+D GENES KO
#
KEGG Orthology (KO) - Pyramidobacter sp. YE332
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pyy00010]
D RAH42_12085 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RAH42_08020 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAH42_05450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RAH42_06050 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RAH42_10140 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAH42_05265 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RAH42_09040 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAH42_09035 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RAH42_01650 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAH42_05935 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAH42_11270 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAH42_08400 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAH42_05790 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RAH42_08440 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RAH42_02125 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_08435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_05670 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RAH42_08750 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RAH42_05645 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAH42_08075 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAH42_05640 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAH42_08070 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAH42_05115 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAH42_08260 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAH42_02605 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:pyy00020]
D RAH42_12470 hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RAH42_02125 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_08435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_05645 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAH42_08075 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAH42_05640 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAH42_08070 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAH42_05630 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RAH42_08065 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RAH42_05650 4Fe-4S dicluster domain-containing protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RAH42_08080 4Fe-4S binding protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RAH42_01770 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RAH42_04490 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAH42_04485 2Fe-2S iron-sulfur cluster-binding protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAH42_09955 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RAH42_07655 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D RAH42_02605 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RAH42_08440 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RAH42_05670 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RAH42_08750 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:pyy00030]
D RAH42_08020 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAH42_01135 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RAH42_05345 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAH42_11845 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RAH42_08865 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RAH42_05115 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAH42_08260 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAH42_12355 aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D RAH42_10140 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAH42_06050 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RAH42_05450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:pyy00040]
D RAH42_02635 UxaA family hydrolase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D RAH42_02735 UxaA family hydrolase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D RAH42_02900 UxaA family hydrolase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D RAH42_02630 UxaA family hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D RAH42_02740 UxaA family hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D RAH42_02905 UxaA family hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D RAH42_01135 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:pyy00051]
D RAH42_03920 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RAH42_08260 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAH42_05450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RAH42_06050 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RAH42_10140 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAH42_05265 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:pyy00052]
D RAH42_07250 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAH42_05115 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAH42_08260 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAH42_12085 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RAH42_07220 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RAH42_08420 PfkB family carbohydrate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D RAH42_05450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:pyy00500]
D RAH42_02990 glgP; alpha-glucan family phosphorylase K16153 K16153; glycogen phosphorylase/synthase [EC:2.4.1.1 2.4.1.11]
D RAH42_02995 glycoside hydrolase family 57 protein K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1]
D RAH42_05115 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAH42_08260 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAH42_12085 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RAH42_08020 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAH42_03920 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pyy00520]
D RAH42_03920 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RAH42_08380 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAH42_08385 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RAH42_07690 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RAH42_06605 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RAH42_08565 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RAH42_08900 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RAH42_12085 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RAH42_05115 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAH42_08260 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAH42_07250 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAH42_07220 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RAH42_08020 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:pyy00620]
D RAH42_05670 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RAH42_08750 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RAH42_05645 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAH42_08075 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAH42_05640 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAH42_08070 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAH42_08440 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RAH42_02125 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_08435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_08205 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAH42_08400 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAH42_01770 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RAH42_04800 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RAH42_06280 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RAH42_11225 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RAH42_02260 lactate racemase domain-containing protein K22373 larA; lactate racemase [EC:5.1.2.1]
D RAH42_10195 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RAH42_00735 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RAH42_08305 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RAH42_07655 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D RAH42_09955 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RAH42_02605 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RAH42_05790 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RAH42_12325 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pyy00630]
D RAH42_12470 hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RAH42_12325 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAH42_07940 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RAH42_01780 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAH42_01785 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAH42_07720 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RAH42_11830 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RAH42_02575 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAH42_08830 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAH42_01985 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAH42_02565 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAH42_01920 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RAH42_02115 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RAH42_01925 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RAH42_02120 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RAH42_02105 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAH42_02125 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_08435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_02110 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RAH42_00440 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RAH42_02455 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:pyy00640]
D RAH42_08205 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAH42_02125 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_08435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_07940 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RAH42_01780 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAH42_01785 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 00650 Butanoate metabolism [PATH:pyy00650]
D RAH42_12325 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAH42_12315 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RAH42_12320 3-oxoacid CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RAH42_09260 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D RAH42_00030 iron-containing alcohol dehydrogenase K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-]
D RAH42_12795 iron-containing alcohol dehydrogenase K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-]
D RAH42_12940 iron-containing alcohol dehydrogenase K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-]
D RAH42_00735 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RAH42_08305 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RAH42_06620 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RAH42_06625 OadG family transporter subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RAH42_04490 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAH42_04485 2Fe-2S iron-sulfur cluster-binding protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAH42_01770 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RAH42_05670 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RAH42_08750 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RAH42_05645 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAH42_08075 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAH42_05640 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAH42_08070 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAH42_05680 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAH42_05135 NAD(P)-dependent alcohol dehydrogenase K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80]
C 00660 C5-Branched dibasic acid metabolism [PATH:pyy00660]
D RAH42_03800 aconitase/3-isopropylmalate dehydratase large subunit family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RAH42_10175 aconitase/3-isopropylmalate dehydratase large subunit family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RAH42_03795 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RAH42_10170 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
C 00562 Inositol phosphate metabolism
D RAH42_05265 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pyy00190]
D RAH42_12700 NADH-dependent [FeFe] hydrogenase, group A6 K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RAH42_04490 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAH42_04485 2Fe-2S iron-sulfur cluster-binding protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAH42_08925 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D RAH42_08920 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RAH42_09605 hypothetical protein K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RAH42_08935 V-type ATPase subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D RAH42_09620 V-type ATPase subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D RAH42_08915 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D RAH42_08940 V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D RAH42_08930 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D RAH42_08950 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RAH42_09635 V-type ATPase 116kDa subunit family protein K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RAH42_08945 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D RAH42_09630 ATPase K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pyy00710]
D RAH42_09035 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RAH42_09040 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAH42_10140 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAH42_06050 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RAH42_05345 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAH42_05265 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RAH42_01135 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RAH42_11845 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RAH42_02605 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00720 Other carbon fixation pathways [PATH:pyy00720]
D RAH42_05670 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RAH42_08750 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RAH42_05790 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RAH42_07655 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D RAH42_09955 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RAH42_04490 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAH42_04485 2Fe-2S iron-sulfur cluster-binding protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAH42_12325 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAH42_05645 vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAH42_08075 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAH42_05640 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAH42_08070 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAH42_05630 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RAH42_08065 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RAH42_05650 4Fe-4S dicluster domain-containing protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RAH42_08080 4Fe-4S binding protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RAH42_12470 hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RAH42_07940 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RAH42_01780 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAH42_01785 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAH42_02495 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RAH42_02485 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RAH42_00070 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RAH42_02490 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RAH42_12835 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RAH42_12975 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RAH42_09220 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RAH42_08205 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:pyy00680]
D RAH42_01985 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAH42_02565 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAH42_11270 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAH42_10140 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAH42_06050 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RAH42_05450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RAH42_05400 FmdE family protein K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D RAH42_08205 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAH42_05790 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RAH42_01650 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAH42_05935 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAH42_01995 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAH42_05255 NAD(P)-dependent oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAH42_09735 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAH42_05625 histidine phosphatase family protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D RAH42_12290 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D RAH42_07425 Ldh family oxidoreductase K05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337]
C 00910 Nitrogen metabolism [PATH:pyy00910]
D RAH42_00355 ABC transporter ATP-binding protein K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D RAH42_01385 nitrogenase iron protein NifH K02588 nifH; nitrogenase iron protein NifH
D RAH42_08970 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D RAH42_07355 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RAH42_05890 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAH42_02575 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAH42_08830 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAH42_08030 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RAH42_00625 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:pyy00920]
D RAH42_00350 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_00690 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_00700 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_01530 NrtA/SsuA/CpmA family ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_05895 NrtA/SsuA/CpmA family ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_00675 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D RAH42_01510 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RAH42_09535 DHH family phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pyy00061]
D RAH42_08165 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RAH42_08175 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RAH42_08320 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAH42_08160 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAH42_08170 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAH42_05590 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RAH42_08180 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D RAH42_01585 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAH42_10500 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pyy00071]
D RAH42_12325 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAH42_01585 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAH42_10500 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pyy00561]
D RAH42_00440 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RAH42_02455 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RAH42_08185 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RAH42_06265 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RAH42_06020 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAH42_01190 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:pyy00564]
D RAH42_06120 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RAH42_09945 NAD(P)/FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RAH42_06265 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RAH42_06020 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAH42_01190 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RAH42_06585 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RAH42_07455 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RAH42_07450 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RAH42_03565 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RAH42_01120 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D RAH42_08890 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D RAH42_08425 GDSL-type esterase/lipase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pyy00230]
D RAH42_06945 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RAH42_05115 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAH42_08260 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAH42_01085 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RAH42_08615 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RAH42_08605 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RAH42_08595 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D RAH42_08585 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D RAH42_08590 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RAH42_08600 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RAH42_08620 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RAH42_01500 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RAH42_06055 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RAH42_08610 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RAH42_08880 phosphoribosyltransferase family protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RAH42_07360 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RAH42_06935 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RAH42_06650 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RAH42_08145 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RAH42_11535 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RAH42_07850 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RAH42_11385 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RAH42_06000 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RAH42_07705 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAH42_01760 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RAH42_11235 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RAH42_08735 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RAH42_08625 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RAH42_07555 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D RAH42_10930 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RAH42_04150 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RAH42_07660 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RAH42_00795 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D RAH42_01885 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D RAH42_04345 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D RAH42_01880 dihydroorotase family protein K01466 allB; allantoinase [EC:3.5.2.5]
D RAH42_01905 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D RAH42_00625 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:pyy00240]
D RAH42_04870 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RAH42_04865 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RAH42_04855 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RAH42_00755 D-aminoacylase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RAH42_01845 D-aminoacylase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RAH42_02775 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RAH42_02955 amidohydrolase family protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RAH42_04860 dihydroorotase family protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RAH42_02785 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D RAH42_02780 FAD-binding oxidoreductase K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D RAH42_02795 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RAH42_02790 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RAH42_07565 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RAH42_07660 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RAH42_08665 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RAH42_01575 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RAH42_06025 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RAH42_08240 nucleoside kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D RAH42_07360 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RAH42_09205 nucleoside phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D RAH42_06615 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RAH42_02800 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RAH42_10930 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RAH42_01460 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RAH42_01760 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RAH42_07705 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAH42_07370 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RAH42_06075 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RAH42_06450 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RAH42_03460 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RAH42_01875 dihydroorotase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAH42_02770 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pyy00250]
D RAH42_00435 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_02875 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03685 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_07545 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_12590 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RAH42_08875 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RAH42_10845 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RAH42_02625 hypothetical protein K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RAH42_03070 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RAH42_04340 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAH42_08625 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RAH42_06055 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RAH42_04855 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RAH42_08030 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RAH42_05890 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAH42_02575 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAH42_08830 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAH42_04870 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RAH42_04865 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RAH42_08590 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RAH42_08380 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAH42_01085 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pyy00260]
D RAH42_12640 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAH42_12615 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAH42_01450 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAH42_02510 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAH42_05030 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAH42_00480 threonine aldolase family protein K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RAH42_09255 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RAH42_01985 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAH42_02565 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAH42_00440 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RAH42_02455 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RAH42_01650 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAH42_05935 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAH42_01995 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAH42_05255 NAD(P)-dependent oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAH42_09735 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAH42_05625 histidine phosphatase family protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D RAH42_06465 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RAH42_01920 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RAH42_02115 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RAH42_01925 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RAH42_02120 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RAH42_02105 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAH42_02125 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_08435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_02110 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RAH42_07455 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RAH42_09230 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RAH42_09235 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RAH42_12015 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RAH42_12020 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:pyy00270]
D RAH42_02675 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RAH42_09210 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAH42_06135 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RAH42_06650 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RAH42_00080 amidohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D RAH42_07000 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D RAH42_12985 amidohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D RAH42_01445 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D RAH42_07005 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAH42_12640 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAH42_12615 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAH42_00435 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_02875 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03685 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_07545 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_09230 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RAH42_09235 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RAH42_12015 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RAH42_12020 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RAH42_01995 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAH42_05255 NAD(P)-dependent oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAH42_09735 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:pyy00280]
D RAH42_02125 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_08435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_07940 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RAH42_01780 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAH42_01785 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAH42_04335 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RAH42_12780 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RAH42_13045 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RAH42_05680 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAH42_12325 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pyy00290]
D RAH42_03800 aconitase/3-isopropylmalate dehydratase large subunit family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RAH42_10175 aconitase/3-isopropylmalate dehydratase large subunit family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RAH42_03795 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RAH42_10170 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RAH42_03705 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
C 00300 Lysine biosynthesis [PATH:pyy00300]
D RAH42_12640 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAH42_12615 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAH42_12625 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAH42_12630 dihydrodipicolinate reductase C-terminal domain-containing protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RAH42_12635 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RAH42_01275 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RAH42_01180 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RAH42_12105 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAH42_00005 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RAH42_03645 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RAH42_10985 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RAH42_12785 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RAH42_09110 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RAH42_09105 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pyy00310]
D RAH42_02125 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_08435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_12325 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAH42_04980 ldcC; lysine decarboxylase LdcC K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D RAH42_12315 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RAH42_12320 3-oxoacid CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00220 Arginine biosynthesis [PATH:pyy00220]
D RAH42_00645 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RAH42_03070 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RAH42_04340 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAH42_08590 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RAH42_02575 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAH42_08830 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAH42_04870 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RAH42_04865 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RAH42_00625 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D RAH42_05890 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAH42_00435 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_02875 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03685 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_07545 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:pyy00330]
D RAH42_02065 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RAH42_02070 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RAH42_02185 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RAH42_11885 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RAH42_00570 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAH42_02945 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAH42_11755 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAH42_08120 pyrroline-5-carboxylate reductase dimerization domain-containing protein K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RAH42_06240 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RAH42_06235 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RAH42_00435 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_02875 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03685 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_07545 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pyy00340]
D RAH42_03055 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RAH42_03060 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RAH42_03020 hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D RAH42_03030 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RAH42_03035 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RAH42_03025 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RAH42_03040 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RAH42_03045 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAH42_03015 histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D RAH42_03715 histidinol-phosphatase HisJ family protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D RAH42_03050 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RAH42_10840 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RAH42_10835 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D RAH42_10830 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D RAH42_00075 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D RAH42_12980 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:pyy00350]
D RAH42_00435 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_02875 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03685 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_07545 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03045 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:pyy00360]
D RAH42_00435 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_02875 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03685 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_07545 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03045 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAH42_00570 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAH42_02945 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAH42_11755 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAH42_06880 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D RAH42_09730 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism [PATH:pyy00380]
D RAH42_02125 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_08435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_12325 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAH42_00570 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAH42_02945 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAH42_11755 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pyy00400]
D RAH42_01430 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RAH42_01420 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RAH42_01390 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RAH42_01405 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RAH42_01400 prephenate dehydratase domain-containing protein K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D RAH42_01425 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RAH42_00435 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_02875 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03685 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_07545 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03045 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pyy00410]
D RAH42_01875 dihydroorotase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAH42_02770 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00430 Taurine and hypotaurine metabolism [PATH:pyy00430]
D RAH42_03135 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAH42_04630 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAH42_08285 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAH42_02625 hypothetical protein K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RAH42_08205 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:pyy00450]
D RAH42_02675 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RAH42_09210 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAH42_10345 SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RAH42_03480 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RAH42_09375 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RAH42_02810 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RAH42_08555 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D RAH42_11145 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pyy00460]
D RAH42_03135 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAH42_04630 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAH42_08285 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAH42_08875 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RAH42_10845 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RAH42_01985 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAH42_02565 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pyy00470]
D RAH42_09800 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAH42_08590 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RAH42_04600 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RAH42_09095 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RAH42_12590 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RAH42_01180 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RAH42_12105 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:pyy00480]
D RAH42_03135 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAH42_04630 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAH42_08285 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAH42_01285 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:pyy00540]
D RAH42_05585 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RAH42_05595 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RAH42_05600 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RAH42_05570 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RAH42_05565 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RAH42_05540 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RAH42_05545 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RAH42_05580 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RAH42_05525 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RAH42_05535 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RAH42_05930 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RAH42_09395 hypothetical protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RAH42_05460 gmhA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RAH42_05470 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D RAH42_05465 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RAH42_00885 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
C 00542 O-Antigen repeat unit biosynthesis [PATH:pyy00542]
D RAH42_06610 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pyy00541]
D RAH42_07250 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAH42_07220 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RAH42_04880 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAH42_07155 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAH42_07170 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAH42_07195 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAH42_07690 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RAH42_08900 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:pyy00550]
D RAH42_06605 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RAH42_08565 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RAH42_09080 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RAH42_09095 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RAH42_09110 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RAH42_09800 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAH42_09105 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RAH42_06590 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RAH42_08670 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAH42_09100 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RAH42_09085 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RAH42_04705 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RAH42_11200 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RAH42_09120 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:pyy00552]
D RAH42_08670 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAH42_06610 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RAH42_07500 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pyy00543]
D RAH42_06610 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pyy00730]
D RAH42_12120 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RAH42_02350 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RAH42_06495 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RAH42_09810 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RAH42_02355 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RAH42_04150 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pyy00740]
D RAH42_05000 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RAH42_09670 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RAH42_09660 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RAH42_09665 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RAH42_09525 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RAH42_09810 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RAH42_06945 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:pyy00750]
D RAH42_11140 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D RAH42_01450 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAH42_02510 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAH42_05030 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pyy00760]
D RAH42_07840 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RAH42_06935 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RAH42_07360 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RAH42_07505 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RAH42_07660 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RAH42_12735 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RAH42_06565 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RAH42_01115 nicotinamide-nucleotide amidohydrolase family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RAH42_07750 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D RAH42_07390 Sir2 family NAD-dependent protein deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RAH42_06485 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RAH42_03755 PrpF domain-containing protein K20451 mii; methylitaconate Delta-isomerase [EC:5.3.3.6]
D RAH42_03105 isocitrate lyase/PEP mutase family protein K20454 dml; 2,3-dimethylmalate lyase [EC:4.1.3.32]
C 00770 Pantothenate and CoA biosynthesis [PATH:pyy00770]
D RAH42_03705 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RAH42_10310 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RAH42_02910 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RAH42_10300 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RAH42_00330 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RAH42_00335 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RAH42_07660 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RAH42_08215 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RAH42_07785 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RAH42_08100 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RAH42_01875 dihydroorotase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAH42_02770 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:pyy00780]
D RAH42_08160 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAH42_08170 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAH42_05590 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RAH42_10975 hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D RAH42_07475 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pyy00785]
D RAH42_02255 biotin/lipoate A/B protein ligase family protein K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RAH42_02245 radical SAM protein K09711 lipS1; lipoyl synthase
D RAH42_02250 radical SAM protein K24689 lipS2; lipoyl synthase
D RAH42_02100 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RAH42_08430 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RAH42_02125 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_08435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_08440 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RAH42_01920 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RAH42_02115 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RAH42_01925 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RAH42_02120 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RAH42_02105 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAH42_02110 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pyy00790]
D RAH42_06655 folylpolyglutamate synthase/dihydrofolate synthase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RAH42_05000 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RAH42_01320 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RAH42_00200 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
C 00670 One carbon pool by folate [PATH:pyy00670]
D RAH42_02495 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RAH42_02485 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RAH42_00070 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RAH42_02490 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RAH42_12835 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RAH42_12975 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RAH42_01985 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAH42_02565 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAH42_08605 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RAH42_08610 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RAH42_00075 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D RAH42_12980 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D RAH42_06950 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RAH42_02105 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAH42_09210 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAH42_03460 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RAH42_09220 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pyy00860]
D RAH42_06725 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAH42_10410 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RAH42_10420 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RAH42_04320 uroporphyrinogen decarboxylase family protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RAH42_10415 cobA; uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D RAH42_10485 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RAH42_10465 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D RAH42_10430 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D RAH42_10440 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RAH42_10435 cobalt-precorrin 5A hydrolase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D RAH42_10425 cobK; precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D RAH42_10450 cbiD; cobalt-precorrin-5B (C(1))-methyltransferase CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D RAH42_10445 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D RAH42_10455 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RAH42_10405 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RAH42_08815 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RAH42_01030 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RAH42_12560 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RAH42_11070 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RAH42_12575 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RAH42_12570 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RAH42_12585 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RAH42_12565 histidine phosphatase family protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D RAH42_11740 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D RAH42_12540 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pyy00900]
D RAH42_06495 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RAH42_06580 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RAH42_09575 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D RAH42_08545 hypothetical protein K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RAH42_06570 ispG; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RAH42_06965 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RAH42_12325 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAH42_06500 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RAH42_06590 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
D RAH42_05680 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RAH42_05345 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pyy00523]
D RAH42_04880 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAH42_07155 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAH42_07170 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAH42_07195 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAH42_07160 DegT/DnrJ/EryC1/StrS family aminotransferase K21337 mdpA5; aminotransferase
C 01054 Nonribosomal peptide structures [PATH:pyy01054]
D RAH42_12590 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:pyy00332]
D RAH42_06240 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RAH42_06235 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pyy00261]
D RAH42_12640 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAH42_12615 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAH42_12625 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAH42_12630 dihydrodipicolinate reductase C-terminal domain-containing protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pyy00521]
D RAH42_12085 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RAH42_05115 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAH42_08260 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAH42_04880 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAH42_07155 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAH42_07170 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAH42_07195 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RAH42_12085 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D RAH42_04880 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAH42_07155 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00401 Novobiocin biosynthesis [PATH:pyy00401]
D RAH42_01425 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RAH42_00435 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_02875 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03685 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_07545 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03045 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D RAH42_08175 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RAH42_08170 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:pyy00998]
D RAH42_08165 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RAH42_12000 ornithine cyclodeaminase family protein K21721 sbnB; N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase [EC:1.5.1.51]
C 00999 Biosynthesis of various plant secondary metabolites
D RAH42_06135 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D RAH42_12000 ornithine cyclodeaminase family protein K21721 sbnB; N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase [EC:1.5.1.51]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pyy00362]
D RAH42_06880 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D RAH42_09730 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D RAH42_00735 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RAH42_08305 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RAH42_06620 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RAH42_06625 OadG family transporter subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RAH42_12325 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:pyy00627]
D RAH42_00570 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAH42_02945 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAH42_11755 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAH42_12315 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RAH42_12320 3-oxoacid CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D RAH42_01385 nitrogenase iron protein NifH K02588 nifH; nitrogenase iron protein NifH
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D RAH42_06880 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D RAH42_09730 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:pyy00643]
D RAH42_00570 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAH42_02945 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAH42_11755 acetamidase/formamidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D RAH42_06880 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D RAH42_09730 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pyy03020]
D RAH42_04010 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RAH42_04015 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RAH42_04180 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RAH42_10110 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pyy03010]
D RAH42_06960 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D RAH42_07575 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RAH42_04075 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RAH42_05940 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RAH42_04130 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RAH42_03615 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RAH42_04025 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RAH42_04115 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RAH42_07830 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RAH42_04040 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RAH42_04175 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RAH42_04020 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RAH42_04170 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RAH42_04110 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RAH42_06460 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RAH42_10870 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RAH42_04090 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RAH42_03625 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RAH42_04065 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RAH42_09305 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RAH42_03550 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RAH42_03305 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RAH42_04060 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RAH42_04045 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RAH42_04050 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RAH42_04105 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RAH42_04120 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RAH42_03315 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RAH42_03635 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RAH42_03310 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RAH42_03300 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RAH42_07835 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RAH42_04095 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RAH42_04140 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RAH42_04080 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RAH42_04185 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RAH42_04125 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RAH42_10890 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RAH42_06405 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RAH42_07525 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RAH42_04070 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RAH42_04055 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RAH42_04100 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RAH42_07680 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RAH42_07515 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RAH42_06510 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RAH42_04085 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RAH42_04135 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RAH42_03455 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RAH42_08195 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RAH42_03280 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RAH42_09290 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RAH42_06410 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RAH42_04165 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pyy00970]
D RAH42_06725 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAH42_05280 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAH42_05275 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RAH42_05285 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RAH42_06995 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAH42_11305 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAH42_04940 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAH42_01590 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RAH42_07610 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RAH42_07605 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RAH42_06445 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAH42_09655 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RAH42_08555 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D RAH42_09685 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RAH42_11145 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RAH42_06950 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RAH42_06660 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAH42_09315 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAH42_09890 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RAH42_05305 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAH42_03580 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAH42_11400 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RAH42_04935 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RAH42_06400 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAH42_06395 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RAH42_09390 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAH42_07995 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pyy03060]
D RAH42_04145 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RAH42_03290 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RAH42_07845 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RAH42_11255 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RAH42_11250 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RAH42_06140 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAH42_11260 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAH42_09275 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAH42_03570 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAH42_10865 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RAH42_06060 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RAH42_09155 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pyy04122]
D RAH42_05370 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RAH42_05440 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:pyy03018]
D RAH42_11270 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAH42_06455 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RAH42_06320 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RAH42_05865 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAH42_10935 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RAH42_08675 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RAH42_05450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RAH42_03520 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAH42_08800 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pyy03030]
D RAH42_05085 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAH42_06850 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAH42_08405 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAH42_08410 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAH42_06070 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAH42_09310 DNA-binding protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAH42_00845 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAH42_03640 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RAH42_11280 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RAH42_03620 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAH42_12565 histidine phosphatase family protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D RAH42_05815 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RAH42_06735 DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAH42_05290 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pyy03410]
D RAH42_05430 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RAH42_07805 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RAH42_03010 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RAH42_09510 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RAH42_06595 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RAH42_11075 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RAH42_06205 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RAH42_01305 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RAH42_06735 DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAH42_11240 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RAH42_05290 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pyy03420]
D RAH42_07665 helicase-related protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RAH42_08130 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RAH42_08135 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RAH42_09675 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RAH42_03960 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAH42_07790 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAH42_06735 DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAH42_05290 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pyy03430]
D RAH42_06985 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RAH42_06375 Smr/MutS family protein K07456 mutS2; DNA mismatch repair protein MutS2
D RAH42_06975 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RAH42_03960 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAH42_07790 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAH42_07010 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RAH42_06505 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RAH42_11240 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RAH42_03620 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAH42_08405 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAH42_00845 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAH42_08410 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAH42_09310 DNA-binding protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAH42_06070 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAH42_05085 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAH42_06850 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAH42_05290 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:pyy03440]
D RAH42_11240 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RAH42_03620 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAH42_00850 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RAH42_07615 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RAH42_09585 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D RAH42_01105 recA; recombinase RecA K03553 recA; recombination protein RecA
D RAH42_06735 DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAH42_06550 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RAH42_06545 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RAH42_06555 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RAH42_03405 ATP-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAH42_07255 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAH42_07275 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAH42_08910 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAH42_08405 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAH42_00845 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAH42_08410 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAH42_09310 DNA-binding protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAH42_06070 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAH42_05085 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAH42_06850 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pyy02010]
D RAH42_00355 ABC transporter ATP-binding protein K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D RAH42_00350 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_00690 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_00700 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_01530 NrtA/SsuA/CpmA family ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_05895 NrtA/SsuA/CpmA family ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_00675 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D RAH42_01510 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RAH42_00195 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAH42_00950 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAH42_01260 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAH42_01675 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAH42_05900 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAH42_12435 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAH42_00940 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAH42_01255 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAH42_01670 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAH42_05905 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAH42_12430 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAH42_00935 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAH42_00945 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAH42_01250 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAH42_01665 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAH42_05910 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAH42_12425 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAH42_04690 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RAH42_04695 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D RAH42_04700 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RAH42_01195 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RAH42_02940 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RAH42_02930 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RAH42_02935 substrate-binding domain-containing protein K10549 alsB; D-allose transport system substrate-binding protein
D RAH42_03215 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RAH42_08335 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D RAH42_03210 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D RAH42_08340 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RAH42_03205 ABC transporter permease subunit K02038 pstA; phosphate transport system permease protein
D RAH42_08345 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RAH42_03200 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAH42_08350 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAH42_04350 transporter substrate-binding domain-containing protein K10036 glnH; glutamine transport system substrate-binding protein
D RAH42_09405 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D RAH42_01065 transporter substrate-binding domain-containing protein K09996 artJ; arginine transport system substrate-binding protein
D RAH42_11690 transporter substrate-binding domain-containing protein K09996 artJ; arginine transport system substrate-binding protein
D RAH42_10905 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RAH42_12350 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RAH42_03355 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RAH42_03360 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RAH42_03365 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RAH42_10370 ABC transporter substrate-binding protein/permease K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RAH42_03370 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D RAH42_10900 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D RAH42_12345 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D RAH42_03375 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D RAH42_10895 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D RAH42_12340 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D RAH42_03075 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RAH42_06185 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RAH42_04355 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D RAH42_09400 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D RAH42_04360 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D RAH42_01975 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAH42_02010 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAH42_12730 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAH42_01970 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAH42_02015 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAH42_12725 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAH42_01965 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAH42_02020 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAH42_12720 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAH42_01960 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAH42_02025 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAH42_12715 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAH42_01955 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAH42_02030 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAH42_12710 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAH42_01235 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D RAH42_01230 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RAH42_01225 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D RAH42_09760 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RAH42_09740 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RAH42_09745 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RAH42_09750 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RAH42_09755 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RAH42_00510 ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D RAH42_09775 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D RAH42_10475 ABC transporter ATP-binding protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D RAH42_10080 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D RAH42_11670 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D RAH42_10090 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D RAH42_11660 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D RAH42_10085 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RAH42_11665 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RAH42_11345 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D RAH42_11350 CbiQ family ECF transporter T component K02008 cbiQ; cobalt/nickel transport system permease protein
D RAH42_11355 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RAH42_09905 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D RAH42_11335 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D RAH42_11340 hypothetical protein K16915 cbiL; nickel transport protein
D RAH42_11300 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RAH42_04200 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D RAH42_04190 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RAH42_04195 ATP-binding cassette domain-containing protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RAH42_02970 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D RAH42_07135 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D RAH42_07140 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RAH42_02975 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D RAH42_05575 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D RAH42_10130 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RAH42_08645 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RAH42_08650 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D RAH42_00300 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D RAH42_06695 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D RAH42_00295 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D RAH42_06700 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D RAH42_05555 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS) [PATH:pyy02060]
D RAH42_08810 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
C 03070 Bacterial secretion system [PATH:pyy03070]
D RAH42_04540 TolC family protein K12340 tolC; outer membrane protein
D RAH42_11060 TolC family protein K12340 tolC; outer membrane protein
D RAH42_10520 TolC family protein K12340 tolC; outer membrane protein
D RAH42_07085 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RAH42_11255 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RAH42_11250 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RAH42_03290 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RAH42_07845 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RAH42_04145 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RAH42_06140 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAH42_11260 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAH42_09275 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAH42_03570 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAH42_06060 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RAH42_10865 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pyy02020]
D RAH42_08365 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RAH42_03215 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RAH42_08335 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D RAH42_00520 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_02640 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_03115 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_08720 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_11635 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_11775 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_12410 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_02645 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAH42_03120 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAH42_11630 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAH42_12415 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAH42_08725 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAH42_00530 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAH42_02650 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAH42_11625 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAH42_12420 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAH42_00840 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RAH42_11540 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAH42_04785 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D RAH42_03745 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D RAH42_10190 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D RAH42_11780 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D RAH42_03740 aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RAH42_10185 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RAH42_11785 aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RAH42_03735 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D RAH42_10180 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D RAH42_11790 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D RAH42_08845 citX; citrate lyase holo-[acyl-carrier protein] synthase K13927 citXG; holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase [EC:2.7.7.61 2.4.2.52]
D RAH42_10240 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D RAH42_04905 response regulator K11615 malR; two-component system, CitB family, response regulator MalR
D RAH42_10195 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RAH42_10200 2-hydroxycarboxylate transporter family protein K11616 maeN; malate:Na+ symporter
D RAH42_02575 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAH42_08830 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAH42_12315 CoA transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RAH42_12320 3-oxoacid CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RAH42_12330 TIGR00366 family protein K02106 atoE; short-chain fatty acids transporter
D RAH42_12325 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAH42_12045 dctP; TRAP transporter substrate-binding protein DctP K11688 dctP; C4-dicarboxylate-binding protein DctP
D RAH42_02760 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D RAH42_02765 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RAH42_08445 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RAH42_00820 response regulator K07720 yesN; two-component system, response regulator YesN
D RAH42_04540 TolC family protein K12340 tolC; outer membrane protein
D RAH42_11060 TolC family protein K12340 tolC; outer membrane protein
D RAH42_10520 TolC family protein K12340 tolC; outer membrane protein
D RAH42_08900 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pyy02024]
D RAH42_01975 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAH42_02010 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAH42_12730 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAH42_01970 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAH42_02015 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAH42_12725 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAH42_01965 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAH42_02020 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAH42_12720 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAH42_01960 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAH42_02025 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAH42_12715 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAH42_01955 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAH42_02030 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAH42_12710 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAH42_01585 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAH42_10500 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAH42_09670 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RAH42_09760 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RAH42_09740 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RAH42_09745 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RAH42_09750 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RAH42_09755 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RAH42_01805 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_01810 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_02060 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_02200 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_03485 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_04255 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_04275 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_04285 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_04680 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_09785 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_10035 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_12765 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_00490 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_01835 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_02035 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_02205 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_03490 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_04290 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_04675 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_05180 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_09780 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_10040 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_12760 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_00495 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_01830 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_02045 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_02210 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_03495 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_04295 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_04670 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_05185 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_10045 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_12755 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_01825 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_02050 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_02215 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_03500 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_04300 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_04665 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_05190 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_09770 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_10050 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_12750 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_00500 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_00505 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_01820 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_02055 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_02220 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_03505 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_04305 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_04660 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_05195 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_10055 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_12745 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_09275 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAH42_03290 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RAH42_07845 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RAH42_04145 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RAH42_06140 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAH42_11260 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAH42_03570 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAH42_06060 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RAH42_10865 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D RAH42_02940 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:pyy02040]
D RAH42_10905 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RAH42_12350 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RAH42_06705 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RAH42_11270 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:pyy04980]
D RAH42_01775 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D RAH42_01780 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAH42_01785 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAH42_09210 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pyy01501]
D RAH42_09760 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RAH42_09740 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RAH42_09745 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RAH42_09750 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RAH42_09755 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RAH42_05235 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAH42_11900 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAH42_11905 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAH42_04540 TolC family protein K12340 tolC; outer membrane protein
D RAH42_11060 TolC family protein K12340 tolC; outer membrane protein
D RAH42_10520 TolC family protein K12340 tolC; outer membrane protein
D RAH42_11200 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RAH42_09120 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pyy01502]
D RAH42_11540 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAH42_09800 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAH42_09105 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RAH42_09100 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RAH42_09085 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pyy01503]
D RAH42_07865 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RAH42_05235 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAH42_11900 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAH42_11905 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAH42_04540 TolC family protein K12340 tolC; outer membrane protein
D RAH42_11060 TolC family protein K12340 tolC; outer membrane protein
D RAH42_10520 TolC family protein K12340 tolC; outer membrane protein
D RAH42_05585 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pyy01000]
C 01001 Protein kinases [BR:pyy01001]
D RAH42_08365 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RAH42_04900 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pyy01009]
D RAH42_07005 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAH42_05450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:pyy01002]
D RAH42_07945 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RAH42_10125 hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D RAH42_00340 C1 family peptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D RAH42_12535 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D RAH42_11385 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RAH42_07325 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D RAH42_01085 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RAH42_08380 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAH42_03815 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D RAH42_10060 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D RAH42_04595 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D RAH42_11540 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAH42_11815 M20/M25/M40 family metallo-hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D RAH42_01275 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RAH42_02570 M20/M25/M40 family metallo-hydrolase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D RAH42_04655 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D RAH42_04885 M20/M25/M40 family metallo-hydrolase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D RAH42_06085 amidohydrolase K12940 abgA; aminobenzoyl-glutamate utilization protein A
D RAH42_00720 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D RAH42_12600 M20 family metallopeptidase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D RAH42_01905 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D RAH42_05335 Xaa-Pro peptidase family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RAH42_04330 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D RAH42_02405 iadA; beta-aspartyl-peptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D RAH42_05050 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RAH42_08140 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RAH42_06575 M50 family metallopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RAH42_00515 M55 family metallopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D RAH42_09950 M55 family metallopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D RAH42_00730 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D RAH42_07905 DegQ family serine endoprotease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D RAH42_06680 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RAH42_06670 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RAH42_09175 S24 family peptidase K01356 lexA; repressor LexA [EC:3.4.21.88]
D RAH42_08635 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RAH42_11730 Type 1 glutamine amidotransferase-like domain-containing protein K05995 pepE; dipeptidase E [EC:3.4.13.21]
D RAH42_05765 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RAH42_03135 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAH42_04630 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAH42_08285 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAH42_09700 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D RAH42_07870 TldD/PmbA family protein K03592 pmbA; PmbA protein
D RAH42_06520 TldD/PmbA family protein K03568 tldD; TldD protein
D RAH42_04710 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:pyy01003]
D RAH42_02990 glgP; alpha-glucan family phosphorylase K16153 K16153; glycogen phosphorylase/synthase [EC:2.4.1.1 2.4.1.11]
D RAH42_04705 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RAH42_06610 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pyy01005]
D RAH42_05585 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RAH42_05565 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RAH42_05595 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RAH42_05600 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RAH42_05570 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RAH42_05930 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RAH42_09395 hypothetical protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RAH42_05535 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RAH42_05545 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RAH42_05525 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RAH42_05580 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RAH42_05540 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RAH42_00885 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D RAH42_05460 gmhA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RAH42_05465 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RAH42_05470 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D RAH42_05040 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D RAH42_06610 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pyy01011]
D RAH42_06605 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RAH42_08565 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RAH42_09080 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RAH42_09095 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RAH42_09110 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RAH42_09800 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAH42_04600 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RAH42_09100 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RAH42_09085 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RAH42_08670 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAH42_03270 lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RAH42_10120 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RAH42_04705 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RAH42_11200 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RAH42_09120 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RAH42_11540 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAH42_02365 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RAH42_06530 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RAH42_06540 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D RAH42_07865 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pyy01004]
D RAH42_08175 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RAH42_08320 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAH42_08160 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAH42_08170 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAH42_05590 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RAH42_08180 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D RAH42_08425 GDSL-type esterase/lipase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RAH42_01585 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAH42_10500 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAH42_08185 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RAH42_06265 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RAH42_06020 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pyy01008]
D RAH42_12590 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:pyy01006]
D RAH42_06500 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RAH42_06590 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RAH42_06970 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:pyy01007]
D RAH42_06725 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAH42_09390 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAH42_07995 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RAH42_09685 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RAH42_03580 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAH42_11145 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RAH42_09890 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RAH42_06660 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAH42_09315 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAH42_05305 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAH42_04940 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAH42_01590 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RAH42_04935 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RAH42_07610 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RAH42_07605 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RAH42_09655 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RAH42_11400 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RAH42_06445 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAH42_06995 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAH42_11305 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAH42_06400 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAH42_06395 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RAH42_00435 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_02875 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03685 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_07545 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAH42_03045 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAH42_06465 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RAH42_02675 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pyy03000]
D RAH42_09225 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D RAH42_06905 LysR family transcriptional regulator K05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator
D RAH42_03670 LysR family transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D RAH42_08235 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAH42_02225 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RAH42_01715 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RAH42_01720 FCD domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RAH42_12040 FadR/GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RAH42_02665 FCD domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RAH42_00985 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D RAH42_12270 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D RAH42_10295 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D RAH42_06250 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RAH42_06285 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D RAH42_11460 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D RAH42_07345 metalloregulator ArsR/SmtB family transcription factor K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D RAH42_11320 metalloregulator ArsR/SmtB family transcription factor K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D RAH42_00235 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RAH42_07475 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RAH42_08535 phosphoribosyltransferase family protein K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D RAH42_00380 sugar diacid recognition domain-containing protein K02647 cdaR; carbohydrate diacid regulator
D RAH42_02460 sugar diacid recognition domain-containing protein K02647 cdaR; carbohydrate diacid regulator
D RAH42_08290 sugar diacid recognition domain-containing protein K02647 cdaR; carbohydrate diacid regulator
D RAH42_09385 sugar diacid recognition domain-containing protein K02647 cdaR; carbohydrate diacid regulator
D RAH42_11265 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D RAH42_05755 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D RAH42_09965 nikR; nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D RAH42_12070 metal-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RAH42_02280 PucR family transcriptional regulator ligand-binding domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D RAH42_06160 PucR family transcriptional regulator ligand-binding domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D RAH42_00780 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAH42_03510 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RAH42_06260 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D RAH42_02800 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RAH42_03560 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D RAH42_09135 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pyy03021]
D RAH42_04180 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RAH42_04010 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RAH42_04015 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RAH42_06705 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RAH42_07310 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor
D RAH42_09555 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RAH42_07015 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RAH42_03295 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RAH42_08680 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RAH42_10110 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C 03019 Messenger RNA biogenesis [BR:pyy03019]
D RAH42_05165 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RAH42_11165 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D RAH42_08155 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RAH42_08675 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RAH42_10935 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RAH42_05155 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D RAH42_06320 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RAH42_05865 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAH42_11270 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAH42_06455 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RAH42_05450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RAH42_03520 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAH42_08800 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAH42_09055 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:pyy03011]
D RAH42_06960 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D RAH42_07575 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RAH42_04075 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RAH42_05940 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RAH42_04130 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RAH42_03615 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RAH42_04025 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RAH42_04115 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RAH42_07830 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RAH42_04040 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RAH42_04175 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RAH42_04020 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RAH42_04170 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RAH42_04110 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RAH42_06460 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RAH42_10870 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RAH42_04090 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RAH42_03625 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RAH42_04065 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RAH42_09305 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RAH42_03550 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RAH42_03305 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RAH42_04060 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RAH42_04045 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RAH42_04050 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RAH42_04105 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RAH42_04120 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RAH42_03635 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RAH42_03310 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RAH42_03300 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RAH42_03315 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RAH42_07835 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RAH42_04095 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RAH42_04140 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RAH42_04080 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RAH42_04185 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RAH42_04125 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RAH42_10890 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RAH42_06405 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RAH42_07525 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RAH42_04070 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RAH42_04055 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RAH42_04100 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RAH42_07515 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RAH42_06510 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RAH42_04085 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RAH42_04135 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RAH42_03455 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RAH42_08195 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RAH42_03280 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RAH42_09290 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RAH42_06410 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RAH42_04165 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RAH42_07680 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:pyy03009]
D RAH42_08155 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RAH42_05165 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RAH42_07620 era; GTPase Era K03595 era; GTPase
D RAH42_07510 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D RAH42_09555 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RAH42_07015 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RAH42_03295 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RAH42_05860 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RAH42_01145 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RAH42_00770 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RAH42_09130 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RAH42_11150 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RAH42_06490 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RAH42_08125 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RAH42_09595 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RAH42_03935 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RAH42_02235 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RAH42_08060 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RAH42_06030 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RAH42_05150 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RAH42_09885 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RAH42_00870 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D RAH42_10880 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D RAH42_01125 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RAH42_03535 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RAH42_11165 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D RAH42_06990 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RAH42_06320 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RAH42_05980 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D RAH42_05820 GTPase K14540 rbgA; ribosome biogenesis GTPase A
D RAH42_06015 hflX; GTPase HflX K03665 hflX; GTPase
D RAH42_06525 GTPase K06948 yqeH; 30S ribosome assembly GTPase
D RAH42_03985 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RAH42_11235 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RAH42_09540 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D RAH42_09560 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D RAH42_07495 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D RAH42_07635 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D RAH42_07540 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D RAH42_05845 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D RAH42_08200 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pyy03016]
D RAH42_06190 HD domain-containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RAH42_06725 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAH42_11400 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RAH42_09890 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RAH42_09315 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAH42_11145 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RAH42_03580 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAH42_05305 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAH42_04940 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAH42_06995 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAH42_11305 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAH42_01590 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RAH42_06445 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAH42_09655 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RAH42_09685 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RAH42_06660 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAH42_04935 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RAH42_06400 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAH42_06395 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RAH42_09390 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAH42_07995 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RAH42_11230 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RAH42_03545 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RAH42_08225 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RAH42_04205 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RAH42_09530 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RAH42_03985 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RAH42_06970 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RAH42_12520 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RAH42_00860 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RAH42_02810 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RAH42_09285 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RAH42_07855 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RAH42_01110 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D RAH42_07610 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RAH42_07605 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RAH42_07340 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D RAH42_00375 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D RAH42_06830 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RAH42_05325 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RAH42_03540 MiaB/RimO family radical SAM methylthiotransferase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D RAH42_05775 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RAH42_10885 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RAH42_05440 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RAH42_08015 ATP-binding protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RAH42_05370 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RAH42_06535 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RAH42_01320 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RAH42_05340 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D RAH42_03980 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RAH42_08150 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RAH42_08085 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RAH42_10105 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RAH42_08090 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RAH42_08210 nucleotidyltransferase family protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D RAH42_06455 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pyy03012]
D RAH42_05350 translation initiation factor K03113 EIF1; translation initiation factor 1
D RAH42_09545 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RAH42_06415 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RAH42_07765 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RAH42_07570 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RAH42_03275 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RAH42_04035 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RAH42_04030 fusA; elongation factor G K02355 fusA; elongation factor G
D RAH42_08550 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D RAH42_03470 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RAH42_07560 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D RAH42_03475 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RAH42_07675 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RAH42_04160 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RAH42_07035 efp; elongation factor P K02356 efp; elongation factor P
D RAH42_02820 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:pyy03110]
D RAH42_00630 AAA family ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RAH42_05225 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RAH42_06255 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RAH42_06675 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RAH42_05760 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RAH42_03520 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAH42_08800 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAH42_03525 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RAH42_01175 DnaJ C-terminal domain-containing protein K05516 cbpA; curved DNA-binding protein
D RAH42_03515 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RAH42_08805 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D RAH42_05050 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RAH42_08140 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RAH42_07800 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RAH42_07795 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D RAH42_02680 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RAH42_03425 thioredoxin family protein K03671 TXN; thioredoxin
D RAH42_06245 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:pyy04131]
D RAH42_05165 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RAH42_09155 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RAH42_09040 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAH42_01650 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAH42_05935 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAH42_08400 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAH42_07375 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:pyy03032]
D RAH42_05975 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RAH42_06275 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RAH42_00840 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RAH42_03640 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RAH42_11280 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RAH42_03620 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAH42_08405 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAH42_00845 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAH42_09310 DNA-binding protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAH42_06070 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAH42_05085 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAH42_06850 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAH42_08410 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAH42_12565 histidine phosphatase family protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D RAH42_05815 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RAH42_06735 DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAH42_05290 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAH42_07445 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RAH42_01015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RAH42_05780 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pyy03036]
D RAH42_08155 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RAH42_05975 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RAH42_06275 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RAH42_01175 DnaJ C-terminal domain-containing protein K05516 cbpA; curved DNA-binding protein
D RAH42_00840 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RAH42_11160 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D RAH42_06040 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D RAH42_06035 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D RAH42_09070 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RAH42_08650 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D RAH42_09120 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RAH42_06515 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RAH42_09090 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D RAH42_08645 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RAH42_09065 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RAH42_07865 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RAH42_05235 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAH42_11900 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAH42_11195 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RAH42_11190 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RAH42_11185 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RAH42_10950 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D RAH42_04210 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RAH42_11215 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RAH42_11210 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RAH42_11180 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D RAH42_00775 AAA family ATPase K03496 parA; chromosome partitioning protein
D RAH42_01855 ParA family protein K03496 parA; chromosome partitioning protein
D RAH42_00780 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAH42_00860 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RAH42_00770 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RAH42_05775 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RAH42_05770 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D RAH42_06750 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D RAH42_06940 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D RAH42_02135 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D RAH42_06770 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D RAH42_06665 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
D RAH42_09045 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:pyy03400]
D RAH42_03165 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RAH42_07805 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RAH42_05430 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RAH42_00970 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RAH42_06090 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RAH42_06450 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RAH42_06595 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RAH42_11075 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RAH42_09510 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RAH42_03010 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RAH42_06205 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RAH42_01305 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RAH42_11240 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RAH42_05290 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAH42_06735 DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAH42_08130 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RAH42_08135 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RAH42_09675 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RAH42_03960 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAH42_07790 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAH42_04010 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RAH42_04015 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RAH42_04180 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RAH42_07665 helicase-related protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RAH42_06985 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RAH42_06375 Smr/MutS family protein K07456 mutS2; DNA mismatch repair protein MutS2
D RAH42_06975 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RAH42_07010 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RAH42_06505 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RAH42_08405 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAH42_00845 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAH42_09310 DNA-binding protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAH42_06070 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAH42_05085 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAH42_06850 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAH42_08410 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAH42_03620 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAH42_01105 recA; recombinase RecA K03553 recA; recombination protein RecA
D RAH42_06550 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RAH42_06545 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RAH42_06555 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RAH42_04995 AAA family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D RAH42_04990 exonuclease SbcCD subunit D C-terminal domain-containing protein K03547 sbcD; DNA repair protein SbcD/Mre11
D RAH42_09320 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RAH42_00850 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RAH42_03405 ATP-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAH42_07255 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAH42_07275 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAH42_08910 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAH42_07615 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RAH42_09585 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D RAH42_06480 DNA recombination protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RAH42_04795 UvrD-helicase domain-containing protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RAH42_00150 cas1c; type I-C CRISPR-associated endonuclease Cas1c K15342 cas1; CRISP-associated protein Cas1
D RAH42_00280 cas1e; type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1
D RAH42_07445 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RAH42_01015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RAH42_05780 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RAH42_05975 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RAH42_06275 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RAH42_05865 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAH42_02465 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RAH42_09175 S24 family peptidase K01356 lexA; repressor LexA [EC:3.4.21.88]
D RAH42_10940 regulatory protein RecX K03565 recX; regulatory protein
D RAH42_09295 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RAH42_07705 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAH42_09535 DHH family phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:pyy03029]
D RAH42_09545 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RAH42_06415 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RAH42_07570 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RAH42_03275 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RAH42_04035 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RAH42_04030 fusA; elongation factor G K02355 fusA; elongation factor G
D RAH42_07620 era; GTPase Era K03595 era; GTPase
D RAH42_09390 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAH42_09315 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAH42_04940 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAH42_03580 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAH42_05280 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAH42_05275 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RAH42_05285 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RAH42_03620 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAH42_05610 BamA/TamA family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D RAH42_03520 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAH42_03515 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RAH42_08800 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAH42_08805 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D RAH42_03525 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RAH42_09275 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pyy02000]
D RAH42_00300 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D RAH42_06695 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D RAH42_00295 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D RAH42_06700 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D RAH42_05555 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RAH42_00355 ABC transporter ATP-binding protein K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D RAH42_00350 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_00690 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_00700 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_01530 NrtA/SsuA/CpmA family ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_05895 NrtA/SsuA/CpmA family ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAH42_00675 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D RAH42_01510 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RAH42_00195 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAH42_00950 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAH42_01260 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAH42_01675 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAH42_05900 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAH42_12435 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAH42_00940 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAH42_01255 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAH42_01670 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAH42_05905 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAH42_12430 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAH42_00935 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAH42_00945 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAH42_01250 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAH42_01665 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAH42_05910 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAH42_12425 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAH42_04690 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RAH42_04695 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D RAH42_04700 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RAH42_00345 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RAH42_00670 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RAH42_01515 ATP-binding cassette domain-containing protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RAH42_02935 substrate-binding domain-containing protein K10549 alsB; D-allose transport system substrate-binding protein
D RAH42_02940 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RAH42_02930 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RAH42_01195 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RAH42_01595 substrate-binding domain-containing protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D RAH42_01605 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D RAH42_05950 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D RAH42_05955 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D RAH42_01600 ATP-binding cassette domain-containing protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAH42_02925 ATP-binding cassette domain-containing protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAH42_05960 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAH42_03215 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RAH42_08335 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D RAH42_03210 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D RAH42_08340 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RAH42_03205 ABC transporter permease subunit K02038 pstA; phosphate transport system permease protein
D RAH42_08345 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RAH42_03200 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAH42_08350 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAH42_04350 transporter substrate-binding domain-containing protein K10036 glnH; glutamine transport system substrate-binding protein
D RAH42_09405 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D RAH42_01065 transporter substrate-binding domain-containing protein K09996 artJ; arginine transport system substrate-binding protein
D RAH42_11690 transporter substrate-binding domain-containing protein K09996 artJ; arginine transport system substrate-binding protein
D RAH42_10905 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RAH42_12350 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RAH42_03075 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RAH42_06185 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RAH42_04355 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D RAH42_09400 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D RAH42_04360 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D RAH42_01975 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAH42_02010 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAH42_12730 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAH42_01970 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAH42_02015 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAH42_12725 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAH42_01965 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAH42_02020 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAH42_12720 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAH42_01960 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAH42_02025 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAH42_12715 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAH42_01955 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAH42_02030 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAH42_12710 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAH42_01235 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D RAH42_01230 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RAH42_01225 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D RAH42_11465 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D RAH42_11470 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D RAH42_11475 ATP-binding cassette domain-containing protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D RAH42_03355 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RAH42_03360 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RAH42_03365 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RAH42_10370 ABC transporter substrate-binding protein/permease K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RAH42_03370 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D RAH42_10900 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D RAH42_12345 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D RAH42_03375 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D RAH42_10895 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D RAH42_12340 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D RAH42_10375 ABC transporter substrate-binding protein/permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RAH42_10365 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RAH42_09760 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RAH42_09740 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RAH42_09745 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RAH42_09750 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RAH42_09755 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RAH42_00510 ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D RAH42_09775 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D RAH42_01805 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_01810 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_02060 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_02200 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_03485 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_04255 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_04275 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_04285 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_04680 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_09785 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_10035 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_12765 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAH42_00490 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_01835 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_02035 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_02205 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_03490 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_04290 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_04675 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_05180 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_09780 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_10040 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_12760 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAH42_00495 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_01830 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_02045 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_02210 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_03495 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_04295 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_04670 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_05185 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_10045 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_12755 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAH42_01825 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_02050 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_02215 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_03500 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_04300 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_04665 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_05190 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_09770 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_10050 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_12750 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_00500 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAH42_00505 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_01820 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_02055 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_02220 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_03505 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_04305 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_04660 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_05195 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_10055 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_12745 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAH42_10475 ABC transporter ATP-binding protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D RAH42_04820 ABC transporter ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D RAH42_10480 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D RAH42_00595 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RAH42_00600 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RAH42_01365 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RAH42_01370 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RAH42_04835 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RAH42_05395 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RAH42_10470 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RAH42_12370 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RAH42_00590 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RAH42_01360 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RAH42_04840 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RAH42_05390 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RAH42_12365 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RAH42_00585 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RAH42_01355 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RAH42_05385 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RAH42_12360 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RAH42_10080 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D RAH42_11670 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D RAH42_10090 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D RAH42_11660 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D RAH42_10085 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RAH42_11665 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RAH42_11350 CbiQ family ECF transporter T component K02008 cbiQ; cobalt/nickel transport system permease protein
D RAH42_11345 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D RAH42_11355 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RAH42_09905 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D RAH42_11335 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D RAH42_11340 hypothetical protein K16915 cbiL; nickel transport protein
D RAH42_11300 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RAH42_04200 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D RAH42_04190 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RAH42_04195 ATP-binding cassette domain-containing protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RAH42_02970 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D RAH42_07135 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D RAH42_07140 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RAH42_05575 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D RAH42_10130 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RAH42_02975 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D RAH42_08645 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RAH42_08650 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D RAH42_04450 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RAH42_04455 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RAH42_04475 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RAH42_11045 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RAH42_04460 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAH42_04480 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAH42_11050 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAH42_02705 hypothetical protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RAH42_02710 ATP-binding cassette domain-containing protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RAH42_10360 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RAH42_02390 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D RAH42_01000 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RAH42_01055 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RAH42_01800 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RAH42_01980 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RAH42_06230 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RAH42_06290 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RAH42_09765 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RAH42_09970 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RAH42_10015 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RAH42_10220 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RAH42_12610 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RAH42_12465 OFA family MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D RAH42_07375 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D RAH42_08810 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RAH42_01060 aquaporin K06188 aqpZ; aquaporin Z
D RAH42_05005 NAD-binding protein K10716 kch; voltage-gated potassium channel
D RAH42_05010 potassium channel family protein K10716 kch; voltage-gated potassium channel
D RAH42_01020 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D RAH42_03900 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D RAH42_03905 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D RAH42_07625 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RAH42_07630 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RAH42_04540 TolC family protein K12340 tolC; outer membrane protein
D RAH42_11060 TolC family protein K12340 tolC; outer membrane protein
D RAH42_10520 TolC family protein K12340 tolC; outer membrane protein
D RAH42_05610 BamA/TamA family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D RAH42_01330 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D RAH42_03175 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D RAH42_11905 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAH42_11115 EamA family transporter K03298 TC.DME; drug/metabolite transporter, DME family
D RAH42_02895 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D RAH42_01750 L-lactate permease K03303 lutP; lactate permease
D RAH42_09980 BCCT family transporter K05020 opuD; glycine betaine transporter
D RAH42_09365 sodium:solute symporter family protein K14392 panF; sodium/pantothenate symporter
D RAH42_11005 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D RAH42_00090 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D RAH42_06885 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D RAH42_09725 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D RAH42_10330 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D RAH42_11995 hypothetical protein K03312 gltS; glutamate:Na+ symporter, ESS family
D RAH42_12995 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D RAH42_01205 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D RAH42_02400 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D RAH42_03720 Na+/H+ antiporter NhaC family protein K03315 nhaC; Na+:H+ antiporter, NhaC family
D RAH42_04235 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D RAH42_12400 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D RAH42_12405 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RAH42_07550 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RAH42_08885 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RAH42_05920 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D RAH42_01535 chromate transporter K07240 chrA; chromate transporter
D RAH42_01540 chromate transporter K07240 chrA; chromate transporter
D RAH42_04810 chromate transporter K07240 chrA; chromate transporter
D RAH42_04815 chromate transporter K07240 chrA; chromate transporter
D RAH42_08325 chromate transporter K07240 chrA; chromate transporter
D RAH42_08330 chromate transporter K07240 chrA; chromate transporter
D RAH42_12045 dctP; TRAP transporter substrate-binding protein DctP K11688 dctP; C4-dicarboxylate-binding protein DctP
D RAH42_02760 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D RAH42_02765 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RAH42_08445 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RAH42_00760 TRAP transporter large permease subunit K21393 yiaN; TRAP-type transport system large permease protein
D RAH42_09410 TRAP transporter large permease K21393 yiaN; TRAP-type transport system large permease protein
D RAH42_08450 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein
D RAH42_09415 TRAP transporter small permease subunit K21394 yiaM; TRAP-type transport system small permease protein
D RAH42_01890 DctP family TRAP transporter solute-binding subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D RAH42_02540 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D RAH42_02755 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D RAH42_07405 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D RAH42_08455 DctP family TRAP transporter solute-binding subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D RAH42_09425 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein
D RAH42_11705 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D RAH42_01200 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D RAH42_08715 Na/Pi symporter K03324 yjbB; phosphate:Na+ symporter
D RAH42_09155 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RAH42_03855 MnhB domain-containing protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D RAH42_03860 cation:proton antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D RAH42_03865 proton-conducting transporter membrane subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D RAH42_03830 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D RAH42_03835 monovalent cation/H+ antiporter complex subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D RAH42_03840 mnhG; monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D RAH42_03270 lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RAH42_10120 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RAH42_00715 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D RAH42_08255 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D RAH42_00465 LysE family transporter K11249 eamB; cysteine/O-acetylserine efflux protein
D RAH42_00520 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_02640 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_03115 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_08720 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_11635 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_11775 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_12410 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAH42_02645 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAH42_03120 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAH42_11630 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAH42_12415 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAH42_08725 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAH42_00530 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAH42_02650 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAH42_11625 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAH42_12420 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAH42_09520 ECF transporter S component K23675 fmnP; riboflavin transporter
D RAH42_03925 thiT; energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter
D RAH42_09090 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D RAH42_02695 manganese efflux pump K23242 mntP; manganese efflux pump family protein
D RAH42_04430 FTR1 family protein K07243 FTR; high-affinity iron transporter
D RAH42_04440 iron transporter K07230 p19; periplasmic iron binding protein
D RAH42_11285 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D RAH42_00735 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RAH42_08305 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RAH42_06620 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RAH42_06625 OadG family transporter subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RAH42_03145 mdcA; malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D RAH42_05235 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAH42_11900 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAH42_09920 FeoA family protein K04758 feoA; ferrous iron transport protein A
D RAH42_09925 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D RAH42_09915 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D RAH42_11545 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:pyy02044]
D RAH42_04540 TolC family protein K12340 tolC; outer membrane protein
D RAH42_11060 TolC family protein K12340 tolC; outer membrane protein
D RAH42_10520 TolC family protein K12340 tolC; outer membrane protein
D RAH42_07085 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RAH42_07945 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RAH42_07065 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
D RAH42_07045 secretin N-terminal domain-containing protein K02666 pilQ; type IV pilus assembly protein PilQ
D RAH42_07080 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D RAH42_07075 type II secretion system F family protein K12278 mshG; MSHA biogenesis protein MshG
D RAH42_05320 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D RAH42_07370 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RAH42_05315 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D RAH42_03570 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAH42_11255 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RAH42_03290 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RAH42_11250 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RAH42_07845 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RAH42_04145 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RAH42_10865 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RAH42_06060 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RAH42_06140 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAH42_11260 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAH42_09275 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:pyy02042]
D RAH42_00680 TDT family transporter K11041 eta; exfoliative toxin A/B
D RAH42_07625 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RAH42_07630 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:pyy02022]
D RAH42_08365 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RAH42_08360 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D RAH42_10240 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D RAH42_04905 response regulator K11615 malR; two-component system, CitB family, response regulator MalR
D RAH42_04900 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D RAH42_00820 response regulator K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:pyy02035]
D RAH42_10905 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RAH42_12350 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RAH42_07080 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D RAH42_07945 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RAH42_07045 secretin N-terminal domain-containing protein K02666 pilQ; type IV pilus assembly protein PilQ
D RAH42_07065 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pyy04812]
D RAH42_08840 amrA; AmmeMemoRadiSam system protein A K06990 MEMO1; MEMO1 family protein
D RAH42_04210 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RAH42_11215 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RAH42_09065 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RAH42_09070 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RAH42_11195 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RAH42_11190 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RAH42_11185 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RAH42_00775 AAA family ATPase K03496 parA; chromosome partitioning protein
D RAH42_01855 ParA family protein K03496 parA; chromosome partitioning protein
D RAH42_00780 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pyy04147]
D RAH42_11270 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAH42_09040 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAH42_09035 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RAH42_08400 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAH42_08800 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAH42_03520 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAH42_08020 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAH42_11535 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RAH42_03275 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RAH42_04035 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RAH42_05165 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RAH42_03545 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RAH42_01585 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAH42_10500 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAH42_12325 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAH42_07005 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAH42_04150 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RAH42_08880 phosphoribosyltransferase family protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RAH42_04340 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAH42_03070 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RAH42_01875 dihydroorotase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAH42_02575 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAH42_08830 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAH42_10410 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RAH42_01995 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAH42_05255 NAD(P)-dependent oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAH42_09735 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAH42_08610 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RAH42_02125 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_08435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAH42_04420 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D RAH42_05890 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAH42_05265 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RAH42_01650 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAH42_05935 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:pyy02048]
D RAH42_00150 cas1c; type I-C CRISPR-associated endonuclease Cas1c K15342 cas1; CRISP-associated protein Cas1
D RAH42_00280 cas1e; type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1
D RAH42_00145 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D RAH42_00285 cas2e; type I-E CRISPR-associated endoribonuclease Cas2e K09951 cas2; CRISPR-associated protein Cas2
D RAH42_00175 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RAH42_00250 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RAH42_11435 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RAH42_00155 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D RAH42_00165 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1
D RAH42_11425 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1
D RAH42_00160 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2
D RAH42_11420 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2
D RAH42_00170 cas5c; type I-C CRISPR-associated protein Cas5c K19119 cas5d; CRISPR-associated protein Cas5d
D RAH42_11430 cas5c; type I-C CRISPR-associated protein Cas5c K19119 cas5d; CRISPR-associated protein Cas5d
D RAH42_00255 type I-E CRISPR-associated protein Cse1/CasA K19123 casA; CRISPR system Cascade subunit CasA
D RAH42_00265 cas7e; type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC
D RAH42_00270 cas5e; type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD
D RAH42_00275 type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE
D RAH42_12220 cmr1; type III-B CRISPR module RAMP protein Cmr1 K07061 cmr1; CRISPR-associated protein Cmr1
D RAH42_12215 cas10; type III-B CRISPR-associated protein Cas10/Cmr2 K19076 cmr2; CRISPR-associated protein Cmr2
D RAH42_12205 type III-B CRISPR module-associated Cmr3 family protein K09127 cmr3; CRISPR-associated protein Cmr3
D RAH42_12200 cmr4; type III-B CRISPR module RAMP protein Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4
D RAH42_12195 type III-B CRISPR module-associated protein Cmr5 K19141 cmr5; CRISPR-associated protein Cmr5
D RAH42_12190 cmr6; type III-B CRISPR module RAMP protein Cmr6 K19142 cmr6; CRISPR-associated protein Cmr6
D RAH42_10780 crn3; CRISPR-associated ring nuclease Crn3/Csx3 K19144 csx3; CRISPR-associated protein Csx3
D RAH42_13150 crn3; CRISPR-associated ring nuclease Crn3/Csx3 K19144 csx3; CRISPR-associated protein Csx3
D RAH42_11390 DpnI domain-containing protein K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D RAH42_05700 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D RAH42_11085 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D RAH42_04555 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D RAH42_07235 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D RAH42_07985 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D RAH42_03250 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D RAH42_04560 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D RAH42_06775 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D RAH42_07240 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D RAH42_07980 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D RAH42_03245 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D RAH42_03260 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein
D RAH42_09065 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RAH42_04210 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RAH42_11215 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RAH42_06725 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:pyy01504]
D RAH42_04235 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D RAH42_11540 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAH42_05235 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAH42_11900 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAH42_11905 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAH42_04540 TolC family protein K12340 tolC; outer membrane protein
D RAH42_11060 TolC family protein K12340 tolC; outer membrane protein
D RAH42_10520 TolC family protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RAH42_08465 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D RAH42_08460 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D RAH42_06900 iorA; indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D RAH42_06895 indolepyruvate oxidoreductase subunit beta K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D RAH42_04410 acyl-CoA dehydrogenase family protein K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-]
D RAH42_11990 NAD/NADP octopine/nopaline dehydrogenase family protein K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D RAH42_12060 NAD/NADP octopine/nopaline dehydrogenase family protein K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D RAH42_02965 NAD(P)/FAD-dependent oxidoreductase K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3]
D RAH42_00740 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RAH42_08115 msrA; peptide-methionine (S)-S-oxide reductase MsrA K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D RAH42_03190 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RAH42_09380 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D RAH42_03885 nickel-dependent hydrogenase large subunit K18016 mbhL; membrane-bound hydrogenase subunit alpha [EC:1.12.7.2]
D RAH42_03880 NADH-quinone oxidoreductase subunit C K18017 mbhK; membrane-bound hydrogenase subunit beta [EC:1.12.7.2]
D RAH42_03875 NADH-quinone oxidoreductase subunit B family protein K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2]
D RAH42_01170 class II SORL domain-containing protein K05919 dfx; superoxide reductase [EC:1.15.1.2]
D RAH42_08995 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D RAH42_08025 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RAH42_01950 grdA; glycine/sarcosine/betaine reductase complex selenoprotein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D RAH42_00385 glycine/sarcosine/betaine reductase component B subunit K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D RAH42_01735 glycine/sarcosine/betaine reductase component B subunit K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D RAH42_03435 glycine/sarcosine/betaine reductase component B subunit K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D RAH42_09990 glycine/sarcosine/betaine reductase component B subunit K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D RAH42_12460 glycine/sarcosine/betaine reductase component B subunit K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D RAH42_00390 glycine/betaine/sarcosine/D-proline family reductase selenoprotein B K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D RAH42_01730 glycine/betaine/sarcosine/D-proline family reductase selenoprotein B K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D RAH42_01740 glycine/betaine/sarcosine/D-proline family reductase selenoprotein B K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D RAH42_03440 grdB; glycine reductase complex selenoprotein B K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D RAH42_12455 glycine/betaine/sarcosine/D-proline family reductase selenoprotein B K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D RAH42_05380 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D RAH42_05375 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D RAH42_09985 glycine/betaine/sarcosine/D-proline family reductase selenoprotein B K21579 grdH; betaine reductase complex component B subunit beta [EC:1.21.4.4]
D RAH42_01755 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D RAH42_08835 amrS; AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RAH42_09030 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RAH42_09025 glycosyltransferase K19427 epsJ; glycosyltransferase EpsJ [EC:2.4.-.-]
D RAH42_11455 larB; nickel pincer cofactor biosynthesis protein LarB K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D RAH42_02885 four-carbon acid sugar kinase family protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D RAH42_05795 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RAH42_07600 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RAH42_10750 DNA polymerase K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D RAH42_13120 DNA polymerase K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D RAH42_08395 cdaA; diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D RAH42_07330 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RAH42_07875 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RAH42_07640 HDIG domain-containing protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D RAH42_03975 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RAH42_02525 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D RAH42_06955 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RAH42_02190 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RAH42_11700 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RAH42_12385 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D RAH42_08095 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RAH42_01550 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D RAH42_11445 larE; ATP-dependent sacrificial sulfur transferase LarE K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D RAH42_12685 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K26365 cangL; canavanine-gamma-lyase [EC:4.4.1.43]
D RAH42_05520 LarC family nickel insertion protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D RAH42_11450 LarC family nickel insertion protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D RAH42_07770 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D RAH42_07490 Mur ligase family protein K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-]
D RAH42_02160 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D RAH42_02165 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D RAH42_02140 RnfABCDGE type electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D RAH42_11330 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D RAH42_08530 ferredoxin K05337 fer; ferredoxin
D RAH42_08975 ferredoxin K05337 fer; ferredoxin
D RAH42_02155 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D RAH42_02150 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D RAH42_02145 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D RAH42_10340 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D RAH42_08980 MBL fold metallo-hydrolase K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D RAH42_00230 flavodoxin K03839 fldA; flavodoxin I
D RAH42_04415 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RAH42_10960 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RAH42_08005 lysylphosphatidylglycerol synthase transmembrane domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D RAH42_04895 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RAH42_06720 cold-shock protein K03704 cspA; cold shock protein
D RAH42_07735 Tex family protein K06959 tex; protein Tex
D RAH42_06005 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D RAH42_05740 S1 RNA-binding domain-containing protein K07571 K07571; S1 RNA binding domain protein
D RAH42_07365 MBL fold metallo-hydrolase RNA specificity domain-containing protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D RAH42_06685 tig; trigger factor K03545 tig; trigger factor
D RAH42_07965 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D RAH42_03420 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D RAH42_03415 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D RAH42_03410 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D RAH42_05445 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D RAH42_05805 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D RAH42_02470 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D RAH42_11220 JAB domain-containing protein K03630 radC; DNA repair protein RadC
D RAH42_11745 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D RAH42_05810 YraN family protein K07460 yraN; putative endonuclease
D RAH42_07380 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D RAH42_05800 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D RAH42_10705 terminase small subunit K07474 xtmA; phage terminase small subunit
D RAH42_05425 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D RAH42_02720 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAH42_03680 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAH42_04000 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAH42_06825 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAH42_07590 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAH42_08790 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAH42_09300 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAH42_10145 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAH42_11580 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAH42_12150 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAH42_12160 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAH42_00725 IS110 family transposase K07486 K07486; transposase
D RAH42_02545 IS110 family transposase K07486 K07486; transposase
D RAH42_04435 IS110 family transposase K07486 K07486; transposase
D RAH42_04625 IS110 family transposase K07486 K07486; transposase
D RAH42_05635 IS110 family transposase K07486 K07486; transposase
D RAH42_09195 IS110 family transposase K07486 K07486; transposase
D RAH42_09485 IS110 family transposase K07486 K07486; transposase
D RAH42_09820 IS110 family transposase K07486 K07486; transposase
D RAH42_10305 IS110 family transposase K07486 K07486; transposase
D RAH42_11605 IS110 family transposase K07486 K07486; transposase
D RAH42_00290 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RAH42_06640 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RAH42_08035 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RAH42_08870 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D RAH42_09590 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RAH42_02335 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RAH42_11875 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RAH42_05245 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D RAH42_00880 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D RAH42_01910 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D RAH42_11980 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D RAH42_00400 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RAH42_03400 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RAH42_11570 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RAH42_00640 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RAH42_02520 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RAH42_07925 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RAH42_00550 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D RAH42_09270 R3H domain-containing nucleic acid-binding protein K06346 jag; spoIIIJ-associated protein
D RAH42_01290 biotin-dependent carboxyltransferase family protein K06350 kipA; antagonist of KipI
C 99993 Cell motility
C 99995 Signaling proteins
D RAH42_08485 carbon starvation CstA family protein K06200 cstA; carbon starvation protein
D RAH42_06115 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D RAH42_07650 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D RAH42_09330 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D RAH42_07485 poly-gamma-glutamate biosynthesis protein PgsC/CapC K22116 capC; gamma-polyglutamate biosynthesis protein CapC
D RAH42_11055 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D RAH42_03445 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D RAH42_08355 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D RAH42_08710 PhoU domain-containing protein K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RAH42_06380 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D RAH42_11405 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RAH42_01560 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D RAH42_10355 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D RAH42_07920 LemA family protein K03744 lemA; LemA protein
D RAH42_12075 CreA family protein K05805 creA; CreA protein
D RAH42_06095 YchJ family protein K09858 K09858; SEC-C motif domain protein
D RAH42_04930 cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein
D RAH42_11915 AroM family protein K14591 aroM; protein AroM
C 99997 Function unknown
D RAH42_00310 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D RAH42_04505 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D RAH42_04780 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D RAH42_10595 hypothetical protein K06871 K06871; uncharacterized protein
D RAH42_12260 hypothetical protein K06885 K06885; uncharacterized protein
D RAH42_07715 DUF255 domain-containing protein K06888 K06888; uncharacterized protein
D RAH42_03970 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D RAH42_04215 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D RAH42_10875 KH domain-containing protein K06960 K06960; uncharacterized protein
D RAH42_01155 zinc metallopeptidase K06973 K06973; uncharacterized protein
D RAH42_11295 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D RAH42_00555 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D RAH42_10350 SufD family Fe-S cluster assembly protein K07033 K07033; uncharacterized protein
D RAH42_07460 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein
D RAH42_03110 amidohydrolase family protein K07045 K07045; uncharacterized protein
D RAH42_03320 amidohydrolase family protein K07045 K07045; uncharacterized protein
D RAH42_01005 aldo/keto reductase K07079 K07079; uncharacterized protein
D RAH42_07595 aldo/keto reductase K07079 K07079; uncharacterized protein
D RAH42_08965 aldo/keto reductase K07079 K07079; uncharacterized protein
D RAH42_04635 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RAH42_07725 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RAH42_09880 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RAH42_10210 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RAH42_12305 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RAH42_00320 permease K07089 K07089; uncharacterized protein
D RAH42_02085 permease K07089 K07089; uncharacterized protein
D RAH42_02305 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RAH42_04260 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RAH42_11840 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RAH42_09430 metallophosphoesterase family protein K07095 K07095; uncharacterized protein
D RAH42_09350 metallophosphoesterase K07098 K07098; uncharacterized protein
D RAH42_02850 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D RAH42_05365 yedE; YedE family putative selenium transporter K07112 K07112; uncharacterized protein
D RAH42_07775 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D RAH42_02480 hypothetical protein K07126 K07126; uncharacterized protein
D RAH42_07930 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D RAH42_01090 ATP-binding protein K07133 K07133; uncharacterized protein
D RAH42_03230 ATP-binding protein K07133 K07133; uncharacterized protein
D RAH42_07105 DUF4143 domain-containing protein K07133 K07133; uncharacterized protein
D RAH42_07245 ATP-binding protein K07133 K07133; uncharacterized protein
D RAH42_09490 ATP-binding protein K07133 K07133; uncharacterized protein
D RAH42_11035 ATP-binding protein K07133 K07133; uncharacterized protein
D RAH42_11360 AAA family ATPase K07133 K07133; uncharacterized protein
D RAH42_12740 FAD-binding protein K07137 K07137; uncharacterized protein
D RAH42_00315 DUF362 domain-containing protein K07138 K07138; uncharacterized protein
D RAH42_02385 DUF362 domain-containing protein K07138 K07138; uncharacterized protein
D RAH42_05250 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D RAH42_07440 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D RAH42_09280 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D RAH42_05735 DUF501 domain-containing protein K09009 K09009; uncharacterized protein
D RAH42_03555 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D RAH42_11855 UPF0182 family protein K09118 K09118; uncharacterized protein
D RAH42_09325 adenosine-specific kinase K09129 K09129; uncharacterized protein
D RAH42_02670 DUF401 family protein K09133 K09133; uncharacterized protein
D RAH42_11925 DUF917 family protein K09703 K09703; uncharacterized protein
D RAH42_10860 sigma-70 family RNA polymerase sigma factor K09787 K09787; uncharacterized protein
D RAH42_08630 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D RAH42_08820 DMT family protein K09922 K09922; uncharacterized protein
D RAH42_04520 YegP family protein K09946 K09946; uncharacterized protein
D RAH42_07435 phosphatidylglycerol lysyltransferase domain-containing protein K01163 K01163; uncharacterized protein
D RAH42_07520 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D RAH42_05515 ELM1/GtrOC1 family putative glycosyltransferase K07276 K07276; uncharacterized protein
D RAH42_09550 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024