+D
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Transfer RNA Biogenesis - Candidatus Riesia sp. GBBU
%
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
C CCA adding factors
D AOQ88_02210 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D AOQ88_02240 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonuclease complex
C tRNA splicing ligase complex
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
C tRNA import factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D AOQ88_01855 hypothetical protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AOQ88_01205 hypothetical protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AOQ88_02070 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AOQ88_02380 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AOQ88_00190 hypothetical protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AOQ88_02145 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AOQ88_02305 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AOQ88_00745 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AOQ88_01050 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AOQ88_00340 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AOQ88_01065 hypothetical protein K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
C Other AARSs
D AOQ88_00095 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AOQ88_00645 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AOQ88_00235 hypothetical protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AOQ88_00615 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AOQ88_01020 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AOQ88_00880 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AOQ88_01165 hypothetical protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AOQ88_00255 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AOQ88_00260 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AOQ88_00360 hypothetical protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AOQ88_02015 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AOQ88_02435 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
C AARS associated factors
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferase
C Methyltransferases
C Psudouridine synthases
D AOQ88_01910 hypothetical protein K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
C Thiolation factors
C KEOPS/EKC complex
C Elongator complex
C Elongator related proteins
C Other tRNA modification factors
D AOQ88_01540 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AOQ88_00825 hypothetical protein K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AOQ88_00480 hypothetical protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D AOQ88_00300 hypothetical protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
B tRNA degradation factors
C TRAMP complex
C Rapid tRNA decay (RTD) pathway factors
C Other tRNA degradation factors
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
D AOQ88_00465 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
C CCA adding factors
D AOQ88_02210 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D AOQ88_02240 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D AOQ88_00190 hypothetical protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AOQ88_01205 hypothetical protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D AOQ88_00360 hypothetical protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AOQ88_02015 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AOQ88_02435 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AOQ88_00235 hypothetical protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AOQ88_02070 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AOQ88_02380 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AOQ88_00340 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AOQ88_00095 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AOQ88_00880 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AOQ88_02145 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AOQ88_02305 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AOQ88_00615 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AOQ88_01065 hypothetical protein K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AOQ88_02165 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AOQ88_02285 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AOQ88_02170 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AOQ88_02280 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AOQ88_01020 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AOQ88_01855 hypothetical protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AOQ88_00745 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AOQ88_01050 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AOQ88_00255 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AOQ88_00260 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AOQ88_01165 hypothetical protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AOQ88_00645 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
C Trans-editing factors
B tRNA modification factors
C Deaminases
D AOQ88_01135 hypothetical protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
C Dihydorouridine synthases
C Methylthiotransferases
D AOQ88_00170 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
C Methyltransferases
D AOQ88_01060 hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D AOQ88_01055 hypothetical protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D AOQ88_00060 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D AOQ88_00480 hypothetical protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
C Psudouridine synthases
D AOQ88_01910 hypothetical protein K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
C Thiolation factors
D AOQ88_00565 mnmA; tRNA 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AOQ88_02035 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AOQ88_02415 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AOQ88_01715 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D AOQ88_01720 hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D AOQ88_01725 hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D AOQ88_01795 sulfur relay protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
C KEOPS/EKC complex
C Other tRNA modification factors
D AOQ88_00300 hypothetical protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AOQ88_00825 hypothetical protein K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AOQ88_01210 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D AOQ88_00870 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D AOQ88_01540 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
B tRNA degradation factors
C AOQ88_00885 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024