275 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D JHX88_21265 NAD(P)/FAD-dependent oxidoreductase K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D JHX88_21270 nirD; nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4] D JHX88_16520 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D JHX88_20170 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D JHX88_05710 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D JHX88_01085 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_02725 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_15920 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_18635 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_19725 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_17125 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D JHX88_17115 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D JHX88_01185 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D JHX88_04435 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:psap00920] D JHX88_20630 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D JHX88_21805 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D JHX88_20635 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JHX88_21810 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JHX88_22105 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D JHX88_20125 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D JHX88_07825 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D JHX88_19075 soxA; sulfur oxidation c-type cytochrome SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D JHX88_19090 soxX; sulfur oxidation c-type cytochrome SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D JHX88_00865 quinoprotein dehydrogenase-associated SoxYZ-like carrier K17226 soxY; sulfur-oxidizing protein SoxY D JHX88_19085 soxY; thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY D JHX88_19080 soxZ; thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D JHX88_19070 soxB; thiosulfohydrolase SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D JHX88_19065 soxC; sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC D JHX88_19060 c-type cytochrome K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6] D JHX88_07820 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D JHX88_01260 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JHX88_21510 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JHX88_06965 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D JHX88_19555 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D JHX88_04480 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D JHX88_12270 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D JHX88_09445 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D JHX88_09580 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D JHX88_02275 long-chain-fatty-acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D JHX88_01020 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D JHX88_05715 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D JHX88_11465 crotonase/enoyl-CoA hydratase family protein K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:psap00061] D JHX88_18810 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D JHX88_13095 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D JHX88_11560 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JHX88_13100 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JHX88_01485 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D JHX88_07290 acyl carrier protein K02078 acpP; acyl carrier protein D JHX88_12740 acyl carrier protein K02078 acpP; acyl carrier protein D JHX88_12750 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D JHX88_12510 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D JHX88_17520 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D JHX88_09295 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D JHX88_14130 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D JHX88_01990 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_03400 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_05485 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_12745 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_09290 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D JHX88_16110 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D JHX88_05225 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHX88_09300 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHX88_18975 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:psap00071] D JHX88_01010 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_01605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13980 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_14960 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_18880 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_19975 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_01005 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D JHX88_11370 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D JHX88_12815 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D JHX88_15005 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D JHX88_01615 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D JHX88_03450 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D JHX88_07325 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D JHX88_15035 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D JHX88_21565 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D JHX88_03490 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D JHX88_18975 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D JHX88_20655 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D JHX88_02150 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D JHX88_07260 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D JHX88_20890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:psap00121] D JHX88_07695 SDR family oxidoreductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:psap00561] D JHX88_17890 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D JHX88_20320 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_10975 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D JHX88_00775 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D JHX88_12505 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D JHX88_03350 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D JHX88_18825 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D JHX88_20210 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] C 00564 Glycerophospholipid metabolism [PATH:psap00564] D JHX88_16360 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D JHX88_00740 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D JHX88_03350 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D JHX88_18825 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D JHX88_10165 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5] D JHX88_19280 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D JHX88_01205 methyltransferase type 12 K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D JHX88_13775 methyltransferase domain-containing protein K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D JHX88_04605 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D JHX88_16890 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D JHX88_12480 CDP-alcohol phosphatidyltransferase family protein K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] D JHX88_13780 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D JHX88_13785 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D JHX88_09565 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D JHX88_01490 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D JHX88_03315 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:psap00600] D JHX88_00385 hypothetical protein K17108 GBA2; non-lysosomal glucosylceramidase [EC:3.2.1.45] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D JHX88_15020 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:psap00230] D JHX88_11710 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D JHX88_08645 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D JHX88_04150 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D JHX88_08650 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D JHX88_09345 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D JHX88_09555 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D JHX88_01060 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D JHX88_04525 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D JHX88_09350 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D JHX88_10185 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D JHX88_10190 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D JHX88_01055 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D JHX88_04325 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D JHX88_02905 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D JHX88_04465 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D JHX88_06980 5'-nucleotidase C-terminal domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D JHX88_01960 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D JHX88_16445 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D JHX88_06355 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D JHX88_12260 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D JHX88_12755 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D JHX88_20860 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D JHX88_09670 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D JHX88_07930 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D JHX88_07935 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D JHX88_05950 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D JHX88_05945 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D JHX88_05940 (2Fe-2S)-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D JHX88_09175 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D JHX88_07945 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D JHX88_04675 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D JHX88_06415 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JHX88_14135 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JHX88_18080 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JHX88_18085 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D JHX88_07985 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D JHX88_00145 HD family hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D JHX88_12415 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D JHX88_04570 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D JHX88_13710 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D JHX88_11780 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D JHX88_11705 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D JHX88_02105 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D JHX88_04755 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D JHX88_05060 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D JHX88_15455 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D JHX88_08340 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D JHX88_09080 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D JHX88_20630 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D JHX88_21805 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D JHX88_20635 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JHX88_21810 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JHX88_22105 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D JHX88_05875 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D JHX88_10025 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3] D JHX88_06205 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5] D JHX88_20030 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D JHX88_06200 (S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D JHX88_16680 ureidoglycolate lyase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D JHX88_21435 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D JHX88_21440 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D JHX88_21450 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:psap00240] D JHX88_20695 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D JHX88_16935 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D JHX88_03360 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D JHX88_03355 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D JHX88_04275 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D JHX88_20345 amidohydrolase/deacetylase family metallohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3] D JHX88_06970 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D JHX88_04270 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D JHX88_16500 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D JHX88_04590 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D JHX88_12755 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D JHX88_08340 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D JHX88_14270 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D JHX88_12800 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D JHX88_04745 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D JHX88_06980 5'-nucleotidase C-terminal domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D JHX88_01960 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D JHX88_11700 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D JHX88_05060 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D JHX88_12990 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D JHX88_11720 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D JHX88_12550 2'-deoxycytidine 5'-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D JHX88_06415 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JHX88_14135 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JHX88_18080 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JHX88_18085 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D JHX88_00145 HD family hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D JHX88_07860 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D JHX88_09270 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D JHX88_11715 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D JHX88_09415 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D JHX88_08055 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D JHX88_07650 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D JHX88_07645 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D JHX88_05490 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D JHX88_12335 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D JHX88_12330 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:psap00250] D JHX88_08035 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_11545 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_01255 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D JHX88_21250 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D JHX88_05320 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D JHX88_00555 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D JHX88_05840 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHX88_08080 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHX88_03975 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D JHX88_08255 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D JHX88_17455 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JHX88_18860 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JHX88_11780 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D JHX88_04325 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D JHX88_03360 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D JHX88_15940 aspartate aminotransferase family protein K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96] D JHX88_03985 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JHX88_11090 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JHX88_17125 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D JHX88_17115 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D JHX88_05710 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D JHX88_09460 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D JHX88_15120 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D JHX88_01085 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_02725 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_15920 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_18635 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_19725 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_20695 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D JHX88_16935 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D JHX88_04525 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D JHX88_00285 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JHX88_04150 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:psap00260] D JHX88_01915 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JHX88_04180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JHX88_01195 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JHX88_13345 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D JHX88_16615 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D JHX88_10100 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D JHX88_06305 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_17860 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_20280 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_05840 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHX88_08080 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHX88_12425 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D JHX88_19535 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D JHX88_19800 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D JHX88_17890 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D JHX88_20320 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D JHX88_06750 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D JHX88_01560 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D JHX88_01565 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D JHX88_20175 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D JHX88_15990 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D JHX88_15985 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D JHX88_12380 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D JHX88_20560 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D JHX88_20395 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D JHX88_20400 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D JHX88_20570 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D JHX88_10845 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_13600 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_14170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_20565 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D JHX88_13780 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D JHX88_13045 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D JHX88_10475 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D JHX88_13050 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D JHX88_00335 aromatic ring-hydroxylating dioxygenase subunit alpha K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251] D JHX88_00340 hybrid-cluster NAD(P)-dependent oxidoreductase K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251] D JHX88_09195 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D JHX88_14910 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D JHX88_14380 sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D JHX88_14555 (2Fe-2S)-binding protein K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D JHX88_19140 sarcosine oxidase subunit alpha family protein K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D JHX88_14390 sarcosine oxidase subunit beta family protein K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D JHX88_14565 FAD-dependent oxidoreductase K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D JHX88_19160 sarcosine oxidase subunit beta family protein K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D JHX88_14375 sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D JHX88_14550 hypothetical protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D JHX88_19135 sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D JHX88_14385 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D JHX88_14560 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D JHX88_19145 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D JHX88_08465 methyltransferase domain-containing protein K24071 gsmt-sdmt; glycine/sarcosine/dimethylglycine N-methyltransferase [EC:2.1.1.156 2.1.1.157] D JHX88_03115 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D JHX88_05845 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JHX88_08245 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JHX88_09825 eutB; hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JHX88_18325 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JHX88_13200 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D JHX88_13155 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D JHX88_18220 trpB; tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D JHX88_04170 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D JHX88_04165 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D JHX88_04175 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] D JHX88_09815 doeA; ectoine hydrolase DoeA K15783 doeA; ectoine hydrolase [EC:3.5.4.44] D JHX88_09810 doeB; N-alpha-acetyl diaminobutyric acid deacetylase DoeB K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125] D JHX88_09875 aspartate aminotransferase family protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] D JHX88_09870 NAD-dependent succinate-semialdehyde dehydrogenase K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-] C 00270 Cysteine and methionine metabolism [PATH:psap00270] D JHX88_06965 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D JHX88_19555 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D JHX88_04480 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D JHX88_18800 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JHX88_07980 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_07975 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_08475 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_08480 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_08485 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D JHX88_16165 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D JHX88_00280 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D JHX88_00275 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D JHX88_16515 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D JHX88_06355 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D JHX88_10795 PLP-dependent transferase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D JHX88_09785 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D JHX88_08490 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D JHX88_16160 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D JHX88_01915 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JHX88_04180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JHX88_01195 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JHX88_13345 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D JHX88_12270 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D JHX88_09445 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D JHX88_09580 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D JHX88_03825 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHX88_03910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHX88_03335 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D JHX88_18520 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D JHX88_08035 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_11545 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_01255 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D JHX88_01260 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JHX88_21510 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JHX88_13550 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D JHX88_03115 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D JHX88_01560 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D JHX88_01565 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:psap00280] D JHX88_03825 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHX88_03910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHX88_13360 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D JHX88_10845 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_13600 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_14170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_01615 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D JHX88_03450 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D JHX88_07325 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D JHX88_15035 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D JHX88_21565 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D JHX88_06250 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D JHX88_01005 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D JHX88_11670 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D JHX88_11645 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D JHX88_16995 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D JHX88_11690 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D JHX88_01635 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D JHX88_09600 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D JHX88_19575 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D JHX88_04220 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_11430 AMP-binding protein K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-] D JHX88_16840 malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-] D JHX88_03505 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D JHX88_06280 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D JHX88_06270 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D JHX88_06295 crotonase/enoyl-CoA hydratase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D JHX88_06290 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D JHX88_11405 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D JHX88_06925 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D JHX88_06920 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D JHX88_01010 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_01605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13980 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_14960 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_18880 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_19975 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:psap00290] D JHX88_05845 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JHX88_08245 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JHX88_09825 eutB; hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JHX88_18325 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JHX88_06730 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D JHX88_06725 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D JHX88_04005 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D JHX88_00680 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_01795 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_02160 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_02295 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_07370 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_10885 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_15935 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_16955 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_16960 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D JHX88_02680 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D JHX88_15715 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D JHX88_03825 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHX88_03910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHX88_13360 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D JHX88_12460 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:psap00300] D JHX88_13345 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D JHX88_01915 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JHX88_04180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JHX88_01195 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JHX88_02645 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JHX88_05480 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JHX88_10460 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JHX88_14525 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JHX88_20540 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JHX88_01150 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D JHX88_20135 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D JHX88_18765 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D JHX88_05230 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JHX88_14110 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JHX88_14430 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JHX88_06625 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D JHX88_18850 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D JHX88_04405 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D JHX88_04410 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:psap00310] D JHX88_13580 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D JHX88_10845 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_13600 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_14170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_03490 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D JHX88_01005 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D JHX88_01010 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_01605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13980 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_14960 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_18880 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_19975 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_03985 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JHX88_11090 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JHX88_02290 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D JHX88_11335 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D JHX88_00590 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JHX88_01980 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JHX88_18465 FAD-binding oxidoreductase K26064 amaD; D-lysine oxidase D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:psap00220] D JHX88_18755 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D JHX88_08255 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D JHX88_17455 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JHX88_18860 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JHX88_07165 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D JHX88_20645 biotin-dependent carboxyltransferase family protein K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D JHX88_21435 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D JHX88_21440 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D JHX88_21450 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D JHX88_04525 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D JHX88_01085 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_02725 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_15920 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_18635 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_19725 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_05710 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D JHX88_08035 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_11545 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_01255 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D JHX88_08125 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D JHX88_02475 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D JHX88_00970 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D JHX88_18765 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D JHX88_00450 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] D JHX88_15930 ArgE/DapE family deacylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:psap00330] D JHX88_19810 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D JHX88_02255 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D JHX88_11160 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D JHX88_14575 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D JHX88_19845 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D JHX88_02250 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D JHX88_11155 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D JHX88_14580 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D JHX88_19840 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D JHX88_15910 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D JHX88_02610 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D JHX88_00275 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D JHX88_00280 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D JHX88_01525 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_07365 pyridoxal phosphate-dependent aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84] D JHX88_06315 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D JHX88_02730 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D JHX88_15915 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D JHX88_10605 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D JHX88_14520 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D JHX88_19775 FAD-dependent oxidoreductase K24954 ooxA; octopine oxidase subunit A D JHX88_19765 FAD-binding oxidoreductase K24955 ooxB; octopine oxidase subunit B D JHX88_07165 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D JHX88_02770 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D JHX88_10490 NAD(P)-binding domain-containing protein K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D JHX88_09460 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D JHX88_15120 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D JHX88_08735 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D JHX88_06390 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D JHX88_08155 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D JHX88_08035 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_11545 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_01255 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D JHX88_00590 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JHX88_01980 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JHX88_14545 proline racemase family protein K22548 lhpL; trans-L-3-hydroxyproline dehydratase [EC:4.2.1.77] C 00340 Histidine metabolism [PATH:psap00340] D JHX88_11800 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D JHX88_11795 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D JHX88_13090 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D JHX88_06080 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D JHX88_13080 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D JHX88_04765 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D JHX88_13085 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D JHX88_04770 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D JHX88_02550 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHX88_04295 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHX88_08305 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D JHX88_21080 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D JHX88_21095 aromatic amino acid lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D JHX88_21090 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D JHX88_21075 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D JHX88_21070 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D JHX88_21085 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:psap00350] D JHX88_08035 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_11545 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_01255 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D JHX88_02550 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHX88_04295 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHX88_10090 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D JHX88_07035 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D JHX88_07045 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D JHX88_07040 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D JHX88_20890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D JHX88_04760 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D JHX88_20555 hypothetical protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D JHX88_03985 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JHX88_11090 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JHX88_14635 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:psap00360] D JHX88_01505 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D JHX88_09510 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D JHX88_14995 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D JHX88_18690 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D JHX88_21145 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D JHX88_08035 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_11545 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_01255 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D JHX88_02550 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHX88_04295 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHX88_10090 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D JHX88_00590 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JHX88_01980 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JHX88_21460 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D JHX88_06315 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D JHX88_02150 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D JHX88_07260 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:psap00380] D JHX88_03430 kynA; tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D JHX88_13790 aminotransferase class V-fold PLP-dependent enzyme K01556 KYNU; kynureninase [EC:3.7.1.3] D JHX88_16560 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D JHX88_13580 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D JHX88_10845 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_13600 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_14170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_03490 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D JHX88_01005 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D JHX88_01010 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_01605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13980 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_14960 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_18880 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_19975 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_12315 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D JHX88_12310 nthB; nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D JHX88_06315 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D JHX88_21460 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:psap00400] D JHX88_07000 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D JHX88_13365 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D JHX88_05310 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D JHX88_20805 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D JHX88_13370 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D JHX88_11745 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D JHX88_00805 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D JHX88_09680 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D JHX88_09700 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D JHX88_09705 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D JHX88_13165 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D JHX88_14005 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D JHX88_13200 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D JHX88_13155 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D JHX88_18220 trpB; tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D JHX88_05590 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D JHX88_04300 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D JHX88_05105 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D JHX88_08035 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_11545 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_01255 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D JHX88_02550 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHX88_04295 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHX88_01505 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:psap00410] D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_09200 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D JHX88_07650 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D JHX88_07645 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D JHX88_05490 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D JHX88_12335 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D JHX88_12330 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D JHX88_03505 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D JHX88_01005 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D JHX88_16845 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D JHX88_04220 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:psap00430] D JHX88_00235 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_00625 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_08400 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_09745 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_19790 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_03975 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D JHX88_01700 nuclear transport factor 2 family protein K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-] D JHX88_01705 FAD-binding oxidoreductase K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-] D JHX88_01710 xsc; sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15] D JHX88_01720 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] C 00440 Phosphonate and phosphinate metabolism [PATH:psap00440] D JHX88_02205 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D JHX88_02195 phnG; phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D JHX88_02200 phnH; phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D JHX88_02220 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D JHX88_02230 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D JHX88_02210 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D JHX88_07845 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:psap00450] D JHX88_18800 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JHX88_07980 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_07975 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_08475 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_08480 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_10795 PLP-dependent transferase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D JHX88_18470 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D JHX88_10220 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D JHX88_20630 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D JHX88_21805 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D JHX88_20635 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JHX88_21810 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JHX88_22105 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D JHX88_08700 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D JHX88_20325 aminotransferase class V-fold PLP-dependent enzyme K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D JHX88_07175 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:psap00460] D JHX88_09450 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D JHX88_00235 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_00625 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_08400 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_09745 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_19790 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_05320 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D JHX88_00555 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D JHX88_06305 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_17860 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_20280 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:psap00470] D JHX88_05900 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D JHX88_00590 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JHX88_01980 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JHX88_13895 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JHX88_04525 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D JHX88_09540 aspartate/glutamate racemase family protein K01776 murI; glutamate racemase [EC:5.1.1.3] D JHX88_04420 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D JHX88_06625 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D JHX88_18850 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D JHX88_00720 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D JHX88_03675 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D JHX88_10695 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00480 Glutathione metabolism [PATH:psap00480] D JHX88_00235 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_00625 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_08400 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_09745 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_19790 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_04305 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D JHX88_11580 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D JHX88_20640 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D JHX88_03335 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D JHX88_18520 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D JHX88_01175 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D JHX88_07130 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D JHX88_09160 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D JHX88_00050 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_01015 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_02575 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_02585 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_06285 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_10800 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_10805 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_12235 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_12605 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_12780 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_17135 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_17800 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_19245 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_19680 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_04695 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D JHX88_13970 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D JHX88_09405 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D JHX88_11520 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D JHX88_10245 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D JHX88_07255 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D JHX88_02610 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D JHX88_00275 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation D JHX88_00385 hypothetical protein K17108 GBA2; non-lysosomal glucosylceramidase [EC:3.2.1.45] C 00540 Lipopolysaccharide biosynthesis [PATH:psap00540] D JHX88_16105 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D JHX88_13875 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D JHX88_07285 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D JHX88_16100 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D JHX88_16095 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D JHX88_16385 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D JHX88_03870 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D JHX88_18370 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D JHX88_20120 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D JHX88_01925 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D JHX88_16380 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D JHX88_07005 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D JHX88_19015 glycosyltransferase family 25 protein K23067 waaX; beta-1,4-galactosyltransferase C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:psap00541] D JHX88_20115 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JHX88_21730 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D JHX88_21830 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D JHX88_05315 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JHX88_14825 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JHX88_22060 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JHX88_22050 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JHX88_22045 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D JHX88_22055 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D JHX88_07960 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D JHX88_20085 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D JHX88_00290 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D JHX88_20470 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00550 Peptidoglycan biosynthesis [PATH:psap00550] D JHX88_06000 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JHX88_13905 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D JHX88_13925 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D JHX88_04420 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D JHX88_04405 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D JHX88_13895 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JHX88_04410 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D JHX88_04600 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D JHX88_17110 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D JHX88_04415 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D JHX88_13930 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D JHX88_17130 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D JHX88_13020 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JHX88_05680 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D JHX88_12435 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D JHX88_04400 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D JHX88_07865 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D JHX88_09475 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:psap00552] D JHX88_17110 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D JHX88_20470 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:psap00543] D JHX88_06965 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D JHX88_19555 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D JHX88_07470 polysaccharide pyruvyl transferase family protein K13665 gumL; pyruvyltransferase B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:psap00730] D JHX88_18615 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D JHX88_06070 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D JHX88_18505 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JHX88_18610 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19] D JHX88_06655 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D JHX88_18600 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D JHX88_09335 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D JHX88_18595 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D JHX88_08915 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D JHX88_11770 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D JHX88_15455 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:psap00740] D JHX88_00110 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D JHX88_06175 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D JHX88_06145 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D JHX88_06180 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D JHX88_09620 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D JHX88_06165 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D JHX88_10110 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D JHX88_11110 alpha/beta fold hydrolase K23462 tgnA; flavin-dependent trigonelline monooxygenase, reductase component [EC:1.5.1.36] D JHX88_00455 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] C 00750 Vitamin B6 metabolism [PATH:psap00750] D JHX88_05220 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D JHX88_05530 pdxY; pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D JHX88_01565 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D JHX88_04185 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D JHX88_07105 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D JHX88_05775 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D JHX88_16615 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:psap00760] D JHX88_21250 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D JHX88_21255 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D JHX88_21245 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D JHX88_14035 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D JHX88_16445 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D JHX88_06980 5'-nucleotidase C-terminal domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D JHX88_01960 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D JHX88_09480 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D JHX88_08340 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D JHX88_03805 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D JHX88_09570 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D JHX88_14030 pncA; bifunctional nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D JHX88_07655 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D JHX88_06310 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D JHX88_09150 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D JHX88_17855 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D JHX88_09145 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D JHX88_17850 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D JHX88_06475 isochorismatase family protein K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107] D JHX88_09830 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1] D JHX88_03985 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JHX88_11090 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:psap00770] D JHX88_00680 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_01795 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_02160 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_02295 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_07370 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_10885 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_15935 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_16955 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHX88_16960 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D JHX88_02680 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D JHX88_15715 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D JHX88_09205 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D JHX88_03280 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D JHX88_09200 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D JHX88_12110 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D JHX88_18510 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D JHX88_08340 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D JHX88_04235 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D JHX88_20800 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D JHX88_05785 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D JHX88_03825 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHX88_03910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHX88_07650 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D JHX88_07645 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D JHX88_05490 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D JHX88_12335 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D JHX88_12330 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:psap00780] D JHX88_09295 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D JHX88_14130 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D JHX88_01990 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_03400 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_05485 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_12745 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_16110 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D JHX88_05225 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHX88_09300 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHX88_12115 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:psap00785] D JHX88_05405 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D JHX88_10175 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D JHX88_10845 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_13600 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_14170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_10855 mdeB; alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JHX88_21850 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JHX88_04360 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D JHX88_04355 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D JHX88_04350 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JHX88_10850 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JHX88_13575 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D JHX88_13580 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D JHX88_20560 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D JHX88_20395 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D JHX88_20400 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D JHX88_20570 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D JHX88_20565 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:psap00790] D JHX88_09585 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D JHX88_08915 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D JHX88_02955 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D JHX88_13640 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D JHX88_12405 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D JHX88_13645 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D JHX88_01480 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D JHX88_00110 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D JHX88_06175 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D JHX88_07720 aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D JHX88_07725 aminotransferase class IV family protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D JHX88_20015 6-pyruvoyl tetrahydropterin synthase family protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D JHX88_01510 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D JHX88_01505 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D JHX88_20010 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D JHX88_20020 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D JHX88_07150 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D JHX88_11755 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D JHX88_14010 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D JHX88_03325 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D JHX88_08260 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D JHX88_00535 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D JHX88_14015 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D JHX88_09880 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D JHX88_00545 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:psap00670] D JHX88_17905 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D JHX88_18320 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D JHX88_06835 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D JHX88_17900 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D JHX88_20425 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D JHX88_06305 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_17860 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_20280 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHX88_09345 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D JHX88_02905 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D JHX88_18785 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D JHX88_20395 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D JHX88_20400 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D JHX88_20570 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D JHX88_07980 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_07975 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_08475 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_08480 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_08055 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D JHX88_20420 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D JHX88_02620 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D JHX88_08470 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D JHX88_08510 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D JHX88_14140 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:psap00860] D JHX88_12380 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D JHX88_12650 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHX88_19190 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHX88_10595 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D JHX88_07705 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D JHX88_08460 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D JHX88_16350 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D JHX88_08455 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D JHX88_07780 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D JHX88_20810 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D JHX88_08190 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D JHX88_17295 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D JHX88_16640 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D JHX88_09325 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D JHX88_21365 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D JHX88_21355 cobG; precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D JHX88_21370 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D JHX88_21390 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D JHX88_21385 cobalamin biosynthesis protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D JHX88_21405 precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D JHX88_21375 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D JHX88_21380 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D JHX88_21360 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D JHX88_21395 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D JHX88_21350 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D JHX88_02855 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D JHX88_02860 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D JHX88_18675 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D JHX88_06770 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D JHX88_12790 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D JHX88_06240 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D JHX88_02760 threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC D JHX88_04875 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D JHX88_04885 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D JHX88_04880 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D JHX88_06245 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D JHX88_14190 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:psap00130] D JHX88_03445 acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D JHX88_01240 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D JHX88_08160 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D JHX88_02115 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D JHX88_14090 UbiH/UbiF family hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D JHX88_00850 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D JHX88_10090 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:psap00900] D JHX88_06655 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D JHX88_04610 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D JHX88_09560 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D JHX88_05770 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D JHX88_11765 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D JHX88_12785 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D JHX88_01010 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_01605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13980 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_14960 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_18880 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_19975 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_06650 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D JHX88_18905 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D JHX88_04600 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:psap00907] D JHX88_01005 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D JHX88_06290 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D JHX88_11405 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D JHX88_07015 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D JHX88_10990 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D JHX88_10995 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics [PATH:psap01059] D JHX88_03065 alpha/beta fold hydrolase K21159 sgcF; epoxide hydrolase C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:psap00523] D JHX88_14825 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JHX88_22060 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JHX88_22050 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JHX88_22045 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D JHX88_22055 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:psap01053] D JHX88_19650 non-ribosomal peptide synthetase K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D JHX88_06840 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] D JHX88_00190 sugar phosphate isomerase/epimerase K15652 asbF; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D JHX88_00205 hypothetical protein K24108 asbA; spermidine-citrate ligase [EC:6.3.2.-] D JHX88_00195 hypothetical protein K24112 asbE; petrobactin synthase [EC:2.-.-.-] C 01055 Biosynthesis of vancomycin group antibiotics D JHX88_22050 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:psap00946] D JHX88_09450 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:psap00311] D JHX88_01630 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11] D JHX88_19990 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:psap00332] D JHX88_08735 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D JHX88_06390 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:psap00261] D JHX88_20630 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D JHX88_21805 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D JHX88_20635 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JHX88_21810 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JHX88_22105 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D JHX88_01915 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JHX88_04180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JHX88_01195 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JHX88_02645 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JHX88_05480 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JHX88_10460 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JHX88_14525 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JHX88_20540 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JHX88_01150 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:psap00521] D JHX88_00185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D JHX88_02090 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JHX88_02630 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JHX88_17045 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JHX88_00390 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D JHX88_07410 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D JHX88_11025 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D JHX88_11065 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D JHX88_17370 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D JHX88_14825 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JHX88_22060 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JHX88_22050 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JHX88_22045 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D JHX88_22055 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D JHX88_00185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:psap00525] D JHX88_14825 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JHX88_22060 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JHX88_22050 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:psap00401] D JHX88_04300 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D JHX88_08035 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_11545 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_01255 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D JHX88_02550 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHX88_04295 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis [PATH:psap00405] D JHX88_02745 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D JHX88_11230 flavin-dependent oxidoreductase K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218] D JHX88_09680 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D JHX88_09700 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D JHX88_12750 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D JHX88_01990 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_03400 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_05485 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_12745 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_05225 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHX88_09300 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D JHX88_07290 acyl carrier protein K02078 acpP; acyl carrier protein D JHX88_12740 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:psap00999] D JHX88_08485 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D JHX88_16165 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D JHX88_20805 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D JHX88_09450 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:psap00362] D JHX88_11220 6-chlorohydroxyquinol-1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D JHX88_11330 alpha/beta fold hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D JHX88_20610 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D JHX88_10585 3-oxoacid CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] D JHX88_10920 3-oxoacid CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] D JHX88_12860 3-oxoacid CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] D JHX88_10580 CoA transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] D JHX88_10925 3-oxoacid CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] D JHX88_12865 3-oxoacid CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] D JHX88_05375 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D JHX88_11225 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D JHX88_20595 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D JHX88_20600 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D JHX88_20585 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D JHX88_07180 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D JHX88_11085 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D JHX88_11340 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D JHX88_12145 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D JHX88_20605 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D JHX88_19870 RraA family protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D JHX88_11550 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D JHX88_20615 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D JHX88_03445 acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D JHX88_01005 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D JHX88_11370 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D JHX88_12815 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D JHX88_15005 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D JHX88_03490 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D JHX88_18690 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D JHX88_21145 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D JHX88_01010 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_01605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13980 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_14960 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_18880 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_19975 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:psap00627] D JHX88_12315 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D JHX88_12310 nthB; nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D JHX88_06315 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D JHX88_11210 benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7] D JHX88_03435 AMP-binding protein K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32] D JHX88_03470 bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40] D JHX88_11215 aldehyde dehydrogenase K21802 vdh; vanillin dehydrogenase [EC:1.2.1.67] C 00364 Fluorobenzoate degradation [PATH:psap00364] D JHX88_11220 6-chlorohydroxyquinol-1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D JHX88_12315 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D JHX88_12310 nthB; nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D JHX88_11225 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00625 Chloroalkane and chloroalkene degradation [PATH:psap00625] D JHX88_20890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D JHX88_13840 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_04750 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_17315 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_18995 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_19580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D JHX88_06485 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D JHX88_09305 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D JHX88_17665 HAD family phosphatase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:psap00361] D JHX88_11220 6-chlorohydroxyquinol-1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D JHX88_11225 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D JHX88_05375 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D JHX88_06485 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D JHX88_09305 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D JHX88_17665 HAD family phosphatase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:psap00623] D JHX88_11220 6-chlorohydroxyquinol-1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D JHX88_11225 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00622 Xylene degradation [PATH:psap00622] D JHX88_05375 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:psap00643] D JHX88_07035 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D JHX88_07045 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D JHX88_07040 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D JHX88_12315 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D JHX88_12310 nthB; nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D JHX88_06315 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D JHX88_05375 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D JHX88_17840 malonate decarboxylase subunit alpha K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation [PATH:psap00791] D JHX88_20645 biotin-dependent carboxyltransferase family protein K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D JHX88_21435 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D JHX88_21440 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D JHX88_21450 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:psap00930] D JHX88_20655 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D JHX88_04195 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D JHX88_11425 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D JHX88_01005 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:psap00626] D JHX88_20890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D JHX88_20595 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D JHX88_20600 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:psap03020] D JHX88_15620 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D JHX88_15615 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D JHX88_15440 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D JHX88_12410 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:psap03010] D JHX88_08690 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D JHX88_04735 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D JHX88_15540 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D JHX88_04290 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D JHX88_15485 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D JHX88_07075 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D JHX88_15590 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D JHX88_15500 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D JHX88_18295 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D JHX88_15575 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D JHX88_15445 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D JHX88_15595 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D JHX88_15450 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D JHX88_15505 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D JHX88_19025 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D JHX88_05585 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D JHX88_15525 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D JHX88_07070 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D JHX88_15550 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D JHX88_20975 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D JHX88_00055 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D JHX88_15635 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D JHX88_15555 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D JHX88_15570 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D JHX88_15565 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D JHX88_15510 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D JHX88_15495 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D JHX88_15625 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D JHX88_07065 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D JHX88_15630 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D JHX88_15640 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D JHX88_18300 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D JHX88_15520 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D JHX88_15465 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D JHX88_15535 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D JHX88_15435 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D JHX88_15490 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D JHX88_05565 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D JHX88_01740 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D JHX88_13310 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D JHX88_15545 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D JHX88_15560 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D JHX88_15515 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D JHX88_06095 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D JHX88_13305 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D JHX88_16475 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D JHX88_15530 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D JHX88_15480 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D JHX88_05560 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D JHX88_12500 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D JHX88_09890 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D JHX88_02515 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D JHX88_01745 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D JHX88_19035 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D JHX88_18290 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHX88_19915 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHX88_18275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHX88_19900 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHX88_19895 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHX88_18270 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:psap00970] D JHX88_09380 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHX88_18280 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHX88_02960 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHX88_19905 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHX88_19365 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHX88_03635 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHX88_02525 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHX88_07600 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHX88_08565 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D JHX88_06375 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JHX88_06370 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JHX88_01930 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D JHX88_18380 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D JHX88_10295 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JHX88_17660 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHX88_11815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHX88_16070 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHX88_08750 tRNA-His K14226 tRNA-His; tRNA His D JHX88_18285 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHX88_19910 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHX88_17100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHX88_07160 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHX88_10030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHX88_05410 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHX88_10180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHX88_06620 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D JHX88_18265 tRNA-Met K14230 tRNA-Met; tRNA Met D JHX88_19225 tRNA-Met K14230 tRNA-Met; tRNA Met D JHX88_09355 tRNA-Ile K14230 tRNA-Met; tRNA Met D JHX88_19890 tRNA-Met K14230 tRNA-Met; tRNA Met D JHX88_14255 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D JHX88_04015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JHX88_05200 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JHX88_12545 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JHX88_13395 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHX88_04495 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHX88_06030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHX88_14855 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHX88_05895 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHX88_16335 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHX88_05990 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHX88_15655 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D JHX88_02700 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D JHX88_08530 tRNA-Val K14237 tRNA-Val; tRNA Val D JHX88_08545 tRNA-Val K14237 tRNA-Val; tRNA Val D JHX88_19040 tRNA-Val K14237 tRNA-Val; tRNA Val D JHX88_12650 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHX88_19190 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHX88_02920 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D JHX88_03240 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D JHX88_10280 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D JHX88_05045 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D JHX88_10285 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D JHX88_05030 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D JHX88_17010 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JHX88_04540 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D JHX88_04530 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D JHX88_14885 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D JHX88_19105 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D JHX88_20325 aminotransferase class V-fold PLP-dependent enzyme K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D JHX88_05140 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D JHX88_07175 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D JHX88_18785 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D JHX88_02555 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D JHX88_00085 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JHX88_17390 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D JHX88_15210 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D JHX88_12585 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JHX88_13735 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D JHX88_11790 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D JHX88_01725 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D JHX88_01765 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D JHX88_06360 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JHX88_18555 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:psap03060] D JHX88_15460 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JHX88_15650 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JHX88_12795 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D JHX88_08360 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D JHX88_08365 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D JHX88_08355 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D JHX88_02490 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JHX88_08115 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JHX88_00140 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D JHX88_05610 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D JHX88_05095 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D JHX88_10230 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D JHX88_14320 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D JHX88_14315 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D JHX88_14310 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D JHX88_05790 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D JHX88_02900 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:psap04122] D JHX88_18505 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JHX88_01260 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JHX88_21510 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JHX88_00530 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D JHX88_06045 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D JHX88_03325 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D JHX88_11755 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D JHX88_03320 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D JHX88_14010 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D JHX88_08260 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D JHX88_18605 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:psap03018] D JHX88_06765 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D JHX88_08440 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D JHX88_08710 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JHX88_19020 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D JHX88_12390 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D JHX88_14100 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D JHX88_17400 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D JHX88_19940 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D JHX88_20815 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D JHX88_12105 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D JHX88_00840 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JHX88_13700 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JHX88_03165 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D JHX88_13715 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D JHX88_02750 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D JHX88_12275 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D JHX88_08220 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:psap03030] D JHX88_13225 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHX88_20795 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHX88_06785 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JHX88_04840 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JHX88_07855 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JHX88_00075 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JHX88_07135 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JHX88_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JHX88_04265 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D JHX88_06120 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D JHX88_13355 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHX88_22005 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHX88_12770 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D JHX88_16675 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D JHX88_12710 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JHX88_06060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:psap03410] D JHX88_01655 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D JHX88_06015 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D JHX88_09710 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D JHX88_20660 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D JHX88_00845 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D JHX88_14075 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D JHX88_18870 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D JHX88_03925 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D JHX88_07995 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D JHX88_20720 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D JHX88_12710 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JHX88_12625 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JHX88_06060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:psap03420] D JHX88_07715 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D JHX88_11805 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D JHX88_18460 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D JHX88_03305 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D JHX88_06610 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JHX88_13260 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JHX88_12710 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JHX88_06060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:psap03430] D JHX88_00800 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D JHX88_09755 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D JHX88_06610 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JHX88_13260 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JHX88_08655 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D JHX88_06645 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D JHX88_12625 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JHX88_13355 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHX88_22005 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHX88_06785 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JHX88_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JHX88_04840 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JHX88_00075 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JHX88_07855 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JHX88_13225 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHX88_20795 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHX88_07135 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JHX88_06060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:psap03440] D JHX88_12625 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JHX88_13355 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHX88_22005 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHX88_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D JHX88_05820 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D JHX88_04830 recR; recombination protein RecR K06187 recR; recombination protein RecR D JHX88_05025 recA; recombinase RecA K03553 recA; recombination protein RecA D JHX88_12710 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JHX88_06825 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D JHX88_06830 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D JHX88_06820 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D JHX88_06065 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D JHX88_06785 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JHX88_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JHX88_04840 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JHX88_00075 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JHX88_07855 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JHX88_13225 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHX88_20795 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHX88_07135 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JHX88_01295 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:psap02010] D JHX88_14340 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein D JHX88_20235 ABC transporter permease K05773 tupB; tungstate transport system permease protein D JHX88_20230 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D JHX88_08685 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D JHX88_08680 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D JHX88_08675 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D JHX88_04920 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JHX88_09625 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JHX88_13325 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JHX88_17060 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JHX88_04915 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JHX88_05890 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JHX88_17055 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JHX88_04925 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JHX88_17050 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JHX88_20580 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JHX88_00795 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D JHX88_00790 thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein D JHX88_00785 ATP-binding cassette domain-containing protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D JHX88_12290 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D JHX88_05160 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D JHX88_05155 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D JHX88_05165 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D JHX88_13060 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D JHX88_18695 choX; choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D JHX88_20680 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D JHX88_13065 choW; choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D JHX88_20685 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D JHX88_13070 choV; choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D JHX88_20690 betaine/proline/choline family ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D JHX88_00310 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D JHX88_16760 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D JHX88_00315 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JHX88_00330 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JHX88_16765 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JHX88_16775 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JHX88_00320 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D JHX88_16770 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D JHX88_07875 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_14480 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_15195 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_19400 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_21590 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_05415 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_07375 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_15875 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_17575 carbohydrate ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D JHX88_17580 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D JHX88_17585 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D JHX88_07890 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D JHX88_07885 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D JHX88_07880 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein D JHX88_00900 carbohydrate ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein D JHX88_00905 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein D JHX88_00910 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein D JHX88_00920 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10235 aglK; alpha-glucoside transport system ATP-binding protein D JHX88_17605 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10235 aglK; alpha-glucoside transport system ATP-binding protein D JHX88_03645 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D JHX88_03655 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D JHX88_03650 sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_03410 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D JHX88_16420 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D JHX88_03420 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D JHX88_16430 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D JHX88_03415 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D JHX88_16440 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D JHX88_03425 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D JHX88_16425 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D JHX88_05430 carbohydrate ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D JHX88_05425 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D JHX88_05420 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D JHX88_04210 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D JHX88_20180 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D JHX88_04205 ABC transporter permease K10440 rbsC; ribose transport system permease protein D JHX88_20185 ABC transporter permease K10440 rbsC; ribose transport system permease protein D JHX88_04200 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D JHX88_20190 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D JHX88_05540 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D JHX88_03680 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D JHX88_03690 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D JHX88_03695 yjfF; sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein D JHX88_03685 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D JHX88_04985 sugar ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D JHX88_04995 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D JHX88_04990 sugar ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D JHX88_00610 sugar ABC transporter substrate-binding protein K10552 frcB; fructose transport system substrate-binding protein D JHX88_00615 ABC transporter permease K10553 frcC; fructose transport system permease protein D JHX88_00620 sugar ABC transporter ATP-binding protein K10554 frcA; fructose transport system ATP-binding protein D JHX88_15825 rhaS; rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D JHX88_15835 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein D JHX88_15840 ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein D JHX88_15830 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D JHX88_15340 D-ribose ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D JHX88_17180 D-ribose ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D JHX88_15325 ABC transporter permease K17203 eryF; erythritol transport system permease protein D JHX88_17185 ABC transporter permease K17203 eryF; erythritol transport system permease protein D JHX88_15330 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D JHX88_17190 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D JHX88_11035 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein D JHX88_11050 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein D JHX88_11045 ABC transporter permease K17214 K17214; inositol transport system permease protein D JHX88_11040 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein D JHX88_00770 carbohydrate ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D JHX88_00755 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein D JHX88_00760 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein D JHX88_00745 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D JHX88_00750 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D JHX88_02830 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D JHX88_02825 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D JHX88_02820 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D JHX88_02815 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D JHX88_08930 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D JHX88_08975 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D JHX88_15085 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D JHX88_08980 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D JHX88_15080 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D JHX88_08985 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D JHX88_15075 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D JHX88_08990 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D JHX88_15070 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D JHX88_02170 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D JHX88_09060 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D JHX88_17085 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D JHX88_02175 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D JHX88_02180 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D JHX88_09045 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D JHX88_09050 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D JHX88_17070 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D JHX88_17075 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D JHX88_02165 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D JHX88_09055 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D JHX88_17080 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D JHX88_15090 transporter substrate-binding domain-containing protein K10036 glnH; glutamine transport system substrate-binding protein D JHX88_15095 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein D JHX88_15100 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D JHX88_10440 transporter substrate-binding domain-containing protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D JHX88_10830 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D JHX88_15400 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D JHX88_10445 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein D JHX88_10825 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein D JHX88_15395 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein D JHX88_10450 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D JHX88_10820 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D JHX88_15390 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D JHX88_10455 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D JHX88_10815 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D JHX88_15385 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D JHX88_02050 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein D JHX88_02045 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein D JHX88_02040 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein D JHX88_10055 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHX88_13745 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHX88_18955 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHX88_20410 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHX88_10050 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHX88_13760 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHX88_18965 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHX88_10045 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D JHX88_13765 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D JHX88_18960 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D JHX88_10040 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHX88_13750 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHX88_18970 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHX88_10035 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHX88_13755 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHX88_18950 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHX88_04870 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D JHX88_04865 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D JHX88_04860 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D JHX88_03200 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D JHX88_04855 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D JHX88_04850 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D JHX88_11515 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D JHX88_16900 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D JHX88_16910 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein D JHX88_16915 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein D JHX88_16920 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D JHX88_16925 dipeptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D JHX88_00575 glutathione ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D JHX88_00570 gsiC; glutathione ABC transporter permease GsiC K13890 gsiC; glutathione transport system permease protein D JHX88_00565 ABC transporter permease subunit K13891 gsiD; glutathione transport system permease protein D JHX88_00580 dipeptide ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D JHX88_05115 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D JHX88_05120 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D JHX88_05125 ABC transporter permease K13895 yejE; microcin C transport system permease protein D JHX88_05130 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D JHX88_19310 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D JHX88_11250 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D JHX88_19315 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D JHX88_19320 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D JHX88_11260 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D JHX88_19325 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D JHX88_16010 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D JHX88_16015 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D JHX88_16020 ATP-binding cassette domain-containing protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D JHX88_17685 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D JHX88_20145 metal-binding protein ZinT K09815 znuA; zinc transport system substrate-binding protein D JHX88_17700 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D JHX88_17695 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D JHX88_20060 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D JHX88_20050 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein D JHX88_20045 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein D JHX88_20055 manganese/iron ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein D JHX88_13990 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D JHX88_13995 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein D JHX88_14000 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D JHX88_18365 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D JHX88_21740 sugar transporter K10107 kpsE; capsular polysaccharide transport system permease protein D JHX88_21745 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D JHX88_18360 ATP-binding cassette domain-containing protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D JHX88_21735 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D JHX88_04135 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D JHX88_04130 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D JHX88_08385 heme ABC transporter permease K02195 ccmC; heme exporter protein C D JHX88_08380 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D JHX88_08375 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D JHX88_07125 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D JHX88_07120 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D JHX88_03885 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D JHX88_18830 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D JHX88_18835 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D JHX88_08085 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D JHX88_15660 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D JHX88_08110 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D JHX88_21660 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase C 02060 Phosphotransferase system (PTS) [PATH:psap02060] D JHX88_18720 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D JHX88_18725 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D JHX88_01910 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D JHX88_03895 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:psap03070] D JHX88_01940 TolC family outer membrane protein K12340 tolC; outer membrane protein D JHX88_08360 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D JHX88_08365 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D JHX88_15650 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JHX88_12795 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D JHX88_15460 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JHX88_08355 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D JHX88_02490 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JHX88_08115 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JHX88_10230 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D JHX88_00140 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D JHX88_05610 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D JHX88_14320 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D JHX88_14315 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D JHX88_14310 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D JHX88_21950 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D JHX88_05985 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D JHX88_14215 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D JHX88_14765 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D JHX88_18030 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D JHX88_02365 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D JHX88_18010 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D JHX88_02450 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D JHX88_02445 tssL; type VI secretion system protein TssL, long form K11892 impK; type VI secretion system protein ImpK D JHX88_02385 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:psap02020] D JHX88_04685 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D JHX88_09000 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D JHX88_15060 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D JHX88_08915 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D JHX88_02955 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D JHX88_08930 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D JHX88_08975 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D JHX88_15085 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D JHX88_08555 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D JHX88_03920 response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D JHX88_04710 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D JHX88_20715 flagellin K02406 fliC; flagellin D JHX88_06695 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D JHX88_10385 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D JHX88_10390 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D JHX88_10370 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D JHX88_10375 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D JHX88_10380 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit D JHX88_09630 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D JHX88_01780 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_00245 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_00445 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_00695 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_09650 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_10890 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_11300 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_11390 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_11455 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_16315 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_00250 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D JHX88_00700 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D JHX88_09645 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D JHX88_10895 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D JHX88_11305 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D JHX88_09640 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D JHX88_16325 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D JHX88_11385 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D JHX88_00435 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D JHX88_00705 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D JHX88_09325 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D JHX88_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D JHX88_09790 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D JHX88_15430 autoinducer binding domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D JHX88_04425 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D JHX88_15165 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D JHX88_18540 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D JHX88_18630 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D JHX88_03125 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D JHX88_03130 sigma-54-dependent Fis family transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D JHX88_01085 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_02725 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_15920 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_18635 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_19725 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_03135 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D JHX88_03140 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D JHX88_09015 sigma-54-dependent Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D JHX88_08100 short-chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter D JHX88_01010 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_01605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13980 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_14960 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_18880 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_19975 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_04520 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D JHX88_17475 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D JHX88_17470 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D JHX88_05015 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D JHX88_06395 histidine phosphotransferase K13588 chpT; histidine phosphotransferase ChpT D JHX88_06055 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D JHX88_02560 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP D JHX88_09850 dctP; TRAP transporter substrate-binding protein DctP K11688 dctP; C4-dicarboxylate-binding protein DctP D JHX88_02565 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D JHX88_03230 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_06500 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_11590 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_14595 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_02570 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_09840 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_13290 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_07420 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D JHX88_07425 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D JHX88_00165 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D JHX88_00155 ActR/PrrA/RegA family redox response regulator transcription factor K15012 regA; two-component system, response regulator RegA D JHX88_00825 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D JHX88_00820 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D JHX88_00815 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D JHX88_05110 cytochrome c family protein K08738 CYC; cytochrome c D JHX88_16870 cytochrome C K08738 CYC; cytochrome c D JHX88_17965 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D JHX88_17960 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D JHX88_01940 TolC family outer membrane protein K12340 tolC; outer membrane protein D JHX88_06155 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:psap04148] D JHX88_07165 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D JHX88_02610 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D JHX88_00825 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:psap02024] D JHX88_03165 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D JHX88_09680 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D JHX88_09700 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D JHX88_07000 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D JHX88_02745 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D JHX88_10390 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D JHX88_15430 autoinducer binding domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D JHX88_21865 histidine kinase K18096 bjaI; acyl-homoserine lactone synthase [EC:2.3.1.228 2.3.1.229 2.3.1.-] D JHX88_21860 autoinducer binding domain-containing protein K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1 D JHX88_21930 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D JHX88_21925 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC D JHX88_21920 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD D JHX88_21915 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D JHX88_21910 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D JHX88_21900 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D JHX88_21895 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D JHX88_21885 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D JHX88_21880 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI D JHX88_06935 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D JHX88_06940 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D JHX88_10630 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D JHX88_19745 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D JHX88_20490 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D JHX88_06950 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D JHX88_10620 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D JHX88_19760 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D JHX88_06945 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D JHX88_10625 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D JHX88_19755 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D JHX88_06930 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D JHX88_10635 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D JHX88_19750 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D JHX88_10055 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHX88_13745 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHX88_18955 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHX88_20410 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHX88_10050 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHX88_13760 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHX88_18965 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHX88_10045 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D JHX88_13765 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D JHX88_18960 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D JHX88_10040 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHX88_13750 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHX88_18970 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHX88_10035 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHX88_13755 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHX88_18950 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHX88_18975 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D JHX88_17690 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D JHX88_00110 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D JHX88_06145 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D JHX88_04870 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D JHX88_04865 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D JHX88_04860 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D JHX88_03200 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D JHX88_04855 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D JHX88_04850 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D JHX88_00220 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_03185 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_03595 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_03780 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_04965 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_05280 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_05285 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_07615 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_08020 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_09720 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_10015 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_10020 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_12475 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_15950 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_16270 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_19220 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_19255 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_19460 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_19520 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_19835 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_20360 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_00225 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_03190 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_03395 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_03600 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_03785 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_04955 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_05275 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_07620 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_09725 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_10010 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_11510 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_15955 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_16265 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_19215 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_19270 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_19465 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_19525 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_19830 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_20355 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_00230 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_03195 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_03390 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_03605 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_03790 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_04950 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_05270 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_07625 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_09730 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_10005 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_11505 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_15960 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_16260 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_19210 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_19275 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_19470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_19530 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_19825 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_20350 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_00210 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_03385 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_03610 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_04945 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_05290 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_07630 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_09735 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_09990 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_11500 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_15965 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_16255 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_19205 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_19260 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_19475 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_19515 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_20340 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_00215 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_09740 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_09985 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_11495 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_19200 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_19265 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_20335 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_02490 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JHX88_15650 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JHX88_12795 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D JHX88_15460 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JHX88_08355 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D JHX88_08115 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JHX88_10230 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D JHX88_00140 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D JHX88_05610 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:psap02030] D JHX88_04210 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D JHX88_20180 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D JHX88_11515 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D JHX88_16900 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D JHX88_04330 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D JHX88_14280 FliM/FliN family flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D JHX88_06665 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D JHX88_06695 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D JHX88_04315 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D JHX88_18940 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:psap02040] D JHX88_16725 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D JHX88_06675 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D JHX88_04330 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D JHX88_16710 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D JHX88_02325 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D JHX88_06680 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D JHX88_16755 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D JHX88_14280 FliM/FliN family flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D JHX88_06665 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D JHX88_06660 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D JHX88_16730 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D JHX88_06710 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D JHX88_06705 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D JHX88_06715 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D JHX88_16745 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D JHX88_16715 FlgB family protein K02387 flgB; flagellar basal-body rod protein FlgB D JHX88_16720 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D JHX88_02320 flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D JHX88_18935 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D JHX88_16735 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF D JHX88_16740 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D JHX88_16750 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D JHX88_18920 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D JHX88_18930 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D JHX88_18925 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D JHX88_20715 flagellin K02406 fliC; flagellin D JHX88_06695 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D JHX88_04315 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D JHX88_18940 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D JHX88_06125 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D JHX88_08710 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:psap04980] D JHX88_18675 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D JHX88_16490 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-] D JHX88_11690 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D JHX88_07980 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_07975 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_08475 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHX88_08480 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:psap01501] D JHX88_00095 porin K08720 ompU; outer membrane protein OmpU D JHX88_12575 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D JHX88_19985 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D JHX88_04425 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D JHX88_04870 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D JHX88_04865 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D JHX88_04860 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D JHX88_03200 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D JHX88_04855 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D JHX88_04850 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D JHX88_19990 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D JHX88_08660 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_09185 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_11280 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_08665 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_09180 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_11275 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_17245 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_01940 TolC family outer membrane protein K12340 tolC; outer membrane protein D JHX88_13020 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JHX88_12435 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D JHX88_04400 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:psap01502] D JHX88_13895 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JHX88_05900 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D JHX88_04410 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D JHX88_04415 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D JHX88_13930 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:psap01503] D JHX88_13015 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JHX88_04710 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D JHX88_08660 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_09185 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_11280 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_08665 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_09180 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_11275 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_17245 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_01940 TolC family outer membrane protein K12340 tolC; outer membrane protein D JHX88_16105 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:psap01000] C 01001 Protein kinases [BR:psap01001] D JHX88_14665 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D JHX88_01595 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D JHX88_04685 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D JHX88_08555 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D JHX88_10385 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D JHX88_09630 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D JHX88_09790 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D JHX88_03125 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D JHX88_03135 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D JHX88_04520 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D JHX88_17475 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D JHX88_09020 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D JHX88_17915 cache domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D JHX88_20220 cache domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D JHX88_05015 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D JHX88_07420 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D JHX88_00165 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:psap01009] D JHX88_08490 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D JHX88_16160 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D JHX88_20175 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:psap01002] D JHX88_02900 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D JHX88_09175 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D JHX88_04150 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D JHX88_17125 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D JHX88_00285 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JHX88_07280 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D JHX88_09160 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D JHX88_09245 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D JHX88_05555 M3 family oligoendopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D JHX88_01090 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D JHX88_01095 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D JHX88_01175 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D JHX88_07130 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D JHX88_12370 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D JHX88_07640 M20/M25/M40 family metallo-hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D JHX88_05230 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JHX88_14110 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JHX88_14430 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JHX88_07335 amidohydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32] D JHX88_19485 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D JHX88_20030 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D JHX88_03940 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D JHX88_14460 aminopeptidase P family protein K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D JHX88_12635 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D JHX88_09320 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D JHX88_06850 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D JHX88_04615 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D JHX88_00560 M55 family metallopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D JHX88_19960 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D JHX88_00585 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D JHX88_04710 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D JHX88_07865 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D JHX88_09475 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D JHX88_13125 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D JHX88_20895 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D JHX88_08550 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D JHX88_14020 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D JHX88_05790 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D JHX88_08155 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D JHX88_06760 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D JHX88_01630 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11] D JHX88_03290 S49 family peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-] D JHX88_01335 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein D JHX88_01105 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D JHX88_00555 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D JHX88_00235 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_00625 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_08400 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_09745 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_19790 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHX88_02085 TldD/PmbA family protein K03592 pmbA; PmbA protein D JHX88_16650 tldD; metalloprotease TldD K03568 tldD; TldD protein D JHX88_05675 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin D JHX88_04705 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D JHX88_04700 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:psap01003] D JHX88_16810 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D JHX88_17130 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D JHX88_05680 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D JHX88_13020 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JHX88_01900 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D JHX88_06780 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:psap01005] D JHX88_16105 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D JHX88_16095 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D JHX88_13875 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D JHX88_07285 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D JHX88_18200 phosphatase PAP2 family protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-] D JHX88_16100 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D JHX88_16385 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D JHX88_07005 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D JHX88_01925 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D JHX88_16380 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D JHX88_18370 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D JHX88_20120 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D JHX88_03870 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D JHX88_19015 glycosyltransferase family 25 protein K23067 waaX; beta-1,4-galactosyltransferase D JHX88_01325 glycosyltransferase family 4 protein K12989 lpcC; mannosyltransferase [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:psap01011] D JHX88_06000 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JHX88_13905 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D JHX88_13925 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D JHX88_04420 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D JHX88_04405 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D JHX88_13895 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JHX88_05900 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D JHX88_09540 aspartate/glutamate racemase family protein K01776 murI; glutamate racemase [EC:5.1.1.3] D JHX88_04415 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D JHX88_13930 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D JHX88_17110 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D JHX88_18545 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D JHX88_13020 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JHX88_05680 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D JHX88_12435 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D JHX88_04400 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D JHX88_07865 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D JHX88_09475 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D JHX88_17130 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D JHX88_07280 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D JHX88_19960 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D JHX88_02640 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D JHX88_16585 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D JHX88_14125 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D JHX88_13015 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:psap01004] D JHX88_12750 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D JHX88_12510 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D JHX88_17520 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D JHX88_09295 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D JHX88_14130 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D JHX88_01990 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_03400 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_05485 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_12745 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHX88_09290 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D JHX88_16110 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D JHX88_05225 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHX88_09300 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHX88_15020 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D JHX88_15165 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D JHX88_06265 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHX88_13255 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHX88_11730 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D JHX88_12900 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D JHX88_18975 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D JHX88_01450 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D JHX88_12505 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D JHX88_03350 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D JHX88_18825 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:psap01008] D JHX88_19650 non-ribosomal peptide synthetase K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D JHX88_00195 hypothetical protein K24112 asbE; petrobactin synthase [EC:2.-.-.-] D JHX88_03065 alpha/beta fold hydrolase K21159 sgcF; epoxide hydrolase C 01006 Prenyltransferases [BR:psap01006] D JHX88_06650 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D JHX88_18905 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D JHX88_04600 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D JHX88_04585 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D JHX88_01240 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D JHX88_16640 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:psap01007] D JHX88_15210 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D JHX88_12650 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHX88_19190 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHX88_06085 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D JHX88_06360 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JHX88_18555 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JHX88_05140 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D JHX88_12585 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JHX88_07175 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D JHX88_17390 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D JHX88_02555 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D JHX88_00085 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JHX88_17010 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JHX88_11790 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D JHX88_04540 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D JHX88_04530 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D JHX88_19105 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D JHX88_13735 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D JHX88_14885 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D JHX88_05030 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D JHX88_01725 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D JHX88_01765 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D JHX88_08035 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_11545 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JHX88_01255 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D JHX88_07365 pyridoxal phosphate-dependent aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84] D JHX88_02550 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHX88_04295 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHX88_15990 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D JHX88_12380 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D JHX88_18800 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JHX88_03505 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D JHX88_18765 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D JHX88_04170 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D JHX88_10595 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D JHX88_00590 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JHX88_01980 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JHX88_03825 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHX88_03910 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHX88_05840 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHX88_08080 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHX88_01565 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 [BR:psap00199] D JHX88_02140 cytochrome P450 K21034 virH2; cytochrome P450 family 104 C 00194 Photosynthesis proteins [BR:psap00194] D JHX88_07765 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D JHX88_07760 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D JHX88_07755 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D JHX88_07750 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D JHX88_07745 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D JHX88_12955 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D JHX88_12960 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D JHX88_12965 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D JHX88_12970 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D JHX88_12975 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:psap03000] D JHX88_11235 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D JHX88_16485 bifunctional transcriptional activator/DNA repair protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D JHX88_06995 GlxA family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D JHX88_02235 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D JHX88_03955 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D JHX88_11620 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D JHX88_14570 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D JHX88_17740 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D JHX88_20620 pcaQ; pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D JHX88_02625 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D JHX88_07920 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D JHX88_04500 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D JHX88_19985 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D JHX88_01610 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D JHX88_11605 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D JHX88_12845 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D JHX88_00595 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D JHX88_00735 DeoR/GlpR transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D JHX88_04980 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D JHX88_11055 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D JHX88_11060 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D JHX88_14505 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D JHX88_17560 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D JHX88_17565 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D JHX88_20205 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D JHX88_00690 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D JHX88_19370 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D JHX88_02190 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D JHX88_21040 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D JHX88_21065 UTRA domain-containing protein K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D JHX88_21100 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D JHX88_00395 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D JHX88_11355 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D JHX88_00240 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D JHX88_00650 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D JHX88_01350 FCD domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D JHX88_12945 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D JHX88_14640 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D JHX88_19430 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D JHX88_20415 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D JHX88_01680 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D JHX88_21520 GntR family transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator D JHX88_11120 GntR family transcriptional regulator K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator D JHX88_13055 betI; transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D JHX88_12325 TetR family transcriptional regulator C-terminal domain-containing protein K09017 rutR; TetR/AcrR family transcriptional regulator D JHX88_12690 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D JHX88_01500 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D JHX88_03980 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D JHX88_10790 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D JHX88_15115 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D JHX88_21845 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D JHX88_09860 Lrp/AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes D JHX88_00035 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D JHX88_02685 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D JHX88_07810 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D JHX88_21860 autoinducer binding domain-containing protein K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1 D JHX88_15430 autoinducer binding domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D JHX88_17425 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D JHX88_03760 helix-turn-helix domain-containing protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D JHX88_21235 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D JHX88_01380 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D JHX88_20065 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D JHX88_17690 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D JHX88_05835 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D JHX88_20515 helix-turn-helix domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D JHX88_13950 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D JHX88_01665 helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D JHX88_09030 helix-turn-helix domain-containing protein K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D JHX88_18650 helix-turn-helix domain-containing protein K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D JHX88_04255 DUF2083 domain-containing protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D JHX88_14300 DUF2083 domain-containing protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D JHX88_15995 helix-turn-helix transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D JHX88_12115 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D JHX88_04060 helix-turn-helix domain-containing protein K07724 ner; Ner family transcriptional regulator D JHX88_14670 helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D JHX88_17835 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D JHX88_19980 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D JHX88_09460 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D JHX88_15120 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D JHX88_12615 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D JHX88_04095 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JHX88_20840 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JHX88_20985 repB; plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JHX88_10135 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D JHX88_20870 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D JHX88_03015 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D JHX88_18035 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D JHX88_06635 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D JHX88_10315 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D JHX88_03935 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D JHX88_07030 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D JHX88_13665 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D JHX88_06140 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D JHX88_04385 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:psap03021] D JHX88_15440 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D JHX88_15620 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D JHX88_15615 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D JHX88_12410 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D JHX88_06125 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D JHX88_01855 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D JHX88_02850 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D JHX88_10350 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D JHX88_20775 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D JHX88_06325 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D JHX88_08145 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D JHX88_06185 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D JHX88_15645 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D JHX88_08240 fused response regulator/phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D JHX88_01600 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist D JHX88_01595 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D JHX88_07030 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D JHX88_13665 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D JHX88_05755 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D JHX88_20815 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:psap03019] D JHX88_08440 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D JHX88_05795 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D JHX88_12105 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D JHX88_14100 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D JHX88_12390 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D JHX88_17400 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D JHX88_19940 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D JHX88_08710 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JHX88_19020 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D JHX88_20815 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D JHX88_00840 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JHX88_13700 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JHX88_03165 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D JHX88_13715 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D JHX88_02750 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D JHX88_12275 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D JHX88_08220 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D JHX88_06765 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D JHX88_18730 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D JHX88_12925 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:psap03011] D JHX88_08690 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D JHX88_04735 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D JHX88_15540 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D JHX88_04290 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D JHX88_15485 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D JHX88_07075 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D JHX88_15590 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D JHX88_15500 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D JHX88_18295 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D JHX88_15575 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D JHX88_15445 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D JHX88_15595 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D JHX88_15450 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D JHX88_15505 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D JHX88_19025 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D JHX88_05585 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D JHX88_15525 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D JHX88_07070 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D JHX88_15550 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D JHX88_20975 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D JHX88_00055 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D JHX88_15635 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D JHX88_15555 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D JHX88_15570 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D JHX88_15565 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D JHX88_15510 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D JHX88_15495 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D JHX88_07065 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D JHX88_15630 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D JHX88_15640 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D JHX88_15625 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D JHX88_18300 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D JHX88_15520 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D JHX88_15465 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D JHX88_15535 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D JHX88_15435 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D JHX88_15490 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D JHX88_05565 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D JHX88_01740 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D JHX88_13310 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D JHX88_15545 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D JHX88_15560 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D JHX88_15515 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D JHX88_13305 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D JHX88_16475 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D JHX88_15530 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D JHX88_15480 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D JHX88_05560 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D JHX88_12500 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D JHX88_09890 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D JHX88_02515 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D JHX88_01745 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D JHX88_19035 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D JHX88_06095 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D JHX88_19895 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHX88_18270 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHX88_18290 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHX88_19915 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHX88_18275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHX88_19900 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:psap03009] D JHX88_05795 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D JHX88_05800 era; GTPase Era K03595 era; GTPase D JHX88_08730 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D JHX88_07030 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D JHX88_13665 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D JHX88_08145 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D JHX88_06185 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D JHX88_15645 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D JHX88_07100 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D JHX88_02910 RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D JHX88_05010 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D JHX88_07690 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D JHX88_07265 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D JHX88_01235 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D JHX88_20830 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D JHX88_04390 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D JHX88_18530 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D JHX88_02705 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D JHX88_04575 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D JHX88_06745 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D JHX88_10255 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D JHX88_04370 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D JHX88_20150 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D JHX88_08210 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D JHX88_09770 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D JHX88_17675 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D JHX88_15415 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D JHX88_06330 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D JHX88_16415 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D JHX88_16605 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D JHX88_05580 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D JHX88_01415 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D JHX88_01370 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D JHX88_08440 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D JHX88_19170 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D JHX88_17400 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D JHX88_19110 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D JHX88_03170 hflX; GTPase HflX K03665 hflX; GTPase D JHX88_17385 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D JHX88_12415 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D JHX88_01155 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D JHX88_08150 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D JHX88_06740 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D JHX88_05910 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D JHX88_03890 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D JHX88_13185 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:psap03016] D JHX88_04000 ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D JHX88_12650 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHX88_19190 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHX88_13735 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D JHX88_17390 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D JHX88_00085 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JHX88_07175 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D JHX88_12585 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JHX88_17010 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JHX88_05030 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D JHX88_14885 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D JHX88_19105 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D JHX88_05140 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D JHX88_02555 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D JHX88_11790 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D JHX88_01725 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D JHX88_01765 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D JHX88_06360 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JHX88_18555 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JHX88_17270 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D JHX88_12725 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D JHX88_12100 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D JHX88_16395 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D JHX88_01165 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D JHX88_18505 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JHX88_17385 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D JHX88_04585 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D JHX88_20820 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D JHX88_20825 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D JHX88_08700 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D JHX88_20125 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D JHX88_02510 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D JHX88_09895 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D JHX88_20865 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D JHX88_03865 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D JHX88_04660 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D JHX88_15210 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D JHX88_04540 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D JHX88_04530 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D JHX88_06085 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D JHX88_17670 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D JHX88_09900 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D JHX88_12705 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D JHX88_06630 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D JHX88_09330 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D JHX88_06090 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D JHX88_05570 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D JHX88_09770 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D JHX88_06045 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D JHX88_02500 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D JHX88_00530 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D JHX88_04650 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D JHX88_08090 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D JHX88_14180 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D JHX88_20020 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D JHX88_20015 6-pyruvoyl tetrahydropterin synthase family protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D JHX88_20010 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D JHX88_07150 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D JHX88_17140 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D JHX88_16450 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D JHX88_04640 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D JHX88_06855 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D JHX88_16410 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D JHX88_16355 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D JHX88_14100 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D JHX88_19020 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:psap03012] D JHX88_08135 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D JHX88_09275 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D JHX88_10065 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D JHX88_04740 elongation factor Ts K02357 tsf; elongation factor Ts D JHX88_15580 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JHX88_15680 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JHX88_15585 fusA; elongation factor G K02355 fusA; elongation factor G D JHX88_07080 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D JHX88_04595 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D JHX88_07085 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D JHX88_13130 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D JHX88_14275 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D JHX88_15705 efp; elongation factor P K02356 efp; elongation factor P D JHX88_13025 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D JHX88_04155 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D JHX88_14050 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:psap03110] D JHX88_07730 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D JHX88_16505 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D JHX88_17950 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D JHX88_13120 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D JHX88_01100 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D JHX88_00840 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JHX88_14700 Hsp70 family protein K04046 yegD; hypothetical chaperone protein D JHX88_13700 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JHX88_00835 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D JHX88_13215 molecular chaperone DjiA K05801 djlA; DnaJ like chaperone protein D JHX88_08230 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D JHX88_20875 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D JHX88_04820 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA D JHX88_10145 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D JHX88_13695 co-chaperone GroES K04078 groES; chaperonin GroES D JHX88_04710 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D JHX88_06850 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D JHX88_12970 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D JHX88_00140 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D JHX88_08895 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D JHX88_16460 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D JHX88_09685 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D JHX88_08120 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D JHX88_07110 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D JHX88_01120 trxA; thioredoxin K03671 TXN; thioredoxin D JHX88_20745 co-chaperone YbbN K05838 ybbN; putative thioredoxin D JHX88_08175 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D JHX88_08835 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D JHX88_08395 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:psap04131] D JHX88_12755 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D JHX88_04340 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JHX88_01755 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHX88_19955 MFS transporter K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:psap03032] D JHX88_12770 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D JHX88_02100 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D JHX88_12535 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D JHX88_13175 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D JHX88_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D JHX88_04265 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D JHX88_06120 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D JHX88_20990 replication initiation protein RepC K18996 repC; replication initiation protein RepC D JHX88_13355 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHX88_22005 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHX88_06785 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JHX88_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JHX88_07135 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JHX88_00075 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JHX88_07855 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JHX88_13225 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHX88_20795 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHX88_04840 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JHX88_16675 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D JHX88_12710 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JHX88_06060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D JHX88_16195 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D JHX88_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D JHX88_18655 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D JHX88_12250 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D JHX88_16665 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:psap03036] D JHX88_05795 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D JHX88_00150 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D JHX88_02100 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D JHX88_12535 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D JHX88_13175 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D JHX88_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D JHX88_01590 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D JHX88_03165 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D JHX88_04500 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D JHX88_01500 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D JHX88_03980 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D JHX88_10790 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D JHX88_15115 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D JHX88_21845 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D JHX88_08275 AAA family ATPase K03529 smc; chromosome segregation protein D JHX88_12570 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D JHX88_12565 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D JHX88_13885 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D JHX88_18835 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D JHX88_04400 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D JHX88_02930 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D JHX88_13890 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D JHX88_13935 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D JHX88_18830 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D JHX88_13880 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D JHX88_04795 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA D JHX88_01470 AFG1 family ATPase K06916 zapE; cell division protein ZapE D JHX88_13015 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JHX88_08660 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_09185 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_11280 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_12450 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D JHX88_12445 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D JHX88_12440 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D JHX88_12430 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D JHX88_05650 AAA family ATPase K03496 parA; chromosome partitioning protein D JHX88_12360 ParA family protein K03496 parA; chromosome partitioning protein D JHX88_20835 ParA family protein K03496 parA; chromosome partitioning protein D JHX88_20980 repA; plasmid partitioning protein RepA K03496 parA; chromosome partitioning protein D JHX88_04095 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JHX88_20840 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JHX88_20985 repB; plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JHX88_18655 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D JHX88_12250 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D JHX88_20825 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D JHX88_20830 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D JHX88_06090 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D JHX88_01280 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D JHX88_13385 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D JHX88_00470 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D JHX88_04380 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D JHX88_21940 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D JHX88_02480 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:psap03400] D JHX88_09710 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D JHX88_20660 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D JHX88_01655 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D JHX88_06015 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D JHX88_08130 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D JHX88_08235 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D JHX88_16495 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D JHX88_09270 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D JHX88_16485 bifunctional transcriptional activator/DNA repair protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D JHX88_03925 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D JHX88_14075 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D JHX88_18870 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D JHX88_00845 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D JHX88_07995 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D JHX88_20720 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D JHX88_12625 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JHX88_06060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D JHX88_12710 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JHX88_11805 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D JHX88_18460 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D JHX88_03305 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D JHX88_06610 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JHX88_13260 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JHX88_15620 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D JHX88_15615 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D JHX88_15440 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D JHX88_12410 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D JHX88_07715 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D JHX88_00800 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D JHX88_09755 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D JHX88_08655 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D JHX88_06645 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D JHX88_06785 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JHX88_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JHX88_07135 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JHX88_00075 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JHX88_07855 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JHX88_13225 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHX88_20795 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHX88_04840 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JHX88_13355 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHX88_22005 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHX88_05025 recA; recombinase RecA K03553 recA; recombination protein RecA D JHX88_06825 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D JHX88_06830 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D JHX88_06820 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D JHX88_01295 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D JHX88_04140 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D JHX88_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D JHX88_06065 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D JHX88_05820 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D JHX88_04830 recR; recombination protein RecR K06187 recR; recombination protein RecR D JHX88_13865 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D JHX88_01125 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D JHX88_07905 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D JHX88_16195 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D JHX88_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D JHX88_16665 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D JHX88_02100 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D JHX88_12535 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D JHX88_13175 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D JHX88_19940 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D JHX88_00150 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D JHX88_08095 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D JHX88_14020 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D JHX88_01650 hypothetical protein K14160 imuA; protein ImuA D JHX88_01645 DNA polymerase Y family protein K14161 imuB; protein ImuB D JHX88_01640 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D JHX88_06415 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JHX88_14135 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JHX88_18080 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JHX88_18085 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:psap03029] D JHX88_00820 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D JHX88_08135 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D JHX88_09275 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D JHX88_04740 elongation factor Ts K02357 tsf; elongation factor Ts D JHX88_15580 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JHX88_15680 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JHX88_15585 fusA; elongation factor G K02355 fusA; elongation factor G D JHX88_10150 disulfide oxidoreductase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D JHX88_05800 era; GTPase Era K03595 era; GTPase D JHX88_06360 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JHX88_00085 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JHX88_17010 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JHX88_12585 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JHX88_02920 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D JHX88_03240 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D JHX88_10280 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D JHX88_05045 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D JHX88_10285 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D JHX88_13355 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHX88_22005 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHX88_04620 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D JHX88_00840 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JHX88_20875 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D JHX88_13700 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JHX88_13695 co-chaperone GroES K04078 groES; chaperonin GroES D JHX88_00835 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D JHX88_18505 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JHX88_08835 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D JHX88_00470 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D JHX88_04380 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D JHX88_16640 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D JHX88_16630 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D JHX88_09325 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D JHX88_02490 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JHX88_03535 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D JHX88_16620 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D JHX88_00160 SCO family protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:psap02000] D JHX88_08085 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D JHX88_15660 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D JHX88_01465 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D JHX88_08215 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D JHX88_16025 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D JHX88_08110 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D JHX88_21660 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D JHX88_13315 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D JHX88_08685 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D JHX88_08680 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D JHX88_08675 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D JHX88_14340 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein D JHX88_20235 ABC transporter permease K05773 tupB; tungstate transport system permease protein D JHX88_20230 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D JHX88_04920 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JHX88_09625 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JHX88_13325 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JHX88_17060 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JHX88_04915 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JHX88_05890 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JHX88_17055 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JHX88_04925 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JHX88_17050 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JHX88_20580 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JHX88_00795 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D JHX88_00790 thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein D JHX88_00785 ATP-binding cassette domain-containing protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D JHX88_12290 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D JHX88_05160 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D JHX88_05155 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D JHX88_05165 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D JHX88_06935 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D JHX88_06940 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D JHX88_10630 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D JHX88_19745 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D JHX88_20490 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D JHX88_06950 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D JHX88_10620 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D JHX88_19760 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D JHX88_06945 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D JHX88_10625 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D JHX88_19755 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D JHX88_06930 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D JHX88_10635 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D JHX88_19750 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D JHX88_13060 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D JHX88_18695 choX; choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D JHX88_20680 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D JHX88_13065 choW; choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D JHX88_20685 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D JHX88_13070 choV; choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D JHX88_20690 betaine/proline/choline family ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D JHX88_00310 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D JHX88_16760 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D JHX88_00315 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JHX88_00330 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JHX88_16765 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JHX88_16775 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JHX88_00320 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D JHX88_16770 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D JHX88_02025 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D JHX88_12355 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D JHX88_02030 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D JHX88_12345 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D JHX88_12350 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D JHX88_14650 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D JHX88_14660 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D JHX88_14655 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D JHX88_02035 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D JHX88_12340 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D JHX88_07875 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_14480 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_15195 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_19400 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_21590 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_05415 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_07375 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_15875 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_17575 carbohydrate ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D JHX88_17580 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D JHX88_17585 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D JHX88_00900 carbohydrate ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein D JHX88_00905 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein D JHX88_00910 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein D JHX88_00920 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10235 aglK; alpha-glucoside transport system ATP-binding protein D JHX88_17605 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10235 aglK; alpha-glucoside transport system ATP-binding protein D JHX88_05430 carbohydrate ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D JHX88_05425 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D JHX88_05420 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D JHX88_04985 sugar ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D JHX88_04995 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D JHX88_04990 sugar ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D JHX88_03645 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D JHX88_03655 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D JHX88_03650 sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_00610 sugar ABC transporter substrate-binding protein K10552 frcB; fructose transport system substrate-binding protein D JHX88_00615 ABC transporter permease K10553 frcC; fructose transport system permease protein D JHX88_00620 sugar ABC transporter ATP-binding protein K10554 frcA; fructose transport system ATP-binding protein D JHX88_15825 rhaS; rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D JHX88_15835 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein D JHX88_15840 ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein D JHX88_15830 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D JHX88_04210 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D JHX88_20180 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D JHX88_04205 ABC transporter permease K10440 rbsC; ribose transport system permease protein D JHX88_20185 ABC transporter permease K10440 rbsC; ribose transport system permease protein D JHX88_04200 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D JHX88_20190 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D JHX88_03680 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D JHX88_03690 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D JHX88_03695 yjfF; sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein D JHX88_03685 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D JHX88_15340 D-ribose ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D JHX88_17180 D-ribose ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D JHX88_15325 ABC transporter permease K17203 eryF; erythritol transport system permease protein D JHX88_17185 ABC transporter permease K17203 eryF; erythritol transport system permease protein D JHX88_15330 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D JHX88_17190 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D JHX88_11035 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein D JHX88_11050 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein D JHX88_11045 ABC transporter permease K17214 K17214; inositol transport system permease protein D JHX88_11040 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein D JHX88_00770 carbohydrate ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D JHX88_00755 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein D JHX88_00760 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein D JHX88_00745 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D JHX88_00750 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D JHX88_02830 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D JHX88_02825 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D JHX88_02820 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D JHX88_02815 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D JHX88_07890 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D JHX88_07885 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D JHX88_07880 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein D JHX88_03410 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D JHX88_16420 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D JHX88_03420 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D JHX88_16430 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D JHX88_03415 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D JHX88_16440 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D JHX88_03425 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D JHX88_16425 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D JHX88_07390 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D JHX88_14500 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D JHX88_15190 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D JHX88_15900 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D JHX88_19415 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D JHX88_21595 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D JHX88_07395 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D JHX88_14495 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D JHX88_15185 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D JHX88_15895 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D JHX88_19410 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D JHX88_21605 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D JHX88_07400 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D JHX88_14490 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D JHX88_15180 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D JHX88_15890 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D JHX88_19405 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D JHX88_21600 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D JHX88_17360 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D JHX88_17355 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D JHX88_17350 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHX88_08930 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D JHX88_08975 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D JHX88_15085 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D JHX88_08980 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D JHX88_15080 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D JHX88_08985 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D JHX88_15075 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D JHX88_08990 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D JHX88_15070 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D JHX88_02170 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D JHX88_09060 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D JHX88_17085 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D JHX88_02175 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D JHX88_02180 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D JHX88_09045 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D JHX88_09050 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D JHX88_17070 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D JHX88_17075 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D JHX88_02165 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D JHX88_09055 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D JHX88_17080 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D JHX88_15090 transporter substrate-binding domain-containing protein K10036 glnH; glutamine transport system substrate-binding protein D JHX88_15095 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein D JHX88_15100 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D JHX88_10440 transporter substrate-binding domain-containing protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D JHX88_10830 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D JHX88_15400 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D JHX88_10445 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein D JHX88_10825 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein D JHX88_15395 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein D JHX88_10450 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D JHX88_10820 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D JHX88_15390 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D JHX88_10455 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D JHX88_10815 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D JHX88_15385 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D JHX88_10055 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHX88_13745 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHX88_18955 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHX88_20410 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHX88_10050 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHX88_13760 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHX88_18965 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHX88_10045 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D JHX88_13765 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D JHX88_18960 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D JHX88_10040 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHX88_13750 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHX88_18970 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHX88_10035 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHX88_13755 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHX88_18950 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHX88_02050 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein D JHX88_02045 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein D JHX88_02040 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein D JHX88_01070 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D JHX88_05450 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D JHX88_07350 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D JHX88_13825 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D JHX88_17555 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D JHX88_01075 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D JHX88_01080 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D JHX88_05460 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D JHX88_05465 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D JHX88_07340 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D JHX88_07345 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D JHX88_13810 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D JHX88_17550 amino acid ABC transporter permease/ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D JHX88_01065 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D JHX88_05455 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D JHX88_06235 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D JHX88_07355 ATP-binding cassette domain-containing protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D JHX88_04870 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D JHX88_04865 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D JHX88_04860 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D JHX88_03200 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D JHX88_04855 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D JHX88_04850 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D JHX88_11515 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D JHX88_16900 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D JHX88_16910 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein D JHX88_16915 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein D JHX88_16920 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D JHX88_16925 dipeptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D JHX88_00575 glutathione ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D JHX88_00570 gsiC; glutathione ABC transporter permease GsiC K13890 gsiC; glutathione transport system permease protein D JHX88_00565 ABC transporter permease subunit K13891 gsiD; glutathione transport system permease protein D JHX88_00580 dipeptide ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D JHX88_00220 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_03185 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_03595 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_03780 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_04965 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_05280 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_05285 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_07615 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_08020 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_09720 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_10015 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_10020 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_12475 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_15950 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_16270 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_19220 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_19255 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_19460 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_19520 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_19835 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_20360 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JHX88_00225 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_03190 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_03395 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_03600 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_03785 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_04955 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_05275 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_07620 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_09725 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_10010 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_11510 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_15955 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_16265 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_19215 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_19270 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_19465 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_19525 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_19830 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_20355 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JHX88_00230 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_03195 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_03390 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_03605 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_03790 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_04950 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_05270 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_07625 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_09730 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_10005 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_11505 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_15960 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_16260 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_19210 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_19275 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_19470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_19530 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_19825 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_20350 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JHX88_00210 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_03385 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_03610 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_04945 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_05290 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_07630 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_09735 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_09990 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_11500 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_15965 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_16255 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_19205 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_19260 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_19475 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_19515 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_20340 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JHX88_00215 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_09740 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_09985 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_11495 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_19200 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_19265 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_20335 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D JHX88_05115 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D JHX88_05120 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D JHX88_05125 ABC transporter permease K13895 yejE; microcin C transport system permease protein D JHX88_05130 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D JHX88_16010 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D JHX88_16015 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D JHX88_16020 ATP-binding cassette domain-containing protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D JHX88_15785 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D JHX88_15780 iron ABC transporter permease K25133 hmuU; heme transport system permease protein D JHX88_15775 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D JHX88_19310 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D JHX88_11250 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D JHX88_19315 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D JHX88_19320 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D JHX88_11260 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D JHX88_19325 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D JHX88_11265 ABC transporter substrate-binding protein K25109 sirA; iron-siderophore transport system substrate-binding protein D JHX88_11255 iron ABC transporter permease K25111 sirC; iron-siderophore transport system permease protein D JHX88_01875 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D JHX88_01885 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein D JHX88_01880 iron chelate uptake ABC transporter family permease subunit K25284 yclN; iron-siderophore transport system permease protein D JHX88_01890 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D JHX88_01580 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D JHX88_18090 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D JHX88_01575 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D JHX88_18095 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D JHX88_01570 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D JHX88_18100 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D JHX88_17685 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D JHX88_20145 metal-binding protein ZinT K09815 znuA; zinc transport system substrate-binding protein D JHX88_17700 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D JHX88_17695 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D JHX88_20060 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D JHX88_20050 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein D JHX88_20045 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein D JHX88_20055 manganese/iron ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein D JHX88_13990 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D JHX88_13995 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein D JHX88_14000 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D JHX88_21745 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D JHX88_18365 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D JHX88_21740 sugar transporter K10107 kpsE; capsular polysaccharide transport system permease protein D JHX88_18360 ATP-binding cassette domain-containing protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D JHX88_21735 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D JHX88_07125 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D JHX88_07120 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D JHX88_03885 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D JHX88_04135 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D JHX88_04130 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D JHX88_08385 heme ABC transporter permease K02195 ccmC; heme exporter protein C D JHX88_08380 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D JHX88_08375 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D JHX88_18830 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D JHX88_18835 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D JHX88_01400 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D JHX88_18770 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D JHX88_20960 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D JHX88_01395 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JHX88_12720 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JHX88_20955 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JHX88_08900 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D JHX88_08905 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D JHX88_18490 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D JHX88_08920 Na/Pi cotransporter family protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D JHX88_02540 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D JHX88_01045 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D JHX88_15025 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D JHX88_09040 arsJ; organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D JHX88_18640 arsJ; organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D JHX88_21260 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D JHX88_04260 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D JHX88_04345 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D JHX88_09410 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D JHX88_04810 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D JHX88_17750 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D JHX88_16690 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D JHX88_19955 MFS transporter K06902 UMF1; MFS transporter, UMF1 family D JHX88_20725 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D JHX88_01910 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D JHX88_18720 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D JHX88_18725 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D JHX88_03895 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D JHX88_07170 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z D JHX88_18910 ammonium transporter K03320 amt; ammonium transporter, Amt family D JHX88_20370 ammonium transporter K03320 amt; ammonium transporter, Amt family D JHX88_00050 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_01015 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_02575 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_02585 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_06285 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_10800 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_10805 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_12235 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_12605 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_12780 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_17135 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_17800 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_19245 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_19680 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHX88_03835 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D JHX88_03840 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D JHX88_03845 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D JHX88_03970 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D JHX88_04475 mechanosensitive ion channel family protein K05802 mscK; potassium-dependent mechanosensitive channel D JHX88_14145 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D JHX88_06695 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D JHX88_04315 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D JHX88_18940 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D JHX88_02405 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D JHX88_17290 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D JHX88_17285 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D JHX88_06885 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D JHX88_02400 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR D JHX88_06880 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D JHX88_17280 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR D JHX88_02785 magnesium transporter CorA family protein K03284 corA; magnesium transporter D JHX88_15420 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D JHX88_03765 merF; mercury resistance system transport protein MerF K19058 merC; mercuric ion transport protein D JHX88_10560 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHX88_13390 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHX88_18065 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHX88_00095 porin K08720 ompU; outer membrane protein OmpU D JHX88_00030 porin family protein K16079 omp31; outer membrane immunogenic protein D JHX88_21465 porin family protein K16079 omp31; outer membrane immunogenic protein D JHX88_01245 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D JHX88_12255 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D JHX88_07440 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D JHX88_00860 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D JHX88_15795 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D JHX88_11245 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D JHX88_16005 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D JHX88_19330 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D JHX88_01940 TolC family outer membrane protein K12340 tolC; outer membrane protein D JHX88_11270 efflux transporter outer membrane subunit K18904 nodT; outer membrane protein, multidrug efflux system D JHX88_06155 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D JHX88_04620 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D JHX88_13870 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D JHX88_00180 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA D JHX88_00175 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB D JHX88_03880 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D JHX88_03875 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D JHX88_07115 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D JHX88_00080 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D JHX88_05915 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein D JHX88_20260 APC family permease K16238 eat; ethanolamine permease D JHX88_08665 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_09180 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_11275 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_17245 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_16545 efflux RND transporter permease subunit K21134 triC; multidrug efflux pump D JHX88_04320 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump D JHX88_15720 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D JHX88_05810 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D JHX88_08010 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D JHX88_00325 BCCT family transporter K05020 opuD; glycine betaine transporter D JHX88_01735 calcium:proton antiporter K07300 chaA; Ca2+:H+ antiporter D JHX88_03295 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D JHX88_13245 cation acetate symporter K14393 actP; cation/acetate symporter D JHX88_14200 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D JHX88_18585 cation:proton antiporter K03316 nhaP; Na+:H+ antiporter D JHX88_13685 cation:proton antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D JHX88_03160 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D JHX88_04550 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D JHX88_04775 Ktr system potassium transporter B K03498 trkH; trk/ktr system potassium uptake protein D JHX88_10360 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D JHX88_03155 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D JHX88_04780 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D JHX88_05860 purine permease K24206 uacT; uric acid transporter D JHX88_06215 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D JHX88_17040 chloride channel protein K03281 clcA; chloride channel protein, CIC family D JHX88_20495 chloride channel protein K03281 clcA; chloride channel protein, CIC family D JHX88_13945 chrA; chromate efflux transporter K07240 chrA; chromate transporter D JHX88_04935 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D JHX88_02560 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP D JHX88_09850 dctP; TRAP transporter substrate-binding protein DctP K11688 dctP; C4-dicarboxylate-binding protein DctP D JHX88_02565 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D JHX88_03230 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_06500 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_11590 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_14595 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_02570 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_09840 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_13290 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D JHX88_00420 TRAP transporter large permease K21393 yiaN; TRAP-type transport system large permease protein D JHX88_14535 TRAP transporter small permease subunit K21394 yiaM; TRAP-type transport system small permease protein D JHX88_16860 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein D JHX88_00425 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein D JHX88_07200 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D JHX88_13280 DctP family TRAP transporter solute-binding subunit K21395 yiaO; TRAP-type transport system periplasmic protein D JHX88_13805 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D JHX88_14540 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein D JHX88_05515 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D JHX88_01670 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter D JHX88_06815 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A D JHX88_06810 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D JHX88_06805 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D JHX88_06800 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D JHX88_06795 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D JHX88_06790 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G D JHX88_18545 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D JHX88_05510 AEC family transporter K13936 mdcF; malonate transporter and related proteins D JHX88_07840 AEC family transporter K13936 mdcF; malonate transporter and related proteins D JHX88_10290 AEC family transporter K13936 mdcF; malonate transporter and related proteins D JHX88_04505 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D JHX88_16435 LysE family translocator K05835 rhtC; threonine efflux protein D JHX88_05740 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D JHX88_05735 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D JHX88_01780 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_00245 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_00445 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_00695 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_09650 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_10890 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_11300 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_11390 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_11455 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_16315 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D JHX88_00250 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D JHX88_00700 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D JHX88_09645 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D JHX88_10895 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D JHX88_11305 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D JHX88_09640 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D JHX88_16325 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D JHX88_11385 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D JHX88_00435 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D JHX88_00705 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D JHX88_19970 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D JHX88_09805 VIT1/CCC1 transporter family protein K22737 mbfA; erythrin-vacuolar iron transport family protein D JHX88_07060 MarC family protein K05595 marC; multiple antibiotic resistance protein D JHX88_13935 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D JHX88_12225 hypothetical protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein D JHX88_06865 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D JHX88_06870 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein D JHX88_08445 sulfite exporter TauE/SafE family protein K06196 ccdA; cytochrome c-type biogenesis protein D JHX88_09430 sulfite exporter TauE/SafE family protein K06196 ccdA; cytochrome c-type biogenesis protein D JHX88_09010 arsenate reductase (azurin) small subunit K08355 aoxA; arsenite oxidase small subunit [EC:1.20.2.1 1.20.9.1] D JHX88_09005 arsenate reductase (azurin) large subunit K08356 aoxB; arsenite oxidase large subunit [EC:1.20.2.1 1.20.9.1] D JHX88_08105 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D JHX88_21655 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D JHX88_08660 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_09185 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_11280 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_16555 efflux RND transporter periplasmic adaptor subunit K21136 triA; membrane fusion protein, multidrug efflux system D JHX88_16550 efflux RND transporter periplasmic adaptor subunit K21137 triB; membrane fusion protein, multidrug efflux system D JHX88_09520 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D JHX88_05875 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] C 02044 Secretion system [BR:psap02044] D JHX88_01940 TolC family outer membrane protein K12340 tolC; outer membrane protein D JHX88_08110 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D JHX88_21660 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D JHX88_08105 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D JHX88_21655 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D JHX88_19945 YggT family protein K02221 yggT; YggT family protein D JHX88_12655 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC D JHX88_06705 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D JHX88_06715 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D JHX88_06675 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D JHX88_16710 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D JHX88_06665 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D JHX88_06660 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D JHX88_16730 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D JHX88_06710 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D JHX88_21950 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D JHX88_21930 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D JHX88_21925 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC D JHX88_21920 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD D JHX88_21915 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D JHX88_21895 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D JHX88_21885 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D JHX88_21880 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI D JHX88_21910 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D JHX88_21900 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D JHX88_02450 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D JHX88_02445 tssL; type VI secretion system protein TssL, long form K11892 impK; type VI secretion system protein ImpK D JHX88_02440 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ D JHX88_02380 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH D JHX88_02375 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG D JHX88_02370 GPW/gp25 family protein K11897 impF; type VI secretion system protein ImpF D JHX88_02360 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC D JHX88_02355 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB D JHX88_02350 type VI secretion system ImpA family N-terminal domain-containing protein K11902 impA; type VI secretion system protein ImpA D JHX88_02365 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D JHX88_18010 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D JHX88_05985 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D JHX88_14215 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D JHX88_14765 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D JHX88_18030 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D JHX88_02385 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D JHX88_02455 tagF; type VI secretion system-associated protein TagF K11890 impM; type VI secretion system protein ImpM D JHX88_02345 tagH; type VI secretion system-associated FHA domain protein TagH K11894 impI; type VI secretion system protein ImpI D JHX88_08115 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JHX88_00140 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D JHX88_08360 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D JHX88_15650 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JHX88_08365 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D JHX88_12795 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D JHX88_15460 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JHX88_05610 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D JHX88_10230 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D JHX88_08355 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D JHX88_02490 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JHX88_14320 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D JHX88_14315 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D JHX88_14310 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:psap02042] D JHX88_10560 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHX88_13390 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHX88_18065 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHX88_04730 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:psap02022] D JHX88_04685 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D JHX88_09000 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D JHX88_15060 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D JHX88_08555 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D JHX88_03920 response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D JHX88_10385 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D JHX88_10390 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D JHX88_09630 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D JHX88_08065 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D JHX88_09635 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D JHX88_18195 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D JHX88_09790 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D JHX88_03125 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D JHX88_03130 sigma-54-dependent Fis family transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D JHX88_03135 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D JHX88_03140 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D JHX88_09015 sigma-54-dependent Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D JHX88_04520 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D JHX88_17475 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D JHX88_17470 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D JHX88_09020 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D JHX88_17915 cache domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D JHX88_20220 cache domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D JHX88_05015 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D JHX88_06055 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D JHX88_07420 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D JHX88_07425 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D JHX88_00165 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D JHX88_00155 ActR/PrrA/RegA family redox response regulator transcription factor K15012 regA; two-component system, response regulator RegA C 02035 Bacterial motility proteins [BR:psap02035] D JHX88_16710 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D JHX88_06660 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D JHX88_16730 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D JHX88_06710 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D JHX88_06705 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D JHX88_06715 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D JHX88_04330 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D JHX88_14280 FliM/FliN family flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D JHX88_06665 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D JHX88_06675 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D JHX88_18920 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D JHX88_16745 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D JHX88_16750 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D JHX88_06680 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D JHX88_16755 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D JHX88_16725 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D JHX88_02325 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D JHX88_16715 FlgB family protein K02387 flgB; flagellar basal-body rod protein FlgB D JHX88_16720 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D JHX88_02320 flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D JHX88_16735 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF D JHX88_16740 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D JHX88_18935 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D JHX88_18930 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D JHX88_18925 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D JHX88_20715 flagellin K02406 fliC; flagellin D JHX88_06695 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D JHX88_04315 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D JHX88_18940 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D JHX88_20710 flaF; flagellar biosynthesis regulator FlaF K06602 flaF; flagellar biosynthesis activator protein FlaF D JHX88_20705 flbT; flagellar biosynthesis repressor FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:psap04812] D JHX88_12450 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D JHX88_13880 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D JHX88_13885 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D JHX88_05650 AAA family ATPase K03496 parA; chromosome partitioning protein D JHX88_12360 ParA family protein K03496 parA; chromosome partitioning protein D JHX88_20835 ParA family protein K03496 parA; chromosome partitioning protein D JHX88_20980 repA; plasmid partitioning protein RepA K03496 parA; chromosome partitioning protein D JHX88_04095 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JHX88_20840 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JHX88_20985 repB; plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:psap04147] D JHX88_08710 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JHX88_04340 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JHX88_13615 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JHX88_01755 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHX88_12370 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D JHX88_13700 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JHX88_00840 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JHX88_10235 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JHX88_04195 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D JHX88_11425 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D JHX88_12260 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D JHX88_15580 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JHX88_15680 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JHX88_12725 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D JHX88_18975 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D JHX88_08920 Na/Pi cotransporter family protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D JHX88_01010 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_01605 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13275 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_13980 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_14960 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_18880 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_19975 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHX88_08490 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D JHX88_16160 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D JHX88_15455 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D JHX88_04465 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D JHX88_17455 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JHX88_18860 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JHX88_08255 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D JHX88_07330 dimethylarginine dimethylaminohydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18] D JHX88_05490 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D JHX88_12335 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D JHX88_07040 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D JHX88_17225 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D JHX88_16820 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D JHX88_00775 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D JHX88_01085 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_02725 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_15920 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_18635 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_19725 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHX88_07705 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D JHX88_10090 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D JHX88_01510 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D JHX88_08915 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D JHX88_01560 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D JHX88_02905 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D JHX88_10845 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_13600 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_14170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHX88_18685 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit D JHX88_05710 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D JHX88_10245 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D JHX88_04655 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:psap02048] D JHX88_04035 hsdR; type I restriction-modification system endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D JHX88_04025 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D JHX88_04030 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D JHX88_16670 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72] D JHX88_08570 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D JHX88_04040 calmodulin-binding protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D JHX88_22130 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D JHX88_12240 hypothetical protein K18923 stbD; antitoxin StbD D JHX88_21335 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D JHX88_14665 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D JHX88_14670 helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D JHX88_21330 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family K19092 parE1_3_4; toxin ParE1/3/4 D JHX88_22020 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D JHX88_12245 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein D JHX88_13880 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D JHX88_12450 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D JHX88_18655 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D JHX88_12250 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D JHX88_12650 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHX88_19190 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHX88_08040 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D JHX88_18505 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:psap01504] D JHX88_14695 acetyltransferase K00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82] D JHX88_18760 GNAT family N-acetyltransferase K00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82] D JHX88_06905 phosphotransferase K17880 hyg; hygromycin-B 7''-O-kinase [EC:2.7.1.119] D JHX88_15665 CatB-related O-acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D JHX88_19990 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D JHX88_08660 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_09185 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_11280 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHX88_08665 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_09180 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_11275 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_17245 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHX88_03760 helix-turn-helix domain-containing protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D JHX88_21235 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D JHX88_01940 TolC family outer membrane protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:psap00537] D JHX88_08915 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D JHX88_12370 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:psap03100] D JHX88_09380 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHX88_18280 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHX88_02960 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHX88_19905 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHX88_19365 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHX88_03635 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHX88_02525 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHX88_07600 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHX88_08565 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D JHX88_06375 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JHX88_06370 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JHX88_01930 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D JHX88_18380 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D JHX88_10295 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JHX88_17660 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHX88_11815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHX88_16070 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHX88_08750 tRNA-His K14226 tRNA-His; tRNA His D JHX88_18285 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHX88_19910 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHX88_17100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHX88_07160 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHX88_10030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHX88_05410 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHX88_10180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHX88_06620 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D JHX88_18265 tRNA-Met K14230 tRNA-Met; tRNA Met D JHX88_19225 tRNA-Met K14230 tRNA-Met; tRNA Met D JHX88_09355 tRNA-Ile K14230 tRNA-Met; tRNA Met D JHX88_19890 tRNA-Met K14230 tRNA-Met; tRNA Met D JHX88_14255 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D JHX88_04015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JHX88_05200 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JHX88_12545 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JHX88_13395 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHX88_04495 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHX88_06030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHX88_14855 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHX88_05895 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHX88_16335 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHX88_05990 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHX88_15655 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D JHX88_02700 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D JHX88_08530 tRNA-Val K14237 tRNA-Val; tRNA Val D JHX88_08545 tRNA-Val K14237 tRNA-Val; tRNA Val D JHX88_19040 tRNA-Val K14237 tRNA-Val; tRNA Val D JHX88_18290 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHX88_19915 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHX88_18275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHX88_19900 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHX88_19895 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHX88_18270 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHX88_05095 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D JHX88_09895 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D JHX88_13770 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D JHX88_10970 glucose 1-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D JHX88_11540 SDR family oxidoreductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D JHX88_16035 SDR family oxidoreductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D JHX88_07305 carnitine 3-dehydrogenase K27497 K27497; carnitine 3-dehydrogenase / betainyl-CoA thioesterase [EC:1.1.1.108 3.1.2.33] D JHX88_04960 carnitine 3-dehydrogenase K27497 K27497; carnitine 3-dehydrogenase / betainyl-CoA thioesterase [EC:1.1.1.108 3.1.2.33] D JHX88_11525 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D JHX88_17165 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D JHX88_16570 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D JHX88_17205 glycerol-3-phosphate dehydrogenase K21054 eryB; D-erythritol 1-phosphate dehydrogenase [EC:1.1.1.402] D JHX88_15320 Gfo/Idh/MocA family oxidoreductase K23244 apsD; D-apiose dehydrogenase [EC:1.1.1.420] D JHX88_15300 NAD(P)-binding domain-containing protein K23245 apnO; D-apionate oxidoisomerase [EC:1.1.1.421] D JHX88_00405 aldo/keto reductase K26057 smoB; 6-dehydroglucose reductase [EC:1.1.1.432] D JHX88_01810 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D JHX88_09760 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D JHX88_19610 FAD-binding oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D JHX88_09035 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D JHX88_18645 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D JHX88_11100 aldehyde dehydrogenase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-] D JHX88_21225 indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D JHX88_21230 indolepyruvate oxidoreductase subunit beta family protein K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D JHX88_09545 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D JHX88_00880 pqqC; pyrroloquinoline-quinone synthase PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D JHX88_05325 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D JHX88_05330 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D JHX88_21150 NAD/NADP octopine/nopaline dehydrogenase family protein K04940 odh; opine dehydrogenase [EC:1.5.1.28] D JHX88_17540 FAD-binding oxidoreductase K25952 socD; fructosyl amine oxidase (glucosone-forming) [EC:1.5.3.25] D JHX88_15110 NADH:flavin oxidoreductase K22551 hpbA; N-methyl-L-proline demethylase [EC:1.5.3.-] D JHX88_05760 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D JHX88_00065 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D JHX88_18155 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D JHX88_11375 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D JHX88_11625 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D JHX88_14975 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D JHX88_05625 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D JHX88_17735 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D JHX88_16535 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D JHX88_16530 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D JHX88_02875 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D JHX88_03405 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D JHX88_19925 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D JHX88_10170 peroxiredoxin K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D JHX88_19000 redoxin domain-containing protein K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D JHX88_06845 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D JHX88_17975 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D JHX88_20380 DUF3445 domain-containing protein K22342 dmmA; dimethylamine monooxygenase subunit A [EC:1.14.13.238] D JHX88_20385 oxidoreductase K22343 dmmB; dimethylamine monooxygenase subunit B [EC:1.14.13.238] D JHX88_20390 hypothetical protein K22344 dmmC; dimethylamine monooxygenase subunit C [EC:1.14.13.238] D JHX88_07965 aromatic ring-hydroxylating dioxygenase subunit alpha K24003 stc2; stachydrine N-demethylase [EC:1.14.13.247] D JHX88_00400 LLM class flavin-dependent oxidoreductase K26058 smoC; sulfoquinovose monooxygenase [EC:1.14.14.181] D JHX88_11105 LLM class flavin-dependent oxidoreductase K23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-] D JHX88_07835 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D JHX88_07805 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D JHX88_00870 pqqE; pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D JHX88_01935 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D JHX88_01955 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D JHX88_10340 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D JHX88_21010 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D JHX88_12555 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D JHX88_20475 hypothetical protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D JHX88_12600 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D JHX88_06410 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D JHX88_13180 GNAT family N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D JHX88_07295 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K14660 nodE; nodulation protein E [EC:2.3.1.-] D JHX88_13210 N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D JHX88_13105 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D JHX88_16950 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D JHX88_00655 larB; nickel pincer cofactor biosynthesis protein LarB K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D JHX88_06345 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D JHX88_17200 carbohydrate kinase K00862 eryA; erythritol kinase (D-erythritol 1-phosphate-forming) [EC:2.7.1.215] D JHX88_17595 fructoselysine 6-kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218] D JHX88_15305 four-carbon acid sugar kinase family protein K23247 oiaK; 3-oxoisoapionate kinase [EC:2.7.1.231] D JHX88_16945 glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D JHX88_08720 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D JHX88_19390 frc; formyl-CoA transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16] D JHX88_11295 CoA transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D JHX88_06275 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D JHX88_15315 hypothetical protein K23246 apnL; D-apionolactonase [EC:3.1.1.115] D JHX88_07435 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D JHX88_06895 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D JHX88_02470 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D JHX88_18700 betC; choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6] D JHX88_02260 MBL fold metallo-hydrolase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D JHX88_07850 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D JHX88_04800 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-] D JHX88_11845 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D JHX88_14835 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D JHX88_14485 hypothetical protein K25649 mgh; mannosylglycerate hydrolase [EC:3.2.1.170] D JHX88_12095 glycoside hydrolase family 88 protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D JHX88_19635 DUF4185 domain-containing protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226] D JHX88_07680 serine hydrolase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D JHX88_10270 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JHX88_05470 N-carbamoyl-D-amino-acid hydrolase K01459 E3.5.1.77; N-carbamoyl-D-amino-acid hydrolase [EC:3.5.1.77] D JHX88_18790 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D JHX88_18795 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D JHX88_08170 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D JHX88_11135 alpha/beta fold hydrolase K23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-] D JHX88_21215 cyclase family protein K01475 E3.5.2.20; isatin hydrolase [EC:3.5.2.20] D JHX88_05865 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D JHX88_03860 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D JHX88_16130 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D JHX88_15280 ribulose 1,5-bisphosphate carboxylase K01559 oiaT; 3-oxoisoapionate-4-phosphate transcarboxylase/hydrolase [EC:3.7.1.28] D JHX88_15345 ribulose-bisphosphate carboxylase large subunit family protein K24268 oiaX; 3-oxoisoapionate-4-phosphate decarboxylase [EC:4.1.1.121] D JHX88_05850 DSD1 family PLP-dependent enzyme K18425 dhaa; 3-hydroxy-D-aspartate aldolase [EC:4.1.3.41] D JHX88_00645 altronate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5] D JHX88_07235 altronate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5] D JHX88_07315 caiD; crotonobetainyl-CoA hydratase K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149] D JHX88_00660 adenine nucleotide alpha hydrolase K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D JHX88_00635 LarC family nickel insertion protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D JHX88_07405 sugar phosphate isomerase/epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31] D JHX88_15845 rhaM; L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D JHX88_17210 sugar phosphate isomerase/epimerase K21909 eryC; D-erythrulose 1-phosphate 3-epimerase [EC:5.1.3.38] D JHX88_17590 sugar phosphate isomerase/epimerase K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41] D JHX88_06225 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D JHX88_13625 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D JHX88_17235 triose-phosphate isomerase K21910 eryH; L-erythrulose 1-phosphate isomerase [EC:5.3.1.33] D JHX88_17230 RpiB/LacA/LacB family sugar-phosphate isomerase K21911 eryI; D-erythrulose 4-phosphate isomerase [EC:5.3.1.34] D JHX88_16140 TIM barrel protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D JHX88_11470 feruloyl-CoA synthase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34] D JHX88_15000 acyl--CoA ligase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-] D JHX88_20435 glnT; type III glutamate--ammonia ligase K01949 gmaS; glutamate---methylamine ligase [EC:6.3.4.12] D JHX88_16235 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D JHX88_11030 sugar phosphate isomerase/epimerase K06605 iolH; myo-inositol catabolism protein IolH D JHX88_17570 SIS domain-containing protein K19510 gfrF; fructoselysine-6-phosphate deglycase D JHX88_03550 dihydroxy-acid dehydratase K22216 ilvD1; dehydratase ilvD1 C 99982 Energy metabolism D JHX88_00550 formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D JHX88_14350 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D JHX88_17945 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D JHX88_02145 2Fe-2S iron-sulfur cluster binding domain-containing protein K04755 fdx; ferredoxin, 2Fe-2S D JHX88_04715 2Fe-2S iron-sulfur cluster binding domain-containing protein K04755 fdx; ferredoxin, 2Fe-2S D JHX88_10140 ferredoxin family protein K05524 fdxA; ferredoxin D JHX88_18680 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D JHX88_12300 dodecin domain-containing protein K09165 K09165; dodecin D JHX88_07970 hybrid-cluster NAD(P)-dependent oxidoreductase K24004 stc4; stachydrine N-demethylase, reductase component C 99983 Lipid metabolism D JHX88_02285 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism D JHX88_18075 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D JHX88_16985 EI24 domain-containing protein K06203 cysZ; CysZ protein D JHX88_00100 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein D JHX88_16540 cupin domain-containing protein K21700 bauB; beta-alanine degradation protein BauB C 99986 Glycan metabolism C 99987 Cofactor metabolism D JHX88_21345 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW D JHX88_16340 heme biosynthesis protein HemY K02498 hemY; HemY protein D JHX88_00855 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D JHX88_00540 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D JHX88_00060 COQ9 family protein K18587 COQ9; ubiquinone biosynthesis protein COQ9 D JHX88_16170 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism D JHX88_02315 prolyl oligopeptidase family serine peptidase K03932 lpqC; polyhydroxybutyrate depolymerase C 99999 Others D JHX88_05385 ring-cleaving dioxygenase K15975 K15975; glyoxalase family protein D JHX88_02650 DoxX family protein K15977 K15977; putative oxidoreductase D JHX88_09385 DoxX family protein K15977 K15977; putative oxidoreductase D JHX88_05350 VOC family protein K06999 K06999; phospholipase/carboxylesterase D JHX88_14070 alpha/beta fold hydrolase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D JHX88_05210 cold shock domain-containing protein K03704 cspA; cold shock protein D JHX88_12940 cold-shock protein K03704 cspA; cold shock protein D JHX88_14890 cold-shock protein K03704 cspA; cold shock protein D JHX88_15155 cold-shock protein K03704 cspA; cold shock protein D JHX88_18580 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D JHX88_07685 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D JHX88_16080 trigger factor K03545 tig; trigger factor D JHX88_19920 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D JHX88_21430 urease accessory protein UreE K03187 ureE; urease accessory protein D JHX88_21425 urease accessory protein UreF K03188 ureF; urease accessory protein D JHX88_21420 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D JHX88_21455 urease accessory protein UreD K03190 ureD; urease accessory protein D JHX88_00630 HupE/UreJ family protein K03192 ureJ; urease accessory protein D JHX88_21445 HupE/UreJ family protein K03192 ureJ; urease accessory protein D JHX88_01265 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D JHX88_18070 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH D JHX88_18515 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D JHX88_03380 proteasome-type protease K07395 K07395; putative proteasome-type protease D JHX88_08740 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein D JHX88_05925 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor D JHX88_07940 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor D JHX88_20505 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D JHX88_00830 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D JHX88_06130 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D JHX88_18525 YraN family protein K07460 yraN; putative endonuclease D JHX88_16655 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D JHX88_04050 tyrosine-type recombinase/integrase K07357 fimB; type 1 fimbriae regulatory protein FimB D JHX88_15425 replication-associated recombination protein A K07478 ycaJ; putative ATPase D JHX88_09920 hypothetical protein K06919 K06919; putative DNA primase/helicase D JHX88_03085 IS110 family transposase K07486 K07486; transposase D JHX88_14410 IS110 family transposase K07486 K07486; transposase D JHX88_19665 IS110 family transposase K07486 K07486; transposase D JHX88_06470 IS3 family transposase K07497 K07497; putative transposase D JHX88_04070 transposase family protein K07497 K07497; putative transposase D JHX88_08855 transposase K07497 K07497; putative transposase D JHX88_19500 IS6 family transposase K07498 K07498; putative transposase C 99979 Viral proteins C 99998 Others D JHX88_04835 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D JHX88_04785 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D JHX88_07050 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D JHX88_14455 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D JHX88_04845 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D JHX88_14040 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D JHX88_12470 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D JHX88_09140 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D JHX88_08430 septation protein IspZ K06190 ispZ; intracellular septation protein D JHX88_06755 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility D JHX88_12700 TfoX/Sxy family protein K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D JHX88_16155 typA; translational GTPase TypA K06207 typA; GTP-binding protein D JHX88_01475 HPP family protein K07168 K07168; CBS domain-containing membrane protein D JHX88_05905 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D JHX88_09365 PrkA family serine protein kinase K07180 prkA; serine protein kinase D JHX88_13240 cyclic nucleotide-binding/CBS domain-containing protein K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D JHX88_06160 capsule biosynthesis protein CapA K07265 kpsS; capsular polysaccharide export protein D JHX88_21470 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein D JHX88_06150 capsular polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein D JHX88_17020 glycoside hydrolase family 25 protein K07273 acm; lysozyme D JHX88_06190 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein D JHX88_19625 hypothetical protein K07289 asmA; AsmA protein D JHX88_15735 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D JHX88_09535 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D JHX88_09515 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D JHX88_19165 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH C 99994 Others D JHX88_08995 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D JHX88_15065 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D JHX88_01905 glucan biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein D JHX88_02310 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D JHX88_16470 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D JHX88_21615 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D JHX88_02215 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D JHX88_17830 NAD(P)/FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D JHX88_15790 hemin-degrading factor K07225 hmuS; putative hemin transport protein D JHX88_16780 peptidase K07231 K07231; putative iron-regulated protein B B 09194 Poorly characterized C 99996 General function prediction only D JHX88_04145 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D JHX88_20755 MCE family protein K06192 pqiB; paraquat-inducible protein B D JHX88_00885 pqqB; pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D JHX88_00875 pqqD; pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D JHX88_02775 tRNA-binding protein K06878 K06878; tRNA-binding protein D JHX88_07140 group III truncated hemoglobin K06886 glbN; hemoglobin D JHX88_20240 group II truncated hemoglobin K06886 glbN; hemoglobin D JHX88_13040 patatin-like phospholipase family protein K07001 K07001; NTE family protein D JHX88_07665 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D JHX88_14085 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily D JHX88_18500 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D JHX88_18485 SufD family Fe-S cluster assembly protein K09015 sufD; Fe-S cluster assembly protein SufD D JHX88_20790 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D JHX88_00135 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D JHX88_06040 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D JHX88_14025 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D JHX88_12680 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein K04750 phnB; PhnB protein D JHX88_13190 VOC family protein K04750 phnB; PhnB protein D JHX88_01675 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D JHX88_09075 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D JHX88_11785 SlyX family protein K03745 slyX; SlyX protein D JHX88_20760 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D JHX88_20765 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D JHX88_12935 TIGR01620 family protein K08990 ycjF; putative membrane protein C 99997 Function unknown D JHX88_02865 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D JHX88_12280 TPM domain-containing protein K06872 K06872; uncharacterized protein D JHX88_18125 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein D JHX88_14165 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein D JHX88_12930 YcjX family protein K06918 K06918; uncharacterized protein D JHX88_14305 ATP-binding protein K06923 K06923; uncharacterized protein D JHX88_11820 ATP-binding protein K06926 K06926; uncharacterized protein D JHX88_02710 CoA-binding protein K06929 K06929; uncharacterized protein D JHX88_05345 N-acetyltransferase K06975 K06975; uncharacterized protein D JHX88_02590 VOC family protein K06996 K06996; uncharacterized protein D JHX88_15710 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein D JHX88_18820 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein D JHX88_13955 alpha/beta hydrolase K07018 K07018; uncharacterized protein D JHX88_05815 VOC family protein K07032 K07032; uncharacterized protein D JHX88_16145 VOC family protein K07032 K07032; uncharacterized protein D JHX88_19545 VOC family protein K07032 K07032; uncharacterized protein D JHX88_21935 UPF0149 family protein K07039 K07039; uncharacterized protein D JHX88_11475 amidohydrolase K07045 K07045; uncharacterized protein D JHX88_18175 amidohydrolase K07045 K07045; uncharacterized protein D JHX88_16180 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein D JHX88_12910 OB-fold domain-containing protein K07068 K07068; uncharacterized protein D JHX88_00670 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D JHX88_08830 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D JHX88_11145 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D JHX88_17465 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D JHX88_18340 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D JHX88_20520 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D JHX88_21000 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D JHX88_01965 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D JHX88_13545 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D JHX88_14115 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D JHX88_16085 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D JHX88_20165 TSUP family transporter K07090 K07090; uncharacterized protein D JHX88_18745 PhoX family phosphatase K07093 K07093; uncharacterized protein D JHX88_21505 YeeE/YedE family protein K07112 K07112; uncharacterized protein D JHX88_09665 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D JHX88_02485 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein D JHX88_20740 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein D JHX88_02505 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D JHX88_12950 DsrE family protein K09004 K09004; uncharacterized protein D JHX88_05205 DUF192 domain-containing protein K09005 K09005; uncharacterized protein D JHX88_16930 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D JHX88_16975 DUF167 domain-containing protein K09131 K09131; uncharacterized protein D JHX88_10105 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D JHX88_01775 DUF333 domain-containing protein K09712 K09712; uncharacterized protein D JHX88_20130 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D JHX88_10700 YciI family protein K09780 K09780; uncharacterized protein D JHX88_16365 YciI family protein K09780 K09780; uncharacterized protein D JHX88_02835 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D JHX88_09370 YeaH/YhbH family protein K09786 K09786; uncharacterized protein D JHX88_20845 YbaN family protein K09790 K09790; uncharacterized protein D JHX88_20735 Trm112 family protein K09791 K09791; uncharacterized protein D JHX88_02795 DUF475 domain-containing protein K09799 K09799; uncharacterized protein D JHX88_10930 DUF475 domain-containing protein K09799 K09799; uncharacterized protein D JHX88_13675 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D JHX88_20750 membrane integrity-associated transporter subunit PqiC K09857 K09857; uncharacterized protein D JHX88_14260 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D JHX88_07240 N-acetyltransferase K09919 K09919; uncharacterized protein D JHX88_01285 DUF484 family protein K09921 K09921; uncharacterized protein D JHX88_05305 YcaQ family DNA glycosylase K09927 K09927; uncharacterized protein D JHX88_12420 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D JHX88_02660 DUF692 domain-containing protein K09930 K09930; uncharacterized protein D JHX88_16795 DUF1513 domain-containing protein K09947 K09947; uncharacterized protein D JHX88_17260 DUF2218 domain-containing protein K09956 K09956; uncharacterized protein D JHX88_00975 DUF779 domain-containing protein K09959 K09959; uncharacterized protein D JHX88_13140 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein D JHX88_13940 DUF1989 domain-containing protein K09967 K09967; uncharacterized protein D JHX88_17730 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein D JHX88_13690 TraB/GumN family protein K09973 K09973; uncharacterized protein D JHX88_01200 hypothetical protein K09985 K09985; uncharacterized protein D JHX88_16135 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein D JHX88_03995 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein D JHX88_09470 VWA domain-containing protein K09989 K09989; uncharacterized protein D JHX88_16790 imelysin family protein K07338 K07338; uncharacterized protein D JHX88_08140 RNA-binding protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 23, 2024