+D GENES KO #

  KEGG Orthology (KO) - Qipengyuania citrea

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:qci00010] D NCF85_01525 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NCF85_03735 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NCF85_14155 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D NCF85_04950 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NCF85_06510 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NCF85_04930 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NCF85_04935 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NCF85_14315 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D NCF85_05425 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NCF85_12515 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NCF85_05680 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D NCF85_06440 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D NCF85_06435 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D NCF85_06180 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NCF85_04150 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_06165 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_07025 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D NCF85_07020 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D NCF85_00675 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NCF85_11890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NCF85_16625 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NCF85_04855 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NCF85_08045 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D NCF85_02650 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:qci00020] D NCF85_06565 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D NCF85_11425 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D NCF85_04430 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NCF85_04160 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D NCF85_04155 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D NCF85_04150 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_06165 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_07025 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D NCF85_07020 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D NCF85_04165 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NCF85_14370 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NCF85_07100 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NCF85_06780 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NCF85_07110 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NCF85_07105 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NCF85_14845 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D NCF85_12050 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NCF85_04170 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NCF85_02650 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NCF85_06440 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D NCF85_06435 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D NCF85_06180 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:qci00030] D NCF85_03735 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NCF85_01535 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NCF85_01195 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D NCF85_16915 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D NCF85_16220 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NCF85_04925 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NCF85_03285 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D NCF85_05345 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D NCF85_14150 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NCF85_16905 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NCF85_01530 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D NCF85_01520 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D NCF85_13710 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D NCF85_04950 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NCF85_14155 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] C 00040 Pentose and glucuronate interconversions [PATH:qci00040] D NCF85_04455 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NCF85_07665 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NCF85_16450 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NCF85_16220 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NCF85_07990 SMP-30/gluconolactonase/LRE family protein K14274 xylC; xylono-1,5-lactonase [EC:3.1.1.110] C 00051 Fructose and mannose metabolism [PATH:qci00051] D NCF85_00990 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NCF85_00985 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D NCF85_16925 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D NCF85_01620 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NCF85_04435 sugar phosphate nucleotidyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NCF85_14205 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D NCF85_14155 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D NCF85_04950 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NCF85_06510 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NCF85_05345 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D NCF85_02625 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:qci00052] D NCF85_08045 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D NCF85_11095 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NCF85_16450 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NCF85_01525 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NCF85_08000 Gfo/Idh/MocA family oxidoreductase K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48] D NCF85_08015 dgoD; galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D NCF85_08010 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D NCF85_08005 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D NCF85_10230 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D NCF85_15885 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D NCF85_15890 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:qci00053] D NCF85_04455 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NCF85_07665 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NCF85_04400 GDP-mannose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:qci00500] D NCF85_12190 HAD-IIB family hydrolase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14] D NCF85_10230 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D NCF85_15885 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D NCF85_15890 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D NCF85_16450 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NCF85_01015 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_01670 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_10225 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_10560 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_03600 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D NCF85_03590 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D NCF85_01525 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NCF85_03735 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NCF85_00990 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:qci00520] D NCF85_02210 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D NCF85_00990 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NCF85_02870 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NCF85_11750 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D NCF85_03170 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D NCF85_04680 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D NCF85_04685 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D NCF85_16455 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NCF85_02415 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NCF85_11595 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D NCF85_11600 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D NCF85_01525 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NCF85_16450 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NCF85_04455 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NCF85_07665 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NCF85_11095 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NCF85_04400 GDP-mannose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D NCF85_02625 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D NCF85_03735 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NCF85_00985 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D NCF85_16925 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D NCF85_14205 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D NCF85_01620 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NCF85_04435 sugar phosphate nucleotidyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] C 00620 Pyruvate metabolism [PATH:qci00620] D NCF85_04855 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NCF85_07025 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D NCF85_07020 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D NCF85_06440 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D NCF85_06435 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D NCF85_06180 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NCF85_04150 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_06165 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_16625 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D NCF85_00675 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NCF85_11890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NCF85_12515 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NCF85_04605 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NCF85_09065 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NCF85_09070 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NCF85_07575 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NCF85_05185 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D NCF85_16155 thiamine pyrophosphate-binding protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D NCF85_01915 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D NCF85_10360 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D NCF85_03345 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D NCF85_05480 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D NCF85_07485 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D NCF85_13160 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D NCF85_13460 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D NCF85_13790 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D NCF85_04170 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NCF85_14845 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D NCF85_12050 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NCF85_00150 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NCF85_02650 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NCF85_05680 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D NCF85_09555 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D NCF85_02115 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_04485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_06705 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_09855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_10305 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_15355 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_16570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_05175 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:qci00630] D NCF85_05015 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D NCF85_04855 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NCF85_09555 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D NCF85_04170 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NCF85_06565 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D NCF85_11425 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D NCF85_02115 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_04485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_06705 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_09855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_10305 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_15355 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_16570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_16475 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D NCF85_04540 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D NCF85_04570 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D NCF85_04535 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D NCF85_04555 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NCF85_00155 catalase K03781 katE; catalase [EC:1.11.1.6] D NCF85_11280 catalase K03781 katE; catalase [EC:1.11.1.6] D NCF85_06725 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D NCF85_01995 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D NCF85_03165 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D NCF85_02280 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NCF85_05340 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NCF85_01060 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D NCF85_01065 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D NCF85_01050 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NCF85_04150 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_06165 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_01055 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D NCF85_01520 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D NCF85_13855 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D NCF85_00465 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:qci00640] D NCF85_04855 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NCF85_04885 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D NCF85_04890 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D NCF85_04895 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D NCF85_04150 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_06165 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_01085 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NCF85_04605 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NCF85_09065 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NCF85_09070 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NCF85_07575 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NCF85_04570 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D NCF85_04535 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D NCF85_04540 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D NCF85_04555 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NCF85_14370 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NCF85_04165 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NCF85_01125 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00650 Butanoate metabolism [PATH:qci00650] D NCF85_02115 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_04485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_06705 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_09855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_10305 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_15355 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_16570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_13815 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D NCF85_10600 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D NCF85_01085 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NCF85_00380 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D NCF85_07255 alpha/beta fold hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D NCF85_16585 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D NCF85_16475 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D NCF85_07100 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NCF85_06780 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NCF85_07110 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NCF85_07105 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NCF85_09130 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NCF85_16620 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NCF85_07025 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D NCF85_07020 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D NCF85_11885 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D NCF85_11880 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D NCF85_07060 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D NCF85_05210 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NCF85_08595 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NCF85_13270 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NCF85_05200 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:qci00660] D NCF85_05210 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NCF85_08595 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NCF85_13270 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NCF85_05200 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NCF85_14370 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NCF85_04165 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NCF85_10160 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D NCF85_10170 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D NCF85_03800 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:qci00562] D NCF85_04985 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NCF85_14365 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NCF85_01125 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D NCF85_06510 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:qci00190] D NCF85_06695 ndhC; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D NCF85_06690 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D NCF85_06685 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D NCF85_06675 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D NCF85_06670 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D NCF85_06660 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D NCF85_06655 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D NCF85_06645 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D NCF85_06640 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D NCF85_06635 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D NCF85_06630 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D NCF85_06625 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D NCF85_06620 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D NCF85_06615 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D NCF85_07100 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NCF85_06780 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NCF85_07110 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NCF85_07105 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NCF85_14260 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D NCF85_14255 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D NCF85_14250 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D NCF85_09380 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D NCF85_16180 cytochrome C oxidase subunit IV family protein K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D NCF85_09370 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D NCF85_09390 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D NCF85_11995 ctaD; cytochrome c oxidase subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9] D NCF85_09395 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D NCF85_09375 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D NCF85_14885 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D NCF85_06000 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D NCF85_13390 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D NCF85_05995 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D NCF85_13385 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D NCF85_05990 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D NCF85_05985 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D NCF85_12000 cytochrome B K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5] D NCF85_16175 cytochrome c oxidase subunit 3 K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D NCF85_16170 cbb3-type cytochrome c oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D NCF85_16165 cytochrome ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D NCF85_05500 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D NCF85_11010 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D NCF85_05495 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D NCF85_11015 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D NCF85_11370 cytochrome c family protein K08738 CYC; cytochrome c D NCF85_03220 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D NCF85_03200 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NCF85_03215 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NCF85_03225 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D NCF85_03195 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NCF85_07515 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NCF85_07500 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NCF85_07505 ATPase K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NCF85_07510 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NCF85_12735 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D NCF85_03845 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:qci00680] D NCF85_00675 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NCF85_11890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NCF85_11875 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D NCF85_05340 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NCF85_05425 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NCF85_00150 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NCF85_04170 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NCF85_04950 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NCF85_14155 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D NCF85_04855 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NCF85_14315 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D NCF85_02495 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NCF85_02490 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NCF85_05220 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:qci00910] D NCF85_05160 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D NCF85_12275 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D NCF85_16335 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D NCF85_04080 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D NCF85_02280 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NCF85_16540 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NCF85_16535 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D NCF85_06395 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D NCF85_12115 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D NCF85_12125 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:qci00920] D NCF85_12100 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D NCF85_12095 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NCF85_10570 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NCF85_09905 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D NCF85_13365 bifunctional metallophosphatase/5'-nucleotidase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D NCF85_09915 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D NCF85_05510 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D NCF85_09940 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NCF85_03150 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NCF85_01135 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D NCF85_02345 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NCF85_05720 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NCF85_00315 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D NCF85_03825 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D NCF85_04770 AMP-binding protein K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D NCF85_05705 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D NCF85_14655 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:qci00061] D NCF85_04605 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NCF85_09065 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NCF85_09070 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NCF85_07575 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NCF85_08545 acyl carrier protein K02078 acpP; acyl carrier protein D NCF85_06865 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D NCF85_13920 acyl carrier protein K02078 acpP; acyl carrier protein D NCF85_07290 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NCF85_03365 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NCF85_08540 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NCF85_07115 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCF85_07285 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCF85_10505 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCF85_08730 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NCF85_14460 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NCF85_12445 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D NCF85_14525 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCF85_14910 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:qci00071] D NCF85_02115 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_04485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_06705 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_09855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_10305 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_15355 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_16570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_01085 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NCF85_10600 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D NCF85_00680 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_00695 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_09845 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_10270 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_12085 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_12640 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_10510 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_11180 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_09810 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D NCF85_14525 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCF85_14910 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCF85_16330 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D NCF85_00675 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NCF85_11890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NCF85_16625 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:qci00561] D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NCF85_01475 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D NCF85_03360 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D NCF85_03695 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NCF85_00280 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NCF85_00295 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NCF85_14535 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] C 00564 Glycerophospholipid metabolism [PATH:qci00564] D NCF85_09780 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D NCF85_00120 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D NCF85_03695 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NCF85_00280 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NCF85_00295 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NCF85_02170 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5] D NCF85_12470 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D NCF85_08755 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D NCF85_08795 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D NCF85_08800 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D NCF85_11310 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D NCF85_07655 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D NCF85_11140 phospholipase D-like domain-containing protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D NCF85_08580 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism D NCF85_11000 M1 family metallopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:qci01040] D NCF85_09635 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D NCF85_03010 thioesterase family protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D NCF85_10340 thioesterase family protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D NCF85_06170 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:qci00230] D NCF85_09605 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D NCF85_14150 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NCF85_16905 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NCF85_06975 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NCF85_14995 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D NCF85_03130 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NCF85_12455 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D NCF85_05235 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D NCF85_02885 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D NCF85_02880 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NCF85_03135 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D NCF85_14325 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D NCF85_14320 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D NCF85_02905 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D NCF85_07545 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NCF85_16230 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NCF85_14245 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D NCF85_01565 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NCF85_14265 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D NCF85_07050 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NCF85_03120 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NCF85_06280 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D NCF85_00430 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D NCF85_10390 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D NCF85_00425 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D NCF85_10385 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D NCF85_00420 paoA; aldehyde dehydrogenase iron-sulfur subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D NCF85_10380 2Fe-2S iron-sulfur cluster-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D NCF85_15920 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NCF85_00715 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D NCF85_15980 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NCF85_16010 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D NCF85_02835 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D NCF85_12040 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NCF85_03840 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D NCF85_11360 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D NCF85_02520 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NCF85_07325 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D NCF85_04075 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D NCF85_06330 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D NCF85_12100 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D NCF85_12095 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:qci00240] D NCF85_05385 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NCF85_07675 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NCF85_05380 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NCF85_01705 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NCF85_01710 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D NCF85_09290 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D NCF85_14920 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D NCF85_09400 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D NCF85_07555 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D NCF85_08770 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D NCF85_03120 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NCF85_06330 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D NCF85_02935 Maf family nucleotide pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D NCF85_14765 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D NCF85_06500 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D NCF85_07475 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D NCF85_01565 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NCF85_11120 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D NCF85_00110 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D NCF85_16020 hypothetical protein K01494 dcd; dCTP deaminase [EC:3.5.4.13] D NCF85_15980 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NCF85_16010 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D NCF85_05830 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D NCF85_11515 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NCF85_16900 thymidine phosphorylase family protein K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D NCF85_10040 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D NCF85_04880 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D NCF85_03555 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:qci00250] D NCF85_15960 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NCF85_02830 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D NCF85_02570 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D NCF85_11380 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D NCF85_06800 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NCF85_07770 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NCF85_12885 asparagine synthase-related protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NCF85_15495 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D NCF85_08140 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D NCF85_04295 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NCF85_02550 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NCF85_02520 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NCF85_07545 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NCF85_01705 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NCF85_09130 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NCF85_16620 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NCF85_16540 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NCF85_16535 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D NCF85_16335 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D NCF85_04080 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D NCF85_00115 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D NCF85_02280 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NCF85_05385 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NCF85_07675 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NCF85_05380 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NCF85_02880 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NCF85_02870 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NCF85_06975 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:qci00260] D NCF85_12460 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NCF85_07415 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NCF85_14165 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NCF85_02185 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D NCF85_09360 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D NCF85_14285 beta-eliminating lyase-related protein K01620 ltaE; threonine aldolase [EC:4.1.2.48] D NCF85_05340 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NCF85_14315 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D NCF85_02495 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NCF85_02490 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NCF85_05220 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D NCF85_03685 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D NCF85_01060 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D NCF85_01065 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D NCF85_01050 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NCF85_04150 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_06165 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_01055 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D NCF85_08795 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D NCF85_15905 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D NCF85_02245 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NCF85_03625 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NCF85_07570 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D NCF85_07565 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:qci00270] D NCF85_03150 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NCF85_01135 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D NCF85_02345 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NCF85_05720 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NCF85_08125 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NCF85_09935 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NCF85_01040 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NCF85_01030 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NCF85_10635 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D NCF85_12700 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D NCF85_00125 mtnP; S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D NCF85_14265 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D NCF85_10870 aromatic amino acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D NCF85_11045 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D NCF85_14665 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D NCF85_04665 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D NCF85_12460 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NCF85_07415 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NCF85_14165 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NCF85_00315 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D NCF85_03825 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D NCF85_04520 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCF85_06155 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCF85_09230 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D NCF85_06305 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D NCF85_09940 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NCF85_04170 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NCF85_15905 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D NCF85_02495 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NCF85_02490 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:qci00280] D NCF85_04520 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCF85_06155 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCF85_08705 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D NCF85_04885 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D NCF85_04890 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D NCF85_04895 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D NCF85_04150 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_06165 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_00680 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_00695 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_09845 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_10270 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_12085 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_12640 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_10510 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_11180 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NCF85_15560 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D NCF85_01085 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NCF85_04570 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D NCF85_04535 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D NCF85_04540 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D NCF85_04555 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NCF85_01080 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D NCF85_01125 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NCF85_01220 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D NCF85_15575 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D NCF85_11885 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D NCF85_11880 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D NCF85_02115 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_04485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_06705 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_09855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_10305 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_15355 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_16570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:qci00290] D NCF85_02245 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NCF85_03625 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NCF85_10160 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D NCF85_10170 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D NCF85_03800 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D NCF85_05210 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NCF85_08595 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NCF85_13270 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NCF85_05200 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NCF85_05195 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D NCF85_06895 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NCF85_04520 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCF85_06155 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCF85_08705 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D NCF85_05175 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:qci00300] D NCF85_14165 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NCF85_12460 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NCF85_07415 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NCF85_04360 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NCF85_10370 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NCF85_00890 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D NCF85_00665 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D NCF85_14020 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D NCF85_00870 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D NCF85_08615 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D NCF85_02540 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D NCF85_06850 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D NCF85_02380 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NCF85_02385 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:qci00310] D NCF85_04155 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D NCF85_04150 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_06165 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_09810 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D NCF85_01085 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NCF85_02115 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_04485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_06705 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_09855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_10305 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_15355 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_16570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_09130 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NCF85_16620 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:qci00220] D NCF85_14015 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D NCF85_04295 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NCF85_02550 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NCF85_02880 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NCF85_02280 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NCF85_16335 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D NCF85_04080 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D NCF85_04710 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D NCF85_16060 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D NCF85_02290 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D NCF85_14020 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:qci00330] D NCF85_16400 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12] D NCF85_11910 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D NCF85_03655 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D NCF85_03645 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NCF85_01795 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NCF85_04130 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NCF85_09565 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D NCF85_09570 N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D NCF85_09270 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D NCF85_07165 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D NCF85_00115 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D NCF85_07160 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NCF85_09865 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NCF85_07170 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D NCF85_06530 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D NCF85_02095 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D NCF85_08715 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D NCF85_09155 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D NCF85_11435 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] C 00340 Histidine metabolism [PATH:qci00340] D NCF85_03045 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D NCF85_02500 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D NCF85_00755 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D NCF85_05695 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D NCF85_00740 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D NCF85_00735 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D NCF85_00745 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D NCF85_00730 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D NCF85_00310 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NCF85_14140 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D NCF85_03040 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D NCF85_00460 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D NCF85_00470 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D NCF85_00455 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D NCF85_00450 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D NCF85_00465 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NCF85_03580 egtD; L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:qci00350] D NCF85_00310 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NCF85_10870 aromatic amino acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D NCF85_06450 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D NCF85_09815 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D NCF85_09820 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D NCF85_00675 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NCF85_11890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NCF85_16625 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D NCF85_09130 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NCF85_16620 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:qci00360] D NCF85_15340 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D NCF85_04550 enoyl-CoA hydratase-related protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D NCF85_01085 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NCF85_13815 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D NCF85_00310 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NCF85_10870 aromatic amino acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D NCF85_06450 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D NCF85_11475 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D NCF85_01795 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NCF85_04130 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NCF85_16330 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:qci00380] D NCF85_13860 tryptophan 2,3-dioxygenase family protein K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D NCF85_13855 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D NCF85_13850 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D NCF85_04155 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D NCF85_04150 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_06165 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_09810 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D NCF85_01085 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NCF85_02115 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_04485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_06705 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_09855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_10305 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_15355 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_16570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NCF85_01795 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NCF85_04130 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NCF85_00155 catalase K03781 katE; catalase [EC:1.11.1.6] D NCF85_11280 catalase K03781 katE; catalase [EC:1.11.1.6] D NCF85_11475 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:qci00400] D NCF85_03570 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NCF85_04585 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D NCF85_09060 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D NCF85_14770 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D NCF85_04590 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D NCF85_07465 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D NCF85_11460 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D NCF85_06520 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NCF85_06535 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D NCF85_06540 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D NCF85_07560 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D NCF85_06545 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D NCF85_07570 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D NCF85_07565 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NCF85_08950 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D NCF85_00305 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D NCF85_11375 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D NCF85_00310 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NCF85_10870 aromatic amino acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D NCF85_15340 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:qci00410] D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NCF85_14225 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D NCF85_01085 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NCF85_01125 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:qci00430] D NCF85_09670 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NCF85_14915 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NCF85_15495 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D NCF85_16335 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism D NCF85_05810 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:qci00450] D NCF85_08125 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NCF85_09935 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NCF85_01040 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NCF85_01030 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NCF85_10635 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D NCF85_11045 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D NCF85_14960 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D NCF85_03610 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D NCF85_07435 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D NCF85_13565 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D NCF85_13635 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D NCF85_12100 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D NCF85_12095 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NCF85_05820 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:qci00460] D NCF85_01015 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_01670 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_10225 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_10560 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_09670 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NCF85_14915 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NCF85_02570 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D NCF85_11380 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D NCF85_05340 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:qci00470] D NCF85_06205 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NCF85_02420 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NCF85_02880 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NCF85_03690 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D NCF85_02395 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NCF85_02830 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D NCF85_08615 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D NCF85_02540 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D NCF85_06850 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D NCF85_02175 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6] D NCF85_03770 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6] C 00480 Glutathione metabolism [PATH:qci00480] D NCF85_09670 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NCF85_14915 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NCF85_12070 hydantoinase B/oxoprolinase family protein K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] D NCF85_09230 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D NCF85_06305 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D NCF85_02300 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NCF85_03105 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NCF85_14270 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D NCF85_00855 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_03070 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_03390 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_04395 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_08990 glutathione binding-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_09485 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_09495 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_09510 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_11710 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_03765 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D NCF85_12825 NAD(P)/FAD-dependent oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D NCF85_04430 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NCF85_16915 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D NCF85_01535 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NCF85_06955 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D NCF85_04660 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D NCF85_03655 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:qci00515] D NCF85_03810 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:qci00514] D NCF85_03810 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:qci00540] D NCF85_11630 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D NCF85_11625 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D NCF85_11635 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:qci00541] D NCF85_16450 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NCF85_11095 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NCF85_04455 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NCF85_07665 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NCF85_04400 GDP-mannose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D NCF85_11520 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NCF85_11535 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NCF85_11525 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NCF85_11530 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D NCF85_00985 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D NCF85_16925 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D NCF85_01620 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NCF85_04435 sugar phosphate nucleotidyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NCF85_14205 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D NCF85_03170 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D NCF85_11595 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D NCF85_11600 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 00550 Peptidoglycan biosynthesis [PATH:qci00550] D NCF85_16455 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NCF85_02415 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NCF85_02410 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NCF85_07300 Mur ligase family protein K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NCF85_02395 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NCF85_02380 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NCF85_02420 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NCF85_02385 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NCF85_08760 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NCF85_15325 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NCF85_07005 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D NCF85_02390 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NCF85_02405 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NCF85_01820 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D NCF85_00925 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCF85_06755 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCF85_09445 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCF85_05585 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NCF85_02375 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NCF85_05835 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:qci00552] D NCF85_15325 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NCF85_07005 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:qci00543] D NCF85_07785 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D NCF85_03150 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:qci00730] D NCF85_00510 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D NCF85_11760 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D NCF85_02690 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_02695 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_12960 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_16245 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NCF85_14900 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D NCF85_04960 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D NCF85_03030 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D NCF85_15415 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NCF85_04075 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:qci00740] D NCF85_15405 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D NCF85_05445 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D NCF85_10840 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D NCF85_05440 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D NCF85_10845 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D NCF85_14335 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D NCF85_09605 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:qci00750] D NCF85_14445 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D NCF85_02490 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NCF85_03090 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D NCF85_09405 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D NCF85_09360 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:qci00760] D NCF85_15960 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NCF85_01455 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D NCF85_15040 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D NCF85_01565 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NCF85_14510 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D NCF85_06330 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D NCF85_03450 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D NCF85_04510 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D NCF85_06380 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D NCF85_11300 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D NCF85_07140 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D NCF85_00895 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D NCF85_04815 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D NCF85_02795 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D NCF85_02805 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D NCF85_02810 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D NCF85_09130 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NCF85_16620 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:qci00770] D NCF85_05210 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NCF85_08595 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NCF85_13270 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NCF85_05200 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NCF85_05195 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D NCF85_06895 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NCF85_05060 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D NCF85_14225 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D NCF85_06605 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D NCF85_11675 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D NCF85_06330 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D NCF85_05260 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D NCF85_14775 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D NCF85_09410 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D NCF85_04520 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCF85_06155 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:qci00780] D NCF85_08540 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NCF85_07115 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCF85_07285 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCF85_10505 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCF85_08730 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NCF85_14460 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NCF85_04800 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NCF85_13925 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NCF85_04790 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D NCF85_04795 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D NCF85_04560 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D NCF85_06610 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:qci00785] D NCF85_01425 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D NCF85_06390 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D NCF85_04150 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_06165 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_06440 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D NCF85_06435 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D NCF85_06180 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NCF85_04160 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D NCF85_04155 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D NCF85_04885 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D NCF85_04890 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D NCF85_04895 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D NCF85_01060 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D NCF85_01065 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D NCF85_01050 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NCF85_01055 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:qci00790] D NCF85_04650 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D NCF85_15415 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NCF85_15820 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D NCF85_16385 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D NCF85_09350 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D NCF85_11900 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D NCF85_02780 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D NCF85_14330 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D NCF85_07580 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D NCF85_15405 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D NCF85_05445 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D NCF85_15440 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D NCF85_02325 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D NCF85_15340 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D NCF85_01955 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NCF85_14000 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NCF85_09950 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D NCF85_01010 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D NCF85_04480 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D NCF85_09335 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D NCF85_06925 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D NCF85_16200 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:qci00670] D NCF85_14330 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D NCF85_16070 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D NCF85_05340 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NCF85_03130 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NCF85_16230 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NCF85_02585 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D NCF85_01050 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NCF85_01040 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NCF85_01030 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NCF85_04880 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D NCF85_01025 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D NCF85_04910 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:qci00860] D NCF85_03685 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D NCF85_06560 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCF85_12525 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCF85_14605 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D NCF85_09770 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D NCF85_06040 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D NCF85_09765 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D NCF85_14755 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D NCF85_11025 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D NCF85_05900 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D NCF85_05960 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D NCF85_07820 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D NCF85_12010 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D NCF85_14750 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D NCF85_00955 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D NCF85_02535 siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D NCF85_09925 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D NCF85_09380 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D NCF85_14885 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D NCF85_09450 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D NCF85_03290 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D NCF85_13820 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NCF85_01745 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:qci00130] D NCF85_09220 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D NCF85_12465 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D NCF85_09755 FAD-dependent monooxygenase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D NCF85_11700 class I SAM-dependent methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D NCF85_14480 demethoxyubiquinone hydroxylase family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D NCF85_06450 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:qci00900] D NCF85_16245 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NCF85_08750 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D NCF85_06370 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D NCF85_06905 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D NCF85_11395 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D NCF85_02190 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D NCF85_02115 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_04485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_06705 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_09855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_10305 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_15355 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_16570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_05255 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D NCF85_08945 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D NCF85_08760 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:qci00906] D NCF85_01225 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D NCF85_01235 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D NCF85_01240 crtY; lycopene beta-cyclase CrtY K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19] D NCF85_10150 beta-carotene hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:qci00907] D NCF85_01085 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D NCF85_04925 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:qci00523] D NCF85_11520 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NCF85_11535 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NCF85_11525 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NCF85_11530 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:qci01054] D NCF85_02830 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides D NCF85_05320 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics D NCF85_11535 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:qci00946] D NCF85_01015 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_01670 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_10225 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_10560 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D NCF85_07135 class A beta-lactamase-related serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D NCF85_08930 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D NCF85_12655 class A beta-lactamase-related serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:qci00332] D NCF85_07160 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NCF85_09865 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NCF85_07170 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:qci00261] D NCF85_12100 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D NCF85_12095 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NCF85_12460 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NCF85_07415 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NCF85_04360 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NCF85_10370 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NCF85_00890 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:qci00521] D NCF85_01525 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NCF85_04985 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NCF85_14365 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NCF85_11520 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NCF85_11535 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NCF85_11525 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NCF85_11530 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D NCF85_01525 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:qci00525] D NCF85_11520 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NCF85_11535 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:qci00401] D NCF85_00305 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D NCF85_00310 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NCF85_10870 aromatic amino acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis D NCF85_08025 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NCF85_08030 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NCF85_10530 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NCF85_10545 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NCF85_15875 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] C 00405 Phenazine biosynthesis D NCF85_06520 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NCF85_06535 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D NCF85_07290 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NCF85_07115 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCF85_07285 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCF85_10505 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCF85_14460 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D NCF85_08545 acyl carrier protein K02078 acpP; acyl carrier protein D NCF85_06865 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D NCF85_13920 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:qci00999] D NCF85_12700 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D NCF85_14770 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D NCF85_01015 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_01670 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_10225 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NCF85_10560 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:qci00362] D NCF85_10920 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D NCF85_10600 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D NCF85_09810 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D NCF85_01085 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NCF85_13815 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D NCF85_02115 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_04485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_06705 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_09855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_10305 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_15355 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_16570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:qci00627] D NCF85_01330 NAD(P)/FAD-dependent oxidoreductase K10215 ethA; monooxygenase [EC:1.14.13.-] D NCF85_01795 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NCF85_04130 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NCF85_01085 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:qci00364] D NCF85_12425 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D NCF85_14725 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:qci00625] D NCF85_16625 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D NCF85_00675 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NCF85_11890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NCF85_11170 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NCF85_00770 HAD-IA family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:qci00361] D NCF85_12425 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D NCF85_14725 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D NCF85_00770 HAD-IA family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:qci00623] D NCF85_12425 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D NCF85_14725 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:qci00633] D NCF85_01435 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:qci00643] D NCF85_09815 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D NCF85_09820 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D NCF85_01795 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NCF85_04130 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:qci00930] D NCF85_15365 acyl-CoA dehydrogenase family protein K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-] D NCF85_01085 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:qci00626] D NCF85_16625 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D NCF85_00675 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NCF85_11890 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:qci03020] D NCF85_12540 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NCF85_12535 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NCF85_04095 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NCF85_11145 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:qci03010] D NCF85_07480 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D NCF85_08785 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D NCF85_04000 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D NCF85_05315 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D NCF85_04055 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D NCF85_07310 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D NCF85_03950 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D NCF85_04040 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D NCF85_14875 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D NCF85_03965 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D NCF85_04090 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D NCF85_03945 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D NCF85_04085 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D NCF85_04035 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D NCF85_10025 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D NCF85_07445 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D NCF85_04015 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D NCF85_07315 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D NCF85_03990 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D NCF85_00915 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D NCF85_02015 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D NCF85_01310 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D NCF85_03985 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D NCF85_03970 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D NCF85_03975 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D NCF85_04030 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D NCF85_04045 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D NCF85_12575 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D NCF85_07320 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D NCF85_12570 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D NCF85_01305 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D NCF85_14880 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D NCF85_04020 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D NCF85_04065 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D NCF85_04005 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D NCF85_04100 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D NCF85_04050 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D NCF85_07425 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D NCF85_14120 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D NCF85_09320 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D NCF85_03995 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D NCF85_03980 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D NCF85_04025 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D NCF85_05655 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D NCF85_09315 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D NCF85_15020 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D NCF85_04010 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D NCF85_04060 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D NCF85_08725 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D NCF85_03355 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D NCF85_15425 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D NCF85_00805 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D NCF85_14125 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D NCF85_00765 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D NCF85_10670 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:qci00970] D NCF85_10680 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCF85_10720 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCF85_02460 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCF85_07455 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCF85_15115 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCF85_04630 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCF85_06475 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCF85_10410 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCF85_04810 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NCF85_04900 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NCF85_00405 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D NCF85_11355 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NCF85_04490 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NCF85_05135 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NCF85_05140 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NCF85_01145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NCF85_16095 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NCF85_08710 tRNA-His K14226 tRNA-His; tRNA His D NCF85_10685 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NCF85_10725 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NCF85_16295 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCF85_04995 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCF85_12400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCF85_00255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCF85_01785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCF85_11895 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NCF85_05575 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NCF85_10665 tRNA-Met K14230 tRNA-Met; tRNA Met D NCF85_10705 tRNA-Met K14230 tRNA-Met; tRNA Met D NCF85_08525 tRNA-Met K14230 tRNA-Met; tRNA Met D NCF85_09100 tRNA-Ile K14230 tRNA-Met; tRNA Met D NCF85_02920 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D NCF85_04875 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NCF85_09025 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NCF85_12025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NCF85_09985 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NCF85_00410 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NCF85_14305 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NCF85_09880 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NCF85_11770 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D NCF85_08885 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D NCF85_01695 tRNA-Val K14237 tRNA-Val; tRNA Val D NCF85_07650 tRNA-Val K14237 tRNA-Val; tRNA Val D NCF85_02565 tRNA-Val K14237 tRNA-Val; tRNA Val D NCF85_06560 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCF85_12525 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCF85_02035 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D NCF85_02045 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D NCF85_02030 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D NCF85_04405 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NCF85_08550 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NCF85_05670 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NCF85_05675 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NCF85_16390 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NCF85_01570 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NCF85_03305 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NCF85_05820 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NCF85_02585 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D NCF85_01960 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NCF85_16490 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NCF85_14340 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NCF85_09160 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D NCF85_02200 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NCF85_06195 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NCF85_12725 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NCF85_14105 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NCF85_14100 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NCF85_05735 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NCF85_11505 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:qci03060] D NCF85_04070 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NCF85_01275 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NCF85_06505 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NCF85_09015 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D NCF85_09010 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D NCF85_09020 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NCF85_00820 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NCF85_04725 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NCF85_11495 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NCF85_07450 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NCF85_08625 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NCF85_02225 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D NCF85_02230 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D NCF85_02235 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D NCF85_03730 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NCF85_09415 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NCF85_14345 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:qci04122] D NCF85_02690 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_02695 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_12960 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_09940 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NCF85_14420 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D NCF85_09335 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D NCF85_01010 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D NCF85_09340 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein D NCF85_00900 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D NCF85_04480 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D NCF85_06925 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] C 03050 Proteasome C 03018 RNA degradation [PATH:qci03018] D NCF85_07035 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D NCF85_06765 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D NCF85_05425 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NCF85_10020 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NCF85_03755 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D NCF85_06190 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NCF85_02975 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NCF85_15380 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NCF85_14745 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D NCF85_06600 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D NCF85_06240 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NCF85_12625 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NCF85_06340 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NCF85_03845 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NCF85_02725 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:qci03030] D NCF85_14780 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCF85_06950 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NCF85_08920 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NCF85_05825 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NCF85_16500 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NCF85_03110 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NCF85_07280 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NCF85_11135 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NCF85_05365 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D NCF85_08155 CHC2 zinc finger domain-containing protein K02316 dnaG; DNA primase [EC:2.7.7.101] D NCF85_08420 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_10795 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_13060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_02180 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NCF85_02750 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NCF85_12665 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NCF85_07145 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:qci03410] D NCF85_00885 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NCF85_15925 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NCF85_16520 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D NCF85_03435 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D NCF85_11705 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D NCF85_02335 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D NCF85_05085 UdgX family uracil-DNA binding protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D NCF85_06915 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D NCF85_14805 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NCF85_15410 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NCF85_12665 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NCF85_05145 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NCF85_07145 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:qci03420] D NCF85_04825 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NCF85_04245 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D NCF85_09735 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D NCF85_02960 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D NCF85_07615 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NCF85_12665 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NCF85_07145 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:qci03430] D NCF85_13795 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D NCF85_05605 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D NCF85_07615 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NCF85_15000 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D NCF85_05250 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D NCF85_05145 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NCF85_08420 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_10795 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_13060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_06950 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NCF85_07280 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NCF85_08920 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NCF85_16500 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NCF85_05825 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NCF85_14780 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCF85_03110 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NCF85_07145 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NCF85_04270 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:qci03440] D NCF85_05145 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NCF85_08420 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_10795 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_13060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_09630 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D NCF85_03795 recombination protein O N-terminal domain-containing protein K03584 recO; DNA repair protein RecO (recombination protein O) D NCF85_02590 recR; recombination mediator RecR K06187 recR; recombination protein RecR D NCF85_04390 recA; recombinase RecA K03553 recA; recombination protein RecA D NCF85_12665 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NCF85_11455 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NCF85_11445 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NCF85_12480 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D NCF85_04835 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NCF85_06950 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NCF85_07280 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NCF85_08920 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NCF85_16500 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NCF85_05825 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NCF85_14780 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCF85_03110 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NCF85_03270 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:qci03450] D NCF85_15985 Ku protein K10979 ku; DNA end-binding protein Ku D NCF85_15990 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:qci03250] D NCF85_07085 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:qci02010] D NCF85_15540 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D NCF85_15545 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D NCF85_07970 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NCF85_01975 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NCF85_12205 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NCF85_01965 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NCF85_01970 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NCF85_05120 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NCF85_05115 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D NCF85_05110 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D NCF85_05105 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D NCF85_08115 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D NCF85_08120 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein D NCF85_08130 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D NCF85_11550 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D NCF85_11555 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D NCF85_11560 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D NCF85_06970 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D NCF85_06965 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D NCF85_08700 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C D NCF85_02315 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D NCF85_02320 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D NCF85_00365 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D NCF85_00360 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D NCF85_12755 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D NCF85_00270 cell division protein K09811 ftsX; cell division transport system permease protein D NCF85_00265 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NCF85_10745 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D NCF85_11865 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB C 02060 Phosphotransferase system (PTS) [PATH:qci02060] D NCF85_02620 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D NCF85_02625 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D NCF85_01495 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] C 03070 Bacterial secretion system [PATH:qci03070] D NCF85_14835 TolC family outer membrane protein K12340 tolC; outer membrane protein D NCF85_09015 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D NCF85_09010 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D NCF85_01275 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NCF85_06505 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NCF85_04070 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NCF85_09020 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NCF85_00820 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NCF85_04725 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NCF85_08625 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NCF85_11495 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NCF85_07450 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NCF85_02225 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D NCF85_02230 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D NCF85_02235 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D NCF85_10455 TrbC/VirB2 family protein K03197 virB2; type IV secretion system protein VirB2 D NCF85_15120 TrbC/VirB2 family protein K03197 virB2; type IV secretion system protein VirB2 D NCF85_10450 VirB3 family type IV secretion system protein K03198 virB3; type IV secretion system protein VirB3 D NCF85_15155 VirB3 family type IV secretion system protein K03198 virB3; type IV secretion system protein VirB3 D NCF85_10435 TrbG/VirB9 family P-type conjugative transfer protein K03204 virB9; type IV secretion system protein VirB9 D NCF85_10440 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6 D NCF85_15145 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6 D NCF85_15140 VirB8/TrbF family protein K03203 virB8; type IV secretion system protein VirB8 D NCF85_10430 type VI secretion protein K03195 virB10; type IV secretion system protein VirB10 D NCF85_10445 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D NCF85_15150 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D NCF85_10425 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D NCF85_15125 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D NCF85_13000 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:qci02020] D NCF85_05130 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NCF85_05095 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NCF85_10495 response regulator transcription factor K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NCF85_15415 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NCF85_15820 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D NCF85_16385 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D NCF85_05120 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NCF85_00930 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D NCF85_13230 copper-binding protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D NCF85_13220 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D NCF85_13225 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein D NCF85_13360 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D NCF85_13355 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D NCF85_15610 flagellin FliC K02406 fliC; flagellin D NCF85_15715 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D NCF85_15750 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NCF85_15810 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NCF85_14885 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D NCF85_00910 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NCF85_02640 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D NCF85_02645 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D NCF85_10575 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D NCF85_14855 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR D NCF85_07660 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D NCF85_15105 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NCF85_14690 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NCF85_14685 spore coat protein U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NCF85_12590 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein D NCF85_14680 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein D NCF85_15840 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein D NCF85_14675 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein D NCF85_04615 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D NCF85_04620 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D NCF85_02160 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D NCF85_02155 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D NCF85_02145 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D NCF85_02865 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D NCF85_02140 type II secretion system F family protein K12510 tadB; tight adherence protein B D NCF85_02135 type II secretion system F family protein K12511 tadC; tight adherence protein C D NCF85_15520 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D NCF85_02285 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D NCF85_06360 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NCF85_06355 sigma-54 dependent transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D NCF85_02280 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NCF85_06350 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D NCF85_06345 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D NCF85_02115 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_04485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_06705 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_09855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_10305 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_15355 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_16570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_05795 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D NCF85_05800 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D NCF85_12760 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NCF85_01365 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NCF85_04745 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NCF85_03465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NCF85_05770 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NCF85_07335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NCF85_01380 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NCF85_01385 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NCF85_01375 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NCF85_01370 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NCF85_04740 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NCF85_13915 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D NCF85_04385 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D NCF85_01850 histidine phosphotransferase family protein K13588 chpT; histidine phosphotransferase ChpT D NCF85_12765 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D NCF85_07645 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR D NCF85_06135 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D NCF85_16840 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D NCF85_04285 helix-turn-helix transcriptional regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NCF85_06140 fixJ; response regulator FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NCF85_15705 LuxR C-terminal-related transcriptional regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NCF85_16845 response regulator transcription factor K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NCF85_15615 sigma 54-interacting transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NCF85_13950 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NCF85_14260 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D NCF85_14255 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D NCF85_14250 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D NCF85_11370 cytochrome c family protein K08738 CYC; cytochrome c D NCF85_06000 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D NCF85_13390 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D NCF85_05995 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D NCF85_13385 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D NCF85_05990 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D NCF85_05985 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D NCF85_05500 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D NCF85_11010 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D NCF85_05495 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D NCF85_11015 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D NCF85_14835 TolC family outer membrane protein K12340 tolC; outer membrane protein D NCF85_06845 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D NCF85_07700 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D NCF85_11610 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D NCF85_04845 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D NCF85_11595 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D NCF85_11600 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D NCF85_15735 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:qci04148] D NCF85_03655 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D NCF85_14260 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:qci02024] D NCF85_06340 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NCF85_06520 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NCF85_06535 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D NCF85_03570 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NCF85_13360 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D NCF85_13355 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D NCF85_04280 LuxR family transcriptional regulator K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1 D NCF85_12955 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D NCF85_12950 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC D NCF85_12945 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD D NCF85_12940 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D NCF85_12935 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D NCF85_12925 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D NCF85_12920 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D NCF85_12915 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D NCF85_15135 TrbG/VirB9 family P-type conjugative transfer protein K20532 trbG; type IV secretion system protein TrbG D NCF85_12910 conjugal transfer protein TraI K20533 trbI; type IV secretion system protein TrbI D NCF85_15130 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI D NCF85_14525 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCF85_14910 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCF85_13950 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NCF85_16240 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D NCF85_15405 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D NCF85_10840 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D NCF85_00200 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NCF85_13870 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D NCF85_00820 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NCF85_01275 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NCF85_06505 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NCF85_04070 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NCF85_09020 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NCF85_04725 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NCF85_08625 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NCF85_11495 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NCF85_07450 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:qci02030] D NCF85_03465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NCF85_05770 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NCF85_07335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NCF85_01385 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NCF85_01380 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NCF85_01375 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NCF85_01370 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NCF85_04740 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NCF85_01365 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NCF85_04745 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NCF85_15630 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D NCF85_15665 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NCF85_15750 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NCF85_15810 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NCF85_15815 OmpA family protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:qci02040] D NCF85_15620 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D NCF85_15625 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D NCF85_15630 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D NCF85_15635 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D NCF85_15640 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D NCF85_15655 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D NCF85_15665 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NCF85_15670 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D NCF85_15675 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D NCF85_15680 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D NCF85_15685 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D NCF85_15720 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D NCF85_15690 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB D NCF85_15740 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D NCF85_15755 flagellar basal body protein K02387 flgB; flagellar basal-body rod protein FlgB D NCF85_15760 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D NCF85_15770 flagellar hook basal-body protein K02390 flgE; flagellar hook protein FlgE D NCF85_15775 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D NCF85_15780 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D NCF85_15785 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D NCF85_15790 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D NCF85_15795 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ D NCF85_15800 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D NCF85_15805 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D NCF85_15610 flagellin FliC K02406 fliC; flagellin D NCF85_15695 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D NCF85_15750 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NCF85_15810 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NCF85_15815 OmpA family protein K02557 motB; chemotaxis protein MotB D NCF85_15735 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D NCF85_05360 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D NCF85_12760 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NCF85_15615 sigma 54-interacting transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NCF85_15715 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D NCF85_05425 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:qci04980] D NCF85_13820 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NCF85_04555 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NCF85_01040 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NCF85_01030 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:qci01501] D NCF85_07585 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D NCF85_02210 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D NCF85_07070 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1 D NCF85_07075 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D NCF85_07135 class A beta-lactamase-related serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D NCF85_08930 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D NCF85_12655 class A beta-lactamase-related serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D NCF85_00210 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NCF85_00205 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NCF85_00200 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NCF85_14835 TolC family outer membrane protein K12340 tolC; outer membrane protein D NCF85_00925 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCF85_06755 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCF85_09445 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCF85_05585 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NCF85_02375 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NCF85_07120 bla; subclass B3 metallo-beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:qci01502] D NCF85_02420 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NCF85_06205 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NCF85_02385 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NCF85_02390 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NCF85_02405 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:qci01503] D NCF85_02770 pre-peptidase C-terminal domain-containing protein K01406 prtC; serralysin [EC:3.4.24.40] D NCF85_06760 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NCF85_00930 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D NCF85_07085 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D NCF85_00210 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NCF85_00205 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NCF85_14835 TolC family outer membrane protein K12340 tolC; outer membrane protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:qci01000] C 01001 Protein kinases [BR:qci01001] D NCF85_12155 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D NCF85_13770 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NCF85_16735 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NCF85_07690 Wzz/FepE/Etk N-terminal domain-containing protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D NCF85_06835 capsular biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D NCF85_05130 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NCF85_13360 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D NCF85_02640 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D NCF85_14850 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D NCF85_06360 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NCF85_06350 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D NCF85_05795 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D NCF85_01385 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NCF85_04385 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D NCF85_06135 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D NCF85_16840 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D NCF85_00980 sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS C 01009 Protein phosphatases and associated proteins [BR:qci01009] D NCF85_04665 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D NCF85_05220 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:qci01002] D NCF85_14345 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D NCF85_02165 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D NCF85_15920 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NCF85_06975 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NCF85_16540 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NCF85_02870 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NCF85_06800 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NCF85_07770 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NCF85_12885 asparagine synthase-related protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NCF85_02710 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D NCF85_11410 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D NCF85_11000 M1 family metallopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] D NCF85_14270 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D NCF85_07375 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D NCF85_04210 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D NCF85_02770 pre-peptidase C-terminal domain-containing protein K01406 prtC; serralysin [EC:3.4.24.40] D NCF85_04235 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D NCF85_16595 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D NCF85_02070 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D NCF85_02895 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D NCF85_03565 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D NCF85_02300 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NCF85_03105 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NCF85_00640 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D NCF85_07095 M20/M25/M40 family metallo-hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D NCF85_09560 hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D NCF85_00870 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D NCF85_14045 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D NCF85_04970 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D NCF85_02310 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D NCF85_10790 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D NCF85_15475 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D NCF85_11155 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NCF85_08745 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D NCF85_07070 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1 D NCF85_00930 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D NCF85_01450 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D NCF85_03185 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D NCF85_07420 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D NCF85_15480 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D NCF85_05835 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NCF85_01805 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D NCF85_07080 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D NCF85_08900 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D NCF85_06550 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D NCF85_03730 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NCF85_09415 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NCF85_06530 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D NCF85_09385 alpha/beta hydrolase K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-] D NCF85_14490 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D NCF85_01700 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D NCF85_07295 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D NCF85_11115 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D NCF85_10765 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D NCF85_11380 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D NCF85_09670 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NCF85_14915 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NCF85_12745 TldD/PmbA family protein K03592 pmbA; PmbA protein D NCF85_15940 tldD; metalloprotease TldD K03568 tldD; TldD protein D NCF85_00935 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D NCF85_00940 protease modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:qci01003] D NCF85_03805 glycosyltransferase family 2 protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D NCF85_03810 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D NCF85_13580 glycosyltransferase K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D NCF85_14535 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D NCF85_01820 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D NCF85_00925 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCF85_06755 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCF85_09445 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCF85_03600 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:qci01005] D NCF85_11625 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D NCF85_11635 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D NCF85_11630 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:qci01011] D NCF85_16455 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NCF85_02415 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NCF85_02410 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NCF85_07300 Mur ligase family protein K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NCF85_02395 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NCF85_02380 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NCF85_02420 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NCF85_06205 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NCF85_03690 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D NCF85_07295 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D NCF85_11115 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D NCF85_02390 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NCF85_02405 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NCF85_15325 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NCF85_07005 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D NCF85_11500 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D NCF85_00925 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCF85_06755 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCF85_09445 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NCF85_05585 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NCF85_02375 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NCF85_05835 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NCF85_01820 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D NCF85_11410 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D NCF85_04970 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D NCF85_04355 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D NCF85_06920 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D NCF85_11485 murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D NCF85_05845 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D NCF85_08535 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D NCF85_04290 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D NCF85_05840 SPOR domain-containing protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D NCF85_06760 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:qci01004] D NCF85_07290 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NCF85_03365 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NCF85_08540 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NCF85_07115 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCF85_07285 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCF85_10505 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NCF85_08730 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NCF85_14460 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NCF85_12445 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D NCF85_09635 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D NCF85_03010 thioesterase family protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D NCF85_10340 thioesterase family protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D NCF85_06170 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D NCF85_04855 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NCF85_14525 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCF85_14910 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCF85_11800 fatty acyl-AMP ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D NCF85_15915 acyl--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D NCF85_03360 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D NCF85_03695 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NCF85_00280 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NCF85_00295 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:qci01008] D NCF85_02830 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:qci01006] D NCF85_05255 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D NCF85_08945 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D NCF85_08760 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NCF85_01225 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D NCF85_05215 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NCF85_09220 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D NCF85_09380 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:qci01007] D NCF85_09160 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D NCF85_06560 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCF85_12525 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCF85_13830 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D NCF85_05735 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NCF85_11505 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D NCF85_03305 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NCF85_02200 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NCF85_05820 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NCF85_14340 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NCF85_01960 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NCF85_16490 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NCF85_08550 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NCF85_12725 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NCF85_05670 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NCF85_05675 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NCF85_01570 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NCF85_06195 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NCF85_16390 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NCF85_04405 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NCF85_14105 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NCF85_14100 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NCF85_00385 LL-diaminopimelate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D NCF85_10870 aromatic amino acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D NCF85_00310 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NCF85_03685 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D NCF85_04800 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NCF85_13925 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NCF85_14020 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D NCF85_04790 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D NCF85_04520 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCF85_06155 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NCF85_15440 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D NCF85_02490 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:qci00194] D NCF85_03195 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NCF85_03200 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NCF85_03215 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NCF85_03220 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D NCF85_03225 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D NCF85_07500 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NCF85_07505 ATPase K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NCF85_07510 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NCF85_07515 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NCF85_07520 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:qci03000] D NCF85_03240 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D NCF85_03525 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D NCF85_03850 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D NCF85_00175 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D NCF85_08560 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D NCF85_01665 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D NCF85_10200 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D NCF85_10550 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D NCF85_00445 UTRA domain-containing protein K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D NCF85_04280 LuxR family transcriptional regulator K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1 D NCF85_12335 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D NCF85_08065 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D NCF85_16865 heavy metal-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D NCF85_12810 helix-turn-helix domain-containing protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D NCF85_13200 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D NCF85_16965 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D NCF85_09195 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D NCF85_03535 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NCF85_16240 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D NCF85_13950 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NCF85_05875 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D NCF85_05885 helix-turn-helix domain-containing protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D NCF85_06005 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D NCF85_06010 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D NCF85_08810 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D NCF85_03930 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D NCF85_12850 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D NCF85_13685 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D NCF85_10995 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D NCF85_05020 short-chain fatty acyl-CoA regulator family protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D NCF85_07075 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D NCF85_06610 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D NCF85_08645 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D NCF85_12550 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D NCF85_09465 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D NCF85_13955 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D NCF85_16365 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D NCF85_00115 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D NCF85_01285 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D NCF85_07920 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D NCF85_03075 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D NCF85_08450 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCF85_13720 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCF85_14695 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCF85_16700 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCF85_14630 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D NCF85_06270 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D NCF85_10080 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator D NCF85_10100 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D NCF85_09615 PspC domain-containing protein K03973 pspC; phage shock protein C D NCF85_06025 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D NCF85_08220 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D NCF85_12370 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D NCF85_15260 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D NCF85_02000 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D NCF85_10960 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor D NCF85_13880 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D NCF85_05330 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D NCF85_02360 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:qci03021] D NCF85_04095 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NCF85_12540 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NCF85_12535 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NCF85_11145 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D NCF85_05360 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D NCF85_02990 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D NCF85_13105 RNA polymerase sigma factor K24073 cnrH; RNA polymerase sigma factor CnrH D NCF85_01835 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D NCF85_12760 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NCF85_15715 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D NCF85_10070 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D NCF85_03035 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D NCF85_01280 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D NCF85_10960 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor D NCF85_13880 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D NCF85_05390 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D NCF85_04350 GreA/GreB family elongation factor K04760 greB; transcription elongation factor GreB D NCF85_14745 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:qci03019] D NCF85_12680 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D NCF85_06765 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D NCF85_03725 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NCF85_06600 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D NCF85_06190 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NCF85_03755 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D NCF85_02975 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NCF85_15380 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NCF85_05425 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NCF85_10020 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NCF85_14745 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D NCF85_06240 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NCF85_12625 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NCF85_06340 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NCF85_03845 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NCF85_02725 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D NCF85_07035 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D NCF85_02630 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D NCF85_08940 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:qci03011] D NCF85_07480 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D NCF85_08785 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D NCF85_04000 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D NCF85_05315 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D NCF85_04055 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D NCF85_07310 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D NCF85_03950 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D NCF85_04040 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D NCF85_14875 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D NCF85_03965 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D NCF85_04090 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D NCF85_03945 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D NCF85_04085 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D NCF85_04035 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D NCF85_10025 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D NCF85_07445 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D NCF85_04015 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D NCF85_07315 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D NCF85_03990 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D NCF85_00915 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D NCF85_02015 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D NCF85_01310 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D NCF85_03985 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D NCF85_03970 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D NCF85_03975 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D NCF85_04030 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D NCF85_04045 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D NCF85_07320 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D NCF85_12570 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D NCF85_01305 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D NCF85_12575 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D NCF85_14880 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D NCF85_04020 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D NCF85_04065 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D NCF85_04005 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D NCF85_04100 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D NCF85_04050 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D NCF85_07425 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D NCF85_14120 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D NCF85_09320 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D NCF85_03995 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D NCF85_03980 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D NCF85_04025 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D NCF85_09315 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D NCF85_15020 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D NCF85_04010 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D NCF85_04060 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D NCF85_08725 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D NCF85_03355 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D NCF85_15425 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D NCF85_00805 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D NCF85_14125 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D NCF85_00765 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D NCF85_05655 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D NCF85_10670 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:qci03009] D NCF85_03725 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NCF85_12680 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D NCF85_03720 era; GTPase Era K03595 era; GTPase D NCF85_09860 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D NCF85_10960 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor D NCF85_13880 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D NCF85_10070 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D NCF85_03035 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D NCF85_01280 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D NCF85_03085 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D NCF85_00970 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D NCF85_07045 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D NCF85_07600 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D NCF85_09225 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D NCF85_14705 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D NCF85_02365 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D NCF85_06315 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D NCF85_04530 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D NCF85_08890 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D NCF85_11365 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D NCF85_14500 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D NCF85_09355 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D NCF85_04335 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D NCF85_06880 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D NCF85_15435 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D NCF85_07595 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D NCF85_02005 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D NCF85_01840 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D NCF85_03545 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D NCF85_07360 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D NCF85_07440 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D NCF85_01550 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D NCF85_07125 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D NCF85_06765 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D NCF85_09430 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D NCF85_02975 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NCF85_01760 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D NCF85_06335 hflX; GTPase HflX K03665 hflX; GTPase D NCF85_14650 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NCF85_12040 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NCF85_10050 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D NCF85_10075 rimP; ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP D NCF85_14505 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D NCF85_03515 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D NCF85_14785 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D NCF85_05635 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:qci03016] D NCF85_15030 ribonuclease T K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D NCF85_06560 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCF85_12525 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCF85_06195 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NCF85_14340 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NCF85_16490 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NCF85_05820 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NCF85_02200 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NCF85_08550 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NCF85_04405 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NCF85_16390 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NCF85_01570 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NCF85_03305 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NCF85_01960 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NCF85_12725 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NCF85_14105 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NCF85_14100 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NCF85_05735 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NCF85_11505 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D NCF85_00760 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NCF85_12775 tRNA (guanine(46)-N(7))-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D NCF85_02580 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D NCF85_10030 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D NCF85_02690 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_02695 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_12960 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_14650 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NCF85_05215 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NCF85_14715 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D NCF85_14710 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D NCF85_10570 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NCF85_00810 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D NCF85_06275 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D NCF85_08555 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D NCF85_16515 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D NCF85_04220 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D NCF85_09160 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D NCF85_05670 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NCF85_05675 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NCF85_13830 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D NCF85_00325 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D NCF85_15025 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D NCF85_06365 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D NCF85_03490 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D NCF85_08620 MiaB/RimO family radical SAM methylthiotransferase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D NCF85_05325 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D NCF85_06420 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D NCF85_07430 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D NCF85_09210 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D NCF85_02615 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D NCF85_15435 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D NCF85_14420 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D NCF85_14970 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D NCF85_09295 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ D NCF85_05270 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D NCF85_14000 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NCF85_01955 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NCF85_09950 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D NCF85_16325 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D NCF85_05300 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D NCF85_01510 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D NCF85_03550 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D NCF85_09775 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D NCF85_04675 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D NCF85_06190 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NCF85_10020 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:qci03012] D NCF85_10060 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D NCF85_11035 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D NCF85_08780 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D NCF85_03960 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NCF85_03955 fusA; elongation factor G K02355 fusA; elongation factor G D NCF85_12720 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D NCF85_08765 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D NCF85_12715 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D NCF85_05650 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D NCF85_02940 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D NCF85_09980 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D NCF85_04980 efp; elongation factor P K02356 efp; elongation factor P D NCF85_06745 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D NCF85_14085 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D NCF85_15430 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:qci03110] D NCF85_14555 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D NCF85_02090 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D NCF85_01810 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D NCF85_10760 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D NCF85_06240 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NCF85_12625 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NCF85_06235 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D NCF85_14010 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D NCF85_06265 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D NCF85_06495 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA D NCF85_14620 S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D NCF85_12620 groES; co-chaperone GroES K04078 groES; chaperonin GroES D NCF85_00930 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D NCF85_11155 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NCF85_07515 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NCF85_12590 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein D NCF85_14680 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein D NCF85_15840 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein D NCF85_11495 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NCF85_06245 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D NCF85_07085 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D NCF85_06515 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D NCF85_02020 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D NCF85_16265 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D NCF85_03095 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D NCF85_04700 trxA; thioredoxin K03671 TXN; thioredoxin D NCF85_16090 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin D NCF85_06490 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D NCF85_10190 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D NCF85_08255 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D NCF85_08680 redoxin family protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:qci04131] D NCF85_03120 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NCF85_12680 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D NCF85_11925 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D NCF85_04950 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NCF85_04930 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NCF85_14315 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D NCF85_12515 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NCF85_07265 MFS transporter K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:qci03032] D NCF85_02180 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NCF85_08895 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NCF85_11240 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NCF85_03370 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D NCF85_16290 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D NCF85_00910 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NCF85_11135 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NCF85_05365 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D NCF85_08155 CHC2 zinc finger domain-containing protein K02316 dnaG; DNA primase [EC:2.7.7.101] D NCF85_08420 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_10795 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_13060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_06950 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NCF85_07280 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NCF85_03110 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NCF85_16500 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NCF85_05825 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NCF85_14780 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCF85_08920 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NCF85_02750 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NCF85_12665 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NCF85_07145 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NCF85_04270 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NCF85_06410 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NCF85_15900 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NCF85_02715 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NCF85_06325 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NCF85_03705 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NCF85_04500 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:qci03036] D NCF85_03725 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NCF85_04950 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NCF85_13735 strawberry notch C-terminal domain-containing protein K26273 SBNO; protein strawberry notch D NCF85_08480 strawberry notch C-terminal domain-containing protein K26273 SBNO; protein strawberry notch D NCF85_13755 strawberry notch family protein K26273 SBNO; protein strawberry notch D NCF85_08500 strawberry notch family protein K26273 SBNO; protein strawberry notch D NCF85_08895 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NCF85_11240 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NCF85_03370 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D NCF85_16290 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D NCF85_00910 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NCF85_09990 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D NCF85_01190 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D NCF85_06340 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NCF85_03415 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D NCF85_02215 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D NCF85_02220 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D NCF85_02430 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D NCF85_00265 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NCF85_02375 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NCF85_15505 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D NCF85_02425 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D NCF85_02400 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D NCF85_00270 cell division protein K09811 ftsX; cell division transport system permease protein D NCF85_02435 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NCF85_04915 cell division protein ZapA K09888 zapA; cell division protein ZapA D NCF85_06790 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D NCF85_06760 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NCF85_00210 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NCF85_05600 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NCF85_06030 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NCF85_05595 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D NCF85_05590 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D NCF85_05580 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D NCF85_14215 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein D NCF85_14700 ParA family protein K03496 parA; chromosome partitioning protein D NCF85_16695 AAA family ATPase K03496 parA; chromosome partitioning protein D NCF85_01725 ParA family protein K03496 parA; chromosome partitioning protein D NCF85_08450 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCF85_13720 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCF85_14695 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCF85_16700 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCF85_02715 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NCF85_06325 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NCF85_14710 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D NCF85_14705 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D NCF85_06420 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D NCF85_06295 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D NCF85_04600 tyrosine recombinase K04763 xerD; integrase/recombinase XerD D NCF85_00945 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D NCF85_00825 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:qci03400] D NCF85_07000 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D NCF85_16520 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D NCF85_03435 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D NCF85_00885 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NCF85_15925 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NCF85_00860 S1/P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1] D NCF85_04625 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NCF85_15510 thiamine phosphate synthase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NCF85_11515 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NCF85_03240 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D NCF85_03255 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D NCF85_05085 UdgX family uracil-DNA binding protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D NCF85_06915 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D NCF85_02335 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D NCF85_11705 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D NCF85_14805 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NCF85_15410 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NCF85_05145 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NCF85_07145 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NCF85_12665 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NCF85_04245 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D NCF85_09735 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D NCF85_02960 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D NCF85_07615 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NCF85_12540 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NCF85_12535 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NCF85_04095 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NCF85_11145 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D NCF85_04825 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NCF85_13795 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D NCF85_05605 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D NCF85_15000 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D NCF85_05250 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D NCF85_06950 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NCF85_07280 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NCF85_03110 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NCF85_16500 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NCF85_05825 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NCF85_14780 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NCF85_08920 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NCF85_08420 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_10795 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_13060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_04270 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NCF85_04390 recA; recombinase RecA K03553 recA; recombination protein RecA D NCF85_11455 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NCF85_11445 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NCF85_12480 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D NCF85_03270 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D NCF85_06225 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D NCF85_09630 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D NCF85_04835 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NCF85_03795 recombination protein O N-terminal domain-containing protein K03584 recO; DNA repair protein RecO (recombination protein O) D NCF85_02590 recR; recombination mediator RecR K06187 recR; recombination protein RecR D NCF85_07150 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D NCF85_04695 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D NCF85_04690 addB; double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D NCF85_15445 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D NCF85_15985 Ku protein K10979 ku; DNA end-binding protein Ku D NCF85_15990 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D NCF85_06410 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NCF85_15900 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NCF85_03705 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NCF85_04500 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NCF85_08895 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NCF85_11240 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NCF85_03370 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D NCF85_16290 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D NCF85_15380 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NCF85_01205 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D NCF85_06550 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D NCF85_04440 hypothetical protein K14160 imuA; protein ImuA D NCF85_04445 DNA polymerase Y family protein K14161 imuB; protein ImuB D NCF85_04450 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D NCF85_11795 RecX family transcriptional regulator K03565 recX; regulatory protein D NCF85_09180 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D NCF85_14195 ligase-associated DNA damage response DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D NCF85_15980 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NCF85_16010 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:qci03029] D NCF85_14255 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D NCF85_10060 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D NCF85_11035 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D NCF85_08780 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D NCF85_03960 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NCF85_03955 fusA; elongation factor G K02355 fusA; elongation factor G D NCF85_10775 ubiquinol-cytochrome C chaperone family protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3 D NCF85_14615 helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D NCF85_03720 era; GTPase Era K03595 era; GTPase D NCF85_05735 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NCF85_16490 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NCF85_08550 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NCF85_02200 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NCF85_02035 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D NCF85_02045 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D NCF85_02030 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D NCF85_08420 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_10795 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_13060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NCF85_08740 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D NCF85_06240 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NCF85_06265 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D NCF85_12625 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NCF85_12620 groES; co-chaperone GroES K04078 groES; chaperonin GroES D NCF85_06235 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D NCF85_02690 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_02695 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_12960 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_10190 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D NCF85_15535 SAM-dependent methyltransferase K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7 D NCF85_00945 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D NCF85_09380 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D NCF85_09375 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D NCF85_14885 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D NCF85_00820 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NCF85_09365 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D NCF85_10820 SCO family protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:qci02000] D NCF85_10745 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D NCF85_16590 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D NCF85_11865 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D NCF85_08980 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D NCF85_15540 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D NCF85_15545 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D NCF85_13325 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D NCF85_07970 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NCF85_01975 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NCF85_12205 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NCF85_01965 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NCF85_01970 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NCF85_01980 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component D NCF85_07985 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D NCF85_07975 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D NCF85_07980 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D NCF85_05120 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NCF85_05115 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D NCF85_05110 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D NCF85_05105 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D NCF85_08115 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D NCF85_08120 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein D NCF85_08130 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D NCF85_13870 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D NCF85_04205 ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D NCF85_00080 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D NCF85_04195 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D NCF85_16825 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D NCF85_04200 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D NCF85_11555 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D NCF85_11550 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D NCF85_11560 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D NCF85_00365 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D NCF85_00360 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D NCF85_12755 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D NCF85_06970 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D NCF85_06965 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D NCF85_08700 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C D NCF85_02315 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D NCF85_02320 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D NCF85_00270 cell division protein K09811 ftsX; cell division transport system permease protein D NCF85_00265 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NCF85_05290 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D NCF85_09995 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D NCF85_10655 DUF3526 domain-containing protein K01992 ABC-2.P; ABC-2 type transport system permease protein D NCF85_10660 DUF3526 domain-containing protein K01992 ABC-2.P; ABC-2 type transport system permease protein D NCF85_14560 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D NCF85_16315 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D NCF85_05285 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NCF85_10650 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NCF85_15950 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NCF85_16320 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NCF85_09645 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D NCF85_09640 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NCF85_14945 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D NCF85_05050 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D NCF85_08775 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D NCF85_12610 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D NCF85_09110 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NCF85_01390 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NCF85_01950 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NCF85_10235 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D NCF85_10565 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D NCF85_07585 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D NCF85_01210 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D NCF85_08075 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D NCF85_01165 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D NCF85_07405 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D NCF85_12220 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D NCF85_03715 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D NCF85_07265 MFS transporter K06902 UMF1; MFS transporter, UMF1 family D NCF85_01495 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D NCF85_02620 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D NCF85_02625 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D NCF85_01560 potassium channel family protein K10716 kch; voltage-gated potassium channel D NCF85_14065 ammonium transporter K03320 amt; ammonium transporter, Amt family D NCF85_00855 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_03070 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_03390 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_04395 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_08990 glutathione binding-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_09485 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_09495 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_09510 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_11710 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NCF85_09790 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D NCF85_09585 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D NCF85_12615 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D NCF85_06460 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D NCF85_06080 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein D NCF85_11260 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein D NCF85_12770 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel D NCF85_03480 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D NCF85_15750 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NCF85_15810 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NCF85_15815 OmpA family protein K02557 motB; chemotaxis protein MotB D NCF85_14180 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D NCF85_14185 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D NCF85_14190 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D NCF85_11085 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D NCF85_11080 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR D NCF85_11390 zinc transporter ZntB K16074 zntB; zinc transporter D NCF85_02010 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D NCF85_12815 mercuric transporter MerT family protein K08363 merT; mercuric ion transport protein D NCF85_12820 cation transporter K08364 merP; periplasmic mercuric ion binding protein D NCF85_08575 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D NCF85_14355 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D NCF85_04340 outer membrane beta-barrel protein K16079 omp31; outer membrane immunogenic protein D NCF85_13775 porin family protein K16079 omp31; outer membrane immunogenic protein D NCF85_05125 porin K07221 oprO_P; phosphate-selective porin OprO and OprP D NCF85_09795 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D NCF85_13985 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D NCF85_14675 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein D NCF85_13590 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor D NCF85_00070 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D NCF85_04190 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D NCF85_11250 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D NCF85_00250 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_00500 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_01000 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_01580 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_01675 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_04470 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_04780 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_08105 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_09650 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_09675 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_10645 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_11225 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_11835 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_12055 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_15870 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_02890 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_10310 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_10420 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_12230 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_12305 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NCF85_13305 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D NCF85_13215 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D NCF85_13485 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D NCF85_14835 TolC family outer membrane protein K12340 tolC; outer membrane protein D NCF85_11870 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system D NCF85_12225 efflux transporter outer membrane subunit K18300 oprN; outer membrane protein, multidrug efflux system D NCF85_00200 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NCF85_06845 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D NCF85_07700 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D NCF85_11610 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D NCF85_08740 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D NCF85_09245 PQQ-binding-like beta-propeller repeat protein K17713 bamB; outer membrane protein assembly factor BamB D NCF85_07155 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D NCF85_02255 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA D NCF85_10615 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA D NCF85_02260 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB D NCF85_10620 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB D NCF85_04240 YadA-like family protein K21449 ata; trimeric autotransporter adhesin D NCF85_16505 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA D NCF85_16510 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D NCF85_03100 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein D NCF85_16495 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein D NCF85_03520 hemolysin family protein K06189 corC; hemolysin (HlyC) family protein D NCF85_15860 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter D NCF85_01815 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D NCF85_13275 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D NCF85_16630 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D NCF85_13285 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D NCF85_14440 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D NCF85_15910 zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family D NCF85_13295 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D NCF85_13495 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D NCF85_13225 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein D NCF85_00205 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NCF85_09190 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D NCF85_09285 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D NCF85_12830 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D NCF85_13545 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D NCF85_12140 BCCT family transporter K05020 opuD; glycine betaine transporter D NCF85_00015 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D NCF85_00185 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D NCF85_01920 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D NCF85_10695 hypothetical protein K03315 nhaC; Na+:H+ antiporter, NhaC family D NCF85_11315 cation:proton antiporter K24160 NHA1; sodium/hydrogen antiporter D NCF85_02910 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter D NCF85_06160 cation:proton antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D NCF85_04415 cation:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter D NCF85_05925 cation:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter D NCF85_07850 cation:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter D NCF85_09165 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D NCF85_09170 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D NCF85_02765 chloride channel protein K03281 clcA; chloride channel protein, CIC family D NCF85_10915 chrA; chromate efflux transporter K07240 chrA; chromate transporter D NCF85_05505 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family D NCF85_10750 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D NCF85_10950 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D NCF85_13455 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family D NCF85_10980 arsenic transporter K03893 arsB; arsenical pump membrane protein D NCF85_03915 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter D NCF85_12835 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter D NCF85_11500 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D NCF85_08665 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D NCF85_10415 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D NCF85_11850 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D NCF85_16080 MarC family protein K05595 marC; multiple antibiotic resistance protein D NCF85_02400 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D NCF85_11925 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D NCF85_13250 cytochrome c/FTR1 family iron permease K07243 FTR; high-affinity iron transporter D NCF85_00785 hypothetical protein K03832 tonB; periplasmic protein TonB D NCF85_02680 TonB family protein K03832 tonB; periplasmic protein TonB D NCF85_14175 energy transducer TonB K03832 tonB; periplasmic protein TonB D NCF85_11065 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D NCF85_11070 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D NCF85_03025 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D NCF85_07400 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system D NCF85_12215 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system D NCF85_13300 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D NCF85_13490 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D NCF85_13220 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D NCF85_11860 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D NCF85_10255 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system D NCF85_00210 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NCF85_07690 Wzz/FepE/Etk N-terminal domain-containing protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D NCF85_06835 capsular biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D NCF85_06840 Wzz/FepE/Etk N-terminal domain-containing protein K25590 epsF; protein tyrosine kinase modulator D NCF85_10805 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D NCF85_10800 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D NCF85_03780 tryptophan-rich sensory protein K05770 TSPO; translocator protein D NCF85_08685 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D NCF85_06105 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D NCF85_11270 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D NCF85_08095 copD; copper homeostasis membrane protein CopD K07245 pcoD; copper resistance protein D D NCF85_08100 copC; copper homeostasis periplasmic binding protein CopC K07156 copC; copper resistance protein C D NCF85_01245 MipA/OmpV family protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:qci02044] D NCF85_14835 TolC family outer membrane protein K12340 tolC; outer membrane protein D NCF85_11865 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D NCF85_11860 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D NCF85_11870 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system D NCF85_06825 XrtA-associated ATPase K02450 gspA; general secretion pathway protein A D NCF85_02165 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D NCF85_02160 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D NCF85_02155 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D NCF85_02150 CpaD family pilus assembly protein K02281 cpaD; pilus assembly protein CpaD D NCF85_02145 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D NCF85_02865 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D NCF85_02140 type II secretion system F family protein K12510 tadB; tight adherence protein B D NCF85_02135 type II secretion system F family protein K12511 tadC; tight adherence protein C D NCF85_04615 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D NCF85_04620 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D NCF85_16065 YggT family protein K02221 yggT; YggT family protein D NCF85_06555 ComEC family competence protein K02238 comEC; competence protein ComEC D NCF85_15720 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D NCF85_15690 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB D NCF85_15625 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D NCF85_15635 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D NCF85_15640 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D NCF85_15665 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NCF85_15670 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D NCF85_15675 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D NCF85_15680 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D NCF85_15685 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D NCF85_10455 TrbC/VirB2 family protein K03197 virB2; type IV secretion system protein VirB2 D NCF85_15120 TrbC/VirB2 family protein K03197 virB2; type IV secretion system protein VirB2 D NCF85_10450 VirB3 family type IV secretion system protein K03198 virB3; type IV secretion system protein VirB3 D NCF85_15155 VirB3 family type IV secretion system protein K03198 virB3; type IV secretion system protein VirB3 D NCF85_10445 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D NCF85_15150 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D NCF85_10440 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6 D NCF85_15145 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6 D NCF85_15140 VirB8/TrbF family protein K03203 virB8; type IV secretion system protein VirB8 D NCF85_10435 TrbG/VirB9 family P-type conjugative transfer protein K03204 virB9; type IV secretion system protein VirB9 D NCF85_10430 type VI secretion protein K03195 virB10; type IV secretion system protein VirB10 D NCF85_10425 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D NCF85_15125 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D NCF85_13000 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D NCF85_08315 conjugal transfer protein TraG N-terminal domain-containing protein K12056 traG; conjugal transfer mating pair stabilization protein TraG D NCF85_08305 conjugal transfer protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF D NCF85_08300 conjugal transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN D NCF85_08295 trbC; type-F conjugative transfer system pilin assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC D NCF85_08290 TraU family protein K12060 traU; conjugal transfer pilus assembly protein TraU D NCF85_08285 traW; type-F conjugative transfer system protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW D NCF85_08280 S26 family signal peptidase K12062 trbI; conjugal transfer pilin signal peptidase TrbI D NCF85_08265 traC; type IV secretion system protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC D NCF85_08260 conjugal transfer protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV D NCF85_08250 TraB/VirB10 family protein K12065 traB; conjugal transfer pilus assembly protein TraB D NCF85_08245 type-F conjugative transfer system secretin TraK K12066 traK; conjugal transfer pilus assembly protein TraK D NCF85_08240 type IV conjugative transfer system protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE D NCF85_08235 traL; type IV conjugative transfer system protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL D NCF85_08255 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D NCF85_08310 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH D NCF85_12955 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D NCF85_12950 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC D NCF85_12945 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD D NCF85_12940 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D NCF85_12920 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D NCF85_12915 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D NCF85_15135 TrbG/VirB9 family P-type conjugative transfer protein K20532 trbG; type IV secretion system protein TrbG D NCF85_12910 conjugal transfer protein TraI K20533 trbI; type IV secretion system protein TrbI D NCF85_15130 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI D NCF85_12935 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D NCF85_12925 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D NCF85_12160 tagH; type VI secretion system-associated FHA domain protein TagH K11894 impI; type VI secretion system protein ImpI D NCF85_12590 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein D NCF85_14680 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein D NCF85_15840 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein D NCF85_14675 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein D NCF85_15105 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NCF85_14690 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NCF85_14685 spore coat protein U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NCF85_04725 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NCF85_11495 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NCF85_09015 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D NCF85_01275 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NCF85_09010 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D NCF85_06505 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NCF85_04070 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NCF85_07450 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NCF85_08625 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NCF85_09020 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NCF85_00820 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NCF85_02225 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D NCF85_02230 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D NCF85_02235 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:qci02042] D NCF85_08575 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D NCF85_14355 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:qci02022] D NCF85_05130 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NCF85_05095 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NCF85_10495 response regulator transcription factor K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NCF85_13360 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D NCF85_13355 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D NCF85_02640 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D NCF85_02645 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D NCF85_08960 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NCF85_12105 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NCF85_15455 response regulator K02483 K02483; two-component system, OmpR family, response regulator D NCF85_07660 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D NCF85_11960 response regulator transcription factor K02479 K02479; two-component system, NarL family, response regulator D NCF85_14855 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR D NCF85_14850 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D NCF85_15045 LytTR family DNA-binding domain-containing protein K02477 K02477; two-component system, LytTR family, response regulator D NCF85_06360 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NCF85_06355 sigma-54 dependent transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D NCF85_06350 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D NCF85_06345 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D NCF85_05795 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D NCF85_05800 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D NCF85_05040 prsR; PEP-CTERM-box response regulator transcription factor K02481 flgR; two-component system, NtrC family, response regulator D NCF85_01385 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NCF85_01375 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NCF85_01370 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NCF85_04740 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NCF85_13915 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D NCF85_04385 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D NCF85_12765 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D NCF85_07645 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR D NCF85_06135 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D NCF85_16840 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D NCF85_04285 helix-turn-helix transcriptional regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NCF85_06140 fixJ; response regulator FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NCF85_15705 LuxR C-terminal-related transcriptional regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NCF85_16845 response regulator transcription factor K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NCF85_15615 sigma 54-interacting transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NCF85_00980 sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS C 02035 Bacterial motility proteins [BR:qci02035] D NCF85_01385 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NCF85_01380 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NCF85_01365 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NCF85_04745 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NCF85_01370 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NCF85_04740 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NCF85_01375 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NCF85_03465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NCF85_05770 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NCF85_07335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NCF85_15635 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D NCF85_15640 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D NCF85_15670 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D NCF85_15675 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D NCF85_15680 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D NCF85_15685 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D NCF85_15720 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D NCF85_15690 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB D NCF85_15630 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D NCF85_15665 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NCF85_15625 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D NCF85_15790 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D NCF85_15740 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D NCF85_15785 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D NCF85_15655 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D NCF85_15620 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D NCF85_15755 flagellar basal body protein K02387 flgB; flagellar basal-body rod protein FlgB D NCF85_15760 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D NCF85_15775 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D NCF85_15780 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D NCF85_15795 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ D NCF85_15770 flagellar hook basal-body protein K02390 flgE; flagellar hook protein FlgE D NCF85_15800 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D NCF85_15805 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D NCF85_15610 flagellin FliC K02406 fliC; flagellin D NCF85_15695 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D NCF85_15715 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D NCF85_15750 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NCF85_15810 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NCF85_15815 OmpA family protein K02557 motB; chemotaxis protein MotB D NCF85_15615 sigma 54-interacting transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NCF85_15735 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D NCF85_11110 hypothetical protein K02385 flbD; flagellar protein FlbD D NCF85_04615 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D NCF85_04620 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D NCF85_02165 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D NCF85_02160 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D NCF85_02155 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D NCF85_02150 CpaD family pilus assembly protein K02281 cpaD; pilus assembly protein CpaD D NCF85_02145 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D NCF85_02865 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D NCF85_12590 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein D NCF85_14680 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein D NCF85_15840 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein D NCF85_14675 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein D NCF85_15105 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NCF85_14690 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NCF85_14685 spore coat protein U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:qci04812] D NCF85_05600 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NCF85_06030 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NCF85_02435 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NCF85_02430 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D NCF85_14215 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein D NCF85_14700 ParA family protein K03496 parA; chromosome partitioning protein D NCF85_16695 AAA family ATPase K03496 parA; chromosome partitioning protein D NCF85_01725 ParA family protein K03496 parA; chromosome partitioning protein D NCF85_08450 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCF85_13720 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCF85_14695 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCF85_16700 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:qci04147] D NCF85_04950 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NCF85_05425 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NCF85_04930 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NCF85_04935 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NCF85_12515 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NCF85_07085 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D NCF85_00640 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D NCF85_05535 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D NCF85_13430 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D NCF85_16130 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D NCF85_12625 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NCF85_06240 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NCF85_03735 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NCF85_07420 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D NCF85_07050 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NCF85_03960 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NCF85_12680 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D NCF85_00760 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NCF85_05050 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D NCF85_14525 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCF85_14910 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NCF85_02115 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_04485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_06705 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_09855 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_10305 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_15355 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_16570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NCF85_07375 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D NCF85_04665 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D NCF85_04075 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D NCF85_14245 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D NCF85_02550 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NCF85_04295 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NCF85_01475 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D NCF85_02280 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NCF85_14605 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D NCF85_06450 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D NCF85_02325 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D NCF85_15415 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NCF85_02495 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NCF85_16230 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NCF85_04150 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_06165 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NCF85_14380 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D NCF85_01535 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NCF85_06510 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NCF85_14315 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:qci02048] D NCF85_15275 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D NCF85_15290 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D NCF85_15300 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D NCF85_04270 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NCF85_02755 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72] D NCF85_08875 restriction endonuclease K07448 mrr; restriction system protein D NCF85_13770 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NCF85_16735 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NCF85_10100 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D NCF85_09615 PspC domain-containing protein K03973 pspC; phage shock protein C D NCF85_10095 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B D NCF85_13725 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D NCF85_00525 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein D NCF85_02435 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NCF85_05600 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NCF85_06030 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NCF85_02715 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NCF85_06325 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NCF85_06560 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCF85_12525 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NCF85_04830 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D NCF85_02690 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_02695 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NCF85_12960 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:qci04090] D NCF85_07420 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D NCF85_07375 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] C 01504 Antimicrobial resistance genes [BR:qci01504] D NCF85_07070 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1 D NCF85_07075 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D NCF85_07135 class A beta-lactamase-related serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D NCF85_08930 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D NCF85_12655 class A beta-lactamase-related serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D NCF85_00210 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NCF85_00205 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NCF85_00200 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NCF85_12225 efflux transporter outer membrane subunit K18300 oprN; outer membrane protein, multidrug efflux system D NCF85_13200 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D NCF85_16965 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D NCF85_14835 TolC family outer membrane protein K12340 tolC; outer membrane protein D NCF85_10255 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:qci00537] D NCF85_15415 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NCF85_00640 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:qci03100] D NCF85_10680 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCF85_10720 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCF85_02460 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCF85_07455 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NCF85_15115 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCF85_04630 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCF85_06475 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCF85_10410 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NCF85_04810 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NCF85_04900 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NCF85_00405 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D NCF85_11355 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NCF85_04490 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NCF85_05135 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NCF85_05140 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NCF85_01145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NCF85_16095 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NCF85_08710 tRNA-His K14226 tRNA-His; tRNA His D NCF85_10685 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NCF85_10725 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NCF85_16295 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCF85_04995 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCF85_12400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCF85_00255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCF85_01785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NCF85_11895 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NCF85_05575 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NCF85_10665 tRNA-Met K14230 tRNA-Met; tRNA Met D NCF85_10705 tRNA-Met K14230 tRNA-Met; tRNA Met D NCF85_08525 tRNA-Met K14230 tRNA-Met; tRNA Met D NCF85_09100 tRNA-Ile K14230 tRNA-Met; tRNA Met D NCF85_02920 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D NCF85_04875 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NCF85_09025 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NCF85_12025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NCF85_09985 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NCF85_00410 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NCF85_14305 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NCF85_09880 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NCF85_11770 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D NCF85_08885 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D NCF85_01695 tRNA-Val K14237 tRNA-Val; tRNA Val D NCF85_07650 tRNA-Val K14237 tRNA-Val; tRNA Val D NCF85_02565 tRNA-Val K14237 tRNA-Val; tRNA Val D NCF85_10670 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D NCF85_14130 SDR family oxidoreductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D NCF85_14090 SDR family NAD(P)-dependent oxidoreductase K05886 sdh; serine 3-dehydrogenase (NADP+) [EC:1.1.1.276] D NCF85_02515 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D NCF85_02745 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D NCF85_12430 PQQ-dependent dehydrogenase, methanol/ethanol family K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1] D NCF85_10500 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D NCF85_06700 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D NCF85_01400 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D NCF85_00950 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D NCF85_08060 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D NCF85_03630 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D NCF85_06910 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D NCF85_07495 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D NCF85_10175 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D NCF85_14545 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D NCF85_10515 nitronate monooxygenase family protein K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D NCF85_03260 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D NCF85_11470 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D NCF85_13375 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D NCF85_11920 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D NCF85_16235 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D NCF85_00920 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D NCF85_16305 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D NCF85_04495 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D NCF85_06130 alternative oxidase K17893 AOX1; ubiquinol oxidase [EC:1.10.3.11] D NCF85_16415 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NCF85_05485 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NCF85_13170 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NCF85_11465 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D NCF85_13940 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D NCF85_06795 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D NCF85_05280 carotenoid oxygenase family protein K21822 E1.13.11.82; 8'-apo-carotenoid 13,14-cleaving dioxygenase [EC:1.13.11.82] D NCF85_07250 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D NCF85_11255 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D NCF85_01405 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D NCF85_10985 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D NCF85_13675 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D NCF85_03920 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D NCF85_10990 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D NCF85_12840 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D NCF85_13680 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D NCF85_01830 SDR family oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-] D NCF85_14840 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D NCF85_04305 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D NCF85_06995 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D NCF85_10860 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D NCF85_08565 TylF/MycF family methyltransferase K05303 K05303; O-methyltransferase [EC:2.1.1.-] D NCF85_08805 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D NCF85_12705 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D NCF85_13330 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D NCF85_03530 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D NCF85_06730 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D NCF85_02655 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D NCF85_11775 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D NCF85_02250 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D NCF85_15530 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D NCF85_14760 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D NCF85_16410 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D NCF85_09265 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D NCF85_04775 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D NCF85_10315 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D NCF85_10365 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D NCF85_10375 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D NCF85_10155 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D NCF85_11090 YbgC/FadM family acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D NCF85_15485 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D NCF85_03605 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D NCF85_09185 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D NCF85_05815 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D NCF85_02275 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D NCF85_04225 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D NCF85_08050 glycoside hydrolase family 43 protein K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99] D NCF85_08035 DUF2961 domain-containing protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225] D NCF85_01855 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NCF85_02595 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D NCF85_02075 acylase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D NCF85_06485 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D NCF85_06885 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D NCF85_14590 gamma carbonic anhydrase family protein K01726 GAMMACA; gamma-carbonic anhydrase [EC:4.2.1.-] D NCF85_12245 acyl-CoA synthetase K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42] D NCF85_10300 acyl--CoA ligase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-] D NCF85_15525 acyl--CoA ligase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-] D NCF85_05970 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D NCF85_13370 HAD-IC family P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D NCF85_16195 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D NCF85_02340 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S D NCF85_02700 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S D NCF85_12290 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S D NCF85_14625 ferredoxin family protein K05524 fdxA; ferredoxin D NCF85_14375 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D NCF85_14980 EI24 domain-containing protein K06203 cysZ; CysZ protein D NCF85_15515 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism D NCF85_05865 AarF/UbiB family protein K03688 ubiB; ubiquinone biosynthesis protein D NCF85_11695 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D NCF85_12325 AarF/UbiB family protein K03688 ubiB; ubiquinone biosynthesis protein D NCF85_10045 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein D NCF85_05225 Coq4 family protein K18586 COQ4; ubiquinone biosynthesis protein COQ4 D NCF85_12270 ubiquinone biosynthesis protein COQ4 K18586 COQ4; ubiquinone biosynthesis protein COQ4 D NCF85_10810 COQ9 family protein K18587 COQ9; ubiquinone biosynthesis protein COQ9 D NCF85_06385 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism C 99999 Others D NCF85_00100 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D NCF85_09545 cold-shock protein K03704 cspA; cold shock protein D NCF85_14025 cold shock domain-containing protein K03704 cspA; cold shock protein D NCF85_14070 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 C 99974 Translation D NCF85_14565 ligase-associated DNA damage response exonuclease K07577 K07577; putative mRNA 3-end processing factor C 99975 Protein processing D NCF85_06085 META domain-containing protein K03668 hslJ; heat shock protein HslJ D NCF85_00370 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D NCF85_01790 tig; trigger factor K03545 tig; trigger factor D NCF85_10850 ferric reductase-like transmembrane domain-containing protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D NCF85_04375 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D NCF85_00795 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D NCF85_09705 proteasome-type protease K07395 K07395; putative proteasome-type protease D NCF85_00435 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D NCF85_07205 HNH endonuclease K07454 K07454; putative restriction endonuclease D NCF85_01875 hypothetical protein K03630 radC; DNA repair protein RadC D NCF85_07540 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D NCF85_02600 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D NCF85_06310 YraN family protein K07460 yraN; putative endonuclease D NCF85_03700 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D NCF85_02470 replication-associated recombination protein A K07478 ycaJ; putative ATPase D NCF85_08505 toprim domain-containing protein K06919 K06919; putative DNA primase/helicase D NCF85_13760 toprim domain-containing protein K06919 K06919; putative DNA primase/helicase D NCF85_07895 IS110 family transposase K07486 K07486; transposase D NCF85_08170 IS110 family transposase K07486 K07486; transposase D NCF85_05910 IS3 family transposase K07497 K07497; putative transposase D NCF85_08145 IS3 family transposase K07497 K07497; putative transposase D NCF85_10895 IS3 family transposase K07497 K07497; putative transposase D NCF85_12310 IS3 family transposase K07497 K07497; putative transposase D NCF85_13655 Mu transposase C-terminal domain-containing protein K07497 K07497; putative transposase D NCF85_16105 IS3 family transposase K07497 K07497; putative transposase D NCF85_16650 Mu transposase C-terminal domain-containing protein K07497 K07497; putative transposase D NCF85_16665 IS3 family transposase K07497 K07497; putative transposase D NCF85_16785 IS3 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D NCF85_10090 pspA; phage shock protein PspA K03969 pspA; phage shock protein A D NCF85_08915 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D NCF85_00685 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D NCF85_10275 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D NCF85_10280 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D NCF85_05070 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D NCF85_10970 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D NCF85_13690 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D NCF85_04580 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D NCF85_16280 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D NCF85_09665 putP; sodium/proline symporter PutP K03307 TC.SSS; solute:Na+ symporter, SSS family D NCF85_05065 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D NCF85_01270 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D NCF85_11845 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D NCF85_08630 septation protein IspZ K06190 ispZ; intracellular septation protein D NCF85_14495 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D NCF85_09655 typA; translational GTPase TypA K06207 typA; GTP-binding protein D NCF85_05950 HPP family protein K07168 K07168; CBS domain-containing membrane protein D NCF85_03510 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D NCF85_11670 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein D NCF85_11645 beta-3-deoxy-D-manno-oct-2-ulosonic acid transferase K07266 kpsC; capsular polysaccharide export protein D NCF85_11125 glycoside hydrolase family 25 protein K07273 acm; lysozyme D NCF85_05880 outer membrane beta-barrel protein K07275 ompW; outer membrane protein D NCF85_05295 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein D NCF85_12410 NfeD family protein K07340 ybbJ; inner membrane protein D NCF85_14400 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D NCF85_08690 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D NCF85_08670 tetratricopeptide repeat protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D NCF85_08675 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH C 99994 Others D NCF85_05100 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D NCF85_01740 ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin D NCF85_00190 TerC family protein K05794 terC; tellurite resistance protein TerC D NCF85_03835 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D NCF85_01295 copper resistance protein B K07233 pcoB; copper resistance protein B D NCF85_07910 copper resistance protein B K07233 pcoB; copper resistance protein B D NCF85_13095 copper resistance protein B K07233 pcoB; copper resistance protein B D NCF85_16940 copper resistance protein B K07233 pcoB; copper resistance protein B D NCF85_06020 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO D NCF85_13110 periplasmic heavy metal sensor K24078 cnrR; nickel and cobalt resistance protein CnrR B B 09194 Poorly characterized C 99996 General function prediction only D NCF85_06220 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D NCF85_02085 tRNA-binding protein K06878 K06878; tRNA-binding protein D NCF85_00130 group 1 truncated hemoglobin K06886 glbN; hemoglobin D NCF85_06115 group III truncated hemoglobin K06886 glbN; hemoglobin D NCF85_07680 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D NCF85_14935 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D NCF85_14955 SufD family Fe-S cluster assembly protein K09015 sufD; Fe-S cluster assembly protein SufD D NCF85_07010 metal-dependent hydrolase K07038 K07038; inner membrane protein D NCF85_10610 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D NCF85_14455 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D NCF85_10135 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D NCF85_02510 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D NCF85_10975 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D NCF85_09590 LemA family protein K03744 lemA; LemA protein D NCF85_12170 DUF202 domain-containing protein K00389 yidH; putative membrane protein D NCF85_13805 DUF202 domain-containing protein K00389 yidH; putative membrane protein D NCF85_14295 PH domain-containing protein K08981 K08981; putative membrane protein D NCF85_09600 hypothetical protein K08988 K08988; putative membrane protein D NCF85_00560 YbaY family lipoprotein K09914 K09914; putative lipoprotein D NCF85_06075 META domain-containing protein K09914 K09914; putative lipoprotein C 99997 Function unknown D NCF85_10815 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D NCF85_09595 TPM domain-containing protein K06872 K06872; uncharacterized protein D NCF85_02450 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein D NCF85_03890 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D NCF85_11030 pdeM; ligase-associated DNA damage response endonuclease PdeM K06953 K06953; uncharacterized protein D NCF85_14290 N-acetyltransferase K06975 K06975; uncharacterized protein D NCF85_04365 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D NCF85_00850 VOC family protein K06991 K06991; uncharacterized protein D NCF85_09490 VOC family protein K06996 K06996; uncharacterized protein D NCF85_02685 alpha/beta hydrolase K07018 K07018; uncharacterized protein D NCF85_09305 metal-dependent hydrolase K07044 K07044; uncharacterized protein D NCF85_07065 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein D NCF85_12260 OB-fold domain-containing protein K07068 K07068; uncharacterized protein D NCF85_10890 HEPN domain-containing protein K07076 K07076; uncharacterized protein D NCF85_05570 HEPN domain-containing protein K07076 K07076; uncharacterized protein D NCF85_12990 HEPN domain-containing protein K07076 K07076; uncharacterized protein D NCF85_00090 HEPN domain-containing protein K07076 K07076; uncharacterized protein D NCF85_08815 HEPN domain-containing protein K07076 K07076; uncharacterized protein D NCF85_15240 HEPN domain-containing protein K07076 K07076; uncharacterized protein D NCF85_05860 HEPN domain-containing protein K07076 K07076; uncharacterized protein D NCF85_01935 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NCF85_04730 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NCF85_11230 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NCF85_16100 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NCF85_16395 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NCF85_01045 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NCF85_10625 DUF839 domain-containing protein K07093 K07093; uncharacterized protein D NCF85_05520 YeeE/YedE family protein K07112 K07112; uncharacterized protein D NCF85_05525 YeeE/YedE family protein K07112 K07112; uncharacterized protein D NCF85_13440 YeeE/YedE family protein K07112 K07112; uncharacterized protein D NCF85_13445 YeeE/YedE family protein K07112 K07112; uncharacterized protein D NCF85_16115 YeeE/YedE family protein K07112 K07112; uncharacterized protein D NCF85_16120 YeeE/YedE family protein K07112 K07112; uncharacterized protein D NCF85_13560 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein D NCF85_13640 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein D NCF85_01730 SPOR domain-containing protein K07126 K07126; uncharacterized protein D NCF85_13885 hypothetical protein K07126 K07126; uncharacterized protein D NCF85_03350 MAPEG family protein K07136 K07136; uncharacterized protein D NCF85_01735 DUF418 domain-containing protein K07148 K07148; uncharacterized protein D NCF85_16085 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein D NCF85_00815 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D NCF85_11790 DUF192 domain-containing protein K09005 K09005; uncharacterized protein D NCF85_05375 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D NCF85_14585 DUF167 domain-containing protein K09131 K09131; uncharacterized protein D NCF85_10825 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D NCF85_14300 PH domain-containing protein K09167 K09167; uncharacterized protein D NCF85_09835 YqcI/YcgG family protein K09190 K09190; uncharacterized protein D NCF85_00540 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D NCF85_07305 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D NCF85_10140 YbaN family protein K09790 K09790; uncharacterized protein D NCF85_01910 SIMPL domain-containing protein K09797 K09797; uncharacterized protein D NCF85_05055 DUF475 domain-containing protein K09799 K09799; uncharacterized protein D NCF85_07355 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D NCF85_08970 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D NCF85_02925 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D NCF85_13890 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein D NCF85_03635 DMT family protein K09922 K09922; uncharacterized protein D NCF85_04380 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D NCF85_12510 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein D NCF85_09830 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein D NCF85_05660 TraB/GumN family protein K09973 K09973; uncharacterized protein D NCF85_05665 TraB/GumN family protein K09973 K09973; uncharacterized protein D NCF85_07525 YdbL family protein K09978 K09978; uncharacterized protein D NCF85_00020 zf-TFIIB domain-containing protein K09981 K09981; uncharacterized protein D NCF85_10005 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein D NCF85_11755 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein D NCF85_00725 ClpXP protease specificity-enhancing factor SspB K09985 K09985; uncharacterized protein D NCF85_02735 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein D NCF85_14530 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein D NCF85_05765 VWA domain-containing protein K09989 K09989; uncharacterized protein D NCF85_14830 DUF2497 domain-containing protein K09991 K09991; uncharacterized protein D NCF85_10065 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 27, 2024