+D GENES KO
#
KEGG Orthology (KO) - Rhodothermus marinus DSM 4252
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rmr00010]
D Rmar_1690 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Rmar_0033 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rmar_1238 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Rmar_2333 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Rmar_0296 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rmar_1216 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Rmar_2101 Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rmar_1476 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rmar_1799 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rmar_1837 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rmar_1688 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rmar_0833 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rmar_0942 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Rmar_1398 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rmar_1397 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rmar_1396 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rmar_2411 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rmar_1972 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmar_2584 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rmar_2585 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rmar_2583 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Rmar_0337 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Rmar_0336 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Rmar_0132 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Rmar_0121 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rmar_1499 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rmar_1427 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rmar_0474 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Rmar_1197 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:rmr00020]
D Rmar_2224 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Rmar_2084 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Rmar_2190 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Rmar_1401 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Rmar_2370 2-oxoglutarate dehydrogenase, E1 subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D Rmar_1972 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmar_0337 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Rmar_0336 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Rmar_2498 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rmar_1694 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rmar_0210 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Rmar_0211 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Rmar_0208 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Rmar_0209 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Rmar_0748 fumarate lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Rmar_0912 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rmar_1197 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Rmar_1398 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rmar_1397 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rmar_1396 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rmar_2411 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rmar_2584 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rmar_2585 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rmar_2583 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:rmr00030]
D Rmar_0033 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rmar_1238 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Rmar_2298 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Rmar_2299 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D Rmar_2300 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Rmar_2051 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Rmar_0472 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Rmar_0473 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Rmar_0458 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Rmar_1057 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Rmar_2416 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Rmar_1159 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Rmar_2276 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Rmar_0555 carbohydrate kinase, thermoresistant glucokinase family K00851 idnK; gluconokinase [EC:2.7.1.12]
D Rmar_1160 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Rmar_2275 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Rmar_0944 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rmar_2101 Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rmar_1216 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Rmar_2333 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Rmar_0296 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rmr00040]
D Rmar_2469 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Rmar_2731 Cupin 2 conserved barrel domain protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D Rmar_1168 Cupin 2 conserved barrel domain protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D Rmar_2302 5-keto 4-deoxyuronate isomerase-like protein K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D Rmar_2389 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D Rmar_2303 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D Rmar_2277 Mandelate racemase/muconate lactonizing protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D Rmar_1528 hypothetical protein K21619 uxaE; tagaturonate epimerase [EC:5.1.2.7]
D Rmar_1185 Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D Rmar_1859 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rmar_1743 Xylose isomerase domain protein TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D Rmar_0470 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Rmar_2051 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Rmar_0469 L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D Rmar_0437 carbohydrate kinase FGGY K00854 xylB; xylulokinase [EC:2.7.1.17]
D Rmar_0438 Xylose isomerase domain protein TIM barrel K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Rmar_0692 Xylose isomerase domain protein TIM barrel K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D Rmar_0693 carbohydrate kinase FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D Rmar_0495 Aldehyde Dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D Rmar_1303 Aldehyde Dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
C 00051 Fructose and mannose metabolism [PATH:rmr00051]
D Rmar_0467 Mannan endo-1,4-beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Rmar_0016 Mannan endo-1,4-beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Rmar_0111 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Rmar_1238 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Rmar_1785 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Rmar_0883 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Rmar_0692 Xylose isomerase domain protein TIM barrel K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D Rmar_0693 carbohydrate kinase FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D Rmar_0502 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
D Rmar_0501 mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D Rmar_1220 conserved hypothetical protein K18818 mgs; mannosylglycerate synthase [EC:2.4.1.269]
D Rmar_2333 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Rmar_0296 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rmar_1216 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Rmar_0438 Xylose isomerase domain protein TIM barrel K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Rmar_1165 poly(beta-D-mannuronate) lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D Rmar_1386 hypothetical protein K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D Rmar_2101 Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rmar_1476 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rmar_0683 Levanase K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
C 00052 Galactose metabolism [PATH:rmr00052]
D Rmar_0474 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Rmar_0490 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Rmar_2550 Galactokinase-like protein K00849 galK; galactokinase [EC:2.7.1.6]
D Rmar_0492 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Rmar_1316 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rmar_1133 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rmar_1690 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Rmar_1941 glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Rmar_1479 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D Rmar_2597 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Rmar_2333 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Rmar_0296 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rmar_0367 putative alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Rmar_1683 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Rmar_0476 alpha-glucosidase, putative, adg97A K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:rmr00053]
D Rmar_1859 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rmar_1185 Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D Rmar_1743 Xylose isomerase domain protein TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D Rmar_0470 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:rmr00500]
D Rmar_0367 putative alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Rmar_1683 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Rmar_0476 alpha-glucosidase, putative, adg97A K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Rmar_1080 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_1081 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_2069 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_0536 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_2616 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_0025 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Rmar_0076 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Rmar_1981 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Rmar_1982 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Rmar_1684 Starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D Rmar_1886 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Rmar_1810 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Rmar_0286 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D Rmar_1002 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Rmar_1885 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D Rmar_0981 trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D Rmar_0980 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D Rmar_0119 Alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D Rmar_1690 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Rmar_0033 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rmar_1238 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Rmar_0111 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rmr00520]
D Rmar_1345 glycoside hydrolase family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D Rmar_0925 beta-lactamase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Rmar_2797 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Rmar_2791 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D Rmar_2077 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D Rmar_1219 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D Rmar_0111 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Rmar_0598 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rmar_2753 glucokinase regulatory-like protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D Rmar_2058 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Rmar_1214 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rmar_2509 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rmar_1675 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D Rmar_1674 oxidoreductase domain protein K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Rmar_0724 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D Rmar_1673 transferase hexapeptide repeat containing protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D Rmar_0573 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D Rmar_0475 Alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D Rmar_1068 glycoside hydrolase family 43 K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D Rmar_1690 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Rmar_1859 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rmar_0490 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Rmar_2550 Galactokinase-like protein K00849 galK; galactokinase [EC:2.7.1.6]
D Rmar_0492 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Rmar_1316 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rmar_1133 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rmar_0033 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rmar_1238 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D Rmar_1785 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Rmar_0883 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Rmar_1136 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D Rmar_1981 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:rmr00620]
D Rmar_1499 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rmar_1427 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rmar_2584 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rmar_2585 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rmar_2583 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Rmar_0337 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Rmar_0336 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Rmar_1398 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rmar_1397 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rmar_1396 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rmar_2411 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rmar_1972 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmar_0121 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rmar_0833 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rmar_0219 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rmar_0674 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rmar_0675 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rmar_2257 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rmar_1812 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rmar_0132 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Rmar_1466 Lactate 2-monooxygenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4]
D Rmar_0267 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Rmar_0243 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Rmar_0912 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rmar_0748 fumarate lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Rmar_1661 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Rmar_1197 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Rmar_0942 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Rmar_2163 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D Rmar_1470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_1531 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_0740 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rmar_0743 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rmr00630]
D Rmar_2249 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D Rmar_1499 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rmar_1427 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rmar_2163 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D Rmar_0912 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rmar_2224 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Rmar_2084 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Rmar_1470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_1531 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_2748 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Rmar_2779 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Rmar_0731 Glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D Rmar_1353 Haloacid dehalogenase domain protein hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Rmar_1443 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmar_2149 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmar_0127 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rmar_2659 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Rmar_1804 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rmar_1972 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmar_0676 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Rmar_0423 Xylose isomerase domain protein TIM barrel K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D Rmar_0944 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rmar_1159 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Rmar_2276 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Rmar_2370 2-oxoglutarate dehydrogenase, E1 subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00640 Propanoate metabolism [PATH:rmr00640]
D Rmar_1499 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rmar_1427 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rmar_1486 dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D Rmar_0991 dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D Rmar_1549 Transketolase domain protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D Rmar_1972 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmar_2584 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rmar_2585 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rmar_2583 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Rmar_1419 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D Rmar_1469 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rmar_0219 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rmar_0674 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rmar_0675 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rmar_2257 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rmar_1694 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rmar_2498 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rmar_0100 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D Rmar_0042 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D Rmar_0101 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D Rmar_0132 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Rmar_2651 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:rmr00650]
D Rmar_1470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_1531 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_0752 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rmar_1552 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rmar_1707 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Rmar_1469 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rmar_0094 Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Rmar_1550 Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Rmar_2748 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Rmar_0210 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Rmar_0211 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Rmar_0208 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Rmar_0209 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Rmar_2008 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rmar_2584 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rmar_2585 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rmar_2583 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Rmar_0337 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Rmar_0336 thiamine pyrophosphate protein domain protein TPP-binding protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Rmar_2658 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Rmar_1444 thiamine pyrophosphate protein central region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rmar_0736 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rmar_0737 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rmr00660]
D Rmar_1444 thiamine pyrophosphate protein central region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rmar_0736 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rmar_0737 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Rmar_1694 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rmar_2498 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rmar_1391 conserved hypothetical protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D Rmar_0741 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Rmar_0742 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Rmar_0739 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rmr00562]
D Rmar_0385 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rmar_1195 Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Rmar_1196 Nucleotidyl transferase K07281 ipct; 1L-myo-inositol 1-phosphate cytidylyltransferase [EC:2.7.7.74]
D Rmar_1476 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rmr00190]
D Rmar_2152 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Rmar_2153 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Rmar_2154 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Rmar_2155 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Rmar_2156 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Rmar_2160 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Rmar_2162 NADH dehydrogenase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Rmar_2050 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Rmar_2631 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Rmar_1245 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Rmar_1246 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Rmar_1247 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Rmar_1248 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Rmar_1251 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Rmar_2662 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Rmar_0210 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Rmar_0211 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Rmar_0208 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Rmar_0209 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Rmar_1787 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Rmar_0232 caa(3)-type oxidase, subunit IV K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D Rmar_0231 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Rmar_1564 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Rmar_0161 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Rmar_0230 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Rmar_1565 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Rmar_0162 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Rmar_0229 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Rmar_1786 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Rmar_0315 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Rmar_0073 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Rmar_0316 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Rmar_0314 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Rmar_0072 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Rmar_0311 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rmar_0313 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rmar_0312 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Rmar_2352 hypothetical protein K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Rmar_1011 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rmr00680]
D Rmar_0127 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rmar_0944 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rmar_1688 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rmar_1661 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Rmar_0912 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rmar_2101 Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rmar_1216 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Rmar_2333 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Rmar_0296 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rmar_1499 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rmar_1427 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rmar_2584 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rmar_2585 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rmar_2583 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Rmar_1837 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rmar_1474 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rmar_2174 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rmar_2173 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Rmar_0022 Phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19]
D Rmar_1805 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:rmr00910]
D Rmar_2773 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Rmar_2777 molybdopterin oxidoreductase K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2]
D Rmar_0413 molybdopterin oxidoreductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D Rmar_2774 precorrin-3B synthase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D Rmar_0414 hypothetical protein K15876 nrfH; cytochrome c nitrite reductase small subunit
D Rmar_1208 nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D Rmar_0652 Nitrite reductase (NO-forming) K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
D Rmar_2012 Nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D Rmar_2129 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Rmar_1443 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmar_2149 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmar_1260 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Rmar_1261 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:rmr00920]
D Rmar_1856 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Rmar_2420 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Rmar_1711 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Rmar_2356 adenylylsulfate reductase, thioredoxin dependent K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Rmar_2355 Ferredoxin--nitrite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D Rmar_2576 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Rmar_2575 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Rmar_0983 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rmar_1671 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rmar_0188 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rmar_0930 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Rmar_1667 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Rmar_0184 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rmr00061]
D Rmar_0219 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rmar_0674 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rmar_0675 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rmar_2257 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rmar_2689 acyl carrier protein K02078 acpP; acyl carrier protein
D Rmar_2802 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rmar_0105 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rmar_2449 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rmar_2803 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rmar_2690 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rmar_2548 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rmar_1167 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2450 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_0816 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2801 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2612 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_1603 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2136 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_0386 enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rmar_1708 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rmar_0626 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rmr00071]
D Rmar_1470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_1531 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_1706 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rmar_1469 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rmar_1707 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Rmar_2207 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rmar_1705 Protein of unknown function DUF1974 K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D Rmar_1436 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rmar_1708 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rmar_0626 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rmar_0121 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rmr00561]
D Rmar_0944 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rmar_2804 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Rmar_1269 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rmar_0569 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Rmar_1184 esterase/lipase/thioesterase family protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D Rmar_2597 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:rmr00564]
D Rmar_1270 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Rmar_0526 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Rmar_1269 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rmar_0569 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Rmar_2191 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Rmar_0961 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Rmar_1995 CDP-diacylglycerol/serineO-phosphatidyltransfera se K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Rmar_1996 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Rmar_2373 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D Rmar_2182 CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:rmr00600]
D Rmar_1941 glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Rmar_2597 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Rmar_2797 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:rmr00592]
D Rmar_1706 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rmr01040]
D Rmar_0540 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Rmar_2137 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rmr00230]
D Rmar_1927 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Rmar_0039 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Rmar_2416 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Rmar_2109 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Rmar_1540 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Rmar_1872 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Rmar_0179 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Rmar_1994 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Rmar_2306 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rmar_1268 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Rmar_1036 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Rmar_1035 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Rmar_1334 Phosphoribosylaminoimidazolesuccinocarboxamidesy nthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Rmar_2151 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Rmar_1873 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rmar_0813 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Rmar_1955 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rmar_0664 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Rmar_2166 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Rmar_0152 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Rmar_0965 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Rmar_1320 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Rmar_2216 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rmar_2368 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Rmar_1509 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rmar_0677 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rmar_2297 CMP/dCMP deaminase zinc-binding protein K01487 guaD; guanine deaminase [EC:3.5.4.3]
D Rmar_0012 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Rmar_0342 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rmar_0431 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rmar_2540 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rmar_0430 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Rmar_0080 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Rmar_0871 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Rmar_1244 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Rmar_2326 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Rmar_1452 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Rmar_2346 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D Rmar_2501 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D Rmar_1234 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Rmar_1932 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D Rmar_1856 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:rmr00240]
D Rmar_2001 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Rmar_2002 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Rmar_0723 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Rmar_0997 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Rmar_0627 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D Rmar_0126 phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Rmar_2181 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Rmar_1975 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Rmar_0009 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Rmar_2216 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rmar_1508 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Rmar_2712 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Rmar_1291 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Rmar_0382 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D Rmar_1955 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rmar_0446 HAD-superfamily hydrolase, subfamily IA, variant 1 K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D Rmar_1648 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Rmar_0177 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Rmar_0553 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Rmar_0999 Indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D Rmar_1339 CMP/dCMP deaminase zinc-binding protein K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Rmar_0342 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rmar_0431 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rmar_2540 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rmar_0430 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Rmar_2346 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D Rmar_0158 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Rmar_2348 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Rmar_2606 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D Rmar_0340 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Rmar_2582 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D Rmar_2091 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Rmar_2385 isochorismatase hydrolase K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110]
D Rmar_0154 short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rmr00250]
D Rmar_0257 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmar_1306 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Rmar_2418 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Rmar_0656 putative asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Rmar_1612 Asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Rmar_0967 Asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rmar_2070 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rmar_2386 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rmar_0465 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Rmar_0950 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rmar_1625 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rmar_1452 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Rmar_2151 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Rmar_0723 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Rmar_2008 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rmar_1260 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Rmar_1261 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Rmar_2129 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Rmar_1231 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Rmar_1443 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmar_2149 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmar_2001 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Rmar_2002 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Rmar_2306 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rmar_0598 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rmar_2109 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rmr00260]
D Rmar_0931 Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rmar_2222 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Rmar_1656 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D Rmar_0932 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rmar_1262 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Rmar_0058 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Rmar_1263 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Rmar_1115 aromatic amino acid beta-eliminating lyase/threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Rmar_0127 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rmar_0944 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rmar_1837 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rmar_1474 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rmar_2174 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rmar_2173 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Rmar_0154 short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D Rmar_0699 pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Rmar_0698 Alcohol dehydrogenase GroES domain protein K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D Rmar_2659 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Rmar_1804 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rmar_1972 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmar_0676 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Rmar_1995 CDP-diacylglycerol/serineO-phosphatidyltransfera se K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Rmar_1050 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Rmar_1049 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rmar_1294 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rmr00270]
D Rmar_2433 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Rmar_0427 5-methyltetrahydropteroyltriglutamate/homocystei neS-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Rmar_2688 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Rmar_2354 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Rmar_2353 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Rmar_2169 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Rmar_0152 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Rmar_1491 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Rmar_1894 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K25035 rlp; S-methyl-5-thioribulose 1-phosphate isomerase [EC:5.3.3.23]
D Rmar_1883 Cupin 2 conserved barrel domain protein K01767 cupin; S-methyl-1-thioxylulose 5-phosphate methylthiotransferase [EC:2.8.4.6]
D Rmar_1177 Cystathionine gamma-synthase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Rmar_0371 putative GAF sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D Rmar_2686 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rmar_0931 Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rmar_2222 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Rmar_1656 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D Rmar_0932 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rmar_0930 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Rmar_1667 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Rmar_0184 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Rmar_2339 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Rmar_0929 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Rmar_2679 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rmar_0257 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmar_0983 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rmar_1671 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rmar_0188 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rmar_0132 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Rmar_0912 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rmar_1677 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D Rmar_1474 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rmar_2174 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rmar_2173 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rmr00280]
D Rmar_2679 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rmar_1486 dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D Rmar_0991 dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D Rmar_1549 Transketolase domain protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D Rmar_1972 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmar_2207 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rmar_1469 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rmar_1706 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rmar_2658 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Rmar_1470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_1531 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rmr00290]
D Rmar_0741 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Rmar_0742 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Rmar_0739 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Rmar_1444 thiamine pyrophosphate protein central region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rmar_0736 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rmar_0737 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Rmar_0738 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Rmar_0324 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rmar_2679 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rmar_0740 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rmar_0743 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rmr00300]
D Rmar_0931 Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rmar_2222 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Rmar_1656 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D Rmar_0932 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rmar_1658 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rmar_1657 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Rmar_1660 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Rmar_0947 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rmar_0755 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Rmar_0948 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D Rmar_2705 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rmar_2483 Mur ligase middle domain protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rmr00310]
D Rmar_1972 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmar_1436 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rmar_1469 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rmar_1470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_1531 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_2008 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rmar_2522 2-hydroxyglutarate dehydrogenase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D Rmar_0136 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rmr00220]
D Rmar_0946 aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain protein K09065 argF; N-acetylornithine carbamoyltransferase [EC:2.1.3.9]
D Rmar_0950 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rmar_1625 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rmar_1802 amidinotransferase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D Rmar_2490 Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D Rmar_2306 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rmar_1443 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmar_2149 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmar_2129 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Rmar_0257 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmar_2578 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Rmar_0945 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Rmar_0947 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rmar_1622 peptidase M20 K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D Rmar_0377 peptidase M20 K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D Rmar_0948 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
C 00330 Arginine and proline metabolism [PATH:rmr00330]
D Rmar_1063 5-oxoprolinase (ATP-hydrolyzing) K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D Rmar_1062 5-oxoprolinase (ATP-hydrolyzing) K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D Rmar_1413 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Rmar_1511 Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D Rmar_1510 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D Rmar_2353 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Rmar_2169 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Rmar_2354 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rmar_2205 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rmar_1418 FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D Rmar_1802 amidinotransferase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D Rmar_1570 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Rmar_0183 Proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D Rmar_1231 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Rmar_0257 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:rmr00340]
D Rmar_1052 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Rmar_0811 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D Rmar_1572 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Rmar_1571 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Rmar_1573 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Rmar_1569 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Rmar_0667 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rmar_0666 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Rmar_1594 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Rmar_1593 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D Rmar_1595 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D Rmar_1596 Arginase/agmatinase/formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:rmr00350]
D Rmar_0257 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmar_0667 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rmar_0121 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rmar_2008 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rmar_1948 Tryptophanase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
C 00360 Phenylalanine metabolism [PATH:rmr00360]
D Rmar_1553 thioesterase superfamily protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D Rmar_1543 phenylacetate-CoA oxygenase, PaaG subunit K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D Rmar_1544 phenylacetate-CoA oxygenase, PaaH subunit K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D Rmar_1545 phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D Rmar_1546 phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D Rmar_1551 phenylacetate degradation, enoyl-CoA hydratase paaB K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D Rmar_2204 Enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D Rmar_1556 phenylacetic acid degradation protein paaN K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D Rmar_0752 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rmar_1552 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rmar_0257 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmar_0667 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rmar_0499 FAD dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D Rmar_2205 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rmar_0379 alpha/beta hydrolase fold protein K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
C 00380 Tryptophan metabolism [PATH:rmr00380]
D Rmar_1972 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmar_1436 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rmar_1469 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rmar_1470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_1531 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rmar_2205 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rmar_2779 Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rmr00400]
D Rmar_0597 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Rmar_1202 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Rmar_0204 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Rmar_0148 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Rmar_2486 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Rmar_2502 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Rmar_1849 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Rmar_1042 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Rmar_1045 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Rmar_1046 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Rmar_2358 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Rmar_1048 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Rmar_1047 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Rmar_1050 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Rmar_1049 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rmar_1294 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rmar_1803 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Rmar_0633 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Rmar_0257 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmar_0667 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rmr00410]
D Rmar_0750 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rmar_0749 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Rmar_2582 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D Rmar_2091 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Rmar_1469 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:rmr00430]
D Rmar_2546 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rmar_2108 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rmar_0465 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
D Rmar_0205 beta-lactamase domain protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:rmr00450]
D Rmar_1667 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Rmar_0184 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Rmar_2433 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Rmar_0427 5-methyltetrahydropteroyltriglutamate/homocystei neS-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Rmar_1177 Cystathionine gamma-synthase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Rmar_2025 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Rmar_2656 Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Rmar_0181 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Rmar_1856 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Rmar_1568 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rmr00460]
D Rmar_1080 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_1081 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_2069 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_0536 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_2616 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_2546 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rmar_2108 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rmar_0656 putative asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Rmar_1612 Asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Rmar_0127 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rmr00470]
D Rmar_0994 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rmar_0135 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rmar_0998 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rmar_2306 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rmar_2703 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rmar_2418 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Rmar_0755 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Rmar_1656 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D Rmar_0498 proline racemase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D Rmar_0494 dihydrodipicolinate synthetase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D Rmar_0499 FAD dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:rmr00480]
D Rmar_2546 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rmar_2108 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rmar_1710 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rmar_2190 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Rmar_1401 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Rmar_2300 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Rmar_2298 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Rmar_2353 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Rmar_2169 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:rmr00511]
D Rmar_1941 glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Rmar_2797 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Rmar_0084 conserved hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D Rmar_1344 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
C 00540 Lipopolysaccharide biosynthesis
D Rmar_0275 metallophosphoesterase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rmr00541]
D Rmar_1316 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rmar_1133 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rmar_1859 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rmar_0729 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rmar_1351 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rmar_1350 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rmar_1858 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rmar_1352 dTDP-4-dehydrorhamnose 3 5-epimerase and related enzymes-like protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Rmar_1967 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Rmar_1136 NAD-dependent epimerase/dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D Rmar_1785 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Rmar_0883 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Rmar_1675 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D Rmar_1674 oxidoreductase domain protein K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Rmar_0724 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D Rmar_1673 transferase hexapeptide repeat containing protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D Rmar_0573 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:rmr00550]
D Rmar_1214 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rmar_2509 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rmar_2700 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Rmar_2703 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rmar_2705 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rmar_0135 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rmar_0998 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rmar_2483 Mur ligase middle domain protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Rmar_1960 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Rmar_2634 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rmar_2704 phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rmar_2701 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Rmar_1116 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Rmar_0274 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rmar_0630 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Rmar_2706 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rmar_1876 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Rmar_2219 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:rmr00552]
D Rmar_2634 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rmar_0895 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rmr00730]
D Rmar_0078 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Rmar_2095 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Rmar_0716 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rmar_1215 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rmar_0596 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Rmar_2099 glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D Rmar_2097 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Rmar_2096 Thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Rmar_1712 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Rmar_2057 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Rmar_1702 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Rmar_1241 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rmar_0524 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rmar_1234 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Rmar_0151 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D Rmar_2462 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:rmr00740]
D Rmar_2056 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Rmar_2065 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Rmar_1930 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Rmar_2063 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Rmar_1312 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Rmar_1927 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Rmar_0039 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rmr00750]
D Rmar_0186 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Rmar_0250 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D Rmar_2173 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Rmar_0252 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Rmar_0058 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Rmar_1263 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rmr00760]
D Rmar_1306 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Rmar_1795 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Rmar_0217 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Rmar_0195 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Rmar_0664 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Rmar_2166 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Rmar_1955 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rmar_0680 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Rmar_2312 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Rmar_0822 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D Rmar_2323 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Rmar_1525 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Rmar_2171 oxidoreductase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Rmar_2172 NAD(P)(+) transhydrogenase (AB-specific) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Rmar_2170 NAD(P)(+) transhydrogenase (AB-specific) K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D Rmar_2008 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rmr00770]
D Rmar_1444 thiamine pyrophosphate protein central region K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rmar_0736 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rmar_0737 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Rmar_0738 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Rmar_0324 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rmar_1956 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Rmar_0749 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Rmar_0383 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Rmar_0013 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Rmar_0256 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Rmar_0189 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Rmar_0921 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Rmar_2679 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rmar_2582 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D Rmar_2091 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Rmar_0750 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rmr00780]
D Rmar_2690 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rmar_2548 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rmar_1167 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2450 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_0816 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2801 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2612 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_1603 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2136 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_0386 enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rmar_0106 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Rmar_0448 aminotransferase class I and II K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Rmar_0104 adenosylmethionine-8-amino-7-oxononanoateaminotr ansferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Rmar_0103 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Rmar_0107 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Rmar_0108 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rmr00785]
D Rmar_2259 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Rmar_2195 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Rmar_1972 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmar_1398 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rmar_1397 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rmar_1396 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rmar_2411 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rmar_2370 2-oxoglutarate dehydrogenase, E1 subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D Rmar_1486 dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D Rmar_0991 dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D Rmar_1549 Transketolase domain protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D Rmar_2659 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Rmar_1804 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rmar_0676 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rmr00790]
D Rmar_0193 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Rmar_1241 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rmar_0524 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rmar_1400 phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D Rmar_0412 NUDIX hydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D Rmar_1513 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Rmar_2006 2-amino-4-hydroxy-6-hydroxymethyl dihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Rmar_0145 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Rmar_0341 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Rmar_2308 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Rmar_2056 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Rmar_2114 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D Rmar_0192 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Rmar_0320 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Rmar_1250 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Rmar_0318 queuosine biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Rmar_0319 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Rmar_0321 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Rmar_2214 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rmar_2365 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Rmar_1336 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Rmar_0808 molybdenum cofactor synthesis domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Rmar_0034 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Rmar_2771 4-diphosphocytidyl-2C-methyl-D-erythritolsynthas e K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D Rmar_2474 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rmr00670]
D Rmar_0341 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Rmar_0952 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Rmar_0127 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rmar_1872 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Rmar_1873 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rmar_2549 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Rmar_1804 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rmar_2433 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Rmar_0340 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Rmar_0234 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Rmar_1025 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rmr00860]
D Rmar_1289 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rmar_1892 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Rmar_1199 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Rmar_0806 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Rmar_1891 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Rmar_1890 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Rmar_1187 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Rmar_1193 Coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D Rmar_1362 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Rmar_1666 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D Rmar_1198 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Rmar_1668 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Rmar_1669 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Rmar_1787 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Rmar_1786 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Rmar_1592 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Rmar_2682 magnesium protoporphyrin chelatase, putative K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D Rmar_1185 Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D Rmar_2621 Ferritin Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
D Rmar_1383 multicopper oxidase type 3 K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rmr00130]
D Rmar_2332 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Rmar_0581 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D Rmar_0582 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D Rmar_0587 Mandelate racemase/muconate lactonizing protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D Rmar_0588 O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D Rmar_0922 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D Rmar_1468 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D Rmar_0586 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Rmar_1032 periplasmic solute-binding protein-like protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D Rmar_0396 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Rmar_2380 NmrA family protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rmr00900]
D Rmar_1962 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Rmar_1098 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Rmar_2623 4-diphosphocytidyl-2C-methyl-D-erythritolkinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Rmar_1099 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Rmar_0278 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Rmar_0711 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Rmar_1470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_1531 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_1235 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Rmar_1909 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Rmar_1960 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rmr00906]
D Rmar_1601 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Rmar_1598 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D Rmar_1608 lycopene cyclase domain protein K22502 crtY; lycopene beta-cyclase [EC:5.5.1.19]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:rmr00907]
D Rmar_1469 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rmar_2203 short-chain dehydrogenase/reductase SDR K13775 atuG; citronellol/citronellal dehydrogenase
D Rmar_2658 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Rmar_1706 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Rmar_0472 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
D Rmar_1747 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
D Rmar_1753 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
D Rmar_1759 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
D Rmar_1760 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
D Rmar_1438 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products [PATH:rmr01057]
D Rmar_0583 beta-lactamase domain protein K05555 actIV; cyclase [EC:4.-.-.-]
D Rmar_2072 FAD dependent oxidoreductase K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
C 00253 Tetracycline biosynthesis
D Rmar_2072 FAD dependent oxidoreductase K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
C 00523 Polyketide sugar unit biosynthesis [PATH:rmr00523]
D Rmar_0729 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rmar_1351 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rmar_1350 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rmar_1858 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rmar_1352 dTDP-4-dehydrorhamnose 3 5-epimerase and related enzymes-like protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Rmar_1967 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:rmr01054]
D Rmar_2418 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D Rmar_0581 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D Rmar_1350 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rmar_1858 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rmr00946]
D Rmar_1080 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_1081 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_2069 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_0536 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_2616 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_0689 alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:rmr00311]
D Rmar_1724 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D Rmar_2815 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:rmr00261]
D Rmar_1856 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Rmar_0931 Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rmar_2222 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Rmar_1656 aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D Rmar_0932 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rmar_1658 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rmar_1657 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rmr00521]
D Rmar_1690 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Rmar_1195 Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Rmar_0385 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rmar_0729 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rmar_1351 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rmar_1350 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rmar_1858 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rmar_1352 dTDP-4-dehydrorhamnose 3 5-epimerase and related enzymes-like protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Rmar_1967 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Rmar_1690 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rmr00525]
D Rmar_0729 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rmar_1351 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rmar_1350 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rmar_1858 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rmr00401]
D Rmar_1803 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Rmar_0257 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmar_0667 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
D Rmar_2072 FAD dependent oxidoreductase K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
C 00405 Phenazine biosynthesis
D Rmar_1042 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Rmar_1045 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Rmar_2802 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rmar_1167 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2450 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_0816 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2801 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2612 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_1603 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2136 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_0386 enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Rmar_2689 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rmr00999]
D Rmar_2688 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Rmar_0148 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Rmar_1080 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_1081 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_2069 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_0536 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rmar_2616 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rmr00362]
D Rmar_1706 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rmar_1554 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D Rmar_2383 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Rmar_1391 conserved hypothetical protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D Rmar_1469 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rmar_1707 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Rmar_1436 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rmar_0752 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rmar_1552 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rmar_1470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_1531 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rmr00627]
D Rmar_2205 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rmar_1812 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation [PATH:rmr00364]
D Rmar_2600 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rmr00625]
D Rmar_0121 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rmar_0821 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rmr00361]
D Rmar_2600 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Rmar_2383 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation [PATH:rmr00623]
D Rmar_2600 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:rmr00622]
D Rmar_2383 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
D Rmar_2584 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Rmar_2585 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Rmar_2583 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
D Rmar_1706 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rmr00643]
D Rmar_2205 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rmar_2383 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:rmr00930]
D Rmar_1469 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:rmr00626]
D Rmar_0121 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rmr03020]
D Rmar_1108 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rmar_1109 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rmar_0869 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rmr03010]
D Rmar_1292 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Rmar_0007 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Rmar_0848 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Rmar_0868 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Rmar_0859 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Rmar_0600 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Rmar_0838 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Rmar_0856 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Rmar_0006 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Rmar_0841 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Rmar_0867 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Rmar_0837 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Rmar_0866 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Rmar_0855 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Rmar_1313 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Rmar_1028 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Rmar_0851 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Rmar_0601 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Rmar_0846 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Rmar_0306 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Rmar_2369 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Rmar_1105 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Rmar_0845 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Rmar_0842 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Rmar_0843 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Rmar_0854 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Rmar_0857 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Rmar_1107 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Rmar_0602 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Rmar_1106 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Rmar_1104 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Rmar_0005 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Rmar_0852 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Rmar_0861 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Rmar_0849 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Rmar_0870 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Rmar_0858 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Rmar_1031 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Rmar_0620 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Rmar_1113 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Rmar_0847 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Rmar_0844 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Rmar_0853 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Rmar_2415 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Rmar_1112 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Rmar_0021 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Rmar_0850 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Rmar_0860 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Rmar_0077 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Rmar_2805 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Rmar_0020 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Rmar_2763 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Rmar_0621 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Rmar_0865 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Rmar_R0006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rmar_R0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rmar_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rmr00970]
D Rmar_R0040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rmar_R0008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rmar_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rmar_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmar_R0041 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmar_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmar_R0034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmar_R0048 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Rmar_R0021 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Rmar_R0002 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Rmar_R0046 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rmar_R0039 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rmar_R0035 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rmar_R0018 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rmar_R0050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rmar_R0024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rmar_R0019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rmar_R0036 tRNA-His K14226 tRNA-His; tRNA His
D Rmar_R0007 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rmar_R0017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmar_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmar_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmar_R0012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmar_R0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmar_R0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rmar_R0013 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rmar_R0045 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rmar_R0043 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rmar_R0042 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rmar_R0032 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Rmar_R0016 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rmar_R0029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rmar_R0004 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rmar_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmar_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmar_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmar_R0011 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmar_R0025 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rmar_R0031 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rmar_R0022 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rmar_R0026 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Rmar_R0023 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Rmar_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rmar_R0049 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rmar_R0015 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rmar_1289 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rmar_2499 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rmar_1478 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Rmar_0570 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Rmar_1560 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rmar_2350 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rmar_1459 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Rmar_2477 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Rmar_0623 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rmar_1968 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rmar_0807 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rmar_1568 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rmar_2549 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Rmar_0722 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rmar_0671 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rmar_2048 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rmar_0302 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Rmar_0632 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rmar_2271 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rmar_1619 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rmar_0619 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rmar_0618 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rmar_1034 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rmar_1044 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rmr03060]
D Rmar_0862 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Rmar_1102 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Rmar_1928 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Rmar_1454 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Rmar_1455 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Rmar_2055 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Rmar_2761 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rmar_0369 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rmar_1027 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rmar_R0038 ffs; SRP RNA; RNA component of signal recognitionparti cle K01983 ffs; SRP RNA
D Rmar_2372 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rmar_2500 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Rmar_0125 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Rmar_2043 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rmar_2042 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rmar_2046 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rmr04122]
D Rmar_0716 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rmar_1215 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rmar_0983 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rmar_1671 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rmar_0188 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rmar_0817 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Rmar_1337 thiamineS protein K21232 MOCS2A; molybdopterin synthase sulfur carrier subunit
D Rmar_1336 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Rmar_2214 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rmar_1679 thiamineS protein K03636 moaD; sulfur-carrier protein
D Rmar_1680 UBA/THIF-type NAD/FAD binding protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D Rmar_2365 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Rmar_0808 molybdenum cofactor synthesis domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Rmar_0596 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Rmar_2098 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:rmr03018]
D Rmar_1688 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rmar_1314 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Rmar_1200 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rmar_2800 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Rmar_2856 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Rmar_1056 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Rmar_2309 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Rmar_2480 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Rmar_0615 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Rmar_2899 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Rmar_2333 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Rmar_2183 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rmar_1918 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rmar_1011 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Rmar_2544 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rmr03030]
D Rmar_1505 putative sensor with HAMP domain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_1242 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_0479 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_1917 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rmar_2608 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rmar_2254 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rmar_2629 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rmar_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rmar_0015 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Rmar_0977 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Rmar_0746 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rmar_2847 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D Rmar_1987 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Rmar_2485 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Rmar_1349 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rmar_1222 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Rmar_1412 DNA polymerase B region K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
C 03410 Base excision repair [PATH:rmr03410]
D Rmar_1446 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Rmar_1838 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Rmar_1923 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Rmar_1529 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Rmar_0014 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rmar_2622 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rmar_1349 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rmar_2564 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rmar_1222 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rmr03420]
D Rmar_2754 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Rmar_0081 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Rmar_2732 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Rmar_0047 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Rmar_1254 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Rmar_0398 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rmar_0453 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rmar_1349 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rmar_1222 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rmr03430]
D Rmar_1542 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Rmar_0730 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D Rmar_0963 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Rmar_0398 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rmar_0453 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rmar_1356 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Rmar_2037 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Rmar_2564 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rmar_0746 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rmar_2847 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D Rmar_1917 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rmar_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rmar_2608 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rmar_2629 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rmar_2254 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rmar_1505 putative sensor with HAMP domain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_1242 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_0479 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_1222 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Rmar_2890 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:rmr03440]
D Rmar_2564 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rmar_0746 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rmar_2847 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D Rmar_2750 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Rmar_0406 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Rmar_2610 recombination protein RecR K06187 recR; recombination protein RecR
D Rmar_2179 recA protein K03553 recA; recombination protein RecA
D Rmar_1349 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rmar_2313 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Rmar_2652 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Rmar_2400 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Rmar_1090 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Rmar_2142 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Rmar_1917 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rmar_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rmar_2608 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rmar_2629 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rmar_2254 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rmar_1505 putative sensor with HAMP domain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_1242 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_0479 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_2052 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rmr02010]
D Rmar_0056 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Rmar_0055 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Rmar_0054 molybdate ABC transporter, ATPase subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Rmar_0365 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rmar_2693 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Rmar_2344 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rmar_0707 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rmar_2342 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rmar_0705 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rmar_2343 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rmar_0706 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rmar_1829 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rmar_1828 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Rmar_1827 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Rmar_1826 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Rmar_1278 periplasmic solute binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D Rmar_1276 ABC-3 protein K11708 troC; manganese/zinc/iron transport system permease protein
D Rmar_1275 ABC-3 protein K11709 troD; manganese/zinc/iron transport system permease protein
D Rmar_1277 ABC transporter related protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D Rmar_1338 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Rmar_0023 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Rmar_1796 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Rmar_2426 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D Rmar_2427 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D Rmar_1411 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Rmar_0241 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Rmar_1695 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Rmar_0595 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Rmar_2016 copper ABC transporter, permease protein K19341 nosY; Cu-processing system permease protein
D Rmar_2015 heme exporter protein CcmA K19340 nosF; Cu-processing system ATP-binding protein
D Rmar_0634 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Rmar_1650 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein
D Rmar_1128 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Rmar_0416 cyclic nucleotide-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Rmar_0418 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:rmr02060]
D Rmar_1237 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Rmar_1236 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
C 03070 Bacterial secretion system [PATH:rmr03070]
D Rmar_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_0903 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_1779 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_1455 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Rmar_1454 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Rmar_1102 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Rmar_1928 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Rmar_0862 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Rmar_2055 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Rmar_2761 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rmar_0369 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rmar_2372 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rmar_1027 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rmar_2500 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Rmar_0125 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rmr02020]
D Rmar_2670 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Rmar_0614 putative two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Rmar_1501 response regulator receiver protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Rmar_1173 response regulator receiver protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Rmar_2671 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Rmar_1241 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rmar_0524 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rmar_1400 phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D Rmar_1829 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rmar_1850 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rmar_2684 2-alkenal reductase K04771 degP; serine protease Do [EC:3.4.21.107]
D Rmar_0747 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rmar_2457 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Rmar_2458 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Rmar_0803 flagellin domain protein K02406 fliC; flagellin
D Rmar_0804 flagellin domain protein K02406 fliC; flagellin
D Rmar_0757 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Rmar_0771 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rmar_1786 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Rmar_0513 two component transcriptional regulator, winged helix family K07669 mprA; two-component system, OmpR family, response regulator MprA
D Rmar_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Rmar_2436 response regulator receiver protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Rmar_2314 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D Rmar_1443 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmar_2149 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmar_0607 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D Rmar_1470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_1531 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_2654 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Rmar_0777 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rmar_0071 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_2782 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_2177 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_2870 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_1624 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_0779 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rmar_0773 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rmar_0775 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rmar_0776 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rmar_2244 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rmar_0772 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rmar_1697 histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Rmar_2228 multi-sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Rmar_2587 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rmar_2556 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rmar_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_0903 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_1779 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_1714 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Rmar_2624 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Rmar_1355 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D Rmar_2469 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Rmar_0025 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Rmar_0076 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Rmar_2429 transcriptional regulator, LuxR family K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Rmar_2618 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Rmar_0048 transcriptional regulator, LuxR family K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Rmar_0049 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Rmar_1076 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Rmar_0658 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Rmar_2317 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Rmar_2083 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rmr02024]
D Rmar_1042 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Rmar_1045 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Rmar_2687 Propeptide peptidase M4 and M36 K20274 zmpB; zinc metalloprotease ZmpB
D Rmar_1708 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rmar_0626 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rmar_2587 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rmar_2556 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rmar_0467 Mannan endo-1,4-beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Rmar_0016 Mannan endo-1,4-beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Rmar_2065 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Rmar_2761 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rmar_0744 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Rmar_1455 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Rmar_1102 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Rmar_1928 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Rmar_0862 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Rmar_2055 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Rmar_0369 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rmar_2372 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rmar_1027 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rmr02030]
D Rmar_0071 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_2782 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_2177 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_2870 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_1624 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_0773 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rmar_0779 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rmar_0775 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rmar_0776 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rmar_2244 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rmar_0772 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rmar_0777 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rmar_0789 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Rmar_0768 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Rmar_0767 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Rmar_0771 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rmar_0153 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rmar_0770 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rmr02040]
D Rmar_0791 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Rmar_0790 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Rmar_0789 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Rmar_0788 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D Rmar_0787 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Rmar_0786 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D Rmar_0769 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Rmar_0768 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Rmar_0767 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Rmar_0766 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Rmar_0765 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Rmar_0764 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Rmar_0763 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Rmar_0761 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Rmar_0762 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Rmar_2234 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Rmar_0795 flagellar basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D Rmar_0794 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Rmar_0782 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Rmar_0780 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE
D Rmar_2232 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D Rmar_2233 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Rmar_2235 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Rmar_2236 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Rmar_2237 peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D Rmar_2239 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Rmar_2240 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D Rmar_0803 flagellin domain protein K02406 fliC; flagellin
D Rmar_0804 flagellin domain protein K02406 fliC; flagellin
D Rmar_0800 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D Rmar_0801 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Rmar_0771 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rmar_0153 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rmar_0770 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rmar_0143 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Rmar_2654 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Rmar_0757 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Rmar_1688 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rmr04980]
D Rmar_1592 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Rmar_2433 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rmr01501]
D Rmar_0925 beta-lactamase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Rmar_2640 TonB family protein K02172 blaR1; bla regulator protein blaR1
D Rmar_2641 transcriptional regulator, TrmB K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Rmar_2815 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Rmar_0901 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rmar_0902 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Rmar_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_0903 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_1779 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_0274 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rmar_0630 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Rmar_2706 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rmr01502]
D Rmar_0135 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rmar_0998 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rmar_0994 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rmar_2483 Mur ligase middle domain protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Rmar_2704 phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rmar_2701 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rmr01503]
D Rmar_0812 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Rmar_1850 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rmar_2684 2-alkenal reductase K04771 degP; serine protease Do [EC:3.4.21.107]
D Rmar_0747 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rmar_0901 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rmar_0902 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Rmar_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_0903 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_1779 outer membrane efflux protein K12340 tolC; outer membrane protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rmr01000]
C 01001 Protein kinases [BR:rmr01001]
D Rmar_0507 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Rmar_0178 PASTA domain containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Rmar_2331 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Rmar_1323 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Rmar_0590 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Rmar_1126 capsular exopolysaccharide family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Rmar_2670 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Rmar_2314 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D Rmar_1861 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Rmar_2185 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Rmar_0773 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rmar_1697 histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Rmar_2228 multi-sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Rmar_1190 histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
C 01009 Protein phosphatases and associated proteins [BR:rmr01009]
D Rmar_2686 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rmar_2333 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:rmr01002]
D Rmar_2046 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Rmar_2591 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Rmar_1509 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rmar_0677 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rmar_1367 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D Rmar_1118 NLP/P60 protein K13695 nlpC; probable lipoprotein NlpC
D Rmar_2109 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Rmar_1260 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Rmar_0598 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rmar_0967 Asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rmar_2070 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rmar_2386 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rmar_0332 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D Rmar_0959 Abortive infection protein K07052 K07052; CAAX protease family protein
D Rmar_2569 Abortive infection protein K07052 K07052; CAAX protease family protein
D Rmar_1896 oligoendopeptidase, pepF/M3 family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Rmar_2687 Propeptide peptidase M4 and M36 K20274 zmpB; zinc metalloprotease ZmpB
D Rmar_1348 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Rmar_0089 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Rmar_1347 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Rmar_1710 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rmar_0827 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Rmar_0331 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Rmar_1037 peptidase M20 K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D Rmar_0345 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D Rmar_0863 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Rmar_1893 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D Rmar_1321 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Rmar_2092 Glutamate carboxypeptidase II K01301 NAALAD; N-acetylated-alpha-linked acidic dipeptidase [EC:3.4.17.21]
D Rmar_1392 Carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D Rmar_0836 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Rmar_1819 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Rmar_1961 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Rmar_2640 TonB family protein K02172 blaR1; bla regulator protein blaR1
D Rmar_0099 hypothetical protein K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33]
D Rmar_2053 hypothetical protein K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33]
D Rmar_2231 protein of unknown function DUF980 K09933 mtfA; MtfA peptidase
D Rmar_2417 peptidase S58 DmpA K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D Rmar_1850 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rmar_2684 2-alkenal reductase K04771 degP; serine protease Do [EC:3.4.21.107]
D Rmar_0747 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rmar_0744 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Rmar_0996 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D Rmar_1876 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Rmar_2219 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Rmar_2407 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Rmar_1793 peptidase S16 lon domain protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Rmar_1698 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Rmar_2710 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Rmar_2043 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rmar_2042 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rmar_1823 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Rmar_0124 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Rmar_1722 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Rmar_2310 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-]
D Rmar_1724 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D Rmar_2128 signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D Rmar_0276 Rhomboid family protein K07059 K07059; rhomboid family protein
D Rmar_0277 Rhomboid family protein K07059 K07059; rhomboid family protein
D Rmar_1300 Rhomboid family protein K07059 K07059; rhomboid family protein
D Rmar_1871 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Rmar_1877 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Rmar_1612 Asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Rmar_2546 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rmar_2108 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 01003 Glycosyltransferases [BR:rmr01003]
D Rmar_1399 Dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Rmar_2738 glycosyl transferase group 1 K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D Rmar_1131 glycosyl transferase group 1 K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D Rmar_1982 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Rmar_1684 Starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D Rmar_1116 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Rmar_0274 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rmar_0895 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Rmar_0980 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D Rmar_0502 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rmr01005]
D Rmar_0275 metallophosphoesterase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rmr01011]
D Rmar_1214 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rmar_2509 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rmar_2700 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Rmar_2703 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rmar_2705 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rmar_0135 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rmar_0998 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rmar_0994 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rmar_1871 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Rmar_2704 phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rmar_2701 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Rmar_2634 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rmar_0274 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rmar_0630 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Rmar_2706 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rmar_1876 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Rmar_2219 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Rmar_1116 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Rmar_0215 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D Rmar_2268 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Rmar_0114 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Rmar_2187 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Rmar_0812 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rmr01004]
D Rmar_2802 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rmar_0105 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rmar_2449 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rmar_2803 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rmar_2690 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rmar_2548 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rmar_1167 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2450 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_0816 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2801 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2612 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_1603 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_2136 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rmar_0386 enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rmar_0540 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Rmar_2137 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D Rmar_1499 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rmar_1427 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rmar_1708 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rmar_0626 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rmar_2447 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Rmar_2804 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Rmar_1269 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rmar_0569 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rmr01008]
D Rmar_0583 beta-lactamase domain protein K05555 actIV; cyclase [EC:4.-.-.-]
D Rmar_2072 FAD dependent oxidoreductase K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
D Rmar_1747 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
D Rmar_1753 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
D Rmar_1759 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
D Rmar_1760 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
D Rmar_1438 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4
D Rmar_2418 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:rmr01006]
D Rmar_1235 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Rmar_1909 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Rmar_1960 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Rmar_1601 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Rmar_1324 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Rmar_0586 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Rmar_1787 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:rmr01007]
D Rmar_1289 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rmar_1034 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rmar_1044 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Rmar_0807 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rmar_0632 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rmar_1568 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rmar_2048 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rmar_0722 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rmar_0671 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rmar_0302 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Rmar_2350 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rmar_1459 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Rmar_1619 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rmar_2477 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Rmar_1968 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rmar_2271 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rmar_0623 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rmar_1560 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rmar_0619 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rmar_0618 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rmar_0257 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rmar_1304 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-]
D Rmar_0667 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rmar_0699 pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Rmar_0106 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Rmar_0448 aminotransferase class I and II K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Rmar_2194 L-lysine 6-transaminase K03918 lat; L-lysine 6-transaminase [EC:2.6.1.36]
D Rmar_0947 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rmar_0104 adenosylmethionine-8-amino-7-oxononanoateaminotr ansferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Rmar_1199 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Rmar_2679 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rmar_2114 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D Rmar_2173 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Rmar_0724 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rmr00194]
D Rmar_0051 Rieske (2Fe-2S) domain protein K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D Rmar_0072 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Rmar_0073 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Rmar_0316 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Rmar_0315 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Rmar_0314 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Rmar_0313 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rmar_0312 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Rmar_0311 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rmar_0309 ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rmr03000]
D Rmar_2780 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D Rmar_0279 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rmar_0352 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rmar_0466 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rmar_1067 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rmar_1526 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rmar_1333 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rmar_2215 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D Rmar_1157 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Rmar_1229 transcriptional regulator, GntR family K07978 plmA; GntR family transcriptional regulator
D Rmar_2200 transcriptional regulator, TetR family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D Rmar_2148 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Rmar_2453 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Rmar_1602 DNA binding domain protein, excisionase family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D Rmar_0159 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Rmar_2587 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rmar_2556 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rmar_2009 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Rmar_2010 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Rmar_2579 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Rmar_0419 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Rmar_1390 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Rmar_2248 transcriptional regulator, XRE family K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D Rmar_1279 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Rmar_2641 transcriptional regulator, TrmB K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Rmar_0108 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Rmar_2028 sigma54 specific transcriptional regulator, Fis family K12146 hyfR; hydrogenase-4 transcriptional activator
D Rmar_0451 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Rmar_2127 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Rmar_0151 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D Rmar_2462 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D Rmar_1024 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Rmar_0177 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Rmar_0553 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Rmar_0197 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D Rmar_2047 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rmar_2709 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rmr03021]
D Rmar_2131 beta-lactamase domain protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
D Rmar_0869 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rmar_1108 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rmar_1109 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rmar_0143 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Rmar_2150 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rmar_2429 transcriptional regulator, LuxR family K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Rmar_2618 RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Rmar_0048 transcriptional regulator, LuxR family K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D Rmar_2654 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Rmar_0757 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Rmar_1308 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Rmar_0030 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Rmar_1103 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Rmar_0288 protein serine phosphatase with GAF(s) sensor(s) K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Rmar_0589 response regulator receiver modulated serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Rmar_0663 protein serine/threonine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Rmar_2329 protein serine phosphatase with GAF(s) sensor(s) K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Rmar_1453 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Rmar_2330 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Rmar_2331 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Rmar_1323 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Rmar_0590 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Rmar_2047 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rmar_1117 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Rmar_2309 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Rmar_2480 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rmr03019]
D Rmar_2131 beta-lactamase domain protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
D Rmar_0207 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Rmar_2661 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rmar_2899 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Rmar_0615 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Rmar_1200 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rmar_2800 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Rmar_2856 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Rmar_1056 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Rmar_1688 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rmar_1314 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Rmar_2309 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Rmar_2480 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Rmar_2333 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Rmar_2183 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rmar_1918 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rmar_1011 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Rmar_2544 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:rmr03011]
D Rmar_1292 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Rmar_0007 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Rmar_0848 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Rmar_0868 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Rmar_0859 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Rmar_0600 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Rmar_0838 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Rmar_0856 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Rmar_0006 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Rmar_0841 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Rmar_0867 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Rmar_0837 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Rmar_0866 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Rmar_0855 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Rmar_1313 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Rmar_1028 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Rmar_0851 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Rmar_0601 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Rmar_0846 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Rmar_0306 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Rmar_2369 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Rmar_1662 hypothetical protein K19033 PSRP4; 30S ribosomal protein S31
D Rmar_1105 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Rmar_0845 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Rmar_0842 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Rmar_0843 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Rmar_0854 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Rmar_0857 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Rmar_0602 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Rmar_1106 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Rmar_1104 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Rmar_1107 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Rmar_0005 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Rmar_0852 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Rmar_0861 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Rmar_0849 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Rmar_0870 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Rmar_0858 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Rmar_1031 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Rmar_0620 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Rmar_1113 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Rmar_0847 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Rmar_0844 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Rmar_0853 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Rmar_1112 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Rmar_0021 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Rmar_0850 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Rmar_0860 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Rmar_0077 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Rmar_2805 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Rmar_0020 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Rmar_2763 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Rmar_0621 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Rmar_0865 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Rmar_2415 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Rmar_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rmar_R0006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rmar_R0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rmr03009]
D Rmar_2661 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rmar_2475 GTPase or GTP-binding protein-like protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
D Rmar_0251 GTP-binding protein Era K03595 era; GTPase
D Rmar_1986 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Rmar_2047 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rmar_1308 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Rmar_0030 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Rmar_1103 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Rmar_2603 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Rmar_0347 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Rmar_0918 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Rmar_0255 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Rmar_1925 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Rmar_2756 glucose inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Rmar_2708 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Rmar_0240 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Rmar_1580 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Rmar_1493 Protein of unknown function methylase putative K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Rmar_0928 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Rmar_2557 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Rmar_0069 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D Rmar_1319 RNA-binding S4 domain protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Rmar_1191 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Rmar_1621 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Rmar_2685 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D Rmar_1029 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Rmar_2327 ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Rmar_0038 Cupin 4 family protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D Rmar_0207 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Rmar_0873 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Rmar_2800 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Rmar_1702 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Rmar_2632 small GTP-binding protein K03977 engA; GTPase
D Rmar_2721 GTP-binding proten HflX K03665 hflX; GTPase
D Rmar_1588 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Rmar_0871 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Rmar_1310 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Rmar_1307 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Rmar_2263 iojap-like protein K09710 ybeB; ribosome-associated protein
D Rmar_0237 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Rmar_0027 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Rmar_2806 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rmr03016]
D Rmar_0417 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D Rmar_1910 beta-lactamase domain protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D Rmar_0504 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Rmar_0655 protein of unknown function DUF101 K24956 ZBTB8OS; protein archease
D Rmar_1289 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rmar_2271 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rmar_2048 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rmar_0671 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rmar_1568 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rmar_0632 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rmar_0302 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Rmar_2350 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rmar_1560 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rmar_1459 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Rmar_2477 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Rmar_0623 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rmar_1968 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rmar_0807 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rmar_0722 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rmar_1619 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rmar_0619 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rmar_0618 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rmar_1034 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rmar_1044 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Rmar_2367 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Rmar_0191 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Rmar_2517 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Rmar_2487 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Rmar_1311 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Rmar_0716 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rmar_1215 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rmar_1588 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Rmar_1324 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Rmar_2760 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Rmar_2757 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Rmar_2420 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Rmar_2762 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Rmar_R0033 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Rmar_2513 Exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D Rmar_1576 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Rmar_2493 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Rmar_0403 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Rmar_2062 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Rmar_1997 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Rmar_1030 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Rmar_2638 tRNA/rRNA methyltransferase (SpoU) K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D Rmar_1371 putative RNA methylase K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256]
D Rmar_0700 RNA methylase, NOL1/NOP2/sun family K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-]
D Rmar_0464 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Rmar_0069 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D Rmar_0817 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Rmar_2021 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D Rmar_1342 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D Rmar_2100 FAD dependent oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D Rmar_1097 S-adenosylmethionine/tRNA-ribosyltransferase-iso merase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Rmar_0319 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Rmar_0192 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Rmar_0320 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Rmar_0318 queuosine biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Rmar_0321 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Rmar_0304 iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Rmar_0710 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Rmar_0596 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Rmar_0964 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Rmar_2256 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Rmar_2266 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Rmar_2519 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Rmar_1200 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rmar_1314 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Rmar_1848 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:rmr03012]
D Rmar_1309 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Rmar_0008 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Rmar_1101 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rmar_0840 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rmar_2255 small GTP-binding protein K02355 fusA; elongation factor G
D Rmar_0839 translation elongation factor G K02355 fusA; elongation factor G
D Rmar_0599 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Rmar_0010 ribosome recycling factor K02838 frr; ribosome recycling factor
D Rmar_1808 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Rmar_2414 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Rmar_0864 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Rmar_0673 translation elongation factor P K02356 efp; elongation factor P
D Rmar_1305 LigA K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:rmr03110]
D Rmar_2465 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Rmar_1343 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Rmar_0701 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Rmar_1879 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Rmar_2183 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rmar_1918 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rmar_2125 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Rmar_2511 heat shock protein DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Rmar_2126 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Rmar_0989 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Rmar_1296 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Rmar_1824 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Rmar_1919 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rmar_2246 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rmar_1850 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rmar_2684 2-alkenal reductase K04771 degP; serine protease Do [EC:3.4.21.107]
D Rmar_0747 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rmar_0836 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Rmar_0311 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rmar_2592 hydrogenase expression/synthesis HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Rmar_2581 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Rmar_0744 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Rmar_2797 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Rmar_0756 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Rmar_0719 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Rmar_1286 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Rmar_1288 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Rmar_0180 thioredoxin K03671 TXN; thioredoxin
D Rmar_0265 thioredoxin K03671 TXN; thioredoxin
D Rmar_1038 thioredoxin K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:rmr04131]
D Rmar_2216 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rmar_1799 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rmar_0833 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rmar_1842 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:rmr04121]
C 03051 Proteasome [BR:rmr03051]
C 03032 DNA replication proteins [BR:rmr03032]
D Rmar_1987 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Rmar_1519 hypothetical protein K03530 hupB; DNA-binding protein HU-beta
D Rmar_0872 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta
D Rmar_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Rmar_0015 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Rmar_0977 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Rmar_0746 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rmar_2847 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D Rmar_1917 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rmar_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rmar_2629 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rmar_2254 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rmar_1505 putative sensor with HAMP domain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_1242 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_0479 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_2608 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rmar_2485 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Rmar_1349 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rmar_1222 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Rmar_1412 DNA polymerase B region K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D Rmar_2890 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Rmar_1272 DNA topoisomerase (ATP-hydrolyzing) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Rmar_2192 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Rmar_2717 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Rmar_1273 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Rmar_1704 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rmr03036]
D Rmar_2661 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rmar_1519 hypothetical protein K03530 hupB; DNA-binding protein HU-beta
D Rmar_0872 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta
D Rmar_2511 heat shock protein DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Rmar_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Rmar_0943 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D Rmar_2148 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Rmar_0643 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D Rmar_1317 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D Rmar_1318 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B
D Rmar_2698 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Rmar_1689 Septum formation initiator K05589 ftsB; cell division protein FtsB
D Rmar_1650 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein
D Rmar_2706 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rmar_1806 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Rmar_2699 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ
D Rmar_2702 cell cycle protein K03588 ftsW; cell division protein FtsW
D Rmar_0634 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Rmar_2697 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Rmar_0616 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA
D Rmar_0812 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Rmar_0901 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rmar_2167 DivIVA family protein K04074 divIVA; cell division initiation protein
D Rmar_1874 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Rmar_1875 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Rmar_0631 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Rmar_2871 hypothetical protein K03496 parA; chromosome partitioning protein
D Rmar_0452 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Rmar_1506 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Rmar_0451 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Rmar_1273 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Rmar_2757 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Rmar_2756 glucose inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Rmar_0404 integrase family protein K03733 xerC; integrase/recombinase XerC
D Rmar_1326 integrase family protein K04763 xerD; integrase/recombinase XerD
D Rmar_2325 Cobyrinic acid ac-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Rmar_2497 small GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rmr03400]
D Rmar_1604 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Rmar_1529 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Rmar_1923 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Rmar_1446 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Rmar_1838 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Rmar_2348 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Rmar_0014 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rmar_2622 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rmar_0625 Deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D Rmar_2564 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rmar_1222 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Rmar_1349 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rmar_0081 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Rmar_2732 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Rmar_0047 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Rmar_1254 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Rmar_0398 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rmar_0453 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rmar_1108 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rmar_1109 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rmar_0869 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rmar_2754 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Rmar_1542 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Rmar_0730 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D Rmar_0963 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Rmar_1356 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Rmar_2037 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Rmar_1917 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rmar_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rmar_2629 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rmar_2254 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rmar_1505 putative sensor with HAMP domain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_1242 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_0479 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rmar_2608 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rmar_0746 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rmar_2847 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D Rmar_2890 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Rmar_2179 recA protein K03553 recA; recombination protein RecA
D Rmar_2313 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Rmar_2652 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Rmar_2400 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Rmar_2052 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Rmar_1257 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D Rmar_0273 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D Rmar_2341 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Rmar_2750 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Rmar_1090 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Rmar_2142 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Rmar_0406 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Rmar_2610 recombination protein RecR K06187 recR; recombination protein RecR
D Rmar_0370 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Rmar_2841 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Rmar_1630 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Rmar_2913 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Rmar_0486 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Rmar_1272 DNA topoisomerase (ATP-hydrolyzing) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Rmar_2192 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Rmar_2717 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Rmar_1704 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Rmar_1519 hypothetical protein K03530 hupB; DNA-binding protein HU-beta
D Rmar_0872 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta
D Rmar_2856 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Rmar_1056 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Rmar_2710 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Rmar_0661 regulatory protein RecX K03565 recX; regulatory protein
D Rmar_1723 PHP domain protein K02347 polX; DNA polymerase (family X)
D Rmar_2094 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Rmar_0037 NUDIX hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D Rmar_0342 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rmar_0431 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rmar_2540 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rmar_0430 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Rmar_1711 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:rmr03029]
D Rmar_1309 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Rmar_0008 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Rmar_1101 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rmar_0840 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rmar_2255 small GTP-binding protein K02355 fusA; elongation factor G
D Rmar_0839 translation elongation factor G K02355 fusA; elongation factor G
D Rmar_0251 GTP-binding protein Era K03595 era; GTPase
D Rmar_1034 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rmar_0671 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rmar_2350 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rmar_2477 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Rmar_0632 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rmar_2499 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rmar_1478 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Rmar_0570 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Rmar_0746 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rmar_2847 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D Rmar_0703 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Rmar_1959 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Rmar_1924 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Rmar_2183 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rmar_2126 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Rmar_1918 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rmar_1919 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rmar_2246 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rmar_2125 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Rmar_0716 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rmar_1215 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rmar_1974 acyl-CoA dehydrogenase domain protein K15980 ACAD9; acyl-CoA dehydrogenase family member 9 [EC:1.3.99.-]
D Rmar_2325 Cobyrinic acid ac-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Rmar_1787 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Rmar_1786 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Rmar_2761 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rmar_1172 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D Rmar_0228 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rmr02000]
D Rmar_1128 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Rmar_0416 cyclic nucleotide-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Rmar_0418 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Rmar_0971 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Rmar_0056 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Rmar_0055 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Rmar_0054 molybdate ABC transporter, ATPase subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Rmar_0365 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rmar_2344 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rmar_0707 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rmar_2342 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rmar_0705 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rmar_2343 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rmar_0706 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rmar_2693 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Rmar_0358 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Rmar_0359 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Rmar_0360 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Rmar_1829 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rmar_1828 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Rmar_1827 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Rmar_1826 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Rmar_0606 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Rmar_1084 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Rmar_0605 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Rmar_1591 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Rmar_1278 periplasmic solute binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D Rmar_1276 ABC-3 protein K11708 troC; manganese/zinc/iron transport system permease protein
D Rmar_1275 ABC-3 protein K11709 troD; manganese/zinc/iron transport system permease protein
D Rmar_1277 ABC transporter related protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D Rmar_0241 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Rmar_1695 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Rmar_0595 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Rmar_2016 copper ABC transporter, permease protein K19341 nosY; Cu-processing system permease protein
D Rmar_2015 heme exporter protein CcmA K19340 nosF; Cu-processing system ATP-binding protein
D Rmar_1769 ABC-2 type transporter K25151 gldF; gliding motility-associated transport system permease protein
D Rmar_1770 ABC transporter related protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D Rmar_1768 ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D Rmar_1782 ABC-2 type transporter K25180 ybhR; drug efflux transport system permease protein
D Rmar_1781 ABC-2 type transporter K25181 ybhS; drug efflux transport system permease protein
D Rmar_1780 ABC transporter related protein K25182 ybhF; drug efflux transport system ATP-binding protein
D Rmar_1778 ABC transporter related protein K25182 ybhF; drug efflux transport system ATP-binding protein
D Rmar_1777 secretion protein HlyD family protein K25183 ybhG; membrane fusion protein YbhG
D Rmar_1338 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Rmar_0023 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Rmar_1796 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Rmar_2426 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D Rmar_2427 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D Rmar_1411 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Rmar_0634 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Rmar_1650 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein
D Rmar_2404 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rmar_1789 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rmar_1054 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rmar_2403 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rmar_0518 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rmar_1788 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rmar_1441 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Rmar_1442 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Rmar_0456 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Rmar_0457 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Rmar_0542 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Rmar_0541 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Rmar_0068 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Rmar_2536 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Rmar_2023 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Rmar_2078 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D Rmar_2076 major facilitator superfamily MFS_1 K02429 fucP; MFS transporter, FHS family, L-fucose permease
D Rmar_1170 major facilitator superfamily MFS_1 K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D Rmar_0539 major facilitator superfamily MFS_1 K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D Rmar_2773 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Rmar_1842 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D Rmar_1237 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Rmar_1236 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Rmar_0040 Ion transport protein K10716 kch; voltage-gated potassium channel
D Rmar_2039 TrkA-N domain protein K10716 kch; voltage-gated potassium channel
D Rmar_2529 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Rmar_2528 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Rmar_0441 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Rmar_0442 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Rmar_2602 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Rmar_0647 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Rmar_0951 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Rmar_1801 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D Rmar_2786 magnesium transporter K06213 mgtE; magnesium transporter
D Rmar_0771 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rmar_0153 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rmar_0770 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rmar_1521 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Rmar_1721 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Rmar_1522 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Rmar_1870 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D Rmar_0908 CrcB protein K06199 crcB; fluoride exporter
D Rmar_1389 Mercuric transport protein MerT K08363 merT; mercuric ion transport protein
D Rmar_0095 CBS domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rmar_2111 CBS domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rmar_0830 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rmar_0134 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D Rmar_2675 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D Rmar_1077 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Rmar_0915 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Rmar_0687 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Rmar_1482 TonB-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D Rmar_1088 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Rmar_0653 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Rmar_1095 TonB-dependent receptor plug K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Rmar_2201 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Rmar_0685 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rmar_2785 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rmar_1978 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rmar_2133 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rmar_2188 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rmar_0876 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rmar_0516 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Rmar_2456 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Rmar_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_0903 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_1779 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_1714 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Rmar_2624 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Rmar_1771 Carbohydrate-selective porin OprB K07267 oprB; porin
D Rmar_0703 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Rmar_1959 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Rmar_1924 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Rmar_1729 Pyrrolo-quinoline quinone K17713 bamB; outer membrane protein assembly factor BamB
D Rmar_0679 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD
D Rmar_0704 protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB
D Rmar_1201 protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB
D Rmar_0911 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Rmar_1295 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D Rmar_0515 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D Rmar_2458 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Rmar_0902 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Rmar_0879 acriflavin resistance protein K18989 vexF; multidrug efflux pump
D Rmar_1053 hypothetical protein K03297 emrE; small multidrug resistance pump
D Rmar_0556 gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter
D Rmar_0608 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D Rmar_1616 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D Rmar_2448 Na+/solute symporter K14392 panF; sodium/pantothenate symporter
D Rmar_1496 Na+/solute symporter K14393 actP; cation/acetate symporter
D Rmar_2666 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D Rmar_1817 Na+/H+ antiporter NhaC K18218 tet35; tetracycline resistance efflux pump
D Rmar_1301 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D Rmar_2663 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D Rmar_2667 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter
D Rmar_0138 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D Rmar_0735 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D Rmar_0139 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Rmar_0734 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Rmar_2711 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Rmar_1059 Chloride channel core K03281 clcA; chloride channel protein, CIC family
D Rmar_2467 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter
D Rmar_2574 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D Rmar_1064 natural resistance-associated macrophage protein K03322 mntH; manganese transport protein
D Rmar_2677 conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter
D Rmar_0082 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D Rmar_2702 cell cycle protein K03588 ftsW; cell division protein FtsW
D Rmar_2007 MtN3 and saliva related transmembrane protein K15383 K15383; MtN3 and saliva related transmembrane protein
D Rmar_1490 TonB family protein K03832 tonB; periplasmic protein TonB
D Rmar_0459 TonB family protein K03832 tonB; periplasmic protein TonB
D Rmar_2003 TonB family protein K03832 tonB; periplasmic protein TonB
D Rmar_1008 TonB family protein K03832 tonB; periplasmic protein TonB
D Rmar_1422 TonB family protein K03832 tonB; periplasmic protein TonB
D Rmar_0249 periplasmic component of the Tol biopolymer transport system-like protein K03641 tolB; TolB protein
D Rmar_2413 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Rmar_0514 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D Rmar_2457 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Rmar_0901 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rmar_0880 efflux transporter, RND family, MFP subunit K18990 vexE; membrane fusion protein, multidrug efflux system
D Rmar_1126 capsular exopolysaccharide family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Rmar_1481 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Rmar_1078 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Rmar_2081 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Rmar_0688 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Rmar_2506 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Rmar_1761 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Rmar_0916 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D Rmar_2566 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Rmar_2567 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Rmar_1041 cytochrome c assembly protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D Rmar_2288 copper resistance D K07245 pcoD; copper resistance protein D
C 02044 Secretion system [BR:rmr02044]
D Rmar_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_0903 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_1779 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_2033 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Rmar_0558 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Rmar_0563 type II secretion system protein E K02669 pilT; twitching motility protein PilT
D Rmar_0407 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA
D Rmar_0031 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D Rmar_0761 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Rmar_0762 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Rmar_0790 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Rmar_0788 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D Rmar_0787 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Rmar_0767 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Rmar_0766 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Rmar_0765 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Rmar_0764 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Rmar_0763 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Rmar_0369 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rmar_1455 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Rmar_1102 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Rmar_1454 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Rmar_1928 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Rmar_0862 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Rmar_1027 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rmar_2372 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rmar_2055 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Rmar_2761 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rmar_2500 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Rmar_0125 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rmr02042]
D Rmar_0095 CBS domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rmar_2111 CBS domain containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rmar_0830 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rmar_0640 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:rmr02022]
D Rmar_2670 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Rmar_0614 putative two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Rmar_1501 response regulator receiver protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Rmar_1173 response regulator receiver protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Rmar_2671 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Rmar_0513 two component transcriptional regulator, winged helix family K07669 mprA; two-component system, OmpR family, response regulator MprA
D Rmar_2436 response regulator receiver protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Rmar_2314 histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D Rmar_1861 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Rmar_2185 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Rmar_1860 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Rmar_2186 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Rmar_0607 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D Rmar_0773 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rmar_0775 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rmar_0776 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rmar_2244 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rmar_0772 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rmar_1697 histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Rmar_2228 multi-sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Rmar_1190 histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
C 02035 Bacterial motility proteins [BR:rmr02035]
D Rmar_0773 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rmar_0779 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rmar_0777 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rmar_0772 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rmar_0775 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rmar_0776 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rmar_2244 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rmar_0071 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_2782 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_2177 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_2870 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_1624 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rmar_0788 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D Rmar_0787 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Rmar_0786 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D Rmar_0766 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Rmar_0765 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Rmar_0764 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Rmar_0763 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Rmar_0761 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Rmar_0762 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Rmar_0789 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Rmar_0768 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Rmar_0767 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Rmar_0790 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Rmar_2236 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Rmar_2234 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Rmar_2235 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Rmar_0769 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Rmar_0791 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Rmar_0795 flagellar basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D Rmar_0794 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Rmar_0782 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Rmar_2232 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D Rmar_2233 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Rmar_2237 peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D Rmar_0780 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE
D Rmar_2239 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Rmar_2240 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D Rmar_0803 flagellin domain protein K02406 fliC; flagellin
D Rmar_0804 flagellin domain protein K02406 fliC; flagellin
D Rmar_0800 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D Rmar_0801 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Rmar_0757 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Rmar_0771 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rmar_0153 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rmar_0770 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rmar_0760 Flagellar GTP-binding protein-like protein K02404 flhF; flagellar biosynthesis protein FlhF
D Rmar_0759 cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D Rmar_0563 type II secretion system protein E K02669 pilT; twitching motility protein PilT
D Rmar_2033 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Rmar_0558 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rmr04812]
D Rmar_1874 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Rmar_2697 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Rmar_2698 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Rmar_2871 hypothetical protein K03496 parA; chromosome partitioning protein
D Rmar_0452 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Rmar_1506 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Rmar_0451 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rmr04147]
D Rmar_1688 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rmar_1799 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rmar_0833 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rmar_0827 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Rmar_0331 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Rmar_1918 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rmar_2183 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rmar_0033 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rmar_0996 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D Rmar_1320 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Rmar_1101 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rmar_0840 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rmar_0191 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Rmar_0132 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Rmar_1708 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rmar_0626 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rmar_1470 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_1531 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rmar_2686 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rmar_1234 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Rmar_0813 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Rmar_1625 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rmar_0950 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rmar_1216 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Rmar_0490 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Rmar_2550 Galactokinase-like protein K00849 galK; galactokinase [EC:2.7.1.6]
D Rmar_1886 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Rmar_1443 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmar_2149 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rmar_0806 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Rmar_1250 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Rmar_1241 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rmar_0524 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rmar_1474 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rmar_2174 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rmar_1873 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rmar_1972 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rmar_1433 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Rmar_2129 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Rmar_2298 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Rmar_1476 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:rmr02048]
D Rmar_2841 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Rmar_1630 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Rmar_2913 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Rmar_0486 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Rmar_2912 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Rmar_1629 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Rmar_0487 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Rmar_2840 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Rmar_0480 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Rmar_1639 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Rmar_2808 CRISPR-associated helicase Cas3, Anaes-subtype K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Rmar_1642 hypothetical protein K19088 cst1; CRISPR-associated protein Cst1
D Rmar_1641 CRISPR-associated autoregulator, DevR family K19075 cst2; CRISPR-associated protein Cst2
D Rmar_1638 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Rmar_1640 CRISPR-associated protein Cas5 K19090 cas5t; CRISPR-associated protein Cas5t
D Rmar_1643 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Rmar_0481 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA
D Rmar_0482 CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB
D Rmar_0483 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC
D Rmar_0484 CRISPR-associated protein Cas5 family K19125 casD; CRISPR system Cascade subunit CasD
D Rmar_0485 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE
D Rmar_2810 conserved hypothetical protein K19131 csb1; CRISPR-associated protein Csb1
D Rmar_2809 CRISPR-associated protein, GSU0054 family K19132 csb2; CRISPR-associated protein Csb2
D Rmar_2826 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
D Rmar_1637 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
D Rmar_2825 CRISPR-associated protein, Csm2 family K19138 csm2; CRISPR-associated protein Csm2
D Rmar_1636 CRISPR-associated protein, Csm2 family K19138 csm2; CRISPR-associated protein Csm2
D Rmar_2824 CRISPR-associated RAMP protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3
D Rmar_1635 CRISPR-associated RAMP protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3
D Rmar_1634 CRISPR-associated RAMP protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D Rmar_2823 CRISPR-associated RAMP protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D Rmar_2822 CRISPR-associated RAMP protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5
D Rmar_1633 CRISPR-associated RAMP protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5
D Rmar_2832 CRISPR-associated protein, TM1812 family K19145 csx16; CRISPR-associated protein Csx16
D Rmar_1093 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Rmar_2892 type III restriction protein res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Rmar_1091 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Rmar_2893 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Rmar_1089 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Rmar_2890 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Rmar_2525 DNA methylase N-4/N-6 domain protein K24451 zim; modification methylase
D Rmar_1024 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Rmar_1848 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Rmar_2697 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Rmar_1874 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Rmar_1273 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Rmar_1289 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rmar_0716 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rmar_1215 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rmr04090]
D Rmar_0996 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:rmr01504]
D Rmar_1817 Na+/H+ antiporter NhaC K18218 tet35; tetracycline resistance efflux pump
D Rmar_1990 streptogramin lyase K18235 vgb; virginiamycin B lyase [EC:4.2.99.-]
D Rmar_2640 TonB family protein K02172 blaR1; bla regulator protein blaR1
D Rmar_2641 transcriptional regulator, TrmB K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Rmar_2815 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Rmar_0901 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rmar_0902 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Rmar_2453 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Rmar_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_0903 outer membrane efflux protein K12340 tolC; outer membrane protein
D Rmar_1779 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rmr00537]
D Rmar_1241 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rmar_0524 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rmar_0119 Alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D Rmar_0827 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Rmar_0331 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rmr03100]
D Rmar_R0040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rmar_R0008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rmar_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rmar_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmar_R0041 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmar_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmar_R0034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rmar_R0048 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Rmar_R0021 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Rmar_R0002 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Rmar_R0046 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rmar_R0039 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rmar_R0035 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rmar_R0018 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rmar_R0050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rmar_R0024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rmar_R0019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rmar_R0036 tRNA-His K14226 tRNA-His; tRNA His
D Rmar_R0007 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rmar_R0017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmar_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmar_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmar_R0012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmar_R0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rmar_R0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rmar_R0013 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rmar_R0045 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rmar_R0043 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rmar_R0042 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rmar_R0032 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Rmar_R0016 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rmar_R0029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rmar_R0004 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rmar_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmar_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmar_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmar_R0011 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rmar_R0025 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rmar_R0031 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rmar_R0022 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rmar_R0026 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Rmar_R0023 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Rmar_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rmar_R0049 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rmar_R0015 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rmar_R0006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rmar_R0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rmar_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rmar_R0038 ffs; SRP RNA; RNA component of signal recognitionparti cle K01983 ffs; SRP RNA
D Rmar_R0033 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Rmar_R0014 ssrA; tmRNA as predicted by Rfam (RF00023), score 171.88 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Rmar_0166 2,5-didehydrogluconate reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D Rmar_1738 glucose-methanol-choline oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D Rmar_1737 glucose-methanol-choline oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D Rmar_2765 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Rmar_0528 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Rmar_2764 molybdopterin dehydrogenase FAD-binding protein K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D Rmar_0530 molybdopterin dehydrogenase FAD-binding protein K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D Rmar_2766 carbon-monoxide dehydrogenase, large subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D Rmar_0529 Carbon-monoxide dehydrogenase (acceptor) K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D Rmar_0584 (2Fe-2S)-binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D Rmar_0585 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D Rmar_1434 Electron-transferring-flavoproteindehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D Rmar_2494 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D Rmar_2736 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Rmar_1426 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Rmar_0538 oxidoreductase molybdopterin binding protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D Rmar_2783 manganese containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D Rmar_1485 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Rmar_2145 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Rmar_1364 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Rmar_1284 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Rmar_0375 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Rmar_2539 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Rmar_1488 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Rmar_0147 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Rmar_1507 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Rmar_1851 phospholipid/glycerol acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D Rmar_2335 leucyl/phenylalanyl-tRNA/protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Rmar_2440 glycosidase PH1107-related protein K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281]
D Rmar_2614 glycosidase PH1107-related protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D Rmar_0362 glycosidase PH1107-related protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D Rmar_0363 glycosidase PH1107-related protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D Rmar_0245 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D Rmar_0533 protein of unknown function DUF43 K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128]
D Rmar_1618 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Rmar_2071 Radical SAM domain protein K06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-]
D Rmar_1835 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Rmar_0146 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Rmar_2552 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D Rmar_1628 protein of unknown function DUF303 acetylesterase putative K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D Rmar_2547 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Rmar_2642 GDSL family lipase K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]
D Rmar_0218 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Rmar_1931 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Rmar_1207 phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Rmar_1228 7TM receptor with intracellular metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D Rmar_2184 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Rmar_2510 alpha/beta hydrolase fold protein K01175 ybfF; esterase [EC:3.1.-.-]
D Rmar_0896 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Rmar_1074 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Rmar_1069 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Rmar_1480 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D Rmar_1079 Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D Rmar_1774 glycoside hydrolase family 37 K25649 mgh; mannosylglycerate hydrolase [EC:3.2.1.170]
D Rmar_2470 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D Rmar_2605 Alpha-glucosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D Rmar_1358 N-acyl-D-amino-acid deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D Rmar_0874 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Rmar_0672 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D Rmar_2672 LmbE family protein K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D Rmar_0815 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Rmar_1285 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Rmar_2551 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Rmar_1448 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D Rmar_0461 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Rmar_1166 Heparinase II/III family protein K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26]
D Rmar_2122 Pyridoxal-5'-phosphate-dependent protein beta subunit K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D Rmar_2439 N-acylglucosamine 2-epimerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11]
D Rmar_0641 peptidylprolyl isomerase FKBP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D Rmar_0923 Methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D Rmar_0829 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D Rmar_0239 RNA 3'-phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D Rmar_1535 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Rmar_0522 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D Rmar_0113 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB
D Rmar_2720 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB
D Rmar_0112 histone deacetylase superfamily K04768 acuC; acetoin utilization protein AcuC
D Rmar_0695 protein of unknown function DUF224 cysteine-rich region domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D Rmar_0696 protein of unknown function DUF162 K18929 lldF; L-lactate dehydrogenase complex protein LldF
D Rmar_0697 protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG
D Rmar_0669 conserved hypothetical protein K22136 bshC; bacillithiol synthase
D Rmar_1736 conserved hypothetical protein K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit
C 99982 Energy metabolism
D Rmar_2650 4Fe-4S ferredoxin iron-sulfur binding domain protein K05524 fdxA; ferredoxin
D Rmar_2289 4Fe-4S ferredoxin iron-sulfur binding domain protein K05524 fdxA; ferredoxin
D Rmar_1432 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Rmar_1435 4Fe-4S ferredoxin iron-sulfur binding domain protein K03855 fixX; ferredoxin like protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Rmar_2029 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D Rmar_2168 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Rmar_0892 O-antigen polymerase K16567 exoQ; exopolysaccharide production protein ExoQ
D Rmar_1578 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D Rmar_1933 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D Rmar_1536 ABC-1 domain protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
D Rmar_1384 Glyoxalase/bleomycin resistance protein/dioxygenase K15975 K15975; glyoxalase family protein
D Rmar_0333 DoxX family protein K15977 K15977; putative oxidoreductase
D Rmar_2730 DoxX family protein K15977 K15977; putative oxidoreductase
D Rmar_1425 DoxX family protein K15977 K15977; putative oxidoreductase
D Rmar_2379 DoxX family protein K15977 K15977; putative oxidoreductase
D Rmar_1784 acetyl coenzyme A synthetase (ADP forming), alpha domain protein K09181 yfiQ; acetyltransferase
D Rmar_1120 protein of unknown function DUF1094 K26958 brxA_B; bacilliredoxin
D Rmar_1897 hypothetical protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Rmar_0117 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Rmar_0235 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Rmar_1213 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Rmar_0531 conserved hypothetical protein K07745 K07745; transcriptional regulator
C 99974 Translation
C 99975 Protein processing
D Rmar_1993 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Rmar_2406 trigger factor K03545 tig; trigger factor
D Rmar_0537 Ferric reductase domain protein protein transmembrane component domain protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D Rmar_2580 HupE/UreJ protein K03192 ureJ; urease accessory protein
D Rmar_1033 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Rmar_2594 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D Rmar_2595 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Rmar_2596 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Rmar_2593 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Rmar_1523 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Rmar_1617 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
D Rmar_2637 OsmC family protein K07397 yhfA; putative redox protein
D Rmar_2770 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor
D Rmar_2772 Alanine dehydrogenase K07402 xdhC; xanthine dehydrogenase accessory factor
D Rmar_0391 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class)
D Rmar_0017 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D Rmar_2504 methylated-DNA/protein-cysteinemethyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D Rmar_2479 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Rmar_1447 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D Rmar_1985 DNA protecting protein DprA K04096 smf; DNA processing protein
D Rmar_1181 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein K04096 smf; DNA processing protein
D Rmar_0323 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Rmar_1631 hypothetical protein K07501 K07501; 3'-5' exonuclease
D Rmar_2857 hypothetical protein K07501 K07501; 3'-5' exonuclease
D Rmar_1232 Transposase-like protein K07488 K07488; transposase
D Rmar_1332 Transposase-like protein K07488 K07488; transposase
D Rmar_2140 Transposase-like protein K07488 K07488; transposase
D Rmar_1092 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D Rmar_1141 conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D Rmar_2858 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Rmar_1189 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Rmar_2881 transposase, IS605 OrfB family K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D Rmar_0090 phage shock protein A, PspA K03969 pspA; phage shock protein A
D Rmar_0262 Rhodanese domain protein K03972 pspE; phage shock protein E
D Rmar_0263 Rhodanese domain protein K03972 pspE; phage shock protein E
D Rmar_2609 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Rmar_0645 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Rmar_0491 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Rmar_2388 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Rmar_2604 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Rmar_0471 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Rmar_2441 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Rmar_0638 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Rmar_1227 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Rmar_2245 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Rmar_1908 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D Rmar_2112 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D Rmar_1649 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D Rmar_0394 Na+ dependent nucleoside transporter domain protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D Rmar_2293 protein of unknown function DUF542 ScdA domain protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D Rmar_1253 nucleoside recognition domain protein K06373 spmA; spore maturation protein A
D Rmar_1252 nucleoside recognition domain protein K06374 spmB; spore maturation protein B
D Rmar_1971 Peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D Rmar_2431 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Rmar_0754 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Rmar_1615 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase K07182 K07182; CBS domain-containing protein
D Rmar_2113 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase K07182 K07182; CBS domain-containing protein
D Rmar_0914 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K22747 AIFM3; apoptosis-inducing factor 3
C 99992 Structural proteins
D Rmar_1577 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D Rmar_1957 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Rmar_1958 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Rmar_0067 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Rmar_1440 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D Rmar_1825 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Rmar_0338 ApaG domain protein K06195 apaG; ApaG protein
D Rmar_2014 periplasmic copper-binding protein K07218 nosD; nitrous oxidase accessory protein
D Rmar_1376 copper resistance B precursor K07233 pcoB; copper resistance protein B
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Rmar_1726 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D Rmar_2110 hypothetical protein K05811 yfiM; putative lipoprotein
D Rmar_1555 phenyl acetic acid degradation protein K02617 paaY; phenylacetic acid degradation protein
D Rmar_1182 Patatin K07001 K07001; NTE family protein
D Rmar_1682 Patatin K07001 K07001; NTE family protein
D Rmar_2022 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Rmar_2024 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D Rmar_0702 ribonuclease BN K07058 K07058; membrane protein
D Rmar_0654 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D Rmar_1282 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA
D Rmar_0984 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE
D Rmar_2026 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE
D Rmar_2311 HAD superfamily (subfamily IA) hydrolase, TIGR01548 K11777 K11777; HAD superfamily phosphatase
D Rmar_1822 LemA family protein K03744 lemA; LemA protein
D Rmar_0156 protein of unknown function DUF368 K08974 K08974; putative membrane protein
D Rmar_2115 membrane-flanked domain protein K08981 K08981; putative membrane protein
D Rmar_1380 conserved hypothetical protein K08982 K08982; putative membrane protein
D Rmar_2030 protein of unknown function DUF477 K08988 K08988; putative membrane protein
C 99997 Function unknown
D Rmar_1821 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D Rmar_1945 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein
D Rmar_1111 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D Rmar_2821 ATPase K06921 K06921; uncharacterized protein
D Rmar_2340 CoA-binding domain protein K06929 K06929; uncharacterized protein
D Rmar_0366 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein
D Rmar_2739 conserved hypothetical protein K07003 K07003; uncharacterized protein
D Rmar_2421 PilT protein domain protein K07063 K07063; uncharacterized protein
D Rmar_2883 PilT protein domain protein K07063 K07063; uncharacterized protein
D Rmar_1954 PilT protein domain protein K07065 K07065; uncharacterized protein
D Rmar_1766 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D Rmar_2017 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D Rmar_1188 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D Rmar_0548 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D Rmar_2495 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D Rmar_1646 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D Rmar_1445 fumarate reductase/succinate dehydrogenase flavoprotein domain protein K07077 K07077; uncharacterized protein
D Rmar_2665 protein of unknown function DUF897 K07086 K07086; uncharacterized protein
D Rmar_0266 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rmar_0123 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rmar_0289 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Rmar_0421 metallophosphoesterase K07096 K07096; uncharacterized protein
D Rmar_0242 metallophosphoesterase K07098 K07098; uncharacterized protein
D Rmar_0348 metallophosphoesterase K07098 K07098; uncharacterized protein
D Rmar_0268 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Rmar_0269 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Rmar_1809 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D Rmar_1946 ABC transporter related protein K07128 K07128; uncharacterized protein
D Rmar_2376 VWA containing CoxE family protein K07161 K07161; uncharacterized protein
D Rmar_2769 VWA containing CoxE family protein K07161 K07161; uncharacterized protein
D Rmar_1840 protein of unknown function DUF164 K07164 K07164; uncharacterized protein
D Rmar_0809 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Rmar_0668 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D Rmar_0934 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D Rmar_1727 conserved hypothetical protein K09117 K09117; uncharacterized protein
D Rmar_1654 protein of unknown function DUF99 K09120 K09120; uncharacterized protein
D Rmar_1988 protein of unknown function DUF82 K09122 K09122; uncharacterized protein
D Rmar_0045 protein of unknown function DUF524 K09124 K09124; uncharacterized protein
D Rmar_0907 protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D Rmar_0443 hypothetical protein K09158 K09158; uncharacterized protein
D Rmar_1293 metal dependent phosphohydrolase K09163 K09163; uncharacterized protein
D Rmar_2116 membrane-flanked domain protein K09167 K09167; uncharacterized protein
D Rmar_2767 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D Rmar_1558 protein of unknown function DUF454 K09790 K09790; uncharacterized protein
D Rmar_1457 protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D Rmar_0381 protein of unknown function DUF328 K09861 K09861; uncharacterized protein
D Rmar_0493 protein of unknown function DUF486 K09922 K09922; uncharacterized protein
D Rmar_0478 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein
D Rmar_1732 Crp/FNR family transcriptional regulator K09992 K09992; uncharacterized protein
D Rmar_0709 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 25, 2024