+D GENES KO
#
KEGG Orthology (KO) - Radiobacillus kanasensis
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rax00010]
D KO561_11135 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D KO561_19830 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D KO561_13415 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D KO561_12450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KO561_07540 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D KO561_17540 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D KO561_17555 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KO561_14870 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D KO561_14880 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KO561_07515 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D KO561_14875 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D KO561_01130 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_03945 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_09945 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_14865 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D KO561_14860 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KO561_12445 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D KO561_15205 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D KO561_02950 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D KO561_08105 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D KO561_08110 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D KO561_08115 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D KO561_15600 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D KO561_08120 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_10800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_15595 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_05740 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KO561_15680 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D KO561_00145 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_03380 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_14905 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_18160 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D KO561_17750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KO561_03590 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D KO561_07525 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D KO561_01165 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_18515 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_02615 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_06725 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_07020 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_07585 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_14225 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_18135 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_18520 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_03265 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D KO561_20220 ptsG; glucose-specific PTS transporter subunit IIBC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:rax00020]
D KO561_01645 citrate synthase/methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D KO561_12425 citZ; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D KO561_06625 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D KO561_09460 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D KO561_12420 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D KO561_05090 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D KO561_05095 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D KO561_08120 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_10800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_15595 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_08800 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D KO561_08795 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D KO561_12230 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D KO561_12225 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D KO561_12235 succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D KO561_05840 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D KO561_12415 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D KO561_19490 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D KO561_07525 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D KO561_02950 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D KO561_08105 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D KO561_08110 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D KO561_08115 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D KO561_15600 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rax00030]
D KO561_13415 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D KO561_07745 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D KO561_15530 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D KO561_08635 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D KO561_09410 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D KO561_17550 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D KO561_17465 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D KO561_11425 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D KO561_16085 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D KO561_16710 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D KO561_04630 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D KO561_10680 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D KO561_17750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KO561_16225 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D KO561_20180 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D KO561_03590 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D KO561_15535 gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D KO561_16010 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D KO561_17555 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KO561_07540 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D KO561_17540 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D KO561_12450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:rax00040]
D KO561_16340 kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D KO561_16425 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D KO561_16450 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D KO561_16345 tagaturonate reductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D KO561_16350 altronate dehydratase family protein K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D KO561_07590 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D KO561_16485 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D KO561_17115 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D KO561_15215 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_16925 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_17120 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_01925 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D KO561_08635 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D KO561_01935 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D KO561_01930 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D KO561_16255 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D KO561_16260 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D KO561_01070 zinc-binding dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D KO561_01080 galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D KO561_15395 Gfo/Idh/MocA family oxidoreductase K14273 xdh; D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) [EC:1.1.1.179]
D KO561_16770 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
C 00051 Fructose and mannose metabolism [PATH:rax00051]
D KO561_18495 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D KO561_19825 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D KO561_12450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KO561_07540 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D KO561_17540 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D KO561_18610 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D KO561_14810 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D KO561_01070 zinc-binding dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D KO561_01080 galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D KO561_16260 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D KO561_17555 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KO561_14870 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D KO561_17465 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D KO561_15720 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D KO561_18615 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D KO561_18625 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D KO561_15575 PTS glucitol/sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D KO561_15580 PTS glucitol/sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:rax00052]
D KO561_18160 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D KO561_18145 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D KO561_18155 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D KO561_18150 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D KO561_15215 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_16925 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_17120 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_17750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KO561_11135 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D KO561_19830 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D KO561_16445 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D KO561_16580 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D KO561_19300 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D KO561_15925 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D KO561_16585 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D KO561_01055 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D KO561_15560 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D KO561_01060 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D KO561_15555 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D KO561_01065 galactitol-specific PTS transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D KO561_15550 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D KO561_12450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KO561_18935 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:rax00053]
D KO561_17115 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D KO561_02700 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D KO561_02705 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D KO561_01925 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:rax00500]
D KO561_18935 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D KO561_15215 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_16925 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_17120 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_14405 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D KO561_17250 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D KO561_01175 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D KO561_18525 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D KO561_01180 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D KO561_18535 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D KO561_01170 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D KO561_18530 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D KO561_01165 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_18515 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_02615 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_06725 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_07020 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_07585 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_14225 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_18135 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_18520 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KO561_03265 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D KO561_01190 treP; PTS system trehalose-specific EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D KO561_01195 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D KO561_17750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KO561_11135 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D KO561_19830 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D KO561_13415 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D KO561_18495 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rax00520]
D KO561_16125 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D KO561_03265 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D KO561_02570 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D KO561_07650 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D KO561_15375 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D KO561_02590 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D KO561_15370 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D KO561_18495 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D KO561_00800 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D KO561_00790 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D KO561_20175 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D KO561_07640 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D KO561_16135 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D KO561_17340 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D KO561_17545 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D KO561_01895 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D KO561_03475 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D KO561_17080 neuC; UDP-N-acetylglucosamine 2-epimerase K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184]
D KO561_17085 neuB; N-acetylneuraminate synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D KO561_01945 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D KO561_01965 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D KO561_16270 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D KO561_16455 xylan 1,4-beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D KO561_20220 ptsG; glucose-specific PTS transporter subunit IIBC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D KO561_11135 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D KO561_19830 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D KO561_17750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KO561_15215 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_16925 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_17120 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_17115 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D KO561_09925 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D KO561_18145 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D KO561_18155 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D KO561_18150 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D KO561_13415 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D KO561_19825 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:rax00620]
D KO561_00145 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_03380 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_14905 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_02950 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D KO561_08105 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D KO561_08110 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D KO561_08115 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D KO561_15600 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D KO561_08120 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_10800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_15595 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_05740 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D KO561_12550 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D KO561_17680 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D KO561_12445 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D KO561_12455 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D KO561_10915 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D KO561_10910 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D KO561_12460 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D KO561_09935 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KO561_15680 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D KO561_05475 aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D KO561_18290 aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D KO561_11120 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D KO561_12470 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D KO561_12415 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D KO561_19490 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D KO561_05840 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D KO561_15710 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D KO561_07525 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D KO561_15205 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D KO561_07820 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rax00630]
D KO561_00145 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_03380 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_14905 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_12415 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D KO561_01645 citrate synthase/methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D KO561_12425 citZ; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D KO561_06625 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D KO561_09460 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D KO561_07195 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D KO561_16170 glcD; glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D KO561_16175 (Fe-S)-binding protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D KO561_01575 katA; catalase KatA K03781 katE; catalase [EC:1.11.1.6]
D KO561_18105 catalase K03781 katE; catalase [EC:1.11.1.6]
D KO561_13565 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D KO561_03535 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D KO561_09160 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D KO561_09380 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KO561_17455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D KO561_11015 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D KO561_11010 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D KO561_11020 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KO561_08120 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_10800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_15595 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_13730 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D KO561_15910 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D KO561_07215 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D KO561_18380 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:rax00640]
D KO561_00145 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_03380 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_14905 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_12550 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D KO561_17680 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D KO561_10795 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D KO561_10790 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D KO561_10785 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D KO561_08120 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_10800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_15595 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_18345 acryloyl-CoA reductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D KO561_12455 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D KO561_10915 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D KO561_10910 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D KO561_12460 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D KO561_07195 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D KO561_08795 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D KO561_08800 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D KO561_18195 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D KO561_10240 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D KO561_05475 aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D KO561_18290 aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
C 00650 Butanoate metabolism [PATH:rax00650]
D KO561_19155 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D KO561_19130 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D KO561_10805 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D KO561_10815 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D KO561_12230 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D KO561_12225 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D KO561_12235 succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D KO561_18205 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D KO561_04340 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KO561_07835 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KO561_07830 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rax00660]
D KO561_04340 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KO561_07835 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KO561_07830 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D KO561_08795 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D KO561_08800 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D KO561_07810 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D KO561_07805 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D KO561_07815 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rax00562]
D KO561_08150 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D KO561_02860 Gfo/Idh/MocA family oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D KO561_18195 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D KO561_14870 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rax00190]
D KO561_07245 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D KO561_13495 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D KO561_12230 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D KO561_12225 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D KO561_12235 succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D KO561_10285 ubiquinol-cytochrome c reductase iron-sulfur subunit K03886 qcrA; quinol---cytochrome c reductase iron-sulfur subunit, bacillus type [EC:7.1.1.8]
D KO561_10280 cytochrome b6 K03887 qcrB; quinol---cytochrome c reductase cytochrome b subunit, bacillus type [EC:7.1.1.8]
D KO561_10275 c-type cytochrome K03888 qcrC; quinol---cytochrome c reductase cytochrome c subunit, bacillus type [EC:7.1.1.8]
D KO561_08200 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D KO561_08220 ctaF; cytochrome c oxidase subunit IVB K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D KO561_08215 cytochrome (ubi)quinol oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D KO561_08210 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D KO561_08205 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D KO561_08195 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D KO561_13920 qoxD; cytochrome aa3 quinol oxidase subunit IV K02829 qoxD; cytochrome aa3-600 menaquinol oxidase subunit IV [EC:7.1.1.5]
D KO561_13915 qoxC; cytochrome aa3 quinol oxidase subunit III K02828 qoxC; cytochrome aa3-600 menaquinol oxidase subunit III [EC:7.1.1.5]
D KO561_13910 qoxB; cytochrome aa3 quinol oxidase subunit I K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5]
D KO561_13905 qoxA; cytochrome aa3 quinol oxidase subunit II K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5]
D KO561_17410 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D KO561_17400 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D KO561_17405 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D KO561_17415 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D KO561_17395 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D KO561_17430 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D KO561_17420 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D KO561_17425 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D KO561_09695 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D KO561_15065 ppaX; pyrophosphatase PpaX K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
D KO561_13545 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:rax00710]
D KO561_14875 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D KO561_14880 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KO561_07515 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D KO561_17555 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KO561_07540 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D KO561_17540 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D KO561_09410 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D KO561_17465 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D KO561_14870 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D KO561_08635 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D KO561_17550 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D KO561_15710 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D KO561_07525 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D KO561_12415 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:rax00720]
D KO561_15205 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D KO561_15710 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D KO561_12415 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D KO561_05840 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D KO561_12230 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D KO561_12225 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D KO561_12235 succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D KO561_08800 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D KO561_08795 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D KO561_12420 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D KO561_06625 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D KO561_09460 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D KO561_12455 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D KO561_10915 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D KO561_10910 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D KO561_12460 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D KO561_07195 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D KO561_10895 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D KO561_17680 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D KO561_12550 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D KO561_00145 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_03380 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_14905 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:rax00680]
D KO561_05740 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D KO561_17455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D KO561_14860 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KO561_15710 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D KO561_12415 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D KO561_17555 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KO561_07540 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D KO561_17540 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D KO561_12450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KO561_12550 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D KO561_17680 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D KO561_00145 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_03380 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_14905 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_15205 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D KO561_01130 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_03945 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_09945 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_14865 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D KO561_16575 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KO561_19935 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KO561_19905 HAD-IA family hydrolase K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:rax00910]
D KO561_06960 nirB; nitrite reductase large subunit NirB K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D KO561_06965 nirD; nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D KO561_14595 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D KO561_10470 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D KO561_06650 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D KO561_09380 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KO561_09640 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D KO561_09645 gltD; glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D KO561_05480 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rax00920]
D KO561_14920 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D KO561_14915 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D KO561_14910 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D KO561_03120 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D KO561_04385 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D KO561_07555 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D KO561_12635 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D KO561_12630 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D KO561_12495 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D KO561_12650 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D KO561_12645 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D KO561_12640 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D KO561_07975 DoxX family protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D KO561_00330 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D KO561_09710 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D KO561_20330 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D KO561_14930 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D KO561_18705 cystathionine gamma-synthase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D KO561_05555 bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D KO561_15525 sfnG; dimethyl sulfone monooxygenase SfnG K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rax00061]
D KO561_12455 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D KO561_10915 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D KO561_10910 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D KO561_12460 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D KO561_08700 acyl carrier protein K02078 acpP; acyl carrier protein
D KO561_08690 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D KO561_06355 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D KO561_07465 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D KO561_12690 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D KO561_06360 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D KO561_09910 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D KO561_08695 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KO561_09235 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KO561_06130 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KO561_17145 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D KO561_05070 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D KO561_06510 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D KO561_19115 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation [PATH:rax00062]
D KO561_19155 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00071 Fatty acid degradation [PATH:rax00071]
D KO561_19125 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D KO561_19155 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D KO561_19130 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D KO561_19115 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D KO561_05740 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rax00561]
D KO561_15910 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KO561_15625 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D KO561_15620 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D KO561_15615 PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D KO561_15635 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D KO561_08685 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D KO561_09535 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D KO561_03285 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D KO561_10425 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D KO561_11365 diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D KO561_02925 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D KO561_01890 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D KO561_04390 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D KO561_11130 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D KO561_09925 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D KO561_15925 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D KO561_16585 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:rax00564]
D KO561_10395 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D KO561_15630 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D KO561_09535 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D KO561_03285 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D KO561_10425 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D KO561_11365 diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D KO561_02925 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D KO561_10740 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D KO561_09035 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D KO561_09765 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D KO561_09255 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D KO561_17825 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D KO561_01985 sn-glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D KO561_02865 heptaprenylglyceryl phosphate synthase K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-]
D KO561_15060 acetyltransferase K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:rax00600]
D KO561_16445 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D KO561_15925 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D KO561_16585 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:rax00592]
D KO561_19125 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rax00230]
D KO561_10710 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D KO561_04630 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D KO561_10680 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D KO561_17750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KO561_16225 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D KO561_20180 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D KO561_02815 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D KO561_02835 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D KO561_02825 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D KO561_02810 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D KO561_02800 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D KO561_02805 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D KO561_02820 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D KO561_02785 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D KO561_02780 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D KO561_02795 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D KO561_02790 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D KO561_02830 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D KO561_11765 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D KO561_09825 5'-nucleotidase C-terminal domain-containing protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D KO561_03885 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D KO561_10675 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D KO561_13465 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D KO561_08480 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D KO561_20310 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D KO561_00050 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D KO561_10345 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D KO561_13110 DUF84 family protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D KO561_12190 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D KO561_02745 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D KO561_14240 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D KO561_08590 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D KO561_02520 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D KO561_02515 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D KO561_00110 deoxynucleoside kinase K15518 dgk; deoxyguanosine kinase [EC:2.7.1.113]
D KO561_11760 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D KO561_13540 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D KO561_06475 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D KO561_06760 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D KO561_19880 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D KO561_00105 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D KO561_02845 amidohydrolase family protein K01486 ade; adenine deaminase [EC:3.5.4.2]
D KO561_18110 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D KO561_09275 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D KO561_00545 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D KO561_12630 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D KO561_12635 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:rax00240]
D KO561_01870 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D KO561_08545 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D KO561_01865 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D KO561_08540 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D KO561_08530 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D KO561_08535 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D KO561_15995 amidohydrolase/deacetylase family metallohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D KO561_08555 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D KO561_08550 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D KO561_08565 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D KO561_08560 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D KO561_09020 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D KO561_16510 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D KO561_10345 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D KO561_11960 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D KO561_17570 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D KO561_10430 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D KO561_11640 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D KO561_09825 5'-nucleotidase C-terminal domain-containing protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D KO561_03885 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D KO561_17450 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D KO561_08525 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D KO561_18110 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D KO561_09275 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D KO561_04905 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D KO561_10670 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D KO561_10140 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D KO561_02520 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D KO561_02515 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D KO561_00105 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D KO561_11510 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D KO561_20070 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D KO561_17525 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D KO561_19735 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D KO561_10050 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rax00250]
D KO561_10185 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KO561_10460 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D KO561_06220 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D KO561_13260 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D KO561_07230 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D KO561_18185 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D KO561_01855 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D KO561_01860 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D KO561_16660 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D KO561_19880 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D KO561_02790 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D KO561_08530 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D KO561_18205 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D KO561_09640 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D KO561_09645 gltD; glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D KO561_10470 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D KO561_06650 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D KO561_04850 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D KO561_09380 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KO561_01870 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D KO561_08545 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D KO561_01865 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D KO561_08540 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D KO561_02805 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D KO561_00800 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D KO561_02815 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rax00260]
D KO561_09150 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KO561_10830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KO561_09145 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D KO561_13560 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D KO561_18695 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D KO561_13550 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D KO561_13555 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D KO561_01620 ltaE; low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D KO561_17455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D KO561_15910 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D KO561_01130 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_03945 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_09945 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_14865 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D KO561_16575 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KO561_19935 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KO561_19905 HAD-IA family hydrolase K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3]
D KO561_16190 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D KO561_11015 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D KO561_11010 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D KO561_11020 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KO561_08120 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_10800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_15595 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_13730 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D KO561_02540 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D KO561_02565 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D KO561_05555 bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D KO561_08665 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D KO561_08670 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D KO561_09730 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D KO561_18050 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D KO561_18055 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D KO561_01565 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D KO561_01570 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D KO561_01560 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:rax00270]
D KO561_00330 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D KO561_09710 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D KO561_20330 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D KO561_05555 bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D KO561_13430 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KO561_05550 cysK; cysteine synthase A K17216 mccA; cystathionine beta-synthase (O-acetyl-L-serine) [EC:2.5.1.134]
D KO561_03070 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D KO561_03075 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D KO561_13265 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D KO561_12380 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D KO561_17610 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D KO561_12515 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D KO561_11615 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D KO561_18905 HAD hydrolase-like protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D KO561_08480 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D KO561_12605 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D KO561_05540 methyltransferase domain-containing protein K17462 yrrT; putative AdoMet-dependent methyltransferase [EC:2.1.1.-]
D KO561_05545 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D KO561_09150 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KO561_10830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KO561_09145 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D KO561_13560 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D KO561_18695 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D KO561_14930 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D KO561_18705 cystathionine gamma-synthase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D KO561_14925 aminotransferase class V-fold PLP-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D KO561_17915 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D KO561_07845 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KO561_09655 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KO561_10185 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KO561_12415 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D KO561_08665 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D KO561_08670 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D KO561_16575 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KO561_19935 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:rax00280]
D KO561_07845 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KO561_09655 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KO561_10810 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D KO561_10795 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D KO561_10790 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D KO561_10785 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D KO561_08120 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_10800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_15595 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_19155 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D KO561_19125 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D KO561_07195 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D KO561_02025 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D KO561_18195 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rax00290]
D KO561_09730 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D KO561_07810 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D KO561_07805 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D KO561_07815 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D KO561_04340 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KO561_07835 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KO561_07830 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D KO561_07825 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D KO561_07840 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D KO561_07845 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KO561_09655 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KO561_10810 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D KO561_07820 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rax00300]
D KO561_13560 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D KO561_18695 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D KO561_09150 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KO561_10830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KO561_09145 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D KO561_09155 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KO561_09775 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KO561_16525 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KO561_16550 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KO561_10245 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D KO561_18385 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D KO561_13520 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D KO561_10625 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D KO561_08045 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D KO561_08005 aminotransferase A K00841 patA; aminotransferase [EC:2.6.1.-]
D KO561_08050 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D KO561_08390 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D KO561_08395 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rax00310]
D KO561_05095 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D KO561_08120 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_10800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_15595 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_19155 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D KO561_18205 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D KO561_05025 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rax00220]
D KO561_01875 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D KO561_01855 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D KO561_01860 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D KO561_16660 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D KO561_00755 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D KO561_02805 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D KO561_09380 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KO561_01870 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D KO561_08545 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D KO561_01865 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D KO561_08540 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D KO561_10470 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D KO561_06650 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D KO561_10185 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KO561_18395 argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D KO561_18390 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D KO561_18400 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D KO561_18385 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:rax00330]
D KO561_08130 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D KO561_17605 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D KO561_17610 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D KO561_12515 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D KO561_12380 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D KO561_19460 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KO561_15850 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KO561_18630 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KO561_00755 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D KO561_06205 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D KO561_00095 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D KO561_01715 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D KO561_13745 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D KO561_04850 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D KO561_09685 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D KO561_09690 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D KO561_09770 alpha/beta hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D KO561_14525 alpha/beta hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D KO561_10185 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KO561_05025 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D KO561_16730 proline racemase family protein K01777 prdF; proline racemase [EC:5.1.1.4]
C 00340 Histidine metabolism [PATH:rax00340]
D KO561_09575 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D KO561_09605 hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D KO561_09595 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D KO561_09590 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D KO561_09600 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D KO561_09585 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D KO561_10320 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KO561_09565 hisJ; histidinol-phosphatase HisJ K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D KO561_09580 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D KO561_14615 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D KO561_14620 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D KO561_14625 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D KO561_14630 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:rax00350]
D KO561_10185 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KO561_10320 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KO561_05740 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D KO561_05005 hpaB; 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D KO561_06640 NAD(P)H-dependent oxidoreductase K16902 E1.5.1.45; FAD reductase [NAD(P)H] [EC:1.5.1.45]
D KO561_15520 NAD(P)H-dependent oxidoreductase K16902 E1.5.1.45; FAD reductase [NAD(P)H] [EC:1.5.1.45]
D KO561_18205 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:rax00360]
D KO561_10185 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KO561_10320 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KO561_05025 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D KO561_15850 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KO561_18630 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:rax00380]
D KO561_07220 kynA; tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D KO561_07215 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D KO561_07210 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D KO561_06640 NAD(P)H-dependent oxidoreductase K16902 E1.5.1.45; FAD reductase [NAD(P)H] [EC:1.5.1.45]
D KO561_15520 NAD(P)H-dependent oxidoreductase K16902 E1.5.1.45; FAD reductase [NAD(P)H] [EC:1.5.1.45]
D KO561_05095 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D KO561_08120 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_10800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_15595 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_19155 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KO561_15850 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KO561_18630 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KO561_01575 katA; catalase KatA K03781 katE; catalase [EC:1.11.1.6]
D KO561_18105 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rax00400]
D KO561_12710 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D KO561_10330 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D KO561_10970 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D KO561_11550 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D KO561_11040 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D KO561_10310 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D KO561_10335 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D KO561_18080 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D KO561_18075 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D KO561_18070 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D KO561_18060 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D KO561_18065 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D KO561_18050 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D KO561_18055 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D KO561_10325 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D KO561_11885 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D KO561_10315 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D KO561_11880 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D KO561_10185 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KO561_10320 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rax00410]
D KO561_10210 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KO561_10215 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D KO561_18195 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:rax00430]
D KO561_15440 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KO561_18190 aspartate aminotransferase family protein K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D KO561_07230 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D KO561_18185 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D KO561_10470 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D KO561_17680 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D KO561_12550 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:rax00440]
D KO561_19425 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D KO561_19405 ATP-binding cassette domain-containing protein K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D KO561_19410 phnM; phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D KO561_19420 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D KO561_19445 PHP domain-containing protein K20859 phnPP; phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase [EC:3.1.4.57]
C 00450 Selenocompound metabolism [PATH:rax00450]
D KO561_18705 cystathionine gamma-synthase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D KO561_13430 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KO561_03070 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D KO561_03075 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D KO561_13680 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D KO561_15045 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D KO561_18540 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D KO561_12635 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D KO561_19650 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D KO561_16000 DgaE family pyridoxal phosphate-dependent ammonia lyase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D KO561_20120 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rax00460]
D KO561_14405 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D KO561_15440 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KO561_10460 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D KO561_17455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rax00470]
D KO561_02260 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D KO561_05025 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D KO561_01810 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D KO561_02805 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D KO561_12205 racE; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D KO561_08405 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D KO561_16865 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D KO561_13520 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D KO561_10625 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D KO561_16730 proline racemase family protein K01777 prdF; proline racemase [EC:5.1.1.4]
D KO561_16765 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
C 00480 Glutathione metabolism [PATH:rax00480]
D KO561_15440 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KO561_15465 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D KO561_12420 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D KO561_15530 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D KO561_02000 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D KO561_17610 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D KO561_12515 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:rax00511]
D KO561_16445 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:rax00542]
D KO561_17025 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D KO561_17125 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rax00541]
D KO561_15215 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_16925 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_17120 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KO561_18150 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D KO561_17115 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D KO561_19825 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D KO561_20175 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D KO561_03475 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:rax00550]
D KO561_17340 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D KO561_17545 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D KO561_01895 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D KO561_12735 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D KO561_08405 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D KO561_08390 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D KO561_01810 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D KO561_08395 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D KO561_09030 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D KO561_05080 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D KO561_06325 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D KO561_08400 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D KO561_05435 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D KO561_10165 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KO561_06075 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D KO561_17615 PBP1A family penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D KO561_08380 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D KO561_08385 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D KO561_11210 penicillin-binding protein 2 K21465 pbpA; penicillin-binding protein A
D KO561_00060 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D KO561_10665 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D KO561_04305 vanY; VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D KO561_05825 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D KO561_12670 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
C 00552 Teichoic acid biosynthesis [PATH:rax00552]
D KO561_05080 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D KO561_06325 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D KO561_17025 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D KO561_17125 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D KO561_16115 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D KO561_16850 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D KO561_00160 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D KO561_01890 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D KO561_04390 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D KO561_11130 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D KO561_17060 glycosyltransferase family 2 protein K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rax00543]
D KO561_17025 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D KO561_17125 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D KO561_00330 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rax00730]
D KO561_07695 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D KO561_13965 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D KO561_15315 thiazole biosynthesis adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D KO561_11705 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_12590 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_19645 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_12585 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D KO561_15330 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D KO561_10870 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D KO561_15320 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D KO561_15335 tenI; thiazole tautomerase TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D KO561_13970 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D KO561_13975 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D KO561_02415 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D KO561_08630 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D KO561_09495 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D KO561_07050 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KO561_07055 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KO561_08640 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D KO561_00545 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D KO561_13960 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:rax00740]
D KO561_04965 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D KO561_04955 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D KO561_03250 Cof-type HAD-IIB family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D KO561_06285 Cof-type HAD-IIB family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D KO561_04970 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D KO561_04960 ribE; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D KO561_09100 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D KO561_03120 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D KO561_04385 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D KO561_07555 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D KO561_07945 nfsA; oxygen-insensitive NADPH nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D KO561_06640 NAD(P)H-dependent oxidoreductase K16902 E1.5.1.45; FAD reductase [NAD(P)H] [EC:1.5.1.45]
D KO561_15520 NAD(P)H-dependent oxidoreductase K16902 E1.5.1.45; FAD reductase [NAD(P)H] [EC:1.5.1.45]
D KO561_13970 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D KO561_10710 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rax00750]
D KO561_01785 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D KO561_13555 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D KO561_00065 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D KO561_00070 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rax00760]
D KO561_01470 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D KO561_12740 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D KO561_10675 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D KO561_13465 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D KO561_09825 5'-nucleotidase C-terminal domain-containing protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D KO561_03885 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D KO561_11540 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D KO561_01480 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D KO561_06480 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D KO561_12570 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D KO561_18205 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rax00770]
D KO561_04340 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KO561_07835 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KO561_07830 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D KO561_07825 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D KO561_07840 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D KO561_10220 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D KO561_15055 ketopantoate reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D KO561_10215 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D KO561_06855 coaW; type II pantothenate kinase K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33]
D KO561_08600 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D KO561_08305 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D KO561_12385 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D KO561_02245 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D KO561_07845 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KO561_09655 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KO561_10210 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rax00780]
D KO561_06360 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D KO561_09910 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D KO561_08695 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KO561_09235 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KO561_06130 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KO561_17145 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D KO561_05070 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D KO561_06510 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D KO561_04545 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D KO561_10225 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rax00785]
D KO561_05930 lipoate--protein ligase family protein K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D KO561_05925 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D KO561_17670 lipoate--protein ligase family protein K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D KO561_06105 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D KO561_08120 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_10800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_15595 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_02950 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D KO561_08105 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D KO561_08110 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D KO561_08115 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D KO561_15600 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D KO561_05090 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D KO561_05095 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D KO561_10795 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D KO561_10790 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D KO561_10785 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D KO561_11015 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D KO561_11010 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D KO561_11020 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KO561_13730 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rax00790]
D KO561_09530 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D KO561_07050 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KO561_07055 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KO561_20340 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D KO561_20345 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D KO561_20335 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D KO561_10045 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D KO561_12015 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D KO561_04965 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D KO561_07175 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D KO561_07170 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D KO561_04880 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D KO561_14025 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D KO561_13980 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D KO561_14010 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D KO561_14000 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D KO561_14015 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:rax00670]
D KO561_10045 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D KO561_10895 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D KO561_17455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D KO561_02825 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D KO561_02830 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D KO561_08610 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D KO561_11020 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KO561_03070 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D KO561_19735 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D KO561_10050 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D KO561_18380 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D KO561_04550 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rax00860]
D KO561_12120 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D KO561_04060 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D KO561_12095 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D KO561_12100 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D KO561_12110 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D KO561_06080 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D KO561_06090 hemY; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D KO561_06085 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D KO561_17685 heme-dependent peroxidase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D KO561_06975 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D KO561_12620 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D KO561_07005 NAD(P)-binding protein K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D KO561_06980 sirohydrochlorin chelatase K03794 sirB; sirohydrochlorin ferrochelatase [EC:4.99.1.4]
D KO561_12615 sirohydrochlorin chelatase K03794 sirB; sirohydrochlorin ferrochelatase [EC:4.99.1.4]
D KO561_08200 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D KO561_08195 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D KO561_04115 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D KO561_06025 ferritin-like domain-containing protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rax00130]
D KO561_10355 menG; demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D KO561_13340 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D KO561_13335 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D KO561_13330 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D KO561_17675 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D KO561_13320 o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D KO561_13325 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D KO561_01435 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D KO561_13345 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D KO561_03015 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D KO561_05810 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D KO561_12075 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rax00900]
D KO561_10870 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D KO561_09040 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D KO561_00315 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D KO561_20160 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D KO561_00320 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D KO561_11270 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D KO561_11295 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D KO561_10880 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D KO561_10360 heptaprenyl diphosphate synthase component 1 K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D KO561_10350 hepT; heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D KO561_09030 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:rax00907]
D KO561_19125 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D KO561_19155 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D KO561_09410 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D KO561_13340 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rax00946]
D KO561_14405 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:rax00332]
D KO561_09685 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D KO561_09690 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rax00261]
D KO561_12635 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D KO561_09150 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KO561_10830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KO561_09145 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D KO561_09155 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KO561_09775 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KO561_16525 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KO561_16550 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KO561_10245 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rax00521]
D KO561_11135 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D KO561_19830 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D KO561_17750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KO561_08150 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D KO561_11135 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D KO561_19830 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:rax00401]
D KO561_10315 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D KO561_10185 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KO561_10320 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D KO561_18080 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D KO561_18075 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D KO561_08690 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D KO561_08695 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KO561_09235 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KO561_06130 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KO561_05070 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D KO561_06510 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D KO561_08700 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rax00999]
D KO561_13265 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D KO561_11550 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D KO561_14405 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rax00362]
D KO561_19125 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D KO561_06615 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D KO561_19130 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00627 Aminobenzoate degradation [PATH:rax00627]
D KO561_15850 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KO561_18630 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KO561_09935 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:rax00625]
D KO561_05740 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D KO561_03210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D KO561_06615 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:rax00622]
D KO561_06615 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D KO561_19125 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rax00643]
D KO561_15850 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KO561_18630 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KO561_06615 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D KO561_19155 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:rax00626]
D KO561_05740 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rax03020]
D KO561_00400 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D KO561_00405 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D KO561_00580 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D KO561_08595 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D KO561_17575 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rax03010]
D KO561_10420 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D KO561_09010 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D KO561_00470 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D KO561_12610 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D KO561_00525 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D KO561_19955 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D KO561_00420 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D KO561_00510 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D KO561_00615 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D KO561_00435 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D KO561_00575 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D KO561_00415 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D KO561_00570 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D KO561_00505 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D KO561_02595 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D KO561_09105 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D KO561_08735 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D KO561_00485 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D KO561_19945 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D KO561_00460 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D KO561_11490 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D KO561_11415 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D KO561_00380 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D KO561_00455 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D KO561_00440 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D KO561_00445 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D KO561_00500 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D KO561_00515 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D KO561_00390 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D KO561_19890 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D KO561_00385 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D KO561_00375 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D KO561_00610 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D KO561_00490 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D KO561_00535 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D KO561_00475 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D KO561_00585 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D KO561_00520 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D KO561_08760 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D KO561_12335 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D KO561_11910 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D KO561_00465 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D KO561_00450 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D KO561_00495 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D KO561_20185 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D KO561_11900 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D KO561_08650 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D KO561_00480 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D KO561_00530 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D KO561_17530 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D KO561_08335 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D KO561_00360 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D KO561_11170 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D KO561_20040 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D KO561_12340 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D KO561_00565 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D KO561_00410 50S ribosomal protein L7ae-like protein K07590 RP-L7A; large subunit ribosomal protein L7A
D KO561_00265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_02390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_04135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_05690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_13215 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_20045 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_00205 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_00685 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_04140 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_00700 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_00270 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_02395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_05695 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_13210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_00210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_20050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_04145 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_00215 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_00705 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_13205 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_20055 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_05700 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_02400 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_00275 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rax00970]
D KO561_00260 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D KO561_00695 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D KO561_00750 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D KO561_03580 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D KO561_00250 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D KO561_02370 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D KO561_12180 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D KO561_14970 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D KO561_00115 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D KO561_00710 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D KO561_02330 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D KO561_04150 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D KO561_11250 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D KO561_02345 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D KO561_02410 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D KO561_04175 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D KO561_04210 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D KO561_00740 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D KO561_11110 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D KO561_02350 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D KO561_04200 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D KO561_00720 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D KO561_02340 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D KO561_04160 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D KO561_00240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D KO561_02380 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D KO561_05030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D KO561_12175 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D KO561_04205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D KO561_04195 tRNA-His K14226 tRNA-His; tRNA His
D KO561_11240 tRNA-His K14226 tRNA-His; tRNA His
D KO561_00690 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D KO561_02385 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D KO561_04215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D KO561_00245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D KO561_02360 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D KO561_02365 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D KO561_00235 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D KO561_00230 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D KO561_00745 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D KO561_02355 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D KO561_11235 tRNA-Ile K14230 tRNA-Met; tRNA Met
D KO561_02405 tRNA-Met K14230 tRNA-Met; tRNA Met
D KO561_04170 tRNA-Met K14230 tRNA-Met; tRNA Met
D KO561_05705 tRNA-Met K14230 tRNA-Met; tRNA Met
D KO561_11245 tRNA-Met K14230 tRNA-Met; tRNA Met
D KO561_20260 tRNA-Met K14230 tRNA-Met; tRNA Met
D KO561_04180 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D KO561_11225 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D KO561_00255 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D KO561_02375 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D KO561_00090 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D KO561_02335 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D KO561_04155 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D KO561_11230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D KO561_14170 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D KO561_00225 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D KO561_00715 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D KO561_00730 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D KO561_04190 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D KO561_04185 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D KO561_00735 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D KO561_00220 tRNA-Val K14237 tRNA-Val; tRNA Val
D KO561_00725 tRNA-Val K14237 tRNA-Val; tRNA Val
D KO561_06580 tRNA-Val K14237 tRNA-Val; tRNA Val
D KO561_04165 tRNA-Val K14237 tRNA-Val; tRNA Val
D KO561_00325 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D KO561_02915 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D KO561_02920 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D KO561_02910 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D KO561_11675 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D KO561_11735 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D KO561_10180 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D KO561_11340 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D KO561_11335 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D KO561_12350 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KO561_12660 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KO561_00075 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D KO561_16000 DgaE family pyridoxal phosphate-dependent ammonia lyase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D KO561_00335 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KO561_20120 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D KO561_08610 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D KO561_12030 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D KO561_13220 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KO561_08510 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D KO561_20355 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D KO561_02110 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KO561_17590 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KO561_01990 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D KO561_09050 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D KO561_11740 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D KO561_12290 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D KO561_12285 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D KO561_12665 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KO561_06375 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rax03060]
D KO561_00540 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D KO561_00365 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D KO561_14800 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D KO561_11780 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D KO561_11815 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D KO561_20030 spoIIIJ; YidC family membrane integrase SpoIIIJ K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KO561_15225 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D KO561_08730 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D KO561_00175 ffs; signal recognition particle sRNA large type K01983 ffs; SRP RNA
D KO561_08720 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D KO561_10040 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D KO561_10035 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D KO561_01015 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KO561_01750 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KO561_06145 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KO561_08765 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KO561_08515 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rax04122]
D KO561_11705 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_12590 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_19645 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_14450 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D KO561_11700 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D KO561_14010 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D KO561_14025 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D KO561_14005 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D KO561_14020 ThiF family adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D KO561_13980 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D KO561_14000 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D KO561_12585 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D KO561_15325 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D KO561_15315 thiazole biosynthesis adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rax03018]
D KO561_14860 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KO561_09110 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D KO561_14790 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D KO561_02220 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D KO561_10515 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D KO561_17795 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D KO561_17535 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D KO561_09270 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D KO561_08080 rnjA; ribonuclease J1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D KO561_12450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KO561_11450 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D KO561_02465 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KO561_09330 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D KO561_13545 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rax03030]
D KO561_07600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KO561_01390 3'-5' exoribonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KO561_12475 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KO561_09055 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D KO561_00180 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KO561_20085 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KO561_11495 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KO561_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KO561_19885 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D KO561_11320 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D KO561_19950 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KO561_06795 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D KO561_10085 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D KO561_08780 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D KO561_12280 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D KO561_12395 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KO561_02875 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rax03410]
D KO561_10170 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D KO561_00055 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D KO561_03640 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D KO561_01555 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D KO561_12390 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D KO561_19080 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D KO561_07665 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D KO561_05760 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D KO561_11285 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D KO561_12395 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KO561_11770 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D KO561_02875 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rax03420]
D KO561_20205 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D KO561_15120 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D KO561_15125 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D KO561_12245 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D KO561_02870 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KO561_18305 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KO561_12395 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KO561_02875 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rax03430]
D KO561_09305 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D KO561_12260 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D KO561_09310 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D KO561_02870 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KO561_18305 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KO561_10890 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D KO561_10885 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D KO561_11770 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D KO561_19950 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KO561_12475 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KO561_09055 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D KO561_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KO561_00180 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KO561_11495 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KO561_20085 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KO561_07600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KO561_01390 3'-5' exoribonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KO561_02875 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D KO561_05195 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:rax03440]
D KO561_11770 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D KO561_19950 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KO561_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D KO561_11345 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D KO561_00190 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D KO561_09265 recA; recombinase RecA K03553 recA; recombination protein RecA
D KO561_12395 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KO561_11840 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D KO561_11835 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D KO561_08675 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D KO561_11690 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D KO561_12475 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KO561_09055 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D KO561_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KO561_00180 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KO561_11495 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KO561_20085 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KO561_07600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KO561_01390 3'-5' exoribonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KO561_08605 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
D KO561_17720 Ku protein K10979 ku; DNA end-binding protein Ku
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rax02010]
D KO561_14920 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D KO561_14915 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D KO561_14910 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D KO561_13995 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D KO561_13990 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D KO561_03880 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D KO561_16675 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D KO561_03875 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D KO561_16665 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D KO561_03870 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D KO561_16670 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D KO561_15750 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D KO561_18230 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D KO561_18225 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D KO561_18220 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D KO561_18235 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D KO561_02555 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D KO561_02625 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D KO561_05975 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D KO561_05465 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D KO561_05970 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D KO561_05470 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D KO561_05965 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D KO561_05860 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D KO561_19185 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D KO561_15940 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D KO561_06705 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D KO561_07560 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D KO561_14425 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D KO561_16155 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D KO561_16285 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D KO561_15935 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_06710 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_07565 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_14420 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_15985 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_16150 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_16280 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_15980 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_15930 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_16145 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_06715 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_07570 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_14415 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_16275 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_16600 extracellular solute-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D KO561_19285 sugar ABC transporter substrate-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D KO561_16595 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein
D KO561_19290 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein
D KO561_16590 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein
D KO561_19295 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein
D KO561_16465 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D KO561_16475 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D KO561_16470 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D KO561_17385 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D KO561_17390 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D KO561_17380 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D KO561_17375 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D KO561_15500 extracellular solute-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D KO561_15495 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D KO561_15490 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D KO561_01940 ABC transporter substrate-binding protein K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D KO561_01950 sugar ABC transporter permease K17235 araP; arabinooligosaccharide transport system permease protein
D KO561_01955 carbohydrate ABC transporter permease K17236 araQ; arabinooligosaccharide transport system permease protein
D KO561_09205 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D KO561_13230 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D KO561_09215 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D KO561_09220 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D KO561_09210 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D KO561_15410 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D KO561_15405 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D KO561_15400 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D KO561_16690 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D KO561_16695 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D KO561_16975 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D KO561_16700 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D KO561_16980 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D KO561_16705 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D KO561_17305 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D KO561_17295 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D KO561_17300 xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D KO561_11205 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D KO561_11200 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D KO561_11195 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D KO561_11190 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D KO561_18115 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D KO561_19400 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D KO561_14650 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D KO561_14645 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D KO561_18125 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D KO561_18130 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D KO561_19385 ABC transporter permease subunit K02042 phnE; phosphonate transport system permease protein
D KO561_19390 ABC transporter permease subunit K02042 phnE; phosphonate transport system permease protein
D KO561_14640 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D KO561_18120 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D KO561_19395 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D KO561_16200 transporter substrate-binding domain-containing protein K10036 glnH; glutamine transport system substrate-binding protein
D KO561_16205 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein
D KO561_18500 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein
D KO561_16210 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D KO561_01530 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D KO561_03345 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D KO561_01535 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D KO561_03350 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D KO561_01540 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D KO561_04380 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D KO561_13700 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D KO561_17320 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D KO561_04375 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D KO561_13705 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D KO561_17325 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D KO561_04370 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D KO561_13710 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D KO561_17330 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D KO561_06385 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D KO561_06390 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D KO561_06395 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein
D KO561_06400 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D KO561_06405 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D KO561_17270 peptide ABC transporter substrate-binding protein K16199 dppE; dipeptide transport system substrate-binding protein
D KO561_17285 ABC transporter permease K16200 dppB1; dipeptide transport system permease protein
D KO561_17280 ABC transporter permease K16201 dppC; dipeptide transport system permease protein
D KO561_17275 ABC transporter ATP-binding protein K16202 dppD; dipeptide transport system ATP-binding protein
D KO561_00905 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D KO561_00900 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D KO561_00895 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D KO561_00890 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D KO561_02635 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D KO561_02640 iron ABC transporter permease K23228 fhuB; ferric hydroxamate transport system permease protein
D KO561_07420 metal ABC transporter substrate-binding protein K19975 mntC; manganese transport system substrate-binding protein
D KO561_07425 metal ABC transporter permease K19976 mntB; manganese transport system permease protein
D KO561_07430 metal ABC transporter ATP-binding protein K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D KO561_02610 ZinT/AdcA family metal-binding protein K09815 znuA; zinc transport system substrate-binding protein
D KO561_13760 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D KO561_14375 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D KO561_02605 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D KO561_13770 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D KO561_02600 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D KO561_13765 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D KO561_04930 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D KO561_13475 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D KO561_00600 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D KO561_14115 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D KO561_01215 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D KO561_00590 energy-coupling factor ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D KO561_00595 energy-coupling factor ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D KO561_16090 energy-coupling factor ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D KO561_04800 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D KO561_09890 ABC transporter ATP-binding protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
D KO561_15180 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D KO561_15185 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D KO561_11045 ABC transporter permease K16918 ytrF; acetoin utilization transport system permease protein
D KO561_11060 DUF6449 domain-containing protein K16919 ytrC_D; acetoin utilization transport system permease protein
D KO561_11065 ABC transporter ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D KO561_11050 ABC transporter ATP-binding protein K16920 ytrE; acetoin utilization transport system ATP-binding protein
D KO561_05485 ABC transporter ATP-binding protein/permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D KO561_08065 ABC transporter ATP-binding protein/permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D KO561_05490 ABC transporter ATP-binding protein/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D KO561_08070 ABC transporter ATP-binding protein/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D KO561_18320 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D KO561_18315 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D KO561_05780 ATP-binding cassette domain-containing protein K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:rax02060]
D KO561_14820 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D KO561_13460 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D KO561_14740 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D KO561_14815 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D KO561_20220 ptsG; glucose-specific PTS transporter subunit IIBC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D KO561_03265 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D KO561_02570 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D KO561_07650 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D KO561_19050 beta-glucoside-specific PTS transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D KO561_01190 treP; PTS system trehalose-specific EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D KO561_18615 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D KO561_18625 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D KO561_01175 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D KO561_18525 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D KO561_01180 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D KO561_18535 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D KO561_01170 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D KO561_18530 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D KO561_15575 PTS glucitol/sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D KO561_15580 PTS glucitol/sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D KO561_01055 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D KO561_15560 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D KO561_01060 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D KO561_15555 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D KO561_01065 galactitol-specific PTS transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D KO561_15550 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D KO561_02700 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D KO561_02705 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D KO561_15720 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D KO561_14810 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:rax03070]
D KO561_11780 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D KO561_00365 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D KO561_14800 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D KO561_00540 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D KO561_11815 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D KO561_20030 spoIIIJ; YidC family membrane integrase SpoIIIJ K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KO561_15225 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D KO561_08720 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D KO561_08730 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D KO561_10040 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D KO561_10035 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rax02020]
D KO561_12400 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D KO561_12405 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D KO561_07050 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KO561_07055 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KO561_11205 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D KO561_02060 response regulator transcription factor K07770 cssR; two-component system, OmpR family, response regulator CssR
D KO561_15270 flagellin K02406 fliC; flagellin
D KO561_08990 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D KO561_12700 motP; flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D KO561_14035 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D KO561_07625 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D KO561_16535 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D KO561_09670 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D KO561_07620 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D KO561_09675 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D KO561_10555 ATP-binding protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D KO561_06265 response regulator K07775 resD; two-component system, OmpR family, response regulator ResD
D KO561_10560 response regulator transcription factor K07775 resD; two-component system, OmpR family, response regulator ResD
D KO561_08195 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D KO561_19860 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D KO561_19865 yycF; response regulator YycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D KO561_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D KO561_04290 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D KO561_04075 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D KO561_04285 response regulator transcription factor K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D KO561_04295 ABC transporter ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D KO561_04300 ABC transporter permease K11636 yxdM; putative ABC transport system permease protein
D KO561_04305 vanY; VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D KO561_05825 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D KO561_13445 kinase-associated lipoprotein B K06347 kapB; kinase-associated protein B
D KO561_17560 response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D KO561_10845 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D KO561_07605 sensor histidine kinase K11637 citS; two-component system, CitB family, sensor histidine kinase CitS [EC:2.7.13.3]
D KO561_07610 response regulator K11638 K11638; two-component system, CitB family, response regulator CitT
D KO561_16305 sensor histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D KO561_16310 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D KO561_15010 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D KO561_12470 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D KO561_13400 sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D KO561_13405 LytTR family DNA-binding domain-containing protein K07705 lytT; two-component system, LytTR family, response regulator LytT
D KO561_15275 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D KO561_15360 sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D KO561_15355 response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU
D KO561_01340 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D KO561_01345 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D KO561_01335 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D KO561_15690 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D KO561_06045 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D KO561_06050 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
D KO561_15685 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
D KO561_15705 flagellar basal body rod protein K11619 liaI; lia operon protein LiaI
D KO561_06040 liaF; cell wall-active antibiotics response protein LiaF K11622 liaF; lia operon protein LiaF
D KO561_09380 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KO561_10340 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D KO561_03425 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_09355 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_06560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_18010 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_19470 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_08975 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D KO561_13835 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D KO561_08970 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KO561_08920 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KO561_09435 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KO561_08965 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D KO561_16325 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D KO561_17765 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D KO561_06700 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D KO561_14435 response regulator K07720 yesN; two-component system, response regulator YesN
D KO561_15415 response regulator K07720 yesN; two-component system, response regulator YesN
D KO561_03325 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D KO561_17250 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D KO561_15305 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D KO561_00755 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rax02024]
D KO561_05545 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D KO561_09330 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D KO561_18080 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D KO561_18075 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D KO561_15765 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D KO561_17950 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D KO561_17960 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D KO561_17945 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D KO561_17955 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D KO561_19115 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D KO561_04955 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D KO561_06385 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D KO561_06390 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D KO561_06395 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein
D KO561_06400 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D KO561_06405 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D KO561_14985 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D KO561_14990 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D KO561_14995 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D KO561_14975 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D KO561_14980 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D KO561_17255 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D KO561_20030 spoIIIJ; YidC family membrane integrase SpoIIIJ K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KO561_06120 competence protein ComK K02250 comK; competence protein ComK
D KO561_11780 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D KO561_00365 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D KO561_14800 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D KO561_00540 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D KO561_11815 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D KO561_15225 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D KO561_08720 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D KO561_08730 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D KO561_15355 response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU
D KO561_17560 response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D KO561_10845 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rax02030]
D KO561_03425 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_09355 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_06560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_18010 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_19470 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_16690 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D KO561_08970 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KO561_08975 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D KO561_13835 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D KO561_08920 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KO561_09435 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KO561_08980 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D KO561_13840 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D KO561_08965 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D KO561_08985 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D KO561_10340 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D KO561_08855 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D KO561_08910 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D KO561_08915 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D KO561_12700 motP; flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D KO561_14035 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D KO561_12695 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D KO561_14030 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rax02040]
D KO561_08845 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D KO561_08850 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D KO561_08855 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D KO561_08865 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D KO561_08870 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D KO561_08905 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D KO561_08910 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D KO561_08915 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D KO561_08925 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D KO561_08930 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D KO561_08935 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D KO561_08940 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D KO561_08950 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D KO561_08945 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D KO561_08835 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D KO561_08840 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D KO561_08885 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D KO561_08895 flgG; flagellar basal body rod protein FlgG K02390 flgE; flagellar hook protein FlgE
D KO561_17180 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF
D KO561_17175 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D KO561_15295 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D KO561_15290 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D KO561_15270 flagellin K02406 fliC; flagellin
D KO561_15250 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D KO561_12700 motP; flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D KO561_14035 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D KO561_12695 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D KO561_14030 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D KO561_15305 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D KO561_01530 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D KO561_03345 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D KO561_11315 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D KO561_08990 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D KO561_14860 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D KO561_04115 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rax01501]
D KO561_16125 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D KO561_06385 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D KO561_06390 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D KO561_06395 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein
D KO561_06400 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D KO561_06405 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D KO561_10165 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KO561_12670 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D KO561_06075 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:rax01502]
D KO561_01810 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D KO561_02260 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D KO561_08395 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D KO561_08400 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D KO561_05435 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D KO561_04305 vanY; VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D KO561_05825 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rax01503]
D KO561_00655 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D KO561_05370 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D KO561_04660 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rax01000]
C 01001 Protein kinases [BR:rax01001]
D KO561_08625 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D KO561_02285 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D KO561_02300 rsbW; anti-sigma B factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D KO561_20300 serine/threonine-protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D KO561_16935 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D KO561_12400 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D KO561_10555 ATP-binding protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D KO561_19860 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D KO561_04290 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D KO561_04075 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D KO561_15360 sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D KO561_01340 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D KO561_15690 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D KO561_06045 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D KO561_07605 sensor histidine kinase K11637 citS; two-component system, CitB family, sensor histidine kinase CitS [EC:2.7.13.3]
D KO561_16305 sensor histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D KO561_13400 sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D KO561_08970 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KO561_06700 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rax01009]
D KO561_12450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KO561_08620 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:rax01002]
D KO561_08515 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D KO561_11485 gpr; GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D KO561_02745 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D KO561_18575 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D KO561_16965 LysM peptidoglycan-binding domain-containing protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D KO561_14045 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D KO561_16870 NlpC/P60 family protein K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D KO561_17260 C40 family peptidase K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D KO561_02815 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D KO561_09640 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D KO561_00800 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D KO561_06220 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D KO561_13260 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D KO561_01775 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D KO561_01740 class D sortase K07284 srtA; sortase A [EC:3.4.22.70]
D KO561_02455 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D KO561_00100 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D KO561_06445 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D KO561_01525 M4 family metallopeptidase K01400 nprE; bacillolysin [EC:3.4.24.28]
D KO561_18760 immune inhibitor A K09607 ina; immune inhibitor A [EC:3.4.24.-]
D KO561_04305 vanY; VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D KO561_05825 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D KO561_01485 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D KO561_18570 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D KO561_16990 M20 family metallopeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D KO561_01460 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D KO561_10760 M20/M25/M40 family metallo-hydrolase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D KO561_06020 M20 family metallopeptidase K01436 yhaA; amidohydrolase [EC:3.5.1.-]
D KO561_08050 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D KO561_13615 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D KO561_00550 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D KO561_05790 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D KO561_10965 Xaa-Pro peptidase family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D KO561_03920 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D KO561_04105 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D KO561_17730 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D KO561_17805 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D KO561_10105 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D KO561_20315 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D KO561_05635 M42 family metallopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D KO561_11920 M50 family metallopeptidase K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D KO561_09045 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D KO561_17290 M55 family metallopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D KO561_10455 prsW; glutamic-type intramembrane protease PrsW K24131 prsW; protease PrsW [EC:3.4.-.-]
D KO561_13385 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D KO561_04665 S8 family peptidase K17734 aprX; serine protease AprX [EC:3.4.21.-]
D KO561_00060 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D KO561_10665 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D KO561_14055 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D KO561_15015 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D KO561_12150 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D KO561_12155 lonB; ATP-dependent protease LonB K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D KO561_08320 PDZ domain-containing protein K07177 K07177; Lon-like protease
D KO561_09395 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D KO561_01015 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KO561_01750 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KO561_06145 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KO561_08765 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KO561_09770 alpha/beta hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D KO561_14525 alpha/beta hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D KO561_15170 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D KO561_10850 spoIVB; SpoIVB peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D KO561_17265 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D KO561_08820 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D KO561_15440 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 01003 Glycosyltransferases [BR:rax01003]
D KO561_10165 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KO561_12670 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D KO561_06075 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D KO561_17615 PBP1A family penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D KO561_17025 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D KO561_17125 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D KO561_17060 glycosyltransferase family 2 protein K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rax01005]
D KO561_01845 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D KO561_17025 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D KO561_17125 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rax01011]
D KO561_17340 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D KO561_17545 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D KO561_01895 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D KO561_12735 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D KO561_08405 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D KO561_08390 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D KO561_01810 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D KO561_02260 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D KO561_12205 racE; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D KO561_17265 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D KO561_08400 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D KO561_05435 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D KO561_05080 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D KO561_06325 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D KO561_10165 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KO561_12670 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D KO561_06075 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D KO561_17615 PBP1A family penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D KO561_08380 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D KO561_08385 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D KO561_11210 penicillin-binding protein 2 K21465 pbpA; penicillin-binding protein A
D KO561_15390 penicillin-binding transpeptidase domain-containing protein K21467 pbpC; penicillin-binding protein 3
D KO561_11630 penicillin-binding protein 2 K21468 pbpI; penicillin-binding protein 4B
D KO561_00060 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D KO561_10665 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D KO561_04305 vanY; VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D KO561_05825 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D KO561_16965 LysM peptidoglycan-binding domain-containing protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D KO561_14045 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D KO561_13615 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D KO561_01485 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D KO561_01740 class D sortase K07284 srtA; sortase A [EC:3.4.22.70]
D KO561_11650 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D KO561_10450 sleB; spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D KO561_17240 spoIID; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D KO561_00655 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D KO561_05370 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D KO561_04660 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rax01004]
D KO561_08690 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D KO561_06355 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D KO561_07465 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D KO561_12690 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D KO561_06360 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D KO561_09910 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D KO561_08695 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KO561_09235 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KO561_06130 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KO561_17145 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D KO561_05070 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D KO561_06510 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D KO561_01335 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D KO561_00145 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_03380 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_14905 acsA; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KO561_19115 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D KO561_08685 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D KO561_09535 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D KO561_03285 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D KO561_10425 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:rax01006]
D KO561_10880 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D KO561_10360 heptaprenyl diphosphate synthase component 1 K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D KO561_10350 hepT; heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D KO561_09030 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D KO561_09325 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D KO561_13345 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D KO561_08200 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:rax01007]
D KO561_00325 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D KO561_12665 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KO561_06375 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D KO561_00335 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KO561_02110 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KO561_17590 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KO561_20120 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D KO561_08510 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D KO561_12030 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D KO561_13220 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KO561_20355 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D KO561_11735 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D KO561_10180 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D KO561_11740 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D KO561_11340 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D KO561_11335 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D KO561_00075 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D KO561_01990 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D KO561_09050 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D KO561_12350 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KO561_12660 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KO561_11675 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D KO561_12290 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D KO561_12285 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D KO561_10185 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KO561_08005 aminotransferase A K00841 patA; aminotransferase [EC:2.6.1.-]
D KO561_18875 aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D KO561_10320 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KO561_16190 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D KO561_13430 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KO561_06205 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D KO561_18385 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D KO561_01565 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D KO561_18190 aspartate aminotransferase family protein K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D KO561_04060 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D KO561_12095 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D KO561_05025 dat; D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D KO561_07845 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KO561_09655 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KO561_07170 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
C 00199 Cytochrome P450 [BR:rax00199]
D KO561_01295 cytochrome P450 K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:rax00194]
D KO561_17395 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D KO561_17400 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D KO561_17405 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D KO561_17410 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D KO561_17415 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D KO561_17420 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D KO561_17425 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D KO561_17430 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D KO561_17435 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rax03000]
D KO561_03795 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D KO561_09345 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D KO561_14955 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D KO561_03030 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D KO561_06645 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D KO561_09635 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D KO561_01650 LysR family transcriptional regulator K19242 citR; LysR family transcriptional regulator, repressor for citA
D KO561_15715 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D KO561_17190 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D KO561_09715 DeoR/GlpR family DNA-binding transcription regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D KO561_07530 helix-turn-helix transcriptional regulator K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D KO561_11330 helix-turn-helix transcriptional regulator K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D KO561_00920 DeoR family transcriptional regulator K21601 ycnK; DeoR family transcriptional regulator, copper-sensing transcriptional repressor
D KO561_12705 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KO561_15945 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KO561_16715 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KO561_17245 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KO561_15950 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D KO561_01920 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D KO561_01970 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D KO561_01200 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D KO561_01160 GntR family transcriptional regulator K24966 gamR; GntR family transcriptional regulator, amino sugar utilization regulator
D KO561_07645 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D KO561_15380 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D KO561_09200 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D KO561_05715 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D KO561_11070 GntR family transcriptional regulator K07979 ytrA; GntR family transcriptional regulator
D KO561_13145 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D KO561_19140 TetR family transcriptional regulator K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D KO561_12215 response regulator transcription factor K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein
D KO561_02195 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D KO561_09375 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D KO561_18730 MerR family transcriptional regulator K23776 tnrA; MerR family transcriptional regulator, global nitrogen regulator
D KO561_10695 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D KO561_13775 transcriptional repressor K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D KO561_04120 perR; peroxide-responsive transcriptional repressor PerR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D KO561_11710 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D KO561_02090 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D KO561_05605 metalloregulator ArsR/SmtB family transcription factor K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D KO561_17925 metalloregulator ArsR/SmtB family transcription factor K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D KO561_02135 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D KO561_02155 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D KO561_03960 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D KO561_04530 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D KO561_17905 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D KO561_10985 mntR; transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D KO561_10225 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D KO561_02560 GbsR/MarR family transcriptional regulator K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D KO561_05915 GbsR/MarR family transcriptional regulator K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D KO561_05960 transcriptional regulator K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator
D KO561_20165 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D KO561_02445 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D KO561_08830 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D KO561_03525 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D KO561_14215 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D KO561_02265 antitoxin K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D KO561_18970 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D KO561_20215 PRD domain-containing protein K03480 glcT; transcriptional antiterminator
D KO561_02695 BglG family transcription antiterminator K03483 mtlR; mannitol operon transcriptional activator
D KO561_18510 BglG family transcription antiterminator K03491 licR; probable licABCH operon transcriptional regulator
D KO561_13755 metal-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D KO561_18725 PucR family transcriptional regulator ligand-binding domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D KO561_16220 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D KO561_20115 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D KO561_20210 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D KO561_19990 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KO561_20000 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KO561_15645 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D KO561_10860 argR; transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism
D KO561_11460 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D KO561_13960 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D KO561_15335 tenI; thiazole tautomerase TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D KO561_00285 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D KO561_14885 hypothetical protein K05311 cggR; central glycolytic genes regulator
D KO561_06345 BMP family ABC transporter substrate-binding protein K05519 med; transcriptional activator of comK gene
D KO561_08525 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D KO561_11725 RsfA family transcriptional regulator K06314 rsfA; prespore-specific regulator
D KO561_01760 transcriptional regulator K06315 splA; transcriptional regulator of the spore photoproduct lyase operon
D KO561_01320 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D KO561_12370 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D KO561_14610 hutP; hut operon transcriptional regulator HutP K09683 hutP; hut operon positive regulatory protein
D KO561_06120 competence protein ComK K02250 comK; competence protein ComK
D KO561_08365 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rax03021]
D KO561_00580 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D KO561_00400 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D KO561_00405 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D KO561_17575 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D KO561_08595 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D KO561_11315 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D KO561_19540 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KO561_03295 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KO561_00765 sigW; RNA polymerase sigma factor SigW K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KO561_00930 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KO561_10540 sigX; RNA polymerase sigma factor SigX K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KO561_14580 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KO561_17520 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KO561_17995 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KO561_19565 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KO561_16070 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KO561_14160 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KO561_18005 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KO561_15160 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KO561_02305 sigB; RNA polymerase sigma factor SigB K03090 sigB; RNA polymerase sigma-B factor
D KO561_08465 sigE; RNA polymerase sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D KO561_08470 sigG; RNA polymerase sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D KO561_10650 sigF; RNA polymerase sporulation sigma factor SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D KO561_11600 sigK; RNA polymerase sporulation sigma factor SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D KO561_00355 sigH; RNA polymerase sporulation sigma factor SigH K27000 sigH; RNA polymerase sigma-H factor
D KO561_05500 sigI; RNA polymerase sigma factor SigI K03093 sigI; RNA polymerase sigma-I factor
D KO561_08990 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D KO561_09065 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D KO561_10900 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D KO561_00370 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D KO561_02285 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D KO561_02280 STAS domain-containing protein K17762 rsbS; rsbT antagonist protein RsbS
D KO561_02275 RsbT co-antagonist protein RsbRA K17763 rsbR; rsbT co-antagonist protein RsbR
D KO561_01450 STAS domain-containing protein K17763 rsbR; rsbT co-antagonist protein RsbR
D KO561_02290 PP2C family protein-serine/threonine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D KO561_19380 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D KO561_19375 alpha/beta hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ
D KO561_02295 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D KO561_02300 rsbW; anti-sigma B factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D KO561_11635 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D KO561_17535 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rax03019]
D KO561_08705 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D KO561_08080 rnjA; ribonuclease J1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D KO561_09270 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D KO561_14790 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D KO561_05920 yhaM; 3'-5' exoribonuclease YhaM K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D KO561_02220 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D KO561_11290 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D KO561_10515 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D KO561_17795 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D KO561_14860 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KO561_09110 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D KO561_17535 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D KO561_12450 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KO561_11450 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D KO561_02465 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KO561_09330 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D KO561_13545 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D KO561_15275 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D KO561_15035 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:rax03011]
D KO561_10420 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D KO561_09010 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D KO561_00470 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D KO561_12610 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D KO561_00525 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D KO561_19955 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D KO561_00420 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D KO561_00510 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D KO561_00615 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D KO561_00435 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D KO561_00575 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D KO561_00415 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D KO561_00570 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D KO561_00505 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D KO561_02595 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D KO561_09105 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D KO561_08735 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D KO561_00485 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D KO561_19945 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D KO561_00460 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D KO561_11490 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D KO561_11415 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D KO561_00380 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D KO561_00455 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D KO561_00440 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D KO561_00445 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D KO561_00500 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D KO561_00515 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D KO561_19890 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D KO561_00385 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D KO561_00375 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D KO561_00390 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D KO561_00610 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D KO561_00490 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D KO561_00535 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D KO561_00475 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D KO561_00585 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D KO561_00520 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D KO561_08760 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D KO561_12335 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D KO561_11910 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D KO561_00465 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D KO561_00450 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D KO561_00495 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D KO561_11900 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D KO561_08650 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D KO561_00480 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D KO561_00530 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D KO561_17530 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D KO561_08335 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D KO561_00360 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D KO561_11170 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D KO561_20040 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D KO561_12340 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D KO561_00565 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D KO561_20185 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D KO561_00410 50S ribosomal protein L7ae-like protein K07590 RP-L7A; large subunit ribosomal protein L7A
D KO561_04145 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_00215 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_00705 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_13205 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_20055 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_05700 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_02400 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_00275 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_00265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_02390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_04135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_05690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_13215 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_20045 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_00205 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_00685 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_04140 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_00700 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_00270 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_02395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_05695 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_13210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_00210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_20050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rax03009]
D KO561_08705 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D KO561_11355 era; GTPase Era K03595 era; GTPase
D KO561_11890 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D KO561_09065 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D KO561_10900 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D KO561_00370 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D KO561_13190 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D KO561_20140 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D KO561_08615 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D KO561_00395 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D KO561_08300 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D KO561_11435 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D KO561_20010 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D KO561_08370 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D KO561_20110 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D KO561_10865 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D KO561_00345 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D KO561_19780 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D KO561_19580 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D KO561_07150 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D KO561_02930 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D KO561_10580 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D KO561_06485 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D KO561_08520 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D KO561_02430 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D KO561_14605 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D KO561_06895 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D KO561_05640 GNAT family N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D KO561_08750 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D KO561_11440 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D KO561_11665 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D KO561_00340 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D KO561_02220 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D KO561_11290 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D KO561_08630 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D KO561_09495 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D KO561_10400 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D KO561_08770 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D KO561_09365 hflX; GTPase HflX K03665 hflX; GTPase
D KO561_11555 yqeH; ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D KO561_17480 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D KO561_11760 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D KO561_09090 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D KO561_09060 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D KO561_00015 yaaA; S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein
D KO561_11530 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D KO561_11370 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D KO561_11545 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D KO561_15230 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D KO561_19960 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D KO561_08330 YceD family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rax03016]
D KO561_10750 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D KO561_10230 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D KO561_01990 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D KO561_09050 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D KO561_08510 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D KO561_13220 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KO561_20120 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D KO561_02110 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KO561_17590 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KO561_20355 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D KO561_11735 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D KO561_11675 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D KO561_10180 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D KO561_12350 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KO561_12660 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KO561_00075 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D KO561_00335 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KO561_12030 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D KO561_11740 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D KO561_12290 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D KO561_12285 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D KO561_12665 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KO561_06375 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D KO561_11755 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D KO561_06000 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D KO561_13125 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D KO561_00605 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D KO561_09095 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D KO561_11705 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_12590 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_19645 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_17480 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D KO561_09325 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D KO561_20020 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D KO561_20015 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D KO561_19650 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D KO561_20035 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D KO561_10120 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D KO561_12195 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D KO561_11340 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D KO561_11335 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D KO561_00325 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D KO561_00170 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D KO561_09285 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D KO561_11430 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D KO561_08755 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D KO561_11305 tRNA (adenine(22)-N(1))-methyltransferase TrmK K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D KO561_05050 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D KO561_12295 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D KO561_11700 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D KO561_14450 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D KO561_13515 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D KO561_11825 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D KO561_18585 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D KO561_04880 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D KO561_05040 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D KO561_11820 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D KO561_12585 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D KO561_20305 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D KO561_02425 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D KO561_02435 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D KO561_02420 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D KO561_08325 nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D KO561_14790 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D KO561_09110 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rax03012]
D KO561_09080 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D KO561_12345 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D KO561_02440 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D KO561_09015 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D KO561_00430 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D KO561_00425 fusA; elongation factor G K02355 fusA; elongation factor G
D KO561_17500 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D KO561_09025 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D KO561_17495 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D KO561_20195 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D KO561_00560 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D KO561_10960 efp; elongation factor P K02356 efp; elongation factor P
D KO561_15220 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D KO561_15145 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:rax03110]
D KO561_00300 clpC; ATP-dependent protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D KO561_03385 ATP-dependent Clp protease ATP-binding subunit K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D KO561_12160 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D KO561_08825 hslU; HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D KO561_11450 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D KO561_02465 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KO561_11445 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D KO561_20320 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D KO561_11455 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D KO561_02765 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D KO561_02460 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D KO561_20315 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D KO561_17430 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D KO561_10620 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D KO561_05945 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D KO561_12250 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:rax04131]
D KO561_10345 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D KO561_01720 flotillin family protein K07192 FLOT; flotillin
D KO561_14880 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KO561_01130 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_03945 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_09945 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_12445 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D KO561_05830 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:rax03032]
D KO561_06795 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D KO561_10085 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D KO561_10365 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D KO561_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D KO561_19885 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D KO561_11320 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D KO561_12360 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D KO561_19950 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KO561_12475 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KO561_09055 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D KO561_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KO561_11495 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KO561_20085 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KO561_07600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KO561_01390 3'-5' exoribonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KO561_00180 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KO561_08780 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D KO561_12280 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D KO561_12395 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KO561_02875 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D KO561_09620 5'-3' exonuclease K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-]
D KO561_05195 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D KO561_00035 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D KO561_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D KO561_09550 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D KO561_09545 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D KO561_08810 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D KO561_07690 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D KO561_17930 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rax03036]
D KO561_08705 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D KO561_01720 flotillin family protein K07192 FLOT; flotillin
D KO561_10365 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D KO561_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D KO561_09320 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D KO561_09330 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D KO561_08715 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D KO561_10605 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D KO561_10600 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D KO561_08445 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D KO561_20250 septum formation initiator family protein K13052 divIC; cell division protein DivIC
D KO561_15185 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D KO561_09195 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D KO561_08375 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D KO561_08425 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D KO561_08190 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D KO561_08410 spoVE; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D KO561_15180 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D KO561_08450 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D KO561_19225 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D KO561_12275 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D KO561_00655 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D KO561_05370 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D KO561_04660 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D KO561_11935 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D KO561_11930 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D KO561_08505 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D KO561_08490 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D KO561_03270 mreBH; rod-share determining protein MreBH K03569 mreB; rod shape-determining protein MreB and related proteins
D KO561_11950 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KO561_17185 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KO561_11945 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D KO561_11940 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D KO561_06945 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D KO561_06495 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D KO561_19995 AAA family ATPase K03496 parA; chromosome partitioning protein
D KO561_19990 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KO561_20000 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KO561_09550 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D KO561_09545 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D KO561_20015 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D KO561_20010 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D KO561_08815 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D KO561_10685 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D KO561_20230 mazG; nucleoside triphosphate pyrophosphohydrolase K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D KO561_00660 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D KO561_12145 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
D KO561_15025 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:rax03400]
D KO561_19075 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D KO561_00055 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D KO561_01555 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D KO561_03640 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D KO561_10170 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D KO561_07395 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D KO561_13275 ytkD; nucleoside triphosphatase YtkD K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D KO561_14490 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D KO561_15040 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D KO561_05000 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D KO561_05760 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D KO561_19080 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D KO561_07665 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D KO561_12390 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D KO561_11285 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D KO561_11770 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D KO561_02875 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D KO561_12395 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KO561_15120 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D KO561_15125 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D KO561_12245 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D KO561_02870 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KO561_18305 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KO561_00400 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D KO561_00405 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D KO561_00580 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D KO561_17575 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D KO561_08595 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D KO561_20205 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D KO561_09305 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D KO561_12260 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D KO561_09310 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D KO561_10890 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D KO561_10885 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D KO561_12475 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KO561_09055 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D KO561_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KO561_11495 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KO561_20085 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KO561_07600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KO561_01390 3'-5' exoribonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KO561_00180 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KO561_19950 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KO561_05195 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D KO561_11690 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D KO561_09265 recA; recombinase RecA K03553 recA; recombination protein RecA
D KO561_11840 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D KO561_11835 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D KO561_08605 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D KO561_10000 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D KO561_00305 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D KO561_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D KO561_08675 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D KO561_11345 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D KO561_00190 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D KO561_10855 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D KO561_10160 recU; Holliday junction resolvase RecU K03700 recU; recombination protein U
D KO561_06160 addA; helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D KO561_06155 addB; helicase-exonuclease AddAB subunit AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D KO561_17720 Ku protein K10979 ku; DNA end-binding protein Ku
D KO561_00035 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D KO561_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D KO561_08810 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D KO561_10365 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D KO561_10515 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D KO561_17795 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D KO561_10755 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D KO561_13300 DNA polymerase IV K03502 umuC; DNA polymerase V
D KO561_09395 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D KO561_03605 recX; recombination regulator RecX K03565 recX; regulatory protein
D KO561_12265 polX; DNA polymerase/3'-5' exonuclease PolX K02347 polX; DNA polymerase (family X)
D KO561_07725 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D KO561_10205 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D KO561_02520 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D KO561_02515 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D KO561_12495 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:rax03029]
D KO561_09080 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D KO561_12345 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D KO561_09015 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D KO561_00430 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D KO561_00425 fusA; elongation factor G K02355 fusA; elongation factor G
D KO561_11355 era; GTPase Era K03595 era; GTPase
D KO561_12665 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KO561_13220 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KO561_11735 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D KO561_02110 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KO561_17590 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KO561_02915 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D KO561_02920 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D KO561_02910 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D KO561_19950 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KO561_11450 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D KO561_11455 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D KO561_02465 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KO561_02460 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D KO561_11445 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D KO561_11705 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_12590 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_19645 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_00660 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D KO561_08200 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D KO561_08195 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D KO561_20030 spoIIIJ; YidC family membrane integrase SpoIIIJ K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KO561_08025 SCO family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rax02000]
D KO561_03655 ABC transporter ATP-binding protein/permease K24708 K24708; ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-]
D KO561_05485 ABC transporter ATP-binding protein/permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D KO561_08065 ABC transporter ATP-binding protein/permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D KO561_05490 ABC transporter ATP-binding protein/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D KO561_08070 ABC transporter ATP-binding protein/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D KO561_18320 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D KO561_18315 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D KO561_18755 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D KO561_05780 ATP-binding cassette domain-containing protein K18231 msr; macrolide transport system ATP-binding/permease protein
D KO561_17810 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D KO561_13995 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D KO561_13990 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D KO561_14920 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D KO561_14915 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D KO561_14910 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D KO561_03880 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D KO561_16675 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D KO561_03875 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D KO561_16665 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D KO561_03870 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D KO561_16670 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D KO561_15750 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D KO561_18230 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D KO561_18225 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D KO561_18220 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D KO561_18235 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D KO561_15765 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D KO561_17950 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D KO561_17960 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D KO561_17945 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D KO561_17955 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D KO561_02555 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D KO561_02625 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D KO561_05975 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D KO561_05465 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D KO561_05970 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D KO561_05470 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D KO561_05965 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D KO561_01285 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D KO561_18785 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D KO561_01275 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D KO561_01270 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D KO561_18780 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D KO561_05860 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D KO561_19185 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D KO561_18965 ABC transporter substrate-binding protein K25086 musE; maltose transport system substrate-binding protein
D KO561_18960 sugar ABC transporter permease K25087 musF; maltose transport system permease protein
D KO561_18955 carbohydrate ABC transporter permease K25088 musG; maltose transport system permease protein
D KO561_15940 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D KO561_06705 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D KO561_07560 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D KO561_14425 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D KO561_16155 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D KO561_16285 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D KO561_15935 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_06710 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_07565 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_14420 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_15985 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_16150 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_16280 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D KO561_15980 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_15930 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_16145 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_06715 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_07570 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_14415 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_16275 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D KO561_15410 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D KO561_15405 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D KO561_15400 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D KO561_17385 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D KO561_17390 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D KO561_17380 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D KO561_17375 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D KO561_15500 extracellular solute-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D KO561_15495 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D KO561_15490 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D KO561_16600 extracellular solute-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D KO561_19285 sugar ABC transporter substrate-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D KO561_16595 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein
D KO561_19290 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein
D KO561_16590 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein
D KO561_19295 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein
D KO561_16465 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D KO561_16475 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D KO561_16470 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D KO561_17305 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D KO561_17295 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D KO561_17300 xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D KO561_16690 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D KO561_16695 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D KO561_16975 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D KO561_16700 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D KO561_16980 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D KO561_01940 ABC transporter substrate-binding protein K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D KO561_01950 sugar ABC transporter permease K17235 araP; arabinooligosaccharide transport system permease protein
D KO561_01955 carbohydrate ABC transporter permease K17236 araQ; arabinooligosaccharide transport system permease protein
D KO561_16390 sugar ABC transporter permease K25677 yesP; pectin-derived oligosaccharide transport system permease protein
D KO561_16385 carbohydrate ABC transporter permease K25678 yesQ; pectin-derived oligosaccharide transport system permease protein
D KO561_09205 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D KO561_13230 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D KO561_09215 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D KO561_09220 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D KO561_09210 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D KO561_06870 fetB; iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein
D KO561_06875 phosphate ABC transporter ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D KO561_19200 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D KO561_16030 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D KO561_16820 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D KO561_19190 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D KO561_15880 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D KO561_16025 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D KO561_16815 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D KO561_19195 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D KO561_11205 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D KO561_11200 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D KO561_11195 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D KO561_11190 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D KO561_18115 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D KO561_19400 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D KO561_14650 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D KO561_14645 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D KO561_18125 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D KO561_18130 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D KO561_19385 ABC transporter permease subunit K02042 phnE; phosphonate transport system permease protein
D KO561_19390 ABC transporter permease subunit K02042 phnE; phosphonate transport system permease protein
D KO561_14640 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D KO561_18120 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D KO561_19395 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D KO561_16200 transporter substrate-binding domain-containing protein K10036 glnH; glutamine transport system substrate-binding protein
D KO561_16205 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein
D KO561_18500 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein
D KO561_16210 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D KO561_01530 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D KO561_03345 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D KO561_01535 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D KO561_03350 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D KO561_01540 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D KO561_04380 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D KO561_13700 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D KO561_17320 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D KO561_04375 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D KO561_13705 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D KO561_17325 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D KO561_04370 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D KO561_13710 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D KO561_17330 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D KO561_01495 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D KO561_01500 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D KO561_01505 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D KO561_12135 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D KO561_12130 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D KO561_06385 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D KO561_06390 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D KO561_06395 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein
D KO561_06400 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D KO561_06405 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D KO561_17270 peptide ABC transporter substrate-binding protein K16199 dppE; dipeptide transport system substrate-binding protein
D KO561_17285 ABC transporter permease K16200 dppB1; dipeptide transport system permease protein
D KO561_17280 ABC transporter permease K16201 dppC; dipeptide transport system permease protein
D KO561_17275 ABC transporter ATP-binding protein K16202 dppD; dipeptide transport system ATP-binding protein
D KO561_14985 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D KO561_14990 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D KO561_14995 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D KO561_14975 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D KO561_14980 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D KO561_17255 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D KO561_02635 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D KO561_02640 iron ABC transporter permease K23228 fhuB; ferric hydroxamate transport system permease protein
D KO561_07775 iron-hydroxamate ABC transporter substrate-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D KO561_14250 iron-hydroxamate ABC transporter substrate-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D KO561_07780 iron ABC transporter permease K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D KO561_14255 iron ABC transporter permease K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D KO561_07785 iron ABC transporter permease K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D KO561_14260 iron ABC transporter permease K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D KO561_07770 ABC transporter ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D KO561_00905 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D KO561_00900 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D KO561_00895 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D KO561_00890 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D KO561_14750 iron-siderophore ABC transporter substrate-binding protein K25109 sirA; iron-siderophore transport system substrate-binding protein
D KO561_14755 iron ABC transporter permease K25110 sirB; iron-siderophore transport system permease protein
D KO561_14760 iron ABC transporter permease K25111 sirC; iron-siderophore transport system permease protein
D KO561_13295 ABC transporter ATP-binding protein K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D KO561_13845 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D KO561_13855 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein
D KO561_13860 ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein
D KO561_13850 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D KO561_07420 metal ABC transporter substrate-binding protein K19975 mntC; manganese transport system substrate-binding protein
D KO561_07425 metal ABC transporter permease K19976 mntB; manganese transport system permease protein
D KO561_07430 metal ABC transporter ATP-binding protein K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D KO561_02610 ZinT/AdcA family metal-binding protein K09815 znuA; zinc transport system substrate-binding protein
D KO561_13760 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D KO561_14375 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D KO561_02605 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D KO561_13770 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D KO561_02600 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D KO561_13765 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D KO561_04930 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D KO561_13475 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D KO561_16105 ECF transporter S component K16923 qrtT; energy-coupling factor transport system substrate-specific component
D KO561_14125 ECF-type riboflavin transporter substrate-binding protein K16924 mtsT; energy-coupling factor transport system substrate-specific component
D KO561_10545 ECF transporter S component K16927 cbrT; energy-coupling factor transport system substrate-specific component
D KO561_00600 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D KO561_14115 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D KO561_01215 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D KO561_00590 energy-coupling factor ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D KO561_00595 energy-coupling factor ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D KO561_16090 energy-coupling factor ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D KO561_01220 ATP-binding cassette domain-containing protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D KO561_14120 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D KO561_04800 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D KO561_03555 ATP-binding cassette domain-containing protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D KO561_04565 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D KO561_19515 ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein
D KO561_04300 ABC transporter permease K11636 yxdM; putative ABC transport system permease protein
D KO561_04295 ABC transporter ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D KO561_09890 ABC transporter ATP-binding protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
D KO561_11045 ABC transporter permease K16918 ytrF; acetoin utilization transport system permease protein
D KO561_11060 DUF6449 domain-containing protein K16919 ytrC_D; acetoin utilization transport system permease protein
D KO561_11050 ABC transporter ATP-binding protein K16920 ytrE; acetoin utilization transport system ATP-binding protein
D KO561_11065 ABC transporter ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D KO561_15180 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D KO561_15185 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D KO561_03175 ABC-2 family transporter protein K25154 evrC; viologen exporter family transport system permease protein
D KO561_03170 ABC-2 family transporter protein K25155 evrB; viologen exporter family transport system permease protein
D KO561_03165 ABC transporter ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D KO561_06005 ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D KO561_06015 EcsC family protein K25159 ecsC; protein EcsC
D KO561_03405 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D KO561_01800 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D KO561_03985 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D KO561_05895 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D KO561_16055 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D KO561_06825 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D KO561_01795 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KO561_02495 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KO561_03400 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KO561_03980 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KO561_05890 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KO561_06830 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KO561_16060 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KO561_18900 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KO561_19360 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KO561_01330 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KO561_01410 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D KO561_01325 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KO561_01400 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KO561_04070 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KO561_13690 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D KO561_05430 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D KO561_18655 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D KO561_07495 sugar efflux transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D KO561_01745 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D KO561_19610 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D KO561_18325 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D KO561_06755 MFS transporter K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump
D KO561_14735 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D KO561_05105 MFS transporter K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D KO561_04670 MFS transporter K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D KO561_05935 MFS transporter K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D KO561_02995 MFS transporter K08164 ybcL; MFS transporter, DHA1 family, putative efflux transporter
D KO561_05815 MFS transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D KO561_09660 MFS transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D KO561_05830 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D KO561_11215 MFS transporter K08222 yqgE; MFS transporter, YQGE family, putative transporter
D KO561_14820 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D KO561_13460 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D KO561_14740 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D KO561_14815 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D KO561_03265 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D KO561_20220 ptsG; glucose-specific PTS transporter subunit IIBC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D KO561_02570 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D KO561_07650 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D KO561_19050 beta-glucoside-specific PTS transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D KO561_01190 treP; PTS system trehalose-specific EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D KO561_15720 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D KO561_18615 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D KO561_18625 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D KO561_01175 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D KO561_18525 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D KO561_01180 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D KO561_18535 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D KO561_01170 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D KO561_18530 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D KO561_15575 PTS glucitol/sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D KO561_15580 PTS glucitol/sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D KO561_01055 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D KO561_15560 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D KO561_01060 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D KO561_15555 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D KO561_01065 galactitol-specific PTS transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D KO561_15550 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D KO561_02700 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D KO561_02705 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D KO561_15615 PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D KO561_15640 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D KO561_13180 potassium channel family protein K10716 kch; voltage-gated potassium channel
D KO561_04085 ion channel K08713 lctB; potassium channel LctB
D KO561_01380 ammonium transporter K03320 amt; ammonium transporter, Amt family
D KO561_20295 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D KO561_06970 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D KO561_01545 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D KO561_08060 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D KO561_19970 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D KO561_06500 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D KO561_12700 motP; flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D KO561_14035 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D KO561_12695 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D KO561_14030 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D KO561_17000 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D KO561_05630 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D KO561_17920 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D KO561_09860 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D KO561_14050 zupT; zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D KO561_18600 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D KO561_01910 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump
D KO561_06610 multidrug efflux SMR transporter K18924 ykkC; paired small multidrug resistance pump
D KO561_06605 multidrug efflux SMR transporter K18925 ykkD; paired small multidrug resistance pump
D KO561_19575 EamA family transporter K03298 TC.DME; drug/metabolite transporter, DME family
D KO561_17875 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D KO561_03900 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D KO561_19325 GntP family permease K06156 gntU; Gnt-I system low-affinity gluconate transporter
D KO561_14635 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter
D KO561_15905 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D KO561_06915 BCCT family transporter K05020 opuD; glycine betaine transporter
D KO561_09720 BCCT family transporter K05020 opuD; glycine betaine transporter
D KO561_18300 BCCT family transporter K05020 opuD; glycine betaine transporter
D KO561_02895 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D KO561_13925 cation acetate symporter K14393 actP; cation/acetate symporter
D KO561_05730 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D KO561_16745 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D KO561_13630 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D KO561_05575 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D KO561_15670 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D KO561_13455 potassium transporter TrkA K07228 khtT; K+:H+ antiporter subunit KhtT
D KO561_13450 cation:proton antiporter K26732 khtU; K+:H+ antiporter subunit KhtU
D KO561_02725 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D KO561_07860 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D KO561_08075 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D KO561_18930 uraA; uracil permease K02824 uraA; uracil permease
D KO561_02750 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D KO561_15155 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D KO561_05410 NupC/NupG family nucleoside CNT transporter K11535 nupC; nucleoside transport protein
D KO561_06685 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D KO561_15430 chromate transporter K07240 chrA; chromate transporter
D KO561_15435 chromate transporter K07240 chrA; chromate transporter
D KO561_13800 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D KO561_16325 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D KO561_17765 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D KO561_11255 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D KO561_11420 Na/Pi symporter K03324 yjbB; phosphate:Na+ symporter
D KO561_02095 arsenic transporter K03893 arsB; arsenical pump membrane protein
D KO561_11570 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D KO561_09430 Na(+)/H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D KO561_11575 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D KO561_11580 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D KO561_11585 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D KO561_11590 Na(+)/H(+) antiporter subunit F1 K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D KO561_11595 mnhG; monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D KO561_11790 spoVB; stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D KO561_18545 AEC family transporter K24180 mleP; malate permease and related proteins
D KO561_18635 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D KO561_05795 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D KO561_05800 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D KO561_07625 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D KO561_16535 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D KO561_09670 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D KO561_07620 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D KO561_09675 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D KO561_13360 ECF transporter S component K23675 fmnP; riboflavin transporter
D KO561_07880 thiT; energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter
D KO561_04875 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D KO561_10080 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D KO561_08190 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D KO561_08410 spoVE; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D KO561_09425 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D KO561_16935 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D KO561_16940 Wzz/FepE/Etk N-terminal domain-containing protein K19420 epsA; protein tyrosine kinase modulator
D KO561_00280 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:rax02044]
D KO561_12005 GspE/PulE family protein K02652 pilB; type IV pilus assembly protein PilB
D KO561_12000 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D KO561_08495 YggT family protein K02221 yggT; YggT family protein
D KO561_11515 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D KO561_11510 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D KO561_11520 comER; late competence protein ComER K02239 comER; competence protein ComER
D KO561_15345 DEAD/DEAH box helicase K02240 comFA; competence protein ComFA
D KO561_15340 hypothetical protein K02242 comFC; competence protein ComFC
D KO561_11085 prepilin-type N-terminal cleavage/methylation domain-containing protein K02245 comGC; competence protein ComGC
D KO561_11100 ComGF family competence protein K02248 comGF; competence protein ComGF
D KO561_11985 A24 family peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D KO561_06120 competence protein ComK K02250 comK; competence protein ComK
D KO561_08950 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D KO561_08945 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D KO561_08790 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D KO561_08850 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D KO561_08865 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D KO561_08915 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D KO561_08925 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D KO561_08930 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D KO561_08935 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D KO561_08940 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D KO561_15225 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D KO561_11780 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D KO561_00365 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D KO561_14800 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D KO561_00540 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D KO561_08730 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D KO561_08720 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D KO561_11815 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D KO561_20030 spoIIIJ; YidC family membrane integrase SpoIIIJ K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KO561_10040 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D KO561_10035 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rax02042]
D KO561_05630 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D KO561_07115 hemolysin III family protein K11068 hlyIII; hemolysin III
D KO561_08035 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:rax02022]
D KO561_12400 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D KO561_12405 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D KO561_02060 response regulator transcription factor K07770 cssR; two-component system, OmpR family, response regulator CssR
D KO561_10555 ATP-binding protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D KO561_06265 response regulator K07775 resD; two-component system, OmpR family, response regulator ResD
D KO561_10560 response regulator transcription factor K07775 resD; two-component system, OmpR family, response regulator ResD
D KO561_19860 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D KO561_19865 yycF; response regulator YycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D KO561_04290 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D KO561_04075 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D KO561_04285 response regulator transcription factor K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D KO561_15360 sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D KO561_15355 response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU
D KO561_01340 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D KO561_01345 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D KO561_15690 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D KO561_06045 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D KO561_06050 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
D KO561_15685 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
D KO561_17560 response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D KO561_10845 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D KO561_07605 sensor histidine kinase K11637 citS; two-component system, CitB family, sensor histidine kinase CitS [EC:2.7.13.3]
D KO561_07610 response regulator K11638 K11638; two-component system, CitB family, response regulator CitT
D KO561_16305 sensor histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D KO561_16310 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D KO561_15010 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D KO561_13400 sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D KO561_13405 LytTR family DNA-binding domain-containing protein K07705 lytT; two-component system, LytTR family, response regulator LytT
D KO561_08970 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KO561_08920 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KO561_09435 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KO561_08965 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D KO561_06700 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D KO561_14435 response regulator K07720 yesN; two-component system, response regulator YesN
D KO561_15415 response regulator K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:rax02035]
D KO561_08970 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KO561_08975 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D KO561_13835 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D KO561_13840 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D KO561_08980 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D KO561_08985 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D KO561_10340 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D KO561_08965 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D KO561_08920 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KO561_09435 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KO561_03425 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_09355 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_06560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_18010 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_19470 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KO561_08865 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D KO561_08870 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D KO561_08925 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D KO561_08930 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D KO561_08935 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D KO561_08940 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D KO561_08950 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D KO561_08945 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D KO561_08855 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D KO561_08910 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D KO561_08915 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D KO561_08850 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D KO561_08905 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D KO561_08845 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D KO561_08835 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D KO561_08840 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D KO561_08885 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D KO561_17180 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF
D KO561_17175 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D KO561_08895 flgG; flagellar basal body rod protein FlgG K02390 flgE; flagellar hook protein FlgE
D KO561_15295 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D KO561_15290 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D KO561_15270 flagellin K02406 fliC; flagellin
D KO561_15250 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D KO561_08990 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D KO561_12700 motP; flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D KO561_14035 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D KO561_12695 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D KO561_14030 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D KO561_01530 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D KO561_03345 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D KO561_15280 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D KO561_15305 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D KO561_08955 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D KO561_08960 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D KO561_12000 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D KO561_12005 GspE/PulE family protein K02652 pilB; type IV pilus assembly protein PilB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rax04812]
D KO561_03270 mreBH; rod-share determining protein MreBH K03569 mreB; rod shape-determining protein MreB and related proteins
D KO561_11950 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KO561_17185 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KO561_08450 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D KO561_19225 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D KO561_08445 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D KO561_11935 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D KO561_11930 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D KO561_19995 AAA family ATPase K03496 parA; chromosome partitioning protein
D KO561_19990 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KO561_20000 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rax04147]
D KO561_14860 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KO561_14880 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KO561_14875 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D KO561_12445 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D KO561_18570 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D KO561_01720 flotillin family protein K07192 FLOT; flotillin
D KO561_02465 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KO561_11450 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D KO561_13415 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D KO561_00050 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D KO561_00430 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D KO561_06000 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D KO561_19115 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D KO561_00545 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D KO561_11765 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D KO561_01860 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D KO561_16660 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D KO561_01855 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D KO561_18145 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D KO561_15635 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D KO561_09380 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KO561_12100 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D KO561_07050 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KO561_07055 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KO561_16575 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KO561_19935 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KO561_02830 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D KO561_08120 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_10800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_15595 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KO561_19150 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D KO561_14870 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D KO561_01130 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_03945 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KO561_09945 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:rax02048]
D KO561_05195 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D KO561_12555 class I SAM-dependent methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D KO561_12915 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D KO561_02270 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D KO561_02265 antitoxin K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D KO561_08450 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D KO561_19225 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D KO561_03270 mreBH; rod-share determining protein MreBH K03569 mreB; rod shape-determining protein MreB and related proteins
D KO561_11950 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KO561_17185 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KO561_09550 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D KO561_09545 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D KO561_11705 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_12590 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KO561_19645 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:rax01504]
D KO561_05440 AAC(3) family N-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D KO561_02975 aminoglycoside phosphotransferase family protein K17910 aphD; aminoglycoside 2''-phosphotransferase [EC:2.7.1.190]
D KO561_13630 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D KO561_05780 ATP-binding cassette domain-containing protein K18231 msr; macrolide transport system ATP-binding/permease protein
D KO561_04305 vanY; VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D KO561_05825 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rax00537]
D KO561_07050 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KO561_07055 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KO561_18570 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rax03100]
D KO561_00260 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D KO561_00695 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D KO561_00750 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D KO561_03580 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D KO561_00250 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D KO561_02370 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D KO561_12180 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D KO561_14970 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D KO561_00115 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D KO561_00710 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D KO561_02330 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D KO561_04150 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D KO561_11250 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D KO561_02345 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D KO561_02410 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D KO561_04175 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D KO561_04210 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D KO561_00740 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D KO561_11110 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D KO561_02350 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D KO561_04200 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D KO561_00720 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D KO561_02340 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D KO561_04160 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D KO561_00240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D KO561_02380 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D KO561_05030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D KO561_12175 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D KO561_04205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D KO561_04195 tRNA-His K14226 tRNA-His; tRNA His
D KO561_11240 tRNA-His K14226 tRNA-His; tRNA His
D KO561_00690 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D KO561_02385 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D KO561_04215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D KO561_00245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D KO561_02360 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D KO561_02365 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D KO561_00235 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D KO561_00230 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D KO561_00745 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D KO561_02355 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D KO561_11235 tRNA-Ile K14230 tRNA-Met; tRNA Met
D KO561_02405 tRNA-Met K14230 tRNA-Met; tRNA Met
D KO561_04170 tRNA-Met K14230 tRNA-Met; tRNA Met
D KO561_05705 tRNA-Met K14230 tRNA-Met; tRNA Met
D KO561_11245 tRNA-Met K14230 tRNA-Met; tRNA Met
D KO561_20260 tRNA-Met K14230 tRNA-Met; tRNA Met
D KO561_04180 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D KO561_11225 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D KO561_00255 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D KO561_02375 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D KO561_00090 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D KO561_02335 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D KO561_04155 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D KO561_11230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D KO561_14170 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D KO561_00225 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D KO561_00715 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D KO561_00730 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D KO561_04190 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D KO561_04185 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D KO561_00735 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D KO561_00220 tRNA-Val K14237 tRNA-Val; tRNA Val
D KO561_00725 tRNA-Val K14237 tRNA-Val; tRNA Val
D KO561_06580 tRNA-Val K14237 tRNA-Val; tRNA Val
D KO561_04165 tRNA-Val K14237 tRNA-Val; tRNA Val
D KO561_00265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_02390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_04135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_05690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_13215 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_20045 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_00205 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_00685 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D KO561_04140 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_00700 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_00270 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_02395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_05695 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_13210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_00210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_20050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D KO561_04145 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_00215 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_00705 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_13205 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_20055 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_05700 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_02400 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_00275 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D KO561_00175 ffs; signal recognition particle sRNA large type K01983 ffs; SRP RNA
D KO561_10120 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D KO561_14775 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D KO561_05765 (S)-benzoin forming benzil reductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D KO561_00855 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D KO561_16555 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D KO561_01120 aldo/keto reductase K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-]
D KO561_19805 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D KO561_01640 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D KO561_15610 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D KO561_15605 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D KO561_19455 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D KO561_07045 zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D KO561_10745 namA; NADPH dehydrogenase NamA K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D KO561_10465 YpdA family putative bacillithiol disulfide reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D KO561_09610 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D KO561_09970 msrB; peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D KO561_05980 glutathione S-transferase C-terminal domain-containing protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D KO561_07855 manganese catalase family protein K07217 ydbD; manganese catalase [EC:1.11.1.6]
D KO561_09515 manganese catalase family protein K07217 ydbD; manganese catalase [EC:1.11.1.6]
D KO561_15510 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D KO561_04090 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D KO561_01695 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D KO561_04365 LLM class flavin-dependent oxidoreductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D KO561_07550 LLM class flavin-dependent oxidoreductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D KO561_17315 LLM class flavin-dependent oxidoreductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D KO561_13500 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D KO561_02100 arsC; arsenate reductase (thioredoxin) K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D KO561_10115 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D KO561_01315 GNAT family N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D KO561_03850 maa; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D KO561_05425 acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D KO561_06935 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D KO561_14090 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D KO561_12675 GNAT family N-acetyltransferase K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-]
D KO561_10235 bshA; N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D KO561_15075 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D KO561_01260 fosB; metallothiol transferase FosB K11210 fosB; metallothiol transferase [EC:2.5.1.-]
D KO561_17070 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K19430 epsN; pyridoxal phosphate-dependent aminotransferase EpsN [EC:2.6.1.-]
D KO561_06730 ROK family protein K18673 bglK; beta-glucoside kinase [EC:2.7.1.85]
D KO561_15505 ROK family protein K18673 bglK; beta-glucoside kinase [EC:2.7.1.85]
D KO561_05710 phosphotransferase K23983 amiN; amicoumacin kinase [EC:2.7.1.230]
D KO561_08660 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D KO561_07535 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D KO561_11325 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D KO561_00780 cdaA; diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D KO561_06635 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D KO561_10655 spoIIAB; anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D KO561_15080 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D KO561_00295 protein arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D KO561_14795 alpha/beta fold hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D KO561_09485 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D KO561_20290 spoIIE; stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D KO561_16930 tyrosine protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D KO561_11560 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D KO561_19895 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D KO561_11375 HD family phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D KO561_01265 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D KO561_20125 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D KO561_20135 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D KO561_16295 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D KO561_15860 family 43 glycosylhydrolase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D KO561_16490 alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D KO561_16435 glycosyl hydrolase family 8 K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156]
D KO561_16380 glycoside hydrolase family 88 protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D KO561_14410 yicI; alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D KO561_04415 glycoside hydrolase family 18 protein K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-]
D KO561_00165 glycoside hydrolase family 18 protein K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-]
D KO561_08095 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D KO561_03375 pdaA; delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D KO561_15110 bshB2; bacillithiol biosynthesis deacetylase BshB2 K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D KO561_18340 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D KO561_02730 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D KO561_09700 uvsE; UV DNA damage repair endonuclease UvsE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D KO561_01765 splB; spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D KO561_13245 tetraprenyl-beta-curcumene synthase family protein K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130]
D KO561_03340 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D KO561_05610 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D KO561_15020 HPr family phosphocarrier protein K11184 chr; catabolite repression HPr-like protein
D KO561_12680 acetoin utilization AcuB family protein K04767 acuB; acetoin utilization protein AcuB
D KO561_12685 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
C 99982 Energy metabolism
D KO561_07915 zinc-binding dehydrogenase K13955 yogA; zinc-binding alcohol dehydrogenase/oxidoreductase
D KO561_10525 ferredoxin K05337 fer; ferredoxin
D KO561_11310 cytochrome c K13300 cccA; cytochrome c550
D KO561_13675 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D KO561_07630 tcuA; FAD-dependent tricarballylate dehydrogenase TcuA K13796 cobZ; tricarballylate dehydrogenase
D KO561_19145 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D KO561_06230 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D KO561_15350 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D KO561_05675 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D KO561_02525 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D KO561_15515 VOC family protein K08234 yaeR; glyoxylase I family protein
D KO561_08485 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D KO561_08570 cell wall hydrolase K01449 cwlJ; cell wall hydrolase
D KO561_09850 cell wall hydrolase K01449 cwlJ; cell wall hydrolase
D KO561_17690 cell wall hydrolase K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D KO561_10610 GNAT family N-acetyltransferase K02859 ribT; riboflavin biosynthesis RibT protein
C 99988 Secondary metabolism
C 99999 Others
D KO561_01145 ring-cleaving dioxygenase K15975 K15975; glyoxalase family protein
D KO561_18260 ring-cleaving dioxygenase K15975 K15975; glyoxalase family protein
D KO561_09960 alpha/beta hydrolase K06999 K06999; phospholipase/carboxylesterase
D KO561_10780 BrxA/BrxB family bacilliredoxin K26958 brxA_B; bacilliredoxin
D KO561_13890 BrxA/BrxB family bacilliredoxin K26958 brxA_B; bacilliredoxin
D KO561_12720 ytxJ; bacillithiol system redox-active protein YtxJ K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D KO561_01430 cold-shock protein K03704 cspA; cold shock protein
D KO561_02015 cold shock domain-containing protein K03704 cspA; cold shock protein
D KO561_10075 cold-shock protein K03704 cspA; cold shock protein
D KO561_06420 spxA; transcriptional regulator SpxA K16509 spxA; regulatory protein spx
D KO561_02315 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
D KO561_08585 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A
D KO561_00025 DUF370 domain-containing protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D KO561_13425 yugI; S1 domain-containing post-transcriptional regulator GSP13 K07570 GSP13; general stress protein 13
D KO561_20255 S1 domain-containing RNA-binding protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D KO561_00290 UvrB/UvrC motif-containing protein K19411 mcsA; protein arginine kinase activator
D KO561_12165 tig; trigger factor K03545 tig; trigger factor
D KO561_14780 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D KO561_02530 hypothetical protein K06191 nrdH; glutaredoxin-like protein NrdH
D KO561_10570 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D KO561_11405 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
D KO561_06425 mecA; adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2
D KO561_10475 genetic competence negative regulator K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D KO561_03730 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D KO561_11955 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D KO561_20105 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D KO561_08805 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D KO561_10175 DnaD domain-containing protein K02086 dnaD; DNA replication protein
D KO561_13725 toprim domain-containing protein K07476 yusF; toprim domain protein
D KO561_11720 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D KO561_12985 AAA family ATPase K07505 repA; regulatory protein RepA
D KO561_01520 IS110 family transposase K07486 K07486; transposase
D KO561_01915 IS110 family transposase K07486 K07486; transposase
D KO561_02235 IS110 family transposase K07486 K07486; transposase
D KO561_08415 IS110 family transposase K07486 K07486; transposase
D KO561_08420 IS110 family transposase K07486 K07486; transposase
D KO561_08775 IS110 family transposase K07486 K07486; transposase
D KO561_08995 IS110 family transposase K07486 K07486; transposase
D KO561_13740 IS110 family transposase K07486 K07486; transposase
D KO561_20190 IS110 family transposase K07486 K07486; transposase
D KO561_20275 IS110 family transposase K07486 K07486; transposase
D KO561_04015 IS110 family transposase K07486 K07486; transposase
D KO561_17650 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D KO561_18415 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D KO561_12530 PspA/IM30 family protein K03969 pspA; phage shock protein A
D KO561_00185 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D KO561_01675 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D KO561_19345 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D KO561_16240 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D KO561_03065 sodium/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D KO561_07225 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D KO561_13625 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D KO561_03320 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D KO561_07265 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D KO561_00200 pro-sigmaK processing inhibitor BofA family protein K06317 bofA; inhibitor of the pro-sigma K processing machinery
D KO561_11845 intercompartmental signaling factor BofC K06318 bofC; forespore regulator of the sigma-K checkpoint
D KO561_09295 outer spore coat protein CotE K06328 cotE; spore coat protein E
D KO561_10490 spore coat associated protein CotJA K06332 cotJA; spore coat protein JA
D KO561_10495 spore coat protein CotJB K06333 cotJB; spore coat protein JB
D KO561_10500 manganese catalase family protein K06334 cotJC; spore coat protein JC
D KO561_06520 spore coat protein K06343 cotY_Z; CotY/CotZ family spore coat protein
D KO561_20025 protein jag K06346 jag; spoIIIJ-associated protein
D KO561_00670 KinB-signaling pathway activation protein K06349 kbaA; KinB signaling pathway activation protein
D KO561_15455 pxpB; 5-oxoprolinase subunit PxpB K06351 kipI; inhibitor of KinA
D KO561_03240 sporulation histidine kinase inhibitor Sda K06371 sda; developmental checkpoint coupling sporulation initiation to replication initiation
D KO561_04925 sporulation histidine kinase inhibitor Sda K06371 sda; developmental checkpoint coupling sporulation initiation to replication initiation
D KO561_06595 sporulation histidine kinase inhibitor Sda K06371 sda; developmental checkpoint coupling sporulation initiation to replication initiation
D KO561_11565 sporulation histidine kinase inhibitor Sda K06371 sda; developmental checkpoint coupling sporulation initiation to replication initiation
D KO561_16430 sporulation histidine kinase inhibitor Sda K06371 sda; developmental checkpoint coupling sporulation initiation to replication initiation
D KO561_10590 spore maturation protein K06373 spmA; spore maturation protein A
D KO561_10585 spore maturation protein K06374 spmB; spore maturation protein B
D KO561_08000 aspartyl-phosphate phosphatase Spo0E family protein K06376 spo0E; stage 0 sporulation regulatory protein
D KO561_19475 sporulation protein K06377 spo0M; sporulation-control protein
D KO561_10660 spoIIAA; anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D KO561_10700 spoIIM; stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D KO561_11480 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D KO561_17235 M23 family metallopeptidase K06386 spoIIQ; stage II sporulation protein Q
D KO561_17490 spoIIR; stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D KO561_10955 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D KO561_10950 stage III sporulation protein SpoAB K06391 spoIIIAB; stage III sporulation protein AB
D KO561_10945 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D KO561_10940 spoIIIAD; stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D KO561_10935 spoIIIAE; stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D KO561_10930 spoIIIAF; stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D KO561_10925 spoIIIAG; stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D KO561_10920 SpoIIIAH-like family protein K06397 spoIIIAH; stage III sporulation protein AH
D KO561_10375 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D KO561_10645 stage V sporulation protein AA K06403 spoVAA; stage V sporulation protein AA
D KO561_10640 stage V sporulation protein AB K06404 spoVAB; stage V sporulation protein AB
D KO561_07930 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D KO561_07925 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D KO561_07920 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D KO561_10635 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D KO561_10630 spore germination protein K06408 spoVAF; stage V sporulation protein AF
D KO561_11145 spore germination protein K06408 spoVAF; stage V sporulation protein AF
D KO561_09135 dpaA; dipicolinic acid synthetase subunit A K06410 spoVFA; dipicolinate synthase subunit A
D KO561_09140 dpaB; dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B
D KO561_20170 spoVG; septation regulator SpoVG K06412 spoVG; stage V sporulation protein G
D KO561_09360 spoVK; stage V sporulation protein K K06413 spoVK; stage V sporulation protein K
D KO561_08645 spoVM; stage V sporulation protein SpoVM K06414 spoVM; stage V sporulation protein M
D KO561_05570 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D KO561_09280 spoVS; stage V sporulation protein SpoVS K06416 spoVS; stage V sporulation protein S
D KO561_05845 alpha/beta-type small acid-soluble spore protein K06418 SASP-A; small acid-soluble spore protein A (major alpha-type SASP)
D KO561_05850 alpha/beta-type small acid-soluble spore protein K06418 SASP-A; small acid-soluble spore protein A (major alpha-type SASP)
D KO561_12580 alpha/beta-type small acid-soluble spore protein K06418 SASP-A; small acid-soluble spore protein A (major alpha-type SASP)
D KO561_13875 alpha/beta-type small acid-soluble spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D KO561_03645 gamma-type small acid-soluble spore protein K06422 sspE; small acid-soluble spore protein E (minor gamma-type SASP)
D KO561_20155 alpha/beta-type small acid-soluble spore protein K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D KO561_12300 sspI; small acid-soluble spore protein SspI K06426 sspI; small acid-soluble spore protein I (minor)
D KO561_03625 small, acid-soluble spore protein K K06428 sspK; small acid-soluble spore protein K (minor)
D KO561_09625 sspL; small, acid-soluble spore protein L K06429 sspL; small acid-soluble spore protein L (minor)
D KO561_06750 sspO; small acid-soluble spore protein O K06432 sspO; small acid-soluble spore protein O (minor)
D KO561_09455 small acid-soluble spore protein P K06433 sspP; small acid-soluble spore protein P (minor)
D KO561_09475 tlp; small acid-soluble spore protein Tlp K06434 tlp; small acid-soluble spore protein (thioredoxin-like protein)
D KO561_20145 yabG; sporulation peptidase YabG K06436 yabG; spore coat assemly protein
D KO561_00665 spore gernimation protein GerD K06294 gerD; spore germination protein D
D KO561_12200 GerMN domain-containing protein K06298 gerM; germination protein M
D KO561_06190 spore germination protein K06299 gerPA; spore germination protein PA
D KO561_06185 spore germination protein GerPB K06300 gerPB; spore germination protein PB
D KO561_06175 spore gernimation protein GerPD K06302 gerPD; spore germination protein PD
D KO561_06165 spore germination protein K06304 gerPF; spore germination protein PF
D KO561_17695 gerQ; spore coat protein GerQ K06305 gerQ; spore germination protein Q
D KO561_06675 spore germination protein K06307 yfkQ; spore germination protein
D KO561_06670 Ger(x)C family spore germination protein K06308 yfkR; spore germination protein
D KO561_10445 ypeB; germination protein YpeB K06313 ypeB; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D KO561_02070 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D KO561_11380 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D KO561_05055 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D KO561_01385 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D KO561_12115 cytochrome c biogenesis protein K02497 hemX; HemX protein
C 99994 Others
D KO561_11185 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D KO561_16120 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D KO561_19415 ATP-binding cassette domain-containing protein K05781 phnK; putative phosphonate transport system ATP-binding protein
D KO561_18475 SdpA family antimicrobial peptide system protein K26994 sdpA; sporulation delaying protein A
D KO561_18470 hypothetical protein K26995 sdpB; sporulation delaying protein B
D KO561_18465 sporulation delaying protein family toxin K26997 sdpC; cannibalism toxin, SdpC family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D KO561_01375 Gfo/Idh/MocA family oxidoreductase K03810 mviM; virulence factor
D KO561_05510 Gfo/Idh/MocA family oxidoreductase K03810 mviM; virulence factor
D KO561_02040 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D KO561_12755 DUF4479 domain-containing protein K06878 K06878; tRNA-binding protein
D KO561_06460 globin K06886 glbN; hemoglobin
D KO561_05445 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D KO561_18920 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D KO561_08315 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D KO561_01250 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D KO561_07015 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D KO561_13670 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D KO561_13685 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D KO561_03635 metal-dependent hydrolase K07038 K07038; inner membrane protein
D KO561_04620 TatD family hydrolase K07048 PTER; phosphotriesterase-related protein
D KO561_03335 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D KO561_12440 fxsA; membrane protein FxsA K07113 fxsA; UPF0716 protein FxsA
D KO561_02005 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D KO561_14105 VOC family protein K04750 phnB; PhnB protein
D KO561_20265 histidine phosphatase family protein K15640 K15640; uncharacterized phosphatase
D KO561_08225 ctaG; cytochrome c oxidase assembly factor CtaG K02862 ctaG; putative membrane protein
D KO561_02325 SprT family protein K03095 sprL; SprT-like protein
D KO561_02160 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D KO561_08230 DUF420 domain-containing protein K08976 K08976; putative membrane protein
D KO561_12255 DUF350 domain-containing protein K08989 K08989; putative membrane protein
D KO561_12520 DUF350 domain-containing protein K08989 K08989; putative membrane protein
C 99997 Function unknown
D KO561_17665 HD domain-containing protein K06885 K06885; uncharacterized protein
D KO561_04695 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D KO561_06290 prolyl oligopeptidase family serine peptidase K06889 K06889; uncharacterized protein
D KO561_09740 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D KO561_09540 CoA-binding protein K06929 K06929; uncharacterized protein
D KO561_10065 HD domain-containing protein K06950 K06950; uncharacterized protein
D KO561_08740 KH domain-containing protein K06960 K06960; uncharacterized protein
D KO561_00350 NYN domain-containing protein K06962 K06962; uncharacterized protein
D KO561_10260 zinc metallopeptidase K06973 K06973; uncharacterized protein
D KO561_17585 GNAT family N-acetyltransferase K06976 K06976; uncharacterized protein
D KO561_04510 MMPL family transporter K07003 K07003; uncharacterized protein
D KO561_05655 VOC family protein K07032 K07032; uncharacterized protein
D KO561_19485 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein K07032 K07032; uncharacterized protein
D KO561_13090 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein
D KO561_02050 zinc ribbon domain-containing protein K07069 K07069; uncharacterized protein
D KO561_03600 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D KO561_02755 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D KO561_19160 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D KO561_07255 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D KO561_05380 permease K07089 K07089; uncharacterized protein
D KO561_14370 permease K07089 K07089; uncharacterized protein
D KO561_13655 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D KO561_14445 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D KO561_18595 TSUP family transporter K07090 K07090; uncharacterized protein
D KO561_07130 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D KO561_12185 metallophosphoesterase K07095 K07095; uncharacterized protein
D KO561_08030 metallophosphoesterase K07098 K07098; uncharacterized protein
D KO561_07325 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D KO561_16630 SET domain-containing protein K07117 K07117; uncharacterized protein
D KO561_10730 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D KO561_11715 YitT family protein K07149 K07149; uncharacterized protein
D KO561_13825 YitT family protein K07149 K07149; uncharacterized protein
D KO561_19985 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D KO561_09525 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D KO561_11410 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D KO561_02225 PH domain-containing protein K09167 K09167; uncharacterized protein
D KO561_01680 YqcI/YcgG family protein K09190 K09190; uncharacterized protein
D KO561_17660 YwgA family protein K09388 K09388; uncharacterized protein
D KO561_09085 DUF503 family protein K09764 K09764; uncharacterized protein
D KO561_09780 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D KO561_20080 YaaR family protein K09770 K09770; uncharacterized protein
D KO561_13480 divergent PAP2 family protein K09775 K09775; uncharacterized protein
D KO561_06740 divergent PAP2 family protein K09775 K09775; uncharacterized protein
D KO561_13420 DUF378 domain-containing protein K09779 K09779; uncharacterized protein
D KO561_08725 putative DNA-binding protein K09787 K09787; uncharacterized protein
D KO561_04890 YbaN family protein K09790 K09790; uncharacterized protein
D KO561_01780 DUF456 family protein K09793 K09793; uncharacterized protein
D KO561_09785 S1-like domain-containing RNA-binding protein K00243 K00243; uncharacterized protein
D KO561_04020 putative glycolipid-binding domain-containing protein K09957 K09957; uncharacterized protein
D KO561_15675 DUF779 domain-containing protein K09959 K09959; uncharacterized protein
D KO561_03820 nucleotidyltransferase family protein K09962 K09962; uncharacterized protein
D KO561_09420 YneF family protein K09976 K09976; uncharacterized protein
D KO561_10110 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein
D KO561_10410 YIEGIA family protein K05739 seaA; uncharacterized protein
D KO561_05680 YIEGIA family protein K05739 seaA; uncharacterized protein
D KO561_11905 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D KO561_16235 DUF47 family protein K07220 K07220; uncharacterized protein
D KO561_03650 DUF402 domain-containing protein K07586 ygaC; uncharacterized protein
D KO561_09070 YlxR family protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 17, 2024