+D GENES KO
#
KEGG Orthology (KO) - Romboutsia sp. CE17
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:roc00010]
D HF520_09265 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HF520_14815 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HF520_14525 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HF520_14220 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HF520_10180 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D HF520_11600 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HF520_00035 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HF520_08780 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HF520_00025 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HF520_00030 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HF520_00040 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HF520_00045 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00115 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HF520_00110 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HF520_14530 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HF520_11285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HF520_10185 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HF520_07185 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HF520_11650 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HF520_05080 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_10725 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_05940 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HF520_10170 PTS transporter subunit EIIC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:roc00020]
D HF520_00380 hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HF520_05790 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HF520_05785 isocitrate/isopropylmalate dehydrogenase family protein K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D HF520_11285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HF520_13590 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D HF520_10185 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:roc00030]
D HF520_14815 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HF520_09730 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HF520_08765 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HF520_14355 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HF520_14360 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HF520_00295 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HF520_03485 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HF520_08770 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HF520_08775 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HF520_14265 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HF520_10190 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HF520_02000 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HF520_09475 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HF520_05080 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_10725 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_14135 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HF520_02570 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HF520_02575 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D HF520_11600 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HF520_14220 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HF520_10180 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D HF520_14525 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:roc00040]
D HF520_02585 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D HF520_01955 tagaturonate reductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D HF520_01960 altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D HF520_02580 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D HF520_10655 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HF520_10495 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HF520_10580 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HF520_06275 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D HF520_06270 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D HF520_08745 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D HF520_09730 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HF520_08750 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
C 00051 Fructose and mannose metabolism [PATH:roc00051]
D HF520_10585 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HF520_10720 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D HF520_10710 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D HF520_10705 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D HF520_14525 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HF520_14220 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HF520_10180 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D HF520_11600 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HF520_00035 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HF520_08780 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HF520_08775 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HF520_14265 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HF520_02025 PTS sugar transporter subunit IIBC K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:roc00052]
D HF520_08590 DUF4931 domain-containing protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HF520_10490 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HF520_10535 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HF520_10495 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HF520_10580 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HF520_05080 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_10725 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_09265 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HF520_01895 glycoside hydrolase family 2 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HF520_06645 glycoside hydrolase family 2 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HF520_01730 pfkB; 1-phosphofructokinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D HF520_14525 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HF520_01745 gatY; tagatose-bisphosphate aldolase subunit GatY K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D HF520_11860 tagatose bisphosphate family class II aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D HF520_11850 lacA; galactose-6-phosphate isomerase subunit LacA K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D HF520_11855 lacB; galactose-6-phosphate isomerase subunit LacB K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D HF520_11830 lacG; 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D HF520_11840 PTS lactose/cellobiose transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D HF520_11835 PTS transporter subunit EIIC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D HF520_14410 PTS sugar transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D HF520_14415 agaB; PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D HF520_14420 PTS sugar transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D HF520_14425 PTS system mannose/fructose/sorbose family transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D HF520_01740 SIS domain-containing protein K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:roc00053]
D HF520_10655 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HF520_00300 PTS transporter subunit EIIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HF520_00305 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HF520_00310 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D HF520_06270 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D HF520_08745 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D HF520_06275 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HF520_00095 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D HF520_00090 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:roc00500]
D HF520_10495 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HF520_10580 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HF520_00675 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HF520_04315 glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HF520_08270 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D HF520_05950 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HF520_05945 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D HF520_05940 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HF520_02105 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HF520_02110 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HF520_02115 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D HF520_02100 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HF520_02120 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D HF520_11800 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D HF520_02125 glycoside hydrolase family 13 protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D HF520_11780 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D HF520_05080 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_10725 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_09265 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HF520_14815 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:roc00520]
D HF520_01525 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HF520_03905 glycosyl hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HF520_07670 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HF520_14430 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D HF520_02395 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D HF520_12495 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HF520_12500 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HF520_14130 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HF520_10060 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HF520_12485 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HF520_14490 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HF520_01690 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D HF520_01700 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D HF520_12270 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D HF520_04150 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D HF520_00670 helix-turn-helix domain-containing protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D HF520_10170 PTS transporter subunit EIIC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D HF520_09265 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HF520_05080 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_10725 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_10495 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HF520_10580 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HF520_10655 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HF520_08590 DUF4931 domain-containing protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HF520_10490 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HF520_10535 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HF520_14815 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HF520_10585 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HF520_10720 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D HF520_10710 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D HF520_10705 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D HF520_02105 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HF520_02110 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:roc00620]
D HF520_10185 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HF520_11285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HF520_11165 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HF520_11650 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HF520_09640 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HF520_07535 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D HF520_10200 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D HF520_00050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HF520_00110 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HF520_14530 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HF520_05845 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HF520_05590 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HF520_05865 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HF520_05595 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HF520_05855 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HF520_05850 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HF520_09650 FAD-binding protein K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D HF520_09655 electron transfer flavoprotein subunit alpha K26114 lctC; lactate dehydrogenase (NAD+,ferredoxin) subunit LctC
D HF520_09660 electron transfer flavoprotein subunit beta/FixA family protein K26115 lctB; lactate dehydrogenase (NAD+,ferredoxin) subunit LctB
D HF520_07185 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HF520_02835 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D HF520_06630 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D HF520_08695 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D HF520_10875 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HF520_14930 rhodanese-like domain-containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HF520_02155 larA; nickel-dependent lactate racemase K22373 larA; lactate racemase [EC:5.1.2.1]
D HF520_09665 larA; nickel-dependent lactate racemase K22373 larA; lactate racemase [EC:5.1.2.1]
D HF520_06085 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HF520_00390 pyruvate carboxylase subunit B K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D HF520_00405 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D HF520_13590 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D HF520_02250 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D HF520_05795 nifV; homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:roc00630]
D HF520_00380 hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HF520_05790 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HF520_01990 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HF520_03835 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HF520_12890 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HF520_08570 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HF520_11285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HF520_11255 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D HF520_00105 garR; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D HF520_00080 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HF520_02765 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D HF520_02570 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:roc00640]
D HF520_09640 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HF520_07535 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D HF520_10200 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D HF520_11285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HF520_11165 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HF520_07045 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D HF520_05845 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HF520_05590 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HF520_05865 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HF520_05595 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HF520_05855 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HF520_05850 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HF520_07185 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HF520_02925 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D HF520_02765 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D HF520_07570 propanediol/glycerol family dehydratase large subunit K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28]
D HF520_07565 propanediol/glycerol family dehydratase medium subunit K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28]
D HF520_07560 diol dehydratase small subunit K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28]
D HF520_07510 aldehyde dehydrogenase EutE K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
C 00650 Butanoate metabolism [PATH:roc00650]
D HF520_07045 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D HF520_11325 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D HF520_11650 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HF520_00405 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D HF520_00400 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D HF520_00395 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D HF520_04655 4-hydroxybutyrate dehydrogenase K18120 4hbD; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D HF520_11165 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HF520_10185 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HF520_05040 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:roc00660]
D HF520_05040 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HF520_02255 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HF520_02260 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HF520_00415 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D HF520_02265 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:roc00562]
D HF520_11080 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
D HF520_00035 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HF520_08780 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:roc00190]
D HF520_14470 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D HF520_14465 NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D HF520_14460 4Fe-4S dicluster domain-containing protein K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D HF520_14305 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HF520_14315 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HF520_14310 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HF520_14300 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HF520_14320 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HF520_14285 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HF520_14295 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HF520_14290 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HF520_11660 putative manganese-dependent inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:roc00710]
D HF520_00030 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HF520_00025 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HF520_11600 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HF520_14220 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HF520_10180 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D HF520_08765 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HF520_14355 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HF520_14360 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HF520_08775 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HF520_14265 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HF520_00035 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HF520_08780 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HF520_09730 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00720 Carbon fixation pathways in prokaryotes [PATH:roc00720]
D HF520_10185 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HF520_13590 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D HF520_00380 hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HF520_05790 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D HF520_05845 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HF520_05590 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HF520_05865 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HF520_05595 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HF520_05855 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HF520_05850 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HF520_14630 fdhF; formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D HF520_14645 4Fe-4S binding protein K25123 hydA2; iron hydrogenase HydA2 [EC:1.12.7.-]
D HF520_14640 4Fe-4S dicluster domain-containing protein K25124 hycB; FeS-containing electron transfer protein
D HF520_14650 4Fe-4S dicluster domain-containing protein K25124 hycB; FeS-containing electron transfer protein
D HF520_11310 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HF520_12215 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HF520_02340 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HF520_11300 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HF520_11305 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D HF520_11290 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HF520_08190 methyltetrahydrofolate cobalamin methyltransferase K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258]
D HF520_11265 dihydropteroate synthase K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258]
D HF520_11320 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D HF520_11260 cdhC; CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169]
D HF520_11270 acetyl-CoA decarbonylase/synthase complex subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D HF520_11275 acetyl-CoA decarbonylase/synthase complex subunit delta K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D HF520_07535 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D HF520_10200 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D HF520_09640 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:roc00680]
D HF520_14630 fdhF; formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D HF520_14645 4Fe-4S binding protein K25123 hydA2; iron hydrogenase HydA2 [EC:1.12.7.-]
D HF520_14640 4Fe-4S dicluster domain-containing protein K25124 hycB; FeS-containing electron transfer protein
D HF520_14650 4Fe-4S dicluster domain-containing protein K25124 hycB; FeS-containing electron transfer protein
D HF520_11270 acetyl-CoA decarbonylase/synthase complex subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D HF520_11275 acetyl-CoA decarbonylase/synthase complex subunit delta K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D HF520_11320 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D HF520_00045 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00115 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_11600 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HF520_14220 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HF520_10180 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D HF520_14525 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HF520_09640 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HF520_00040 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HF520_02275 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HF520_05650 histidine phosphatase family protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:roc00910]
D HF520_04235 AAA family ATPase K02588 nifH; nitrogenase iron protein NifH
D HF520_03770 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D HF520_05445 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D HF520_05450 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D HF520_05835 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D HF520_12370 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D HF520_14895 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HF520_08570 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HF520_03575 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HF520_00350 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:roc00920]
D HF520_08895 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D HF520_09150 asrA; anaerobic sulfite reductase subunit AsrA K16950 asrA; anaerobic sulfite reductase subunit A
D HF520_09145 asrB; anaerobic sulfite reductase subunit AsrB K16951 asrB; anaerobic sulfite reductase subunit B
D HF520_09140 asrC; sulfite reductase subunit C K00385 asrC; anaerobic sulfite reductase subunit C
D HF520_03595 nitrite/sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D HF520_10850 nitrite/sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D HF520_06165 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HF520_06170 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HF520_02595 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:roc00061]
D HF520_05845 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HF520_05590 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HF520_05865 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HF520_05595 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HF520_05855 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HF520_05850 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HF520_02600 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D HF520_05890 acyl carrier protein K02078 acpP; acyl carrier protein
D HF520_05880 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HF520_05895 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HF520_05870 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HF520_04415 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HF520_05630 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HF520_05875 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HF520_05860 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HF520_05885 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:roc00071]
D HF520_07045 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D HF520_11650 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:roc00121]
D HF520_07105 choloylglycine hydrolase family protein K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:roc00561]
D HF520_00080 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HF520_06075 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D HF520_08730 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D HF520_06070 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D HF520_08725 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D HF520_06065 PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D HF520_05565 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HF520_08430 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HF520_09625 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HF520_09965 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HF520_05125 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HF520_05670 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HF520_03255 phosphatase PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D HF520_06820 YegS/Rv2252/BmrU family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D HF520_08555 galactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D HF520_13355 glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:roc00564]
D HF520_09960 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HF520_04915 NAD(P)/FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D HF520_08715 NAD(P)/FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D HF520_09965 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HF520_05125 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HF520_05670 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HF520_03255 phosphatase PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D HF520_06820 YegS/Rv2252/BmrU family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D HF520_11080 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
D HF520_10280 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HF520_04755 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HF520_08805 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HF520_12295 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D HF520_14475 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D HF520_08755 sn-glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
D HF520_11080 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:roc00600]
D HF520_01895 glycoside hydrolase family 2 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HF520_06645 glycoside hydrolase family 2 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HF520_08215 exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:roc00230]
D HF520_06180 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HF520_09490 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HF520_09475 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HF520_05080 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_10725 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_14135 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HF520_12200 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HF520_12180 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D HF520_12190 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HF520_12175 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D HF520_12195 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D HF520_12210 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D HF520_12205 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D HF520_08630 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HF520_12185 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HF520_10890 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HF520_06615 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HF520_03880 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HF520_09470 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HF520_04505 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HF520_05740 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HF520_10005 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HF520_10260 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HF520_15030 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HF520_12235 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HF520_03480 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D HF520_12230 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HF520_09795 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HF520_04790 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HF520_04905 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HF520_04910 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HF520_01825 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HF520_13960 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HF520_05510 HD domain-containing protein K01129 dgt; dGTPase [EC:3.1.5.1]
D HF520_12305 deoxynucleoside kinase K15518 dgk; deoxyguanosine kinase [EC:2.7.1.113]
D HF520_10885 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HF520_14205 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HF520_11625 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D HF520_13080 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HF520_12310 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D HF520_05200 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D HF520_13850 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HF520_04200 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D HF520_04195 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D HF520_04190 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:roc00240]
D HF520_12835 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HF520_12840 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HF520_12360 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HF520_12355 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HF520_12345 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D HF520_15120 4Fe-4S binding protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D HF520_12350 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D HF520_12340 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HF520_12845 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HF520_04735 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HF520_02875 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D HF520_05665 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D HF520_09445 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D HF520_11525 nucleoside kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D HF520_06615 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HF520_03880 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HF520_14270 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D HF520_09840 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D HF520_12790 winged helix-turn-helix transcriptional regulator K16328 psuK; pseudouridine kinase [EC:2.7.1.83]
D HF520_12795 pseudouridine-5-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D HF520_09465 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D HF520_02760 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HF520_06225 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HF520_01825 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HF520_13960 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HF520_04790 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HF520_04905 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HF520_04910 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HF520_12310 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D HF520_01860 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D HF520_14030 deoxynucleoside kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HF520_01835 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HF520_14235 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D HF520_07305 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HF520_06725 FAD-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D HF520_15125 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:roc00250]
D HF520_08595 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_13955 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_06835 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HF520_10155 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D HF520_11190 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HF520_04795 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D HF520_09830 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D HF520_03840 carbon-nitrogen hydrolase family protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D HF520_07485 aspD; aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D HF520_13080 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HF520_08630 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HF520_12360 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HF520_03575 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HF520_12370 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D HF520_14895 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HF520_08570 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HF520_12835 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HF520_12840 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HF520_11520 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D HF520_12495 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HF520_12200 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:roc00260]
D HF520_06785 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HF520_08850 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HF520_15060 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HF520_05090 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HF520_06100 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D HF520_06095 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HF520_13025 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D HF520_00080 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HF520_00040 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HF520_02275 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HF520_05650 histidine phosphatase family protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D HF520_11285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HF520_11255 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D HF520_03025 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HF520_03030 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HF520_15065 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HF520_03015 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HF520_04995 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C 00270 Cysteine and methionine metabolism [PATH:roc00270]
D HF520_06165 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HF520_06170 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HF520_01550 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HF520_06550 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HF520_06665 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HF520_12865 dihydropteroate synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HF520_03725 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HF520_12455 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HF520_03710 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HF520_03715 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D HF520_09875 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D HF520_10005 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HF520_01710 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D HF520_12875 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HF520_06785 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HF520_08850 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HF520_15060 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HF520_05090 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HF520_02595 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D HF520_02590 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D HF520_05000 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HF520_08350 gshAB; bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D HF520_08595 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_13955 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_06835 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HF520_07185 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HF520_07485 aspD; aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D HF520_03025 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HF520_03030 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HF520_15065 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HF520_02275 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:roc00280]
D HF520_05000 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HF520_11285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HF520_07045 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:roc00290]
D HF520_03015 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HF520_04995 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HF520_02255 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HF520_02260 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HF520_00415 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D HF520_02265 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D HF520_05040 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HF520_05045 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HF520_05035 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HF520_05000 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HF520_02250 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:roc00300]
D HF520_05090 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HF520_06785 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HF520_08850 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HF520_15060 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HF520_00100 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HF520_15055 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HF520_15050 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D HF520_15045 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D HF520_09805 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HF520_07195 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D HF520_06780 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HF520_15070 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D HF520_04580 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HF520_10150 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HF520_10085 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:roc00310]
D HF520_11285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:roc00220]
D HF520_04200 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D HF520_04195 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D HF520_04190 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D HF520_11520 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D HF520_08570 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HF520_12835 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HF520_12840 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HF520_12370 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D HF520_14895 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HF520_08595 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_13955 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_06835 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:roc00330]
D HF520_03705 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D HF520_14025 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D HF520_03720 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D HF520_03715 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D HF520_03710 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HF520_04850 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D HF520_03550 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HF520_03555 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D HF520_08595 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_13955 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_06835 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:roc00340]
D HF520_11230 hisJ; histidinol-phosphatase HisJ K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:roc00350]
D HF520_08595 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_13955 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_06835 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HF520_11650 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism
D HF520_08595 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_13955 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_06835 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00380 Tryptophan metabolism [PATH:roc00380]
D HF520_11285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:roc00400]
D HF520_02065 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HF520_07880 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HF520_10210 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D HF520_09390 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D HF520_09420 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D HF520_09395 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D HF520_10205 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D HF520_10215 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D HF520_02060 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D HF520_05660 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D HF520_02070 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D HF520_08595 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_13955 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_06835 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:roc00410]
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HF520_06725 FAD-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D HF520_15125 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D HF520_07045 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:roc00430]
D HF520_12370 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D HF520_07535 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D HF520_10200 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D HF520_09640 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:roc00450]
D HF520_01550 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HF520_06550 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HF520_06665 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HF520_12865 dihydropteroate synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HF520_00650 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HF520_03470 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HF520_07415 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HF520_03055 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D HF520_03060 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D HF520_14080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:roc00460]
D HF520_00675 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HF520_04315 glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HF520_11190 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HF520_04795 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
C 00470 D-Amino acid metabolism [PATH:roc00470]
D HF520_14340 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HF520_08130 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HF520_12750 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HF520_11520 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D HF520_12745 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HF520_10075 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HF520_10155 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D HF520_09805 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HF520_06780 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:roc00480]
D HF520_05605 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D HF520_08350 gshAB; bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D HF520_05480 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HF520_11365 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HF520_03715 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:roc00511]
D HF520_08215 exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HF520_01895 glycoside hydrolase family 2 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HF520_06645 glycoside hydrolase family 2 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:roc00542]
D HF520_09500 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:roc00541]
D HF520_10495 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HF520_10580 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HF520_10490 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HF520_10535 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HF520_10655 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HF520_06995 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HF520_10585 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HF520_10720 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D HF520_10710 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D HF520_10705 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D HF520_14130 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HF520_04150 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D HF520_12270 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
C 00550 Peptidoglycan biosynthesis [PATH:roc00550]
D HF520_10060 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HF520_12485 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HF520_14490 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HF520_14115 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HF520_10075 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HF520_04580 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HF520_10150 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HF520_08130 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HF520_12750 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HF520_10085 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HF520_04750 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HF520_04890 undecaprenyl diphosphate synthase family protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HF520_00185 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HF520_08655 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HF520_10080 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HF520_10065 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HF520_11105 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HF520_02900 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HF520_09440 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HF520_10090 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D HF520_03045 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HF520_04720 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HF520_09185 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:roc00552]
D HF520_00185 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HF520_08655 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HF520_09500 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HF520_10450 CDP-glycerol--poly(glycerophosphate) glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D HF520_10410 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D HF520_10520 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D HF520_10745 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D HF520_08555 galactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D HF520_13355 glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D HF520_10445 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:roc00543]
D HF520_09500 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HF520_10390 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D HF520_06165 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:roc00730]
D HF520_05230 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D HF520_09255 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HF520_11185 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HF520_11180 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HF520_00625 hydG; [FeFe] hydrogenase H-cluster radical SAM maturase HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D HF520_01930 hydG; [FeFe] hydrogenase H-cluster radical SAM maturase HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D HF520_06500 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HF520_09545 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HF520_05235 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HF520_05250 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D HF520_09735 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HF520_09725 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D HF520_13850 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HF520_05240 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:roc00740]
D HF520_00870 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HF520_00860 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HF520_00875 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D HF520_00865 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D HF520_08885 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D HF520_05235 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HF520_06180 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HF520_09490 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:roc00750]
D HF520_08475 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D HF520_06095 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:roc00760]
D HF520_14065 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D HF520_09470 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HF520_04505 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HF520_05740 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HF520_06615 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HF520_03880 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HF520_02995 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D HF520_11005 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D HF520_08950 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D HF520_01785 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D HF520_02530 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:roc00770]
D HF520_05040 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HF520_05045 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HF520_05035 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HF520_12710 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D HF520_09785 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D HF520_09690 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HF520_02800 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HF520_14325 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HF520_05000 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HF520_06725 FAD-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D HF520_15125 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:roc00780]
D HF520_05870 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HF520_04415 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HF520_05630 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HF520_05875 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HF520_05860 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HF520_00620 hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D HF520_12725 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:roc00785]
D HF520_07480 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D HF520_11285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HF520_11255 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:roc00790]
D HF520_07900 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D HF520_05620 hypothetical protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D HF520_07890 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D HF520_07885 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D HF520_07895 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D HF520_07300 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HF520_14925 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D HF520_00870 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HF520_07920 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D HF520_07915 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D HF520_07910 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D HF520_07330 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HF520_07325 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HF520_07335 MogA/MoaB family molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HF520_02700 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D HF520_06970 mocA; molybdenum cofactor cytidylyltransferase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D HF520_14920 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:roc00670]
D HF520_07300 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HF520_11310 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HF520_12215 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HF520_02340 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HF520_11300 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HF520_11305 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D HF520_12190 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HF520_12185 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HF520_09770 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HF520_12865 dihydropteroate synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HF520_07305 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HF520_11290 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HF520_14375 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:roc00860]
D HF520_12055 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D HF520_12050 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HF520_11940 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HF520_11950 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D HF520_11945 cobA; uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D HF520_11820 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D HF520_11960 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D HF520_11955 cobalt-factor II C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D HF520_11970 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D HF520_11980 cobalt-precorrin-4 methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D HF520_11975 cbiG; cobalt-precorrin 5A hydrolase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D HF520_11965 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D HF520_11995 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D HF520_11985 decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D HF520_11990 cobalt-precorrin-7 (C(5))-methyltransferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D HF520_12000 cobalt-precorrin-8 methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D HF520_12020 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D HF520_12025 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D HF520_12015 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D HF520_12040 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D HF520_12035 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D HF520_12045 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D HF520_12030 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D HF520_12005 cobalamin biosynthesis protein K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D HF520_10265 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D HF520_12010 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D HF520_04265 pyridoxamine 5'-phosphate oxidase K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D HF520_02730 antibiotic biosynthesis monooxygenase K07145 isdG; heme oxygenase (staphylobilin-producing) [EC:1.14.99.48]
D HF520_00125 biliverdin-producing heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:roc00900]
D HF520_06500 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HF520_09545 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HF520_04760 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D HF520_13620 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D HF520_12770 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D HF520_13625 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D HF520_04770 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D HF520_05675 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D HF520_09555 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HF520_04750 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HF520_04890 undecaprenyl diphosphate synthase family protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:roc00906]
D HF520_04900 crtI; phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D HF520_08765 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HF520_14355 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HF520_14360 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D HF520_06995 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 01054 Nonribosomal peptide structures [PATH:roc01054]
D HF520_10155 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D HF520_09305 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:roc00946]
D HF520_00675 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HF520_04315 glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:roc00332]
D HF520_03550 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HF520_03555 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:roc00261]
D HF520_09305 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D HF520_06785 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HF520_08850 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HF520_15060 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HF520_00100 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HF520_15055 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HF520_15050 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:roc00521]
D HF520_09265 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D HF520_05080 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_10725 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HF520_06995 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D HF520_09265 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D HF520_06995 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00401 Novobiocin biosynthesis [PATH:roc00401]
D HF520_02070 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D HF520_08595 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_13955 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_06835 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D HF520_05880 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HF520_04415 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HF520_05630 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HF520_05875 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D HF520_02600 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D HF520_05890 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:roc00999]
D HF520_03725 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HF520_12455 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HF520_09420 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D HF520_00675 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D HF520_04315 glycoside hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D HF520_00405 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D HF520_00400 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D HF520_00395 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:roc00625]
D HF520_11650 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HF520_07975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D HF520_04235 AAA family ATPase K02588 nifH; nitrogenase iron protein NifH
D HF520_05150 noncanonical pyrimidine nucleotidase, YjjG family K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D HF520_05150 noncanonical pyrimidine nucleotidase, YjjG family K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D HF520_11320 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
D HF520_04200 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D HF520_04195 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D HF520_04190 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:roc00626]
D HF520_11650 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:roc03020]
D HF520_13710 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HF520_13715 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HF520_13890 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HF520_09790 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:roc03010]
D HF520_02240 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D HF520_04725 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HF520_13775 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HF520_11060 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HF520_13885 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HF520_13830 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HF520_13120 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HF520_13725 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HF520_13815 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HF520_13925 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HF520_13740 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HF520_13880 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HF520_13720 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HF520_13875 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HF520_13810 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HF520_08880 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HF520_09345 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HF520_13790 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HF520_13110 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HF520_13765 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HF520_03140 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HF520_03215 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HF520_13695 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HF520_13760 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HF520_13745 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HF520_13750 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HF520_13805 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HF520_13820 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HF520_13705 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HF520_13090 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HF520_13700 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HF520_13690 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HF520_13920 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HF520_13795 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HF520_13840 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HF520_13780 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HF520_13895 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HF520_13825 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HF520_09325 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HF520_11410 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HF520_02950 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HF520_13770 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HF520_13755 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HF520_13800 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HF520_00445 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D HF520_07070 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D HF520_02960 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HF520_09715 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HF520_13785 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HF520_13835 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HF520_14230 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HF520_09630 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HF520_13675 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HF520_13205 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HF520_11415 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HF520_13870 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HF520_11765 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HF520_12565 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HF520_14390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HF520_11805 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:roc00970]
D HF520_02440 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HF520_12560 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HF520_13295 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HF520_13940 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HF520_13975 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HF520_14005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HF520_13555 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HF520_12515 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HF520_12625 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HF520_13430 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HF520_13505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HF520_12645 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HF520_12650 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HF520_13410 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HF520_13480 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HF520_12525 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HF520_12655 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HF520_13035 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HF520_13405 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HF520_13475 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HF520_08125 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HF520_13445 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HF520_13550 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HF520_12620 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HF520_13435 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HF520_13510 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HF520_12535 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HF520_12670 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HF520_13045 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HF520_13390 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HF520_13460 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HF520_02450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_11735 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_11755 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_12630 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_12665 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_13395 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_13465 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_12520 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_13500 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_13540 tRNA-His K14226 tRNA-His; tRNA His
D HF520_12580 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HF520_13425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_13495 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_12545 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_13280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_13380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_13450 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_13990 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_12615 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HF520_13050 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HF520_13440 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HF520_13545 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HF520_12540 tRNA-Met K14230 tRNA-Met; tRNA Met
D HF520_12570 tRNA-Met K14230 tRNA-Met; tRNA Met
D HF520_12595 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HF520_13285 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HF520_13385 tRNA-Met K14230 tRNA-Met; tRNA Met
D HF520_13455 tRNA-Met K14230 tRNA-Met; tRNA Met
D HF520_13525 tRNA-Met K14230 tRNA-Met; tRNA Met
D HF520_13530 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HF520_13995 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HF520_12575 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HF520_13520 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HF520_12585 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HF520_12600 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HF520_13535 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HF520_12610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HF520_13515 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HF520_11225 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HF520_12605 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HF520_10770 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HF520_12640 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HF520_13030 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HF520_13415 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HF520_13485 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HF520_12590 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HF520_12635 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HF520_13420 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HF520_13490 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HF520_12530 tRNA-Val K14237 tRNA-Val; tRNA Val
D HF520_12660 tRNA-Val K14237 tRNA-Val; tRNA Val
D HF520_13040 tRNA-Val K14237 tRNA-Val; tRNA Val
D HF520_13400 tRNA-Val K14237 tRNA-Val; tRNA Val
D HF520_13470 tRNA-Val K14237 tRNA-Val; tRNA Val
D HF520_13560 tRNA-Val K14237 tRNA-Val; tRNA Val
D HF520_03100 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D HF520_13635 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HF520_06815 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HF520_03815 alanyl-tRNA editing protein AlaX-L K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HF520_09240 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HF520_10860 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HF520_03660 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HF520_03285 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HF520_03290 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HF520_11430 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HF520_13315 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HF520_03060 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D HF520_13645 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HF520_14080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HF520_09770 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HF520_14915 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HF520_03010 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HF520_09905 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HF520_12695 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HF520_11350 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HF520_13630 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HF520_10865 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HF520_11390 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HF520_11385 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HF520_04595 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HF520_09870 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:roc03060]
D HF520_13845 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HF520_13680 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HF520_00150 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HF520_10925 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HF520_13190 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HF520_12435 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HF520_09350 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HF520_09360 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HF520_08360 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D HF520_11535 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HF520_11540 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HF520_09850 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HF520_01050 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:roc04122]
D HF520_09255 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HF520_11185 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HF520_09245 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HF520_07330 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HF520_09885 sulfurtransferase K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11]
D HF520_07325 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HF520_07335 MogA/MoaB family molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HF520_11180 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:roc03018]
D HF520_00045 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00115 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_08870 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HF520_00160 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HF520_02030 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HF520_03785 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HF520_11155 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HF520_07390 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HF520_14225 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HF520_08795 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HF520_02195 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HF520_09205 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HF520_14525 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HF520_03185 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HF520_12285 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HF520_05815 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:roc03030]
D HF520_03380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HF520_14520 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HF520_08930 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HF520_13335 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HF520_14035 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HF520_03135 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HF520_13215 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HF520_10550 AAA family ATPase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HF520_13085 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HF520_07870 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HF520_02130 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HF520_13115 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HF520_09310 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HF520_02795 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HF520_14660 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:roc03410]
D HF520_12300 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D HF520_11485 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HF520_03090 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HF520_04845 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D HF520_08585 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HF520_11510 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HF520_02795 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HF520_10895 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HF520_14660 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:roc03420]
D HF520_14155 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HF520_14445 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D HF520_14440 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D HF520_06190 GIY-YIG nuclease family protein K03703 uvrC; excinuclease ABC subunit C
D HF520_14450 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D HF520_02475 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HF520_11195 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HF520_11685 DUF3553 domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HF520_02795 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HF520_14660 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:roc03430]
D HF520_05830 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HF520_05495 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D HF520_11360 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D HF520_05825 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D HF520_02475 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HF520_11195 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HF520_11685 DUF3553 domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HF520_09565 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HF520_09560 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HF520_10895 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HF520_02130 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HF520_13115 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HF520_14520 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HF520_08930 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HF520_13215 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HF520_13335 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HF520_03135 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HF520_14035 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HF520_03380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HF520_14660 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:roc03440]
D HF520_10895 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HF520_02130 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HF520_13115 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HF520_13225 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HF520_03275 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HF520_13345 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HF520_08800 recA; recombinase RecA K03553 recA; recombination protein RecA
D HF520_02795 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HF520_10950 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HF520_10945 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HF520_10955 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HF520_09030 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HF520_09700 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HF520_12450 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HF520_14520 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HF520_08930 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HF520_13215 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HF520_13335 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HF520_03135 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HF520_14035 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HF520_03380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HF520_09780 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:roc02010]
D HF520_05050 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D HF520_05055 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D HF520_05060 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HF520_02425 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HF520_12920 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HF520_02420 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D HF520_02415 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D HF520_02410 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HF520_00785 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D HF520_00790 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D HF520_07750 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HF520_04500 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_06870 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_07120 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_10335 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_11460 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_11465 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_12225 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_06860 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D HF520_11450 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D HF520_06855 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D HF520_11445 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D HF520_06865 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HF520_11455 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HF520_02020 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D HF520_02015 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D HF520_02010 rbsA; ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HF520_02005 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D HF520_14870 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HF520_14875 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D HF520_14880 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D HF520_14885 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HF520_08250 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D HF520_08245 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D HF520_08240 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D HF520_04835 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D HF520_05800 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D HF520_11205 methionine-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D HF520_04830 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D HF520_04825 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HF520_05900 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HF520_05920 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D HF520_05915 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D HF520_05910 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HF520_05905 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HF520_08495 zinc ABC transporter solute-binding protein K09815 znuA; zinc transport system substrate-binding protein
D HF520_08485 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D HF520_08490 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HF520_01910 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D HF520_01905 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D HF520_11720 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D HF520_11715 ATP-binding cassette domain-containing protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HF520_05135 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D HF520_02320 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D HF520_13910 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D HF520_13900 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HF520_13905 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HF520_04935 CPBP family intramembrane metalloprotease K09696 natB; sodium transport system permease protein
D HF520_04930 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D HF520_03370 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D HF520_03365 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HF520_10310 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HF520_01940 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HF520_06955 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HF520_06950 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HF520_10305 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HF520_01945 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HF520_08325 abc-f; ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:roc02060]
D HF520_10350 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HF520_10355 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D HF520_10170 PTS transporter subunit EIIC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D HF520_11840 PTS lactose/cellobiose transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D HF520_11835 PTS transporter subunit EIIC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D HF520_05950 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HF520_05945 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D HF520_00815 PTS sugar transporter subunit IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D HF520_00820 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D HF520_00825 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D HF520_00830 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D HF520_14410 PTS sugar transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D HF520_14415 agaB; PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D HF520_14420 PTS sugar transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D HF520_14425 PTS system mannose/fructose/sorbose family transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D HF520_00300 PTS transporter subunit EIIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HF520_00305 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HF520_00310 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D HF520_02025 PTS sugar transporter subunit IIBC K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
C 03070 Bacterial secretion system [PATH:roc03070]
D HF520_13680 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HF520_00150 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HF520_13845 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HF520_10925 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HF520_13190 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HF520_12435 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HF520_09360 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HF520_09350 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:roc02020]
D HF520_09995 cell wall metabolism sensor histidine kinase WalK K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HF520_10000 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D HF520_14870 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HF520_00590 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D HF520_00595 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D HF520_00575 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D HF520_00580 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D HF520_00585 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D HF520_01915 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D HF520_13210 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HF520_00195 HAMP domain-containing histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D HF520_00190 response regulator transcription factor K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D HF520_00200 ABC transporter ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D HF520_00205 ABC transporter permease K11636 yxdM; putative ABC transport system permease protein
D HF520_01800 GHKL domain-containing protein K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HF520_07425 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HF520_07430 response regulator transcription factor K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D HF520_07225 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D HF520_07230 response regulator transcription factor K18344 vanRB; two-component system, OmpR family, response regulator VanR
D HF520_01475 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D HF520_01470 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
D HF520_06935 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D HF520_09525 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D HF520_00370 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D HF520_00355 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D HF520_00360 HpcH/HpaI aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D HF520_00365 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D HF520_00375 citG; triphosphoribosyl-dephospho-CoA synthase CitG K13927 citXG; holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase [EC:2.7.7.61 2.4.2.52]
D HF520_06085 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D HF520_04930 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D HF520_04935 CPBP family intramembrane metalloprotease K09696 natB; sodium transport system permease protein
D HF520_05190 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D HF520_10840 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D HF520_05195 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D HF520_10320 DUF4097 domain-containing protein K11621 liaG; lia operon protein LiaG
D HF520_08570 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HF520_00015 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D HF520_11935 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D HF520_14725 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D HF520_01755 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HF520_11520 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D HF520_01875 helix-turn-helix transcriptional regulator K07720 yesN; two-component system, response regulator YesN
D HF520_06650 helix-turn-helix transcriptional regulator K07720 yesN; two-component system, response regulator YesN
D HF520_07590 response regulator K07720 yesN; two-component system, response regulator YesN
D HF520_08270 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:roc02024]
D HF520_12875 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HF520_05815 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HF520_00595 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D HF520_14955 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D HF520_14965 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D HF520_14960 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D HF520_14970 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D HF520_01755 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HF520_00860 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HF520_08080 EamA family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D HF520_05190 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D HF520_10840 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D HF520_05195 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D HF520_01800 GHKL domain-containing protein K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HF520_07425 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HF520_07430 response regulator transcription factor K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D HF520_05900 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HF520_05920 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D HF520_05915 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D HF520_05910 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HF520_05905 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HF520_01665 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HF520_11710 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HF520_01670 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HF520_11705 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HF520_01675 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HF520_11700 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HF520_01680 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HF520_11695 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HF520_11690 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HF520_01685 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HF520_13190 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HF520_13680 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HF520_00150 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HF520_13845 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HF520_10925 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HF520_12435 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HF520_09360 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HF520_09350 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HF520_09525 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D HF520_11080 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
D HF520_06935 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D HF520_02020 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:roc02040]
D HF520_04535 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D HF520_07865 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HF520_00015 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HF520_00045 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00115 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D HF520_12865 dihydropteroate synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:roc01501]
D HF520_01525 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HF520_03905 glycosyl hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HF520_07670 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HF520_05900 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HF520_05920 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D HF520_05915 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D HF520_05910 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HF520_05905 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HF520_11105 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HF520_02900 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HF520_09440 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:roc01502]
D HF520_07225 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D HF520_07230 response regulator transcription factor K18344 vanRB; two-component system, OmpR family, response regulator VanR
D HF520_08130 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HF520_12750 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HF520_14340 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HF520_10085 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HF520_10080 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HF520_10065 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:roc01503]
D HF520_04775 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_05225 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_09045 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_10380 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_10525 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_11085 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_13930 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_14615 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_14620 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:roc01000]
C 01001 Protein kinases [BR:roc01001]
D HF520_03390 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HF520_09740 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HF520_13255 histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D HF520_10735 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D HF520_09995 cell wall metabolism sensor histidine kinase WalK K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HF520_00590 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D HF520_00195 HAMP domain-containing histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D HF520_01800 GHKL domain-containing protein K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HF520_07425 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HF520_07225 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D HF520_01475 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D HF520_05195 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D HF520_07595 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:roc01009]
D HF520_14525 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HF520_12165 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D HF520_09745 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:roc01002]
D HF520_09850 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HF520_11890 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HF520_03145 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D HF520_10030 sigma-E processing peptidase SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D HF520_01640 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D HF520_12230 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HF520_02290 SH3 domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HF520_12365 SH3 domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HF520_12200 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HF520_12495 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HF520_09830 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D HF520_07105 choloylglycine hydrolase family protein K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D HF520_03520 class D sortase K07284 srtA; sortase A [EC:3.4.22.70]
D HF520_10570 class D sortase K07284 srtA; sortase A [EC:3.4.22.70]
D HF520_10765 srtB; class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D HF520_05190 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D HF520_10840 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D HF520_07080 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D HF520_14215 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D HF520_14855 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D HF520_07250 insulinase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D HF520_07965 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D HF520_02520 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D HF520_14105 M20/M25/M40 family metallo-hydrolase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D HF520_05480 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HF520_11365 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HF520_15070 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D HF520_07200 methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HF520_13855 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HF520_02375 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HF520_12855 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D HF520_10100 beta-aspartyl-peptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D HF520_04965 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HF520_11425 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HF520_12730 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HF520_08545 M42 family metallopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D HF520_04765 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D HF520_11555 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-]
D HF520_03360 S8 family peptidase K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D HF520_03045 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HF520_04720 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HF520_09185 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HF520_14680 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HF520_14690 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D HF520_05735 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D HF520_11535 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HF520_11540 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HF520_01050 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D HF520_14380 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D HF520_09530 peptidase S55 K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D HF520_08410 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D HF520_07205 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D HF520_09450 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D HF520_11375 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:roc01003]
D HF520_08555 galactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D HF520_13355 glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D HF520_04155 glycosyltransferase K00752 hasA; hyaluronan synthase [EC:2.4.1.212]
D HF520_02115 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D HF520_11105 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HF520_09500 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HF520_10460 glycosyltransferase family 2 protein K16698 tuaG; teichuronic acid biosynthesis glycosyltransferase TuaG [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:roc01005]
D HF520_08505 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D HF520_09500 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:roc01011]
D HF520_10060 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HF520_12485 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HF520_14490 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HF520_14115 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HF520_10075 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HF520_04580 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HF520_10150 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HF520_08130 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HF520_12750 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HF520_14340 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HF520_12745 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HF520_08410 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D HF520_10080 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HF520_10065 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HF520_00185 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HF520_08655 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HF520_10440 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D HF520_11105 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HF520_02900 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HF520_09440 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HF520_10090 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D HF520_04875 penicillin-binding transpeptidase domain-containing protein K21467 pbpC; penicillin-binding protein 3
D HF520_03045 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HF520_04720 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HF520_09185 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HF520_02290 SH3 domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HF520_12365 SH3 domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HF520_03520 class D sortase K07284 srtA; sortase A [EC:3.4.22.70]
D HF520_10570 class D sortase K07284 srtA; sortase A [EC:3.4.22.70]
D HF520_10765 srtB; class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D HF520_02805 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HF520_09460 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D HF520_12480 spoIID; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D HF520_04775 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_05225 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_09045 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_10380 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_10525 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_11085 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_13930 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_14615 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_14620 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:roc01004]
D HF520_05880 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HF520_05895 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HF520_05870 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HF520_04415 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HF520_05630 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HF520_05875 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HF520_05860 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HF520_05885 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D HF520_07030 fadK; medium-chain fatty-acid--CoA ligase K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-]
D HF520_09625 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HF520_09965 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HF520_05125 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HF520_05670 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:roc01008]
D HF520_09305 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D HF520_10155 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:roc01006]
D HF520_09555 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HF520_04750 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HF520_04890 undecaprenyl diphosphate synthase family protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HF520_05820 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:roc01007]
D HF520_06815 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HF520_13635 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HF520_04595 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HF520_09870 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HF520_13645 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HF520_11350 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HF520_14080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HF520_09905 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HF520_14915 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HF520_03010 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HF520_12695 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HF520_10860 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HF520_03660 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HF520_10865 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HF520_03285 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HF520_03290 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HF520_13315 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HF520_13630 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HF520_11430 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HF520_03815 alanyl-tRNA editing protein AlaX-L K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HF520_09240 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HF520_11390 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HF520_11385 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HF520_08595 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_13955 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HF520_06835 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HF520_07195 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D HF520_01550 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HF520_06550 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HF520_06665 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HF520_12050 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HF520_05000 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:roc00194]
D HF520_14320 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HF520_14315 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HF520_14310 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HF520_14305 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HF520_14300 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HF520_14295 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HF520_14290 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HF520_14285 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:roc03000]
D HF520_08260 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D HF520_10300 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D HF520_12335 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D HF520_11845 DeoR/GlpR transcriptional regulator K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D HF520_12470 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D HF520_03295 helix-turn-helix transcriptional regulator K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D HF520_02635 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HF520_02390 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D HF520_01735 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D HF520_05955 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D HF520_09675 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D HF520_14060 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HF520_09160 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D HF520_11210 MerR family transcriptional regulator K19575 bmrR; MerR family transcriptional regulator, activator of bmr gene
D HF520_05405 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D HF520_09215 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D HF520_00645 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D HF520_01755 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HF520_01165 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D HF520_10340 yeiL; transcriptional regulator YeiL K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D HF520_09260 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D HF520_07410 winged helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D HF520_08375 winged helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D HF520_08380 helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D HF520_12090 helix-turn-helix transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D HF520_01030 winged helix-turn-helix transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D HF520_08540 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D HF520_04575 MarR family transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D HF520_12725 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HF520_14120 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D HF520_00810 sigma 54-interacting transcriptional regulator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D HF520_03975 sigma 54-interacting transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D HF520_10110 sigma 54-interacting transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D HF520_15020 sigma 54-interacting transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D HF520_00085 hypothetical protein K02647 cdaR; carbohydrate diacid regulator
D HF520_12380 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D HF520_09280 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D HF520_00950 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D HF520_01080 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D HF520_01405 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D HF520_14345 antitoxin K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D HF520_10175 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D HF520_00315 transcription antiterminator K03483 mtlR; mannitol operon transcriptional activator
D HF520_10825 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D HF520_06610 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D HF520_14165 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D HF520_13155 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HF520_13165 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HF520_00455 hypothetical protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D HF520_01575 transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D HF520_07875 transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D HF520_05560 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D HF520_03175 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D HF520_05240 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D HF520_00020 transcriptional regulator K05311 cggR; central glycolytic genes regulator
D HF520_09840 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D HF520_10010 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:roc03021]
D HF520_13890 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HF520_13710 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HF520_13715 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HF520_09790 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HF520_04535 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D HF520_07865 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HF520_03795 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HF520_04865 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HF520_09005 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HF520_14570 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HF520_07350 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HF520_13260 SigB/SigF/SigG family RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
D HF520_09435 sigK; RNA polymerase sporulation sigma factor SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D HF520_10020 sigG; RNA polymerase sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D HF520_10025 sigE; RNA polymerase sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D HF520_11135 RNA polymerase sporulation sigma factor, SigF/SigG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D HF520_13665 sigH; RNA polymerase sporulation sigma factor SigH K27000 sigH; RNA polymerase sigma-H factor
D HF520_00015 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D HF520_08920 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D HF520_09575 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HF520_13685 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HF520_13250 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D HF520_13255 histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D HF520_10820 SoxR reducing system RseC family protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D HF520_12700 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D HF520_14225 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:roc03019]
D HF520_02945 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D HF520_09375 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HF520_02195 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HF520_09205 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HF520_08795 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HF520_00160 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HF520_03965 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D HF520_02030 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HF520_03785 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HF520_11155 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HF520_07390 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HF520_00045 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00115 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_08870 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HF520_14225 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D HF520_14525 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HF520_03185 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HF520_12285 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HF520_05815 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HF520_14500 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:roc03011]
D HF520_02240 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D HF520_04725 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HF520_13775 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HF520_11060 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HF520_13885 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HF520_13830 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HF520_13120 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HF520_13725 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HF520_13815 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HF520_13925 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HF520_13740 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HF520_13880 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HF520_13720 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HF520_13875 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HF520_13810 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HF520_08880 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HF520_09345 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HF520_13790 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HF520_13110 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HF520_13765 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HF520_03140 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HF520_03215 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HF520_13695 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HF520_13760 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HF520_13745 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HF520_13750 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HF520_13805 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HF520_13820 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HF520_13090 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HF520_13700 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HF520_13690 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HF520_13705 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HF520_13920 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HF520_13795 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HF520_13840 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HF520_13780 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HF520_13895 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HF520_13825 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HF520_09325 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HF520_11410 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HF520_02950 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HF520_13770 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HF520_13755 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HF520_13800 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HF520_02960 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HF520_09715 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HF520_13785 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HF520_13835 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HF520_14230 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HF520_09630 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HF520_13675 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HF520_13205 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HF520_11415 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HF520_13870 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HF520_00445 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D HF520_07070 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D HF520_11805 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HF520_11765 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HF520_12565 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HF520_14390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 03009 Ribosome biogenesis [BR:roc03009]
D HF520_09375 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HF520_09190 spore protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D HF520_03260 GTPase Era K03595 era; GTPase
D HF520_02965 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D HF520_08920 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D HF520_09575 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HF520_13685 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HF520_11595 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D HF520_14095 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HF520_09755 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D HF520_09695 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HF520_03200 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HF520_13170 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HF520_10115 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HF520_14050 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HF520_09540 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D HF520_14775 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D HF520_13655 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HF520_13000 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D HF520_12820 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D HF520_09750 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D HF520_11590 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D HF520_14535 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D HF520_06765 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D HF520_02540 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HF520_09845 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HF520_12815 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HF520_05255 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HF520_12400 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HF520_09335 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D HF520_08810 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D HF520_03195 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D HF520_02945 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D HF520_09225 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HF520_13650 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D HF520_02030 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HF520_03785 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HF520_11155 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HF520_09735 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HF520_09970 ribosome biogenesis GTPase Der K03977 engA; GTPase
D HF520_09320 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D HF520_11040 hflX; GTPase HflX K03665 hflX; GTPase
D HF520_14780 hflX; GTPase HflX K03665 hflX; GTPase
D HF520_14260 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HF520_10885 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HF520_08900 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D HF520_08925 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D HF520_13220 yaaA; S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein
D HF520_03005 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D HF520_03250 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D HF520_02970 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein
D HF520_01620 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D HF520_12440 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D HF520_10145 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D HF520_09635 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:roc03016]
D HF520_09190 spore protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D HF520_02980 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D HF520_09520 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D HF520_13630 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HF520_09905 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HF520_03010 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HF520_14080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HF520_06815 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HF520_11350 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HF520_12695 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HF520_10860 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HF520_03815 alanyl-tRNA editing protein AlaX-L K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HF520_09240 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HF520_03660 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HF520_11430 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HF520_13315 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HF520_13645 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HF520_14915 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HF520_10865 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HF520_11390 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HF520_11385 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HF520_04595 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HF520_09870 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HF520_10880 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D HF520_03210 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HF520_05705 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HF520_05975 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HF520_13915 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HF520_08890 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HF520_09255 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HF520_11185 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HF520_14260 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HF520_05820 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HF520_13180 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D HF520_13175 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HF520_03055 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D HF520_13200 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HF520_14665 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D HF520_03285 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HF520_03290 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HF520_13635 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HF520_02380 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D HF520_01110 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D HF520_04140 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D HF520_13320 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HF520_12705 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D HF520_05960 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D HF520_03205 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D HF520_09330 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HF520_07860 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D HF520_11475 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D HF520_11395 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D HF520_09245 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HF520_12880 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D HF520_02755 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein
D HF520_10940 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D HF520_11495 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D HF520_08815 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D HF520_10930 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HF520_11180 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HF520_12735 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HF520_12405 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D HF520_12395 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D HF520_12410 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HF520_03110 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D HF520_09645 nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D HF520_00160 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HF520_08870 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:roc03012]
D HF520_08905 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HF520_11420 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HF520_12385 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D HF520_04730 elongation factor Ts K02357 tsf; elongation factor Ts
D HF520_13670 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HF520_13735 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HF520_13595 elongation factor G K02355 fusA; elongation factor G
D HF520_13730 fusA; elongation factor G K02355 fusA; elongation factor G
D HF520_03065 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D HF520_14250 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HF520_04740 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D HF520_14245 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HF520_14150 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HF520_13865 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HF520_09385 efp; elongation factor P K02356 efp; elongation factor P
D HF520_12430 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:roc03110]
D HF520_05640 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D HF520_13600 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D HF520_14685 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D HF520_12165 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D HF520_03185 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HF520_12285 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HF520_03190 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HF520_01285 DnaJ domain-containing protein K05801 djlA; DnaJ like chaperone protein
D HF520_15085 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D HF520_03180 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D HF520_12170 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D HF520_12290 co-chaperone GroES K04078 groES; chaperonin GroES
D HF520_04965 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HF520_11425 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HF520_12730 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HF520_14285 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HF520_03360 S8 family peptidase K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D HF520_04950 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D HF520_11665 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D HF520_14160 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D HF520_08450 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D HF520_03475 thioredoxin family protein K03671 TXN; thioredoxin
D HF520_07420 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:roc04131]
D HF520_08360 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D HF520_00025 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HF520_00050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HF520_00110 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HF520_14530 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HF520_12165 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:roc03051]
D HF520_12165 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:roc03032]
D HF520_14180 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D HF520_13210 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HF520_10550 AAA family ATPase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HF520_13085 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HF520_01195 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D HF520_06415 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D HF520_09075 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D HF520_10605 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D HF520_13020 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D HF520_07870 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HF520_02130 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HF520_13115 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HF520_14520 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HF520_08930 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HF520_13215 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HF520_03135 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HF520_14035 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HF520_03380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HF520_13335 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HF520_09310 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HF520_02795 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HF520_14660 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HF520_13235 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HF520_13230 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HF520_09285 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HF520_03310 type IA DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D HF520_03560 DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:roc03036]
D HF520_09375 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HF520_14180 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D HF520_13210 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HF520_05815 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D HF520_14060 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HF520_09365 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D HF520_09175 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D HF520_09170 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D HF520_03365 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HF520_08820 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HF520_10095 hypothetical protein K03586 ftsL; cell division protein FtsL
D HF520_10055 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D HF520_10070 spoVE; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D HF520_03370 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D HF520_10035 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HF520_11380 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D HF520_04775 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_05225 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_09045 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_10380 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_10525 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_11085 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_13930 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_14615 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_14620 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HF520_02905 DUF342 domain-containing protein K03610 minC; septum site-determining protein MinC
D HF520_02910 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D HF520_02915 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D HF520_09910 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D HF520_09925 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D HF520_02885 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D HF520_12465 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HF520_02890 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D HF520_02895 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D HF520_02920 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D HF520_13160 ParA family protein K03496 parA; chromosome partitioning protein
D HF520_13155 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HF520_13165 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HF520_13175 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HF520_13170 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HF520_09480 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D HF520_14760 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D HF520_14175 mazG; nucleoside triphosphate pyrophosphohydrolase K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D HF520_14695 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
D HF520_14515 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:roc03400]
D HF520_06045 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D HF520_03090 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HF520_04845 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D HF520_12300 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D HF520_11485 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HF520_01835 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HF520_08585 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HF520_11510 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HF520_10895 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HF520_14660 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HF520_02795 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HF520_14445 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D HF520_14440 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D HF520_06190 GIY-YIG nuclease family protein K03703 uvrC; excinuclease ABC subunit C
D HF520_14450 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D HF520_02475 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HF520_11195 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HF520_11685 DUF3553 domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HF520_13710 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HF520_13715 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HF520_13890 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HF520_09790 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HF520_14155 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HF520_05830 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HF520_05495 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D HF520_11360 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D HF520_05825 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D HF520_09565 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HF520_09560 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HF520_14520 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HF520_08930 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HF520_13215 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HF520_03135 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HF520_14035 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HF520_03380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HF520_13335 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HF520_02130 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HF520_13115 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HF520_12450 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HF520_08800 recA; recombinase RecA K03553 recA; recombination protein RecA
D HF520_10950 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HF520_10945 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HF520_10955 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HF520_09780 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HF520_02500 AAA family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D HF520_02495 sbcD; exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D HF520_13605 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D HF520_13225 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HF520_09030 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HF520_09700 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HF520_03275 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HF520_13345 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HF520_09535 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D HF520_02490 addA; helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D HF520_02485 addB; helicase-exonuclease AddAB subunit AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D HF520_05375 cas1b; type I-B CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HF520_06405 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HF520_13235 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HF520_13230 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HF520_09285 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HF520_14180 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D HF520_09085 recombinase RecT K07455 recT; recombination protein RecT
D HF520_07390 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HF520_02225 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HF520_05735 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D HF520_02990 recX; recombination regulator RecX K03565 recX; regulatory protein
D HF520_08030 exonuclease K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D HF520_04790 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HF520_04905 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HF520_04910 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HF520_08895 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:roc03029]
D HF520_08905 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HF520_11420 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HF520_04730 elongation factor Ts K02357 tsf; elongation factor Ts
D HF520_13670 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HF520_13735 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HF520_13595 elongation factor G K02355 fusA; elongation factor G
D HF520_13730 fusA; elongation factor G K02355 fusA; elongation factor G
D HF520_09190 spore protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D HF520_03260 GTPase Era K03595 era; GTPase
D HF520_04595 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HF520_03010 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HF520_10860 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HF520_11350 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HF520_02130 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HF520_13115 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HF520_03185 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HF520_03180 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D HF520_12285 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HF520_12290 co-chaperone GroES K04078 groES; chaperonin GroES
D HF520_03190 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HF520_09255 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HF520_11185 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HF520_13190 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HF520_12165 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:roc02000]
D HF520_10310 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HF520_01940 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HF520_06955 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HF520_06950 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HF520_10305 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HF520_01945 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HF520_02735 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HF520_04515 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HF520_03450 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D HF520_08325 abc-f; ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D HF520_08310 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D HF520_05050 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D HF520_05055 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D HF520_05060 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HF520_02425 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HF520_12920 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HF520_02420 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D HF520_02415 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D HF520_02410 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HF520_14955 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D HF520_14965 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D HF520_14960 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D HF520_14970 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D HF520_00785 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D HF520_00790 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D HF520_02360 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D HF520_05460 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D HF520_02365 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D HF520_06720 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D HF520_02370 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D HF520_06715 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D HF520_07750 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HF520_11795 extracellular solute-binding protein K25086 musE; maltose transport system substrate-binding protein
D HF520_11790 sugar ABC transporter permease K25087 musF; maltose transport system permease protein
D HF520_11785 carbohydrate ABC transporter permease K25088 musG; maltose transport system permease protein
D HF520_02020 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D HF520_02015 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D HF520_02010 rbsA; ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HF520_04500 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_06870 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_07120 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_10335 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_11460 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_11465 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_12225 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D HF520_06860 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D HF520_11450 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D HF520_06855 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D HF520_11445 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D HF520_06865 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HF520_11455 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HF520_14870 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HF520_14875 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D HF520_14880 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D HF520_14885 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HF520_08250 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D HF520_08245 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D HF520_08240 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D HF520_04835 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D HF520_05800 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D HF520_11205 methionine-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D HF520_04830 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D HF520_04825 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HF520_04050 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D HF520_04055 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D HF520_04060 ATP-binding cassette domain-containing protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D HF520_05765 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HF520_05760 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D HF520_05755 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HF520_05900 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HF520_05920 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D HF520_05915 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D HF520_05910 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HF520_05905 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D HF520_01665 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HF520_11710 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HF520_01670 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HF520_11705 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HF520_01675 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HF520_11700 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HF520_01680 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HF520_11695 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HF520_11690 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HF520_01685 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D HF520_13075 ABC transporter substrate-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D HF520_13070 iron ABC transporter permease K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D HF520_13065 iron ABC transporter permease K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D HF520_13060 ABC transporter ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D HF520_04240 ABC transporter substrate-binding protein K25113 htsA; heme transport system substrate-binding protein
D HF520_03525 isdE; heme ABC transporter substrate-binding protein IsdE K25113 htsA; heme transport system substrate-binding protein
D HF520_04245 iron ABC transporter permease K25114 htsB; heme transport system permease protein
D HF520_03530 iron ABC transporter permease K25114 htsB; heme transport system permease protein
D HF520_04250 ABC transporter ATP-binding protein K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D HF520_03535 ABC transporter ATP-binding protein K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D HF520_02725 ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D HF520_02715 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein
D HF520_02710 ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein
D HF520_02720 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D HF520_08840 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HF520_08835 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D HF520_08625 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D HF520_08620 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D HF520_08615 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D HF520_08495 zinc ABC transporter solute-binding protein K09815 znuA; zinc transport system substrate-binding protein
D HF520_08485 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D HF520_08490 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HF520_01910 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D HF520_11720 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D HF520_01905 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D HF520_11715 ATP-binding cassette domain-containing protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HF520_05135 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D HF520_07455 ECF transporter S component K16923 qrtT; energy-coupling factor transport system substrate-specific component
D HF520_02310 ECF-type riboflavin transporter substrate-binding protein K16924 mtsT; energy-coupling factor transport system substrate-specific component
D HF520_02320 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D HF520_13910 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D HF520_13900 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HF520_13905 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HF520_02315 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HF520_04935 CPBP family intramembrane metalloprotease K09696 natB; sodium transport system permease protein
D HF520_04930 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D HF520_00760 ATP-binding cassette domain-containing protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D HF520_00755 ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D HF520_00205 ABC transporter permease K11636 yxdM; putative ABC transport system permease protein
D HF520_00200 ABC transporter ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D HF520_03370 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D HF520_03365 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HF520_00690 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D HF520_07175 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D HF520_00330 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HF520_00435 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HF520_00685 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HF520_04855 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HF520_07180 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HF520_00145 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HF520_02205 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HF520_04005 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HF520_07735 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D HF520_07805 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HF520_11575 DUF1430 domain-containing protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HF520_12975 DUF1430 domain-containing protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HF520_00140 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HF520_02200 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HF520_07655 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HF520_07730 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HF520_07810 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HF520_11580 putative bacteriocin export ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HF520_12970 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HF520_07695 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D HF520_08355 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D HF520_06130 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_12390 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_03990 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_04440 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_04970 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_13055 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_04335 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_11215 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_06210 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_11865 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_00905 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_01610 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_08635 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_11875 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_05300 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D HF520_07015 OFA family MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D HF520_12995 tetA(P); tetracycline efflux MFS transporter TetA(P) K18214 tetP_A; MFS transporter, DHA3 family, tetracycline resistance protein
D HF520_10350 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HF520_10355 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D HF520_10170 PTS transporter subunit EIIC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D HF520_02025 PTS sugar transporter subunit IIBC K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D HF520_11840 PTS lactose/cellobiose transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D HF520_11835 PTS transporter subunit EIIC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D HF520_05950 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HF520_05945 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D HF520_00815 PTS sugar transporter subunit IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D HF520_00820 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D HF520_00825 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D HF520_00830 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D HF520_14410 PTS sugar transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D HF520_14415 agaB; PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D HF520_14420 PTS sugar transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D HF520_14425 PTS system mannose/fructose/sorbose family transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D HF520_00300 PTS transporter subunit EIIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HF520_00305 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HF520_00310 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D HF520_06065 PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D HF520_14480 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D HF520_14485 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D HF520_07610 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D HF520_14845 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D HF520_03265 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D HF520_04205 acid-activated urea channel K03191 ureI; acid-activated urea channel
D HF520_05680 cation transporter K03284 corA; magnesium transporter
D HF520_06105 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D HF520_06880 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D HF520_02510 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HF520_03945 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HF520_04840 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HF520_07955 CidA/LrgA family protein K06518 cidA; holin-like protein
D HF520_07580 pduA; propanediol utilization microcompartment protein PduA K27260 pduA; bacterial microcompartment shell protein
D HF520_01505 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D HF520_14255 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D HF520_00995 hypothetical protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D HF520_04785 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein
D HF520_08080 EamA family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D HF520_00070 TRAP transporter large permease subunit K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D HF520_03935 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D HF520_09670 L-lactate permease K03303 lutP; lactate permease
D HF520_08315 BCCT family transporter K05020 opuD; glycine betaine transporter
D HF520_01750 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D HF520_11160 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D HF520_04485 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D HF520_04065 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D HF520_05185 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D HF520_12325 hypothetical protein K03312 gltS; glutamate:Na+ symporter, ESS family
D HF520_12930 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D HF520_07010 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D HF520_01555 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D HF520_08015 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D HF520_10105 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D HF520_04025 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D HF520_06925 sodium:proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D HF520_07140 sodium:proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D HF520_05625 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D HF520_05770 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D HF520_11405 Trk family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D HF520_05775 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D HF520_11400 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D HF520_09835 uracil-xanthine permease K02824 uraA; uracil permease
D HF520_15115 purine permease K24206 uacT; uric acid transporter
D HF520_12220 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D HF520_02780 chromate transporter K07240 chrA; chromate transporter
D HF520_02785 chromate transporter K07240 chrA; chromate transporter
D HF520_14860 chromate transporter K07240 chrA; chromate transporter
D HF520_14865 chromate transporter K07240 chrA; chromate transporter
D HF520_05610 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D HF520_05110 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D HF520_06050 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D HF520_14810 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D HF520_08360 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D HF520_03685 oligosaccharide flippase family protein K06409 spoVB; stage V sporulation protein B
D HF520_14170 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B
D HF520_10440 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D HF520_04645 AEC family transporter K24180 mleP; malate permease and related proteins
D HF520_00155 AEC family transporter K24180 mleP; malate permease and related proteins
D HF520_12415 ECF transporter S component K23675 fmnP; riboflavin transporter
D HF520_05245 thiT; energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter
D HF520_10070 spoVE; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D HF520_07765 manganese efflux pump K23242 mntP; manganese efflux pump family protein
D HF520_11065 manganese efflux pump K23242 mntP; manganese efflux pump family protein
D HF520_00405 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D HF520_00390 pyruvate carboxylase subunit B K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D HF520_00400 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D HF520_00395 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D HF520_10735 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D HF520_10740 hypothetical protein K19420 epsA; protein tyrosine kinase modulator
D HF520_04395 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D HF520_04400 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D HF520_04570 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D HF520_14830 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D HF520_04405 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D HF520_04565 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D HF520_14825 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D HF520_03225 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D HF520_08170 hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D HF520_14850 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:roc02044]
D HF520_11890 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HF520_11935 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D HF520_14725 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D HF520_11930 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D HF520_14715 type II/IV secretion system protein K02652 pilB; type IV pilus assembly protein PilB
D HF520_11925 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D HF520_14720 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D HF520_11920 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
D HF520_11895 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D HF520_14140 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D HF520_09920 YggT family protein K02221 yggT; YggT family protein
D HF520_03050 DUF655 domain-containing protein K02237 comEA; competence protein ComEA
D HF520_01860 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D HF520_03115 MBL fold metallo-hydrolase K02238 comEC; competence protein ComEC
D HF520_03130 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D HF520_12435 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HF520_13680 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HF520_00150 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HF520_13845 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HF520_09350 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HF520_09360 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HF520_10925 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HF520_13190 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:roc02042]
D HF520_00745 TDT family transporter K11041 eta; exfoliative toxin A/B
D HF520_02510 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HF520_03945 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HF520_04840 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HF520_01600 hemolysin III family protein K11068 hlyIII; hemolysin III
D HF520_12075 hemolysin III family protein K11068 hlyIII; hemolysin III
D HF520_11080 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:roc02022]
D HF520_09995 cell wall metabolism sensor histidine kinase WalK K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HF520_10000 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D HF520_00590 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D HF520_00595 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D HF520_01915 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D HF520_00195 HAMP domain-containing histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D HF520_00190 response regulator transcription factor K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D HF520_01800 GHKL domain-containing protein K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HF520_07425 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HF520_07430 response regulator transcription factor K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D HF520_07225 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D HF520_07230 response regulator transcription factor K18344 vanRB; two-component system, OmpR family, response regulator VanR
D HF520_01475 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D HF520_01470 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
D HF520_06935 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D HF520_04010 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D HF520_09525 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D HF520_05195 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D HF520_07595 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D HF520_01875 helix-turn-helix transcriptional regulator K07720 yesN; two-component system, response regulator YesN
D HF520_06650 helix-turn-helix transcriptional regulator K07720 yesN; two-component system, response regulator YesN
D HF520_07590 response regulator K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:roc02035]
D HF520_10755 hypothetical protein K02382 flbA; flagellar protein FlbA
D HF520_11895 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D HF520_14140 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D HF520_11935 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D HF520_14725 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D HF520_11930 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D HF520_14715 type II/IV secretion system protein K02652 pilB; type IV pilus assembly protein PilB
D HF520_11925 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D HF520_14720 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D HF520_11890 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HF520_11920 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:roc04812]
D HF520_02885 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D HF520_12465 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HF520_10035 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HF520_02905 DUF342 domain-containing protein K03610 minC; septum site-determining protein MinC
D HF520_02910 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D HF520_02915 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D HF520_13160 ParA family protein K03496 parA; chromosome partitioning protein
D HF520_13155 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HF520_13165 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:roc04147]
D HF520_12165 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D HF520_00045 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00115 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HF520_00025 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HF520_00030 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HF520_00050 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HF520_00110 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HF520_14530 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HF520_07965 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D HF520_12285 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HF520_03185 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HF520_14815 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HF520_12235 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HF520_13670 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HF520_13735 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D HF520_03210 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HF520_07185 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HF520_13850 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HF520_10890 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HF520_15125 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D HF520_02100 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HF520_05565 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HF520_08430 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HF520_08570 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HF520_11940 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HF520_02275 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HF520_12185 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HF520_11285 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HF520_00035 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HF520_08780 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:roc02048]
D HF520_05375 cas1b; type I-B CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HF520_06405 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HF520_05380 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D HF520_06400 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D HF520_05365 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D HF520_05350 cas8a1; type I-B CRISPR-associated protein Cas8b1/Cst1 K19088 cst1; CRISPR-associated protein Cst1
D HF520_05355 cas7i; type I-B CRISPR-associated protein Cas7/Cst2/DevR K19075 cst2; CRISPR-associated protein Cst2
D HF520_05370 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D HF520_05360 cas5b; type I-B CRISPR-associated protein Cas5 K19090 cas5t; CRISPR-associated protein Cas5t
D HF520_05345 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D HF520_06410 cas9; type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D HF520_06395 csn2; type II-A CRISPR-associated protein Csn2 K19137 csn2; CRISPR-associated protein Csn2
D HF520_06320 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HF520_06360 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HF520_06365 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HF520_10370 N-6 DNA methylase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D HF520_05275 AAA domain-containing protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D HF520_05280 McrC family protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D HF520_14350 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D HF520_14345 antitoxin K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D HF520_10035 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HF520_02885 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D HF520_12465 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HF520_14610 type III toxin-antitoxin system ToxN/AbiQ family toxin K19167 abiQ; protein AbiQ
D HF520_09255 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HF520_11185 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:roc01504]
D HF520_12995 tetA(P); tetracycline efflux MFS transporter TetA(P) K18214 tetP_A; MFS transporter, DHA3 family, tetracycline resistance protein
D HF520_03860 TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein K18220 tetM; ribosomal protection tetracycline resistance protein
D HF520_12990 tetB(P); tetracycline resistance ribosomal protection protein TetB(P) K18220 tetM; ribosomal protection tetracycline resistance protein
D HF520_08325 abc-f; ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D HF520_10660 acyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D HF520_07225 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D HF520_07230 response regulator transcription factor K18344 vanRB; two-component system, OmpR family, response regulator VanR
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:roc00537]
D HF520_07965 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:roc03100]
D HF520_02440 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HF520_12560 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HF520_13295 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HF520_13940 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HF520_13975 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HF520_14005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HF520_13555 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HF520_12515 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HF520_12625 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HF520_13430 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HF520_13505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HF520_12645 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HF520_12650 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HF520_13410 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HF520_13480 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HF520_12525 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HF520_12655 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HF520_13035 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HF520_13405 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HF520_13475 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HF520_08125 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HF520_13445 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HF520_13550 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HF520_12620 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HF520_13435 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HF520_13510 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HF520_12535 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HF520_12670 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HF520_13045 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HF520_13390 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HF520_13460 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HF520_02450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_11735 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_11755 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_12630 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_12665 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_13395 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_13465 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_12520 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_13500 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HF520_13540 tRNA-His K14226 tRNA-His; tRNA His
D HF520_12580 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HF520_13425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_13495 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_12545 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_13280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_13380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_13450 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_13990 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HF520_12615 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HF520_13050 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HF520_13440 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HF520_13545 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HF520_12540 tRNA-Met K14230 tRNA-Met; tRNA Met
D HF520_12570 tRNA-Met K14230 tRNA-Met; tRNA Met
D HF520_12595 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HF520_13285 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HF520_13385 tRNA-Met K14230 tRNA-Met; tRNA Met
D HF520_13455 tRNA-Met K14230 tRNA-Met; tRNA Met
D HF520_13525 tRNA-Met K14230 tRNA-Met; tRNA Met
D HF520_13530 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HF520_13995 tRNA-Ile K14230 tRNA-Met; tRNA Met
D HF520_12575 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HF520_13520 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HF520_12585 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HF520_12600 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HF520_13535 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HF520_12610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HF520_13515 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HF520_11225 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HF520_12605 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HF520_10770 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HF520_12640 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HF520_13030 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HF520_13415 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HF520_13485 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HF520_12590 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HF520_12635 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HF520_13420 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HF520_13490 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HF520_12530 tRNA-Val K14237 tRNA-Val; tRNA Val
D HF520_12660 tRNA-Val K14237 tRNA-Val; tRNA Val
D HF520_13040 tRNA-Val K14237 tRNA-Val; tRNA Val
D HF520_13400 tRNA-Val K14237 tRNA-Val; tRNA Val
D HF520_13470 tRNA-Val K14237 tRNA-Val; tRNA Val
D HF520_13560 tRNA-Val K14237 tRNA-Val; tRNA Val
D HF520_03100 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D HF520_11765 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HF520_12565 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HF520_14390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HF520_11805 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HF520_01410 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D HF520_07130 2Fe-2S iron-sulfur cluster binding domain-containing protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D HF520_03415 iorA; indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D HF520_03420 indolepyruvate oxidoreductase subunit beta K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D HF520_00005 xdh; selenium-dependent xanthine dehydrogenase K07469 mop; aldehyde oxidoreductase [EC:1.2.99.7]
D HF520_07675 NAD/NADP octopine/nopaline dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D HF520_02930 FprA family A-type flavoprotein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D HF520_07705 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D HF520_02975 CoA-disulfide reductase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D HF520_03845 msrA; peptide-methionine (S)-S-oxide reductase MsrA K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D HF520_04390 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HF520_00655 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D HF520_03830 4Fe-4S binding protein K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D HF520_08230 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D HF520_04345 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D HF520_01830 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D HF520_13965 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D HF520_01765 yjjW; YjjW family glycine radical enzyme activase K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HF520_11170 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HF520_06005 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D HF520_00700 GNAT family N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D HF520_12250 larB; nickel pincer cofactor biosynthesis protein LarB K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D HF520_10120 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HF520_07515 cob(I)yrinic acid a,c-diamide adenosyltransferase K27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-]
D HF520_03080 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HF520_09705 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D HF520_03300 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D HF520_13610 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D HF520_12510 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D HF520_01650 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D HF520_14950 CDP-alcohol phosphatidyltransferase family protein K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39]
D HF520_11140 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D HF520_14455 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D HF520_14210 spoIIE; stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D HF520_10125 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D HF520_13095 phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D HF520_14085 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HF520_14090 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D HF520_03850 hypothetical protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D HF520_15105 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D HF520_09775 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HF520_04170 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D HF520_07930 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D HF520_09855 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D HF520_08035 pdaA; delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D HF520_10785 polysaccharide deacetylase family protein K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D HF520_00010 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D HF520_03020 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D HF520_03700 uvsE; UV DNA damage repair endonuclease UvsE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D HF520_15095 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D HF520_06010 larE; ATP-dependent sacrificial sulfur transferase LarE K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D HF520_12240 LarC family nickel insertion protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D HF520_12245 larC; nickel pincer cofactor biosynthesis protein LarC K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D HF520_03610 eam; glutamate 2,3-aminomutase K19814 eam; glutamate 2,3-aminomutase [EC:5.4.3.9]
D HF520_10160 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D HF520_02850 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D HF520_02845 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D HF520_02870 Fe-S cluster domain-containing protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D HF520_02335 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D HF520_08685 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D HF520_08690 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D HF520_12085 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D HF520_02235 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D HF520_00835 SIS domain-containing protein K19504 gfrE; glucoselysine-6-phosphate deglycase
D HF520_00840 SIS domain-containing protein K19510 gfrF; fructoselysine-6-phosphate deglycase
D HF520_07555 diol dehydratase reactivase subunit alpha K27264 pduG; propanediol dehydratase-reactivating factor large subunit
D HF520_07550 glycerol dehydratase K27265 pduH; propanediol dehydratase-reactivating factor small subunit
C 99982 Energy metabolism
D HF520_14635 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D HF520_06160 ferredoxin K05337 fer; ferredoxin
D HF520_12895 ferredoxin K05337 fer; ferredoxin
D HF520_02855 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D HF520_02860 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D HF520_02865 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D HF520_09250 nifU; Fe-S cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D HF520_04255 oxalate:formate antiporter K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D HF520_04260 oxidoreductase K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
C 99983 Lipid metabolism
D HF520_09890 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D HF520_11470 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D HF520_04675 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D HF520_08875 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D HF520_07530 eutJ; ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ
D HF520_07630 eutP; EutP/PduV family microcompartment system protein K04029 eutP; ethanolamine utilization protein EutP
D HF520_07625 BMC domain-containing protein K04031 eutS; ethanolamine utilization protein EutS
D HF520_07635 BMC domain-containing protein K04031 eutS; ethanolamine utilization protein EutS
D HF520_15035 VOC family protein K08234 yaeR; glyoxylase I family protein
D HF520_09930 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D HF520_12755 cell wall hydrolase K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D HF520_10900 AarF/ABC1/UbiB kinase family protein K03688 ubiB; ubiquinone biosynthesis protein
D HF520_02705 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D HF520_08025 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
D HF520_07505 electron transport complex protein RnfC K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HF520_00770 cold-shock protein K03704 cspA; cold shock protein
D HF520_00930 cold-shock protein K03704 cspA; cold shock protein
D HF520_00945 cold-shock protein K03704 cspA; cold shock protein
D HF520_01000 cold-shock protein K03704 cspA; cold shock protein
D HF520_01570 cold-shock protein K03704 cspA; cold shock protein
D HF520_06600 cold-shock protein K03704 cspA; cold shock protein
D HF520_06850 cold shock domain-containing protein K03704 cspA; cold shock protein
D HF520_07615 cold-shock protein K03704 cspA; cold shock protein
D HF520_08465 cold-shock protein K03704 cspA; cold shock protein
D HF520_12935 cold-shock protein K03704 cspA; cold shock protein
D HF520_06430 phage antirepressor Ant K07741 antB; anti-repressor protein
D HF520_09100 phage repressor protein/antirepressor Ant K07741 antB; anti-repressor protein
D HF520_12425 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D HF520_14675 trigger factor K03545 tig; trigger factor
D HF520_04210 urease accessory protein UreE K03187 ureE; urease accessory protein
D HF520_04215 urease accessory protein UreF K03188 ureF; urease accessory protein
D HF520_04220 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D HF520_04225 urease accessory protein UreD K03190 ureD; urease accessory protein
D HF520_00170 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D HF520_09295 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D HF520_07340 EF2563 family selenium-dependent molybdenum hydroxylase system protein K07402 xdhC; xanthine dehydrogenase accessory factor
D HF520_08255 xanthine dehydrogenase K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D HF520_08010 reverse transcriptase-like protein K06993 K06993; ribonuclease H-related protein
D HF520_02880 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D HF520_09300 YraN family protein K07460 yraN; putative endonuclease
D HF520_06155 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D HF520_09290 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D HF520_09275 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D HF520_00795 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D HF520_01430 IS256 family transposase K07493 K07493; putative transposase
D HF520_01715 IS256 family transposase K07493 K07493; putative transposase
D HF520_01890 IS256 family transposase K07493 K07493; putative transposase
D HF520_05205 IS256 family transposase K07493 K07493; putative transposase
D HF520_05385 IS256 family transposase K07493 K07493; putative transposase
D HF520_05500 IS256 family transposase K07493 K07493; putative transposase
D HF520_06205 IS256 family transposase K07493 K07493; putative transposase
D HF520_06450 IS256 family transposase K07493 K07493; putative transposase
D HF520_06495 IS256 family transposase K07493 K07493; putative transposase
D HF520_08700 IS256 family transposase K07493 K07493; putative transposase
D HF520_12080 IS256 family transposase K07493 K07493; putative transposase
D HF520_00725 IS3 family transposase K07497 K07497; putative transposase
D HF520_05615 IS3 family transposase K07497 K07497; putative transposase
D HF520_08845 IS3 family transposase K07497 K07497; putative transposase
D HF520_12965 IS6 family transposase K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D HF520_06035 PspA/IM30 family protein K03969 pspA; phage shock protein A
D HF520_13340 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HF520_01055 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HF520_01520 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HF520_01880 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HF520_10990 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HF520_10995 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HF520_01340 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HF520_02330 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HF520_03165 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HF520_06545 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HF520_14700 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HF520_00345 TRAP transporter large permease subunit K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D HF520_03545 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HF520_03980 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HF520_07395 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HF520_09315 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D HF520_10275 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D HF520_03925 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D HF520_04615 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D HF520_02355 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D HF520_11280 AAA family ATPase K07321 cooC; CO dehydrogenase maturation factor
D HF520_11315 AAA family ATPase K07321 cooC; CO dehydrogenase maturation factor
D HF520_00855 spore coat protein CotH K06330 cotH; spore coat protein H
D HF520_03335 spore coat protein CotJB K06333 cotJB; spore coat protein JB
D HF520_03330 manganese catalase family protein K06334 cotJC; spore coat protein JC
D HF520_13185 protein jag K06346 jag; spoIIIJ-associated protein
D HF520_05585 biotin-dependent carboxyltransferase family protein K06350 kipA; antagonist of KipI
D HF520_05580 pxpB; 5-oxoprolinase subunit PxpB K06351 kipI; inhibitor of KinA
D HF520_14070 spore maturation protein K06373 spmA; spore maturation protein A
D HF520_14075 spore maturation protein K06374 spmB; spore maturation protein B
D HF520_11145 spoIIAA; anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D HF520_03150 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D HF520_12760 spoIIR; stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D HF520_09620 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D HF520_09615 stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D HF520_09610 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D HF520_09605 spoIIIAD; stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D HF520_09600 spoIIIAE; stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D HF520_09595 spoIIIAF; stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D HF520_09590 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D HF520_09585 SpoIIIAH-like family protein K06397 spoIIIAH; stage III sporulation protein AH
D HF520_09955 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D HF520_00280 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D HF520_09120 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D HF520_14540 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D HF520_14545 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D HF520_11130 hypothetical protein K06403 spoVAA; stage V sporulation protein AA
D HF520_11125 stage V sporulation protein AC K06404 spoVAB; stage V sporulation protein AB
D HF520_11120 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D HF520_11115 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D HF520_11110 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D HF520_14125 spoVG; septation regulator SpoVG K06412 spoVG; stage V sporulation protein G
D HF520_05720 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D HF520_10245 alpha/beta-type small acid-soluble spore protein K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP)
D HF520_14990 alpha/beta-type small acid-soluble spore protein K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP)
D HF520_05155 small acid-soluble spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D HF520_12785 yabG; sporulation peptidase YabG K06436 yabG; spore coat assemly protein
D HF520_03240 yqfD; sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein
C 99993 Cell motility
C 99995 Signaling proteins
D HF520_04435 carbon starvation protein A K06200 cstA; carbon starvation protein
D HF520_06090 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D HF520_09950 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D HF520_03245 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D HF520_05535 1,4-beta-N-acetylmuramidase K07273 acm; lysozyme
D HF520_07725 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D HF520_07575 pduB; propanediol utilization microcompartment protein PduB K27263 pduB; bacterial microcompartment shell protein
D HF520_07540 pduA; propanediol utilization microcompartment protein PduA K27266 pduJ; bacterial microcompartment shell protein
D HF520_07545 BMC domain-containing protein K27267 pduK; bacterial microcompartment shell protein
D HF520_07495 BMC domain-containing protein K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D HF520_14890 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D HF520_05505 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D HF520_02085 helix-turn-helix transcriptional regulator K07219 K07219; putative molybdopterin biosynthesis protein
D HF520_01035 SdpI family protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HF520_04585 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D HF520_02245 phosphatase K04477 ycdX; putative hydrolase
D HF520_14495 PHP domain-containing protein K04477 ycdX; putative hydrolase
D HF520_04980 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D HF520_10360 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D HF520_05700 Fe-S cluster assembly protein HesB K15724 erpA; iron-sulfur cluster insertion protein
D HF520_10325 Fe-S cluster assembly protein HesB K15724 erpA; iron-sulfur cluster insertion protein
D HF520_04275 hypothetical protein K07038 K07038; inner membrane protein
D HF520_07600 metal-dependent hydrolase K07038 K07038; inner membrane protein
D HF520_09210 metal-dependent hydrolase K07038 K07038; inner membrane protein
D HF520_05085 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D HF520_04465 LemA family protein K03744 lemA; LemA protein
D HF520_06940 hypothetical protein K01421 yhgE; putative membrane protein
D HF520_10540 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D HF520_12915 alkylphosphonate utilization protein K06193 phnA; protein PhnA
C 99997 Function unknown
D HF520_10910 scfB; thioether cross-link-forming SCIFF peptide maturase K06871 K06871; uncharacterized protein
D HF520_06885 HD domain-containing protein K06885 K06885; uncharacterized protein
D HF520_06845 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D HF520_08225 hypothetical protein K06890 K06890; uncharacterized protein
D HF520_02170 DUF134 domain-containing protein K06933 K06933; uncharacterized protein
D HF520_05540 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D HF520_07060 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D HF520_06185 HD domain-containing protein K06950 K06950; uncharacterized protein
D HF520_05070 cation:dicarboxylase symporter family transporter K06956 K06956; uncharacterized protein
D HF520_09340 KH domain-containing protein K06960 K06960; uncharacterized protein
D HF520_13660 NYN domain-containing protein K06962 K06962; uncharacterized protein
D HF520_09760 zinc metallopeptidase K06973 K06973; uncharacterized protein
D HF520_08060 GNAT family N-acetyltransferase K06976 K06976; uncharacterized protein
D HF520_09270 GNAT family N-acetyltransferase K06976 K06976; uncharacterized protein
D HF520_06945 MMPL family transporter K07003 K07003; uncharacterized protein
D HF520_04495 hypothetical protein K07005 K07005; uncharacterized protein
D HF520_04945 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein
D HF520_05400 aldo/keto reductase K07079 K07079; uncharacterized protein
D HF520_11505 aldo/keto reductase K07079 K07079; uncharacterized protein
D HF520_11010 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D HF520_11015 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D HF520_02525 yfcE; phosphodiesterase K07095 K07095; uncharacterized protein
D HF520_12130 metallophosphoesterase family protein K07095 K07095; uncharacterized protein
D HF520_12135 metallophosphoesterase family protein K07095 K07095; uncharacterized protein
D HF520_14670 metallophosphoesterase K07095 K07095; uncharacterized protein
D HF520_02745 metallophosphoesterase K07098 K07098; uncharacterized protein
D HF520_11620 serine/threonine protein phosphatase K07099 K07099; uncharacterized protein
D HF520_13310 transcription repressor NadR K07105 K07105; uncharacterized protein
D HF520_06110 sel1 repeat family protein K07126 K07126; uncharacterized protein
D HF520_14805 hypothetical protein K07137 K07137; uncharacterized protein
D HF520_08100 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D HF520_00120 hypothetical protein K07149 K07149; uncharacterized protein
D HF520_01720 hypothetical protein K07149 K07149; uncharacterized protein
D HF520_01980 hypothetical protein K07149 K07149; uncharacterized protein
D HF520_04600 hypothetical protein K07149 K07149; uncharacterized protein
D HF520_07770 YitT family protein K07149 K07149; uncharacterized protein
D HF520_10975 membrane protein K07149 K07149; uncharacterized protein
D HF520_06735 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D HF520_13195 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D HF520_03220 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D HF520_05140 DUF1284 domain-containing protein K09706 K09706; uncharacterized protein
D HF520_09765 DUF116 domain-containing protein K09729 K09729; uncharacterized protein
D HF520_09195 DUF503 domain-containing protein K09764 K09764; uncharacterized protein
D HF520_01985 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D HF520_09550 divergent PAP2 family protein K09775 K09775; uncharacterized protein
D HF520_03970 DUF378 domain-containing protein K09779 K09779; uncharacterized protein
D HF520_14020 DUF378 domain-containing protein K09779 K09779; uncharacterized protein
D HF520_09355 YlxM family DNA-binding protein K09787 K09787; uncharacterized protein
D HF520_03440 DUF454 domain-containing protein K09790 K09790; uncharacterized protein
D HF520_02385 DNA-binding protein K00243 K00243; uncharacterized protein
D HF520_05095 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D HF520_11610 hydrolase K05967 K05967; uncharacterized protein
D HF520_09985 spore envelope protein K05739 seaA; uncharacterized protein
D HF520_09990 hypothetical protein K05739 seaA; uncharacterized protein
D HF520_03120 DUF2156 domain-containing protein K01163 K01163; uncharacterized protein
D HF520_11200 hypothetical protein K07502 yprB; uncharacterized protein
D HF520_02955 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D HF520_08915 YlxR family protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 8, 2024