+D GENES KO
#
KEGG Orthology (KO) - Rubrobacter radiotolerans
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rrd00010]
D RradSPS_0182 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_0781 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_3047 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_3022 Phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RradSPS_1632 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RradSPS_1865 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RradSPS_1598 Fructose-16-bisphosphatase/sedoheptulose 1 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RradSPS_0410 Fructose-16-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RradSPS_3024 DhnA-type fructose-16-bisphosphate aldolase-related enzyme K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RradSPS_2457 cbbA: ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RradSPS_1112 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RradSPS_1781 tim: triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RradSPS_1783 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RradSPS_1782 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RradSPS_1228 Fructose-26-bisphosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RradSPS_0297 apgM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RradSPS_0799 eno: phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RradSPS_0800 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RradSPS_2983 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RradSPS_0481 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RradSPS_0482 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RradSPS_2476 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_0483 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_0579 Alpha/beta hydrolase family K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_1649 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_0395 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RradSPS_1982 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RradSPS_3060 Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RradSPS_2495 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RradSPS_0746 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RradSPS_1162 Transcriptional regulator/sugar kinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D RradSPS_2185 pckA: phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:rrd00020]
D RradSPS_1617 citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RradSPS_2228 Aconitase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RradSPS_1271 Isocitrate/isopropylmalate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D RradSPS_1858 Isocitrate/isopropylmalate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D RradSPS_0417 oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RradSPS_0418 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RradSPS_0395 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RradSPS_1251 sucCoAalpha: succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RradSPS_1252 sucCoAbeta: succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RradSPS_0013 Succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RradSPS_0014 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RradSPS_2192 hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RradSPS_2193 hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RradSPS_2283 Fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RradSPS_1262 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RradSPS_2187 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RradSPS_2185 pckA: phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RradSPS_0481 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RradSPS_0482 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RradSPS_2476 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_0483 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_0579 Alpha/beta hydrolase family K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_1649 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rrd00030]
D RradSPS_3022 Phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RradSPS_0062 zwf: glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RradSPS_0959 zwf: glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RradSPS_0064 pgl: 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D RradSPS_0061 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RradSPS_3040 rpe: ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RradSPS_1369 rpe: ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RradSPS_3020 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RradSPS_0058 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RradSPS_0060 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RradSPS_2154 rpiA: ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RradSPS_3031 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RradSPS_1512 deoC: deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RradSPS_0845 Sugar kinases ribokinase family K00852 rbsK; ribokinase [EC:2.7.1.15]
D RradSPS_2240 deoB: phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RradSPS_0787 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RradSPS_1616 Sugar (pentulose and hexulose) kinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D RradSPS_2264 Putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RradSPS_0410 Fructose-16-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RradSPS_3024 DhnA-type fructose-16-bisphosphate aldolase-related enzyme K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RradSPS_2457 cbbA: ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RradSPS_1112 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RradSPS_1598 Fructose-16-bisphosphatase/sedoheptulose 1 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RradSPS_1632 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RradSPS_1865 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rrd00040]
D RradSPS_0460 NDP-sugDHase: nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RradSPS_3026 Sugar (pentulose and hexulose) kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D RradSPS_2478 Sugar (pentulose and hexulose) kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D RradSPS_3040 rpe: ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RradSPS_1369 rpe: ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RradSPS_2189 Sugar (pentulose and hexulose) kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RradSPS_1073 Threonine dehydrogenase and related Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RradSPS_3017 Threonine dehydrogenase and related Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RradSPS_3027 Threonine dehydrogenase and related Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RradSPS_2466 Threonine dehydrogenase and related Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RradSPS_0315 NAD-dependent aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
C 00051 Fructose and mannose metabolism [PATH:rrd00051]
D RradSPS_0531 Sugar kinases ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RradSPS_2707 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RradSPS_1129 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RradSPS_1443 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D RradSPS_1564 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RradSPS_2450 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RradSPS_1632 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RradSPS_1865 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RradSPS_1598 Fructose-16-bisphosphatase/sedoheptulose 1 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RradSPS_0355 Mannitol-1-phosphate/altronate dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D RradSPS_0518 1-PFK: hexose kinase, 1-phosphofructokinase family K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RradSPS_1655 1-PFK: hexose kinase, 1-phosphofructokinase family K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RradSPS_1073 Threonine dehydrogenase and related Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RradSPS_3017 Threonine dehydrogenase and related Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RradSPS_3027 Threonine dehydrogenase and related Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RradSPS_2466 Threonine dehydrogenase and related Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RradSPS_0410 Fructose-16-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RradSPS_3024 DhnA-type fructose-16-bisphosphate aldolase-related enzyme K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RradSPS_2457 cbbA: ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RradSPS_1112 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RradSPS_1781 tim: triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RradSPS_3031 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RradSPS_1654 fruA: PTS system, fructose subfamily, IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D RradSPS_1653 PTS system, Fru family, IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RradSPS_0354 Mannitol/fructose-specific phosphotransferase system IIA domain K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D RradSPS_0352 mtlA: PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D RradSPS_1644 Phosphotransferase system sorbitol-specific component IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D RradSPS_1643 Phosphotransferase system sorbitol-specific component IIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D RradSPS_1642 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:rrd00052]
D RradSPS_1818 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RradSPS_1820 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RradSPS_2334 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RradSPS_0495 Nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RradSPS_1819 galE: UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RradSPS_0938 NAD dependent epimerase/dehydratase family K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RradSPS_0182 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_0781 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_3047 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_1823 Alpha-galactosidase/6-phospho-beta-glucosidase family 4 of glycosyl hydrolase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D RradSPS_1632 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RradSPS_1865 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RradSPS_1829 Glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RradSPS_0198 Glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RradSPS_1885 Alpha-glucosidase family 31 of glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:rrd00053]
D RradSPS_0460 NDP-sugDHase: nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RradSPS_3026 Sugar (pentulose and hexulose) kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D RradSPS_2478 Sugar (pentulose and hexulose) kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
C 00500 Starch and sucrose metabolism [PATH:rrd00500]
D RradSPS_1829 Glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RradSPS_0198 Glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RradSPS_1885 Alpha-glucosidase family 31 of glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RradSPS_1086 Alpha amylase, catalytic domain K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D RradSPS_1822 BGL: beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RradSPS_0193 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RradSPS_0173 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RradSPS_0192 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D RradSPS_0087 malQ: 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RradSPS_0191 protein of unknown function (DUF3416) K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D RradSPS_0194 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D RradSPS_0196 malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D RradSPS_0195 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D RradSPS_0264 Trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D RradSPS_3037 T6PP: trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D RradSPS_0265 T6PP: trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D RradSPS_2373 Glucoamylase and related glycosyl hydrolase K22934 E3.2.1.28; alpha,alpha-trehalase [EC:3.2.1.28]
D RradSPS_0182 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_0781 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_3047 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_3022 Phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RradSPS_0531 Sugar kinases ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rrd00520]
D RradSPS_1771 Beta-glucosidase-related glycosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RradSPS_2219 nagA: N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D RradSPS_0531 Sugar kinases ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RradSPS_0674 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RradSPS_1906 glmM: phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RradSPS_0786 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RradSPS_1577 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RradSPS_2449 murB: UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RradSPS_0182 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_0781 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_3047 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_1162 Transcriptional regulator/sugar kinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D RradSPS_0460 NDP-sugDHase: nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RradSPS_1272 NAD dependent epimerase/dehydratase family K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D RradSPS_1818 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RradSPS_1820 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RradSPS_2334 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RradSPS_0495 Nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RradSPS_1819 galE: UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RradSPS_0938 NAD dependent epimerase/dehydratase family K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RradSPS_3022 Phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RradSPS_2707 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RradSPS_1129 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RradSPS_1443 Nucleotidyl transferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D RradSPS_1564 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RradSPS_2450 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:rrd00620]
D RradSPS_0746 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RradSPS_0481 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RradSPS_0482 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RradSPS_2476 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_0483 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_0579 Alpha/beta hydrolase family K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_1649 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_0395 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RradSPS_3060 Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RradSPS_2495 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RradSPS_1982 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RradSPS_0800 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RradSPS_1869 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RradSPS_0037 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RradSPS_0922 Biotin-requiring enzyme K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RradSPS_0038 accC: acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RradSPS_0918 accC: acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RradSPS_1870 Carboxyl transferase domain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RradSPS_0454 Acetyl/propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RradSPS_0668 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RradSPS_0932 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4]
D RradSPS_2489 Lactate dehydrogenase and related dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D RradSPS_2490 FAD binding domain K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D RradSPS_0879 Glyoxalase-like domain K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RradSPS_1999 Glyoxalase-like domain K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RradSPS_1334 Zn-dependent hydrolase including glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RradSPS_3077 Metallo-beta-lactamase superfamily K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RradSPS_1119 Zn-dependent hydrolase including glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RradSPS_1261 Metallo-beta-lactamase superfamily K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RradSPS_1100 Malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RradSPS_2187 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RradSPS_1262 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RradSPS_2192 hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RradSPS_2193 hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RradSPS_2283 Fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RradSPS_2185 pckA: phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RradSPS_2983 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RradSPS_1855 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D RradSPS_0604 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0424 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0212 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RradSPS_0215 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rrd00630]
D RradSPS_1854 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D RradSPS_0746 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RradSPS_1855 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D RradSPS_1262 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RradSPS_1617 citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RradSPS_2228 Aconitase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RradSPS_0604 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0424 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0600 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RradSPS_1257 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RradSPS_0448 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RradSPS_0454 Acetyl/propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RradSPS_2060 methylmalonyl-CoA mutase C-terminal domain K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RradSPS_1258 methylmalonyl-CoA mutase N-terminal domain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RradSPS_0427 methylmalonyl-CoA mutase N-terminal domain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RradSPS_2263 FAD/FMN-containing dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RradSPS_2262 FAD/FMN-containing dehydrogenase K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D RradSPS_2261 Fe-S oxidoreductase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D RradSPS_2227 Lactate dehydrogenase and related dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D RradSPS_2554 Conserved region in glutamate synthase K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D RradSPS_1120 GlnA: glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RradSPS_2751 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RradSPS_1590 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RradSPS_2743 Glycine cleavage system protein P (pyridoxal-binding) N-terminal domain K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RradSPS_2742 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RradSPS_2741 gcvT: glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RradSPS_0632 Glycine cleavage system T protein (aminomethyltransferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RradSPS_0395 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RradSPS_2740 gcvH: glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RradSPS_1314 glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D RradSPS_1312 Hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D RradSPS_1313 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D RradSPS_1640 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D RradSPS_2590 TIGR00045: glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RradSPS_2264 Putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RradSPS_2571 Molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RradSPS_2572 Molybdopterin oxidoreductase Fe4S4 domain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RradSPS_2569 4Fe-4S dicluster domain K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RradSPS_0555 alpha/beta hydrolase fold K01432 AFMID; arylformamidase [EC:3.5.1.9]
D RradSPS_1088 PurU: formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RradSPS_2565 putative acetamidase/formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00640 Propanoate metabolism [PATH:rrd00640]
D RradSPS_0746 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RradSPS_1624 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RradSPS_0429 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RradSPS_0430 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RradSPS_2475 Dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RradSPS_0431 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RradSPS_0395 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RradSPS_2106 Enoyl-CoA hydratase/carnithine racemase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RradSPS_1869 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RradSPS_0037 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RradSPS_0922 Biotin-requiring enzyme K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RradSPS_0038 accC: acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RradSPS_0918 accC: acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RradSPS_1870 Carboxyl transferase domain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RradSPS_0454 Acetyl/propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RradSPS_0068 4-aminobutyrate aminotransferase and related aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RradSPS_0350 GABAtrnsam: 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RradSPS_0448 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RradSPS_1257 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RradSPS_2060 methylmalonyl-CoA mutase C-terminal domain K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RradSPS_1258 methylmalonyl-CoA mutase N-terminal domain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RradSPS_0427 methylmalonyl-CoA mutase N-terminal domain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RradSPS_1252 sucCoAbeta: succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RradSPS_1251 sucCoAalpha: succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RradSPS_2819 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RradSPS_3043 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RradSPS_1733 Glycerol dehydrogenase-related enzyme K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:rrd00650]
D RradSPS_0604 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0424 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_2556 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RradSPS_1839 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RradSPS_2106 Enoyl-CoA hydratase/carnithine racemase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RradSPS_2059 Enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D RradSPS_0081 Enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D RradSPS_1714 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RradSPS_0423 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01896 ACSM; medium-chain acyl-CoA synthetase [EC:6.2.1.2]
D RradSPS_2601 Poly(3-hydroxyalkanoate) synthetase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RradSPS_2085 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RradSPS_2088 poly(R)-hydroxyalkanoic acid synthase, class I K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RradSPS_0600 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RradSPS_1067 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D RradSPS_1068 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D RradSPS_0013 Succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RradSPS_0014 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RradSPS_0068 4-aminobutyrate aminotransferase and related aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RradSPS_0350 GABAtrnsam: 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RradSPS_2732 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_1663 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_3101 SSADH: succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_2374 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_1621 HMGL-like K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RradSPS_0618 acetoacetate-CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RradSPS_0617 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RradSPS_1736 Zn-dependent alcohol dehydrogenase K18382 adh1; NAD+-dependent secondary alcohol dehydrogenase Adh1 [EC:1.1.1.-]
D RradSPS_1683 Beta-lactamase class C and other penicillin binding protein K18372 acmB; methyl acetate hydrolase [EC:3.1.1.114]
D RradSPS_0221 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RradSPS_0590 Threonine dehydrogenase and related Zn-dependent dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D RradSPS_0588 23BDH: acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:rrd00660]
D RradSPS_0221 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RradSPS_1692 putative acyl-CoA transferases/carnitine dehydratase K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D RradSPS_1252 sucCoAbeta: succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RradSPS_1251 sucCoAalpha: succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RradSPS_1705 Acyl dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D RradSPS_0140 leuC: 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RradSPS_0141 leuD: 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RradSPS_0213 leuB: 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rrd00562]
D RradSPS_0505 Archaeal fructose-16-bisphosphatase and related enzymes of inositol monophosphatase family K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RradSPS_2403 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D RradSPS_2819 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RradSPS_3043 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RradSPS_1781 tim: triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rrd00190]
D RradSPS_1575 NADH:ubiquinone oxidoreductase subunit 3 (chain A) K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RradSPS_1574 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RradSPS_1573 NADH:ubiquinone oxidoreductase 27 kD subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RradSPS_1572 NADH:ubiquinone oxidoreductase 49 kD subunit 7 K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RradSPS_1571 NADH:ubiquinone oxidoreductase subunit 1 (chain H) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RradSPS_1570 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RradSPS_1568 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RradSPS_1567 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RradSPS_1566 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RradSPS_1565 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RradSPS_1569 NADH:ubiquinone oxidoreductase subunit 6 (chain J) K05578 ndhG; NAD(P)H-quinone oxidoreductase subunit 6 [EC:7.1.1.2]
D RradSPS_1103 NADH dehydrogenase FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RradSPS_1085 NADH dehydrogenase FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RradSPS_1181 NADH dehydrogenase FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RradSPS_0013 Succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RradSPS_0014 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RradSPS_0288 Cytochrome b(N-terminal)/b6/petB K03887 qcrB; quinol---cytochrome c reductase cytochrome b subunit, bacillus type [EC:7.1.1.8]
D RradSPS_0289 Cytochrome b(C-terminal)/b6/petD K03888 qcrC; quinol---cytochrome c reductase cytochrome c subunit, bacillus type [EC:7.1.1.8]
D RradSPS_1346 Cytochrome bd-type quinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RradSPS_3068 Cytochrome bd-type quinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RradSPS_0290 Bacterial Cytochrome Ubiquinol Oxidase K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RradSPS_1347 Cytochrome bd-type quinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RradSPS_3067 cydB: cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RradSPS_1581 atpA: ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RradSPS_1579 atpD: ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RradSPS_1580 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RradSPS_1582 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RradSPS_1578 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RradSPS_1585 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RradSPS_1583 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RradSPS_1584 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RradSPS_2937 Archaeal/vacuolar-type H+-ATPase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D RradSPS_2936 Archaeal/vacuolar-type H+-ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RradSPS_2939 Archaeal/vacuolar-type H+-ATPase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D RradSPS_2944 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D RradSPS_2940 Archaeal/vacuolar-type H+-ATPase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D RradSPS_2942 Archaeal/vacuolar-type H+-ATPase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RradSPS_2941 ATP synthase subunit C K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D RradSPS_0715 DHHA2 domain K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D RradSPS_0502 putative phosphatase K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
D RradSPS_0306 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:rrd00710]
D RradSPS_1782 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RradSPS_1783 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RradSPS_0410 Fructose-16-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RradSPS_3024 DhnA-type fructose-16-bisphosphate aldolase-related enzyme K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RradSPS_2457 cbbA: ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RradSPS_1112 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RradSPS_1598 Fructose-16-bisphosphatase/sedoheptulose 1 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RradSPS_3020 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RradSPS_0058 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RradSPS_2154 rpiA: ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RradSPS_3031 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RradSPS_1781 tim: triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RradSPS_3040 rpe: ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RradSPS_1369 rpe: ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RradSPS_0060 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RradSPS_2185 pckA: phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RradSPS_2983 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RradSPS_1262 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:rrd00720]
D RradSPS_2983 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RradSPS_2187 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RradSPS_1262 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RradSPS_2192 hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RradSPS_2193 hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RradSPS_2283 Fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RradSPS_0013 Succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RradSPS_0014 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RradSPS_1251 sucCoAalpha: succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RradSPS_1252 sucCoAbeta: succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RradSPS_0604 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0424 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_2228 Aconitase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RradSPS_1869 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RradSPS_0037 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RradSPS_0922 Biotin-requiring enzyme K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RradSPS_0038 accC: acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RradSPS_0918 accC: acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RradSPS_1870 Carboxyl transferase domain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RradSPS_1257 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RradSPS_1258 methylmalonyl-CoA mutase N-terminal domain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RradSPS_0427 methylmalonyl-CoA mutase N-terminal domain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RradSPS_2060 methylmalonyl-CoA mutase C-terminal domain K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RradSPS_0631 Formyltetrahydrofolate synthetase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RradSPS_0716 510-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RradSPS_0630 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RradSPS_0746 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:rrd00680]
D RradSPS_2573 formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D RradSPS_2629 NDMA-dependent methanol dehydrogenase K17067 mdo; formaldehyde dismutase / methanol dehydrogenase [EC:1.2.98.1 1.1.99.37]
D RradSPS_1982 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RradSPS_1983 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D RradSPS_2571 Molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RradSPS_2572 Molybdopterin oxidoreductase Fe4S4 domain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RradSPS_2569 4Fe-4S dicluster domain K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RradSPS_1590 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RradSPS_2264 Putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RradSPS_0799 eno: phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RradSPS_1262 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RradSPS_0410 Fructose-16-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RradSPS_3024 DhnA-type fructose-16-bisphosphate aldolase-related enzyme K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RradSPS_2457 cbbA: ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RradSPS_1112 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RradSPS_1598 Fructose-16-bisphosphatase/sedoheptulose 1 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RradSPS_1632 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RradSPS_1865 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RradSPS_0875 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1]
D RradSPS_0746 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RradSPS_1228 Fructose-26-bisphosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RradSPS_0297 apgM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RradSPS_0724 PGDH: phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RradSPS_3025 Phosphoglycerate dehydrogenase and related dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RradSPS_0487 Phosphosulfolactate phosphohydrolase-related enzyme K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D RradSPS_0623 Phosphosulfolactate phosphohydrolase-related enzyme K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D RradSPS_0884 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32]
D RradSPS_0869 2-phospho-L-lactate guanylyltransferase K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D RradSPS_0868 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D RradSPS_0871 F420-0:gamma-glutamyl ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:rrd00910]
D RradSPS_2565 putative acetamidase/formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D RradSPS_0572 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RradSPS_0573 narG: nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D RradSPS_0574 narH: nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D RradSPS_0576 narI: respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D RradSPS_0874 Sulfite reductase beta subunit (hemoprotein) K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D RradSPS_0402 Dioxygenases related to 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RradSPS_0425 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RradSPS_1120 GlnA: glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RradSPS_2751 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RradSPS_2555 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RradSPS_2554 Conserved region in glutamate synthase K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D RradSPS_0609 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rrd00920]
D RradSPS_0877 sopT: sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RradSPS_0878 apsK: adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D RradSPS_1419 Exopolyphosphatase-related protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D RradSPS_0873 cysH: phosophoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RradSPS_2794 NADH dehydrogenase FAD-containing subunit K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RradSPS_2972 Pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RradSPS_2973 Pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RradSPS_2045 Pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RradSPS_2503 DoxX K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D RradSPS_2671 TQO small subunit DoxD K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D RradSPS_2444 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RradSPS_0885 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RradSPS_2028 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RradSPS_2747 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RradSPS_2566 Homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RradSPS_1046 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RradSPS_2815 56kDa selenium binding protein (SBP56) K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rrd00061]
D RradSPS_1869 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RradSPS_0037 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RradSPS_0922 Biotin-requiring enzyme K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RradSPS_0038 accC: acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RradSPS_0918 accC: acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RradSPS_1870 Carboxyl transferase domain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RradSPS_0454 Acetyl/propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RradSPS_1388 acyl carrier protein K02078 acpP; acyl carrier protein
D RradSPS_1385 (acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RradSPS_0242 (acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RradSPS_1384 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RradSPS_1389 fabF: beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RradSPS_1040 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RradSPS_2980 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_0599 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_1387 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_0625 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_1154 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_2857 Short-chain alcohol dehydrogenase of unknown specificity K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_1386 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RradSPS_2806 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_2083 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_0640 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_1842 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rrd00071]
D RradSPS_0604 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0424 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_2105 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RradSPS_1838 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RradSPS_2106 Enoyl-CoA hydratase/carnithine racemase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RradSPS_1839 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RradSPS_0557 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RradSPS_2104 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RradSPS_1659 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RradSPS_2089 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RradSPS_1843 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RradSPS_2806 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_2083 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_0640 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_1842 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_1982 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RradSPS_3060 Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RradSPS_2495 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
D RradSPS_1897 HAD-SF-IB-hyp1: HAD hydrolase, family IB K13356 FAR; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rrd00561]
D RradSPS_2590 TIGR00045: glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RradSPS_2264 Putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RradSPS_1024 dhaK1: dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D RradSPS_1026 dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D RradSPS_1027 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D RradSPS_1733 Glycerol dehydrogenase-related enzyme K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D RradSPS_2458 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RradSPS_1023 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RradSPS_1383 plsX: fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RradSPS_1898 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RradSPS_1445 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RradSPS_1515 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RradSPS_1272 NAD dependent epimerase/dehydratase family K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D RradSPS_1823 Alpha-galactosidase/6-phospho-beta-glucosidase family 4 of glycosyl hydrolase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:rrd00564]
D RradSPS_3033 Glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RradSPS_3034 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RradSPS_2459 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RradSPS_2477 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RradSPS_1898 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RradSPS_1445 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RradSPS_1515 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RradSPS_1778 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RradSPS_2094 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RradSPS_1409 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RradSPS_0133 Phosphatidylserine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D RradSPS_0153 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RradSPS_0152 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RradSPS_1182 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RradSPS_0961 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-related enzyme K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RradSPS_0778 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-related enzyme K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RradSPS_3030 Glycerol dehydrogenase-related enzyme K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D RradSPS_2472 Iron-containing alcohol dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:rrd00600]
D RradSPS_1823 Alpha-galactosidase/6-phospho-beta-glucosidase family 4 of glycosyl hydrolase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:rrd00592]
D RradSPS_2105 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RradSPS_1838 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
D RradSPS_2093 GDSL-like Lipase/Acylhydrolase family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rrd00230]
D RradSPS_2438 NUDIX domain K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RradSPS_2415 NUDIX domain K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RradSPS_2240 deoB: phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RradSPS_0787 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RradSPS_0912 purF: amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RradSPS_0904 purD: phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RradSPS_0915 PurN: phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RradSPS_0910 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D RradSPS_0908 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D RradSPS_0909 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RradSPS_0914 purM: phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RradSPS_2922 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RradSPS_2923 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RradSPS_0907 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RradSPS_0906 purB: adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RradSPS_0916 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RradSPS_1439 apt: adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RradSPS_0501 surE: 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RradSPS_2984 HAD-SF-IIA: HAD hydrolase, family IIA K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D RradSPS_2243 Purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RradSPS_1495 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RradSPS_0125 HGPRTase: hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RradSPS_1974 HGPRTase: hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RradSPS_0696 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RradSPS_1541 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RradSPS_0480 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RradSPS_1689 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL-like protein K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D RradSPS_1690 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM-like protein K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D RradSPS_1691 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS-like protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D RradSPS_0697 GMP synthase (glutamine-hydrolyzing), C-terminal domain K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RradSPS_1480 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RradSPS_2290 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RradSPS_1510 putative dGTPase K01129 dgt; dGTPase [EC:3.1.5.1]
D RradSPS_1332 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RradSPS_0305 Ppx/GppA phosphatase family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RradSPS_0903 purA: adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RradSPS_1657 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D RradSPS_2567 adk: adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RradSPS_1922 adk: adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RradSPS_0878 apsK: adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D RradSPS_0877 sopT: sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RradSPS_1305 urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3]
D RradSPS_1306 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RradSPS_1304 UHCUDC: OHCU decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D RradSPS_1308 allantoinase: allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D RradSPS_1307 hydantase: amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9]
D RradSPS_0069 hydantase: amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9]
D RradSPS_3054 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:rrd00240]
D RradSPS_1484 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RradSPS_1485 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RradSPS_1487 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RradSPS_1486 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RradSPS_1482 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D RradSPS_1483 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D RradSPS_0511 pyrE: orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RradSPS_0513 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RradSPS_1406 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RradSPS_1541 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RradSPS_1540 maf: septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RradSPS_1454 PyrG: CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RradSPS_1446 cmk: cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RradSPS_0501 surE: 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RradSPS_2984 HAD-SF-IIA: HAD hydrolase, family IIA K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D RradSPS_1589 upp: uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RradSPS_1488 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RradSPS_1514 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RradSPS_2290 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RradSPS_1588 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RradSPS_1741 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RradSPS_0380 dut: dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RradSPS_2242 pyrimidine-nucleoside phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D RradSPS_2250 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RradSPS_0375 thyX: thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RradSPS_0067 D-hydantoinase: dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RradSPS_3055 Amidases related to nicotinamidase K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rrd00250]
D RradSPS_1685 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RradSPS_0090 Aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RradSPS_1851 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RradSPS_2071 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RradSPS_2820 alaDH: alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RradSPS_2965 alaDH: alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RradSPS_1451 alaDH: alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RradSPS_0342 alaDH: alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RradSPS_2293 argG: argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RradSPS_0887 argH: argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RradSPS_0903 purA: adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RradSPS_0906 purB: adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RradSPS_1487 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RradSPS_0068 4-aminobutyrate aminotransferase and related aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RradSPS_0350 GABAtrnsam: 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RradSPS_2732 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_1663 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_3101 SSADH: succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_2374 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_2555 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RradSPS_0425 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RradSPS_0321 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D RradSPS_1120 GlnA: glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RradSPS_2751 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RradSPS_1484 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RradSPS_1485 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RradSPS_0891 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RradSPS_0909 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RradSPS_0674 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RradSPS_0912 purF: amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rrd00260]
D RradSPS_2655 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RradSPS_1048 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RradSPS_1050 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RradSPS_1049 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RradSPS_0226 thrB: homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D RradSPS_0227 thrC: threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RradSPS_0670 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RradSPS_1590 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RradSPS_2590 TIGR00045: glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RradSPS_2264 Putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RradSPS_1228 Fructose-26-bisphosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RradSPS_0297 apgM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RradSPS_0724 PGDH: phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RradSPS_3025 Phosphoglycerate dehydrogenase and related dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RradSPS_3071 Cu2+-containing amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D RradSPS_0331 Cu2+-containing amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D RradSPS_2743 Glycine cleavage system protein P (pyridoxal-binding) N-terminal domain K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RradSPS_2742 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RradSPS_2741 gcvT: glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RradSPS_0632 Glycine cleavage system T protein (aminomethyltransferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RradSPS_0395 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RradSPS_2740 gcvH: glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RradSPS_2517 FAD dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D RradSPS_0153 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RradSPS_0636 Alcohol dehydrogenase class IV K11440 gbsB; choline dehydrogenase [EC:1.1.1.1]
D RradSPS_0333 NAD-dependent aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D RradSPS_2966 NAD-dependent aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D RradSPS_0628 FAD dependent oxidoreductase K00309 dmg; dimethylglycine oxidase [EC:1.5.3.10]
D RradSPS_0633 Glycine/D-amino acid oxidases (deaminating) K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D RradSPS_1871 trpA: tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RradSPS_1872 trpB: tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RradSPS_0179 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rrd00270]
D RradSPS_2747 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RradSPS_0729 metH: methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RradSPS_0730 Homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D RradSPS_1477 metK: methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RradSPS_1495 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RradSPS_2728 Cytosine deaminase and related metal-dependent hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D RradSPS_1708 Cytosine deaminase and related metal-dependent hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D RradSPS_2985 S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RradSPS_1777 S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RradSPS_2655 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RradSPS_1048 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RradSPS_1050 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RradSPS_1049 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RradSPS_2566 Homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RradSPS_1046 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RradSPS_1047 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RradSPS_0217 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RradSPS_1685 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RradSPS_2444 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RradSPS_0885 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RradSPS_2028 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RradSPS_1262 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RradSPS_2141 cysKM: cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D RradSPS_0724 PGDH: phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RradSPS_3025 Phosphoglycerate dehydrogenase and related dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:rrd00280]
D RradSPS_0217 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RradSPS_0446 Glutamate dehydrogenase/leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D RradSPS_0429 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RradSPS_0430 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RradSPS_2475 Dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RradSPS_0431 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RradSPS_0395 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RradSPS_0557 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RradSPS_2104 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RradSPS_1634 Acyl-CoA dehydrogenase K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D RradSPS_2106 Enoyl-CoA hydratase/carnithine racemase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RradSPS_2105 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RradSPS_1838 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RradSPS_0448 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RradSPS_0454 Acetyl/propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RradSPS_1257 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RradSPS_2060 methylmalonyl-CoA mutase C-terminal domain K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RradSPS_1258 methylmalonyl-CoA mutase N-terminal domain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RradSPS_0427 methylmalonyl-CoA mutase N-terminal domain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RradSPS_2379 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RradSPS_2819 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RradSPS_3043 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RradSPS_0350 GABAtrnsam: 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RradSPS_1627 Acetyl/propionyl-CoA carboxylase alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D RradSPS_1629 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D RradSPS_1621 HMGL-like K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RradSPS_0618 acetoacetate-CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RradSPS_0604 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0424 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rrd00290]
D RradSPS_0140 leuC: 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RradSPS_0141 leuD: 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RradSPS_0213 leuB: 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RradSPS_0221 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RradSPS_0218 ilvC: ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RradSPS_1324 ilvD: dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RradSPS_0720 Dehydratase family K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RradSPS_0217 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RradSPS_0446 Glutamate dehydrogenase/leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D RradSPS_0212 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RradSPS_0215 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rrd00300]
D RradSPS_1049 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RradSPS_2655 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RradSPS_1048 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RradSPS_1050 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RradSPS_2656 dapA: dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RradSPS_2657 dapB: dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RradSPS_2675 Tetrahydrodipicolinate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RradSPS_2300 argD: transaminase, acetylornithine/succinylornithine family K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RradSPS_1576 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RradSPS_2676 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RradSPS_2661 DapF: diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RradSPS_2674 DapC: succinyldiaminopimelate transaminase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D RradSPS_2673 lysA: diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RradSPS_0479 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RradSPS_0507 murE: UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RradSPS_1504 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rrd00310]
D RradSPS_0418 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RradSPS_0395 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RradSPS_1659 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RradSPS_2089 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RradSPS_1843 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RradSPS_2106 Enoyl-CoA hydratase/carnithine racemase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RradSPS_0604 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0424 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0350 GABAtrnsam: 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RradSPS_2732 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_1663 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_3101 SSADH: succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_2374 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_2468 Prokaryotic protein of unknown function (DUF849) K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D RradSPS_1714 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
C 00220 Arginine biosynthesis [PATH:rrd00220]
D RradSPS_2301 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RradSPS_2293 argG: argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RradSPS_0887 argH: argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RradSPS_1246 arginase K01476 rocF; arginase [EC:3.5.3.1]
D RradSPS_0919 Allophanate hydrolase subunit 1 K01941 uca; urea carboxylase [EC:6.3.4.6]
D RradSPS_0891 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RradSPS_0909 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RradSPS_1120 GlnA: glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RradSPS_2751 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RradSPS_1484 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RradSPS_1485 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RradSPS_0425 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RradSPS_1685 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RradSPS_2298 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RradSPS_2299 argB: acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RradSPS_2297 argC: N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RradSPS_2300 argD: transaminase, acetylornithine/succinylornithine family K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RradSPS_2521 DapE-ArgE: peptidase, ArgE/DapE family K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:rrd00330]
D RradSPS_2486 N-methylhydantoinase A/acetone carboxylase beta subunit K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D RradSPS_1620 N-methylhydantoinase A/acetone carboxylase beta subunit K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D RradSPS_2485 N-methylhydantoinase B/acetone carboxylase alpha subunit K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D RradSPS_1619 N-methylhydantoinase B/acetone carboxylase alpha subunit K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D RradSPS_0348 agmatinase: agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RradSPS_2822 agmatinase: agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RradSPS_3051 Arginase/agmatinase/formimionoglutamate hydrolase arginase family K01480 speB; agmatinase [EC:3.5.3.11]
D RradSPS_2967 agmatinase: agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RradSPS_2074 NAD-dependent aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D RradSPS_2327 Acetyltransferase (GNAT) family K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D RradSPS_1676 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_0079 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_0954 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_1413 putative acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_1246 arginase K01476 rocF; arginase [EC:3.5.3.1]
D RradSPS_1492 proC: pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RradSPS_0320 Proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D RradSPS_0321 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D RradSPS_2259 Alpha/beta hydrolase family K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RradSPS_1685 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RradSPS_1992 Hypothetical Protein K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
D RradSPS_2041 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
D RradSPS_2517 FAD dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
C 00340 Histidine metabolism [PATH:rrd00340]
D RradSPS_1090 hisG: ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RradSPS_1089 ATP phosphoribosyltransferase, regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RradSPS_1903 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D RradSPS_1096 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RradSPS_1095 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RradSPS_1904 hisF: imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RradSPS_1093 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RradSPS_2159 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RradSPS_0828 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RradSPS_2173 Archaeal fructose-16-bisphosphatase and related enzymes of inositol monophosphatase family K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D RradSPS_2118 histidinol phosphate phosphatase, HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D RradSPS_1091 hisD: histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RradSPS_2177 ergothioneine biosynthesis protein EgtB K18912 egtB; gamma-glutamyl hercynylcysteine S-oxide synthase [EC:1.14.99.50]
C 00350 Tyrosine metabolism [PATH:rrd00350]
D RradSPS_1685 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RradSPS_2159 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RradSPS_0828 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RradSPS_3071 Cu2+-containing amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D RradSPS_0331 Cu2+-containing amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D RradSPS_1677 NAD-dependent aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D RradSPS_1982 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RradSPS_3060 Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RradSPS_2495 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RradSPS_2732 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_1663 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_3101 SSADH: succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_2374 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_2979 Zn-dependent alcohol dehydrogenases class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00360 Phenylalanine metabolism [PATH:rrd00360]
D RradSPS_3071 Cu2+-containing amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D RradSPS_0331 Cu2+-containing amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D RradSPS_1677 NAD-dependent aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D RradSPS_1670 hypothetical protein K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D RradSPS_0621 Enoyl-CoA hydratase/carnithine racemase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D RradSPS_2106 Enoyl-CoA hydratase/carnithine racemase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RradSPS_2556 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RradSPS_1685 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RradSPS_2159 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RradSPS_0828 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RradSPS_2584 Acetyltransferase (GNAT) family K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D RradSPS_2979 Zn-dependent alcohol dehydrogenases class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D RradSPS_1676 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_0079 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_0954 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_1413 putative acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_2725 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:rrd00380]
D RradSPS_0555 alpha/beta hydrolase fold K01432 AFMID; arylformamidase [EC:3.5.1.9]
D RradSPS_0418 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RradSPS_0395 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RradSPS_1659 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RradSPS_2089 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RradSPS_1843 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RradSPS_2106 Enoyl-CoA hydratase/carnithine racemase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RradSPS_0604 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0424 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_1676 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_0079 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_0954 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_1413 putative acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rrd00400]
D RradSPS_0870 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RradSPS_1466 aroB: 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RradSPS_1465 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RradSPS_1075 aroE: shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RradSPS_1447 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RradSPS_1468 aroC: chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RradSPS_1902 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RradSPS_1880 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RradSPS_1879 trpD: anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RradSPS_1873 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RradSPS_1878 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RradSPS_1871 trpA: tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RradSPS_1872 trpB: tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RradSPS_0179 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RradSPS_1223 Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D RradSPS_2160 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RradSPS_1685 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RradSPS_2159 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RradSPS_0828 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rrd00410]
D RradSPS_0068 4-aminobutyrate aminotransferase and related aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RradSPS_0350 GABAtrnsam: 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RradSPS_3071 Cu2+-containing amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D RradSPS_0331 Cu2+-containing amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D RradSPS_0443 panC: pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RradSPS_0067 D-hydantoinase: dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RradSPS_2106 Enoyl-CoA hydratase/carnithine racemase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RradSPS_2819 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RradSPS_3043 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:rrd00430]
D RradSPS_1245 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RradSPS_2270 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RradSPS_2483 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RradSPS_2821 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D RradSPS_2820 alaDH: alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RradSPS_2965 alaDH: alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RradSPS_1451 alaDH: alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RradSPS_0342 alaDH: alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RradSPS_0425 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
D RradSPS_1628 Beta-lactamase superfamily domain K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:rrd00450]
D RradSPS_0729 metH: methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RradSPS_0730 Homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D RradSPS_0074 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RradSPS_0877 sopT: sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RradSPS_1016 selD: selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RradSPS_1761 selA: L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D RradSPS_0379 metG: methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rrd00460]
D RradSPS_1822 BGL: beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RradSPS_1245 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RradSPS_2270 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RradSPS_2483 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RradSPS_1851 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RradSPS_1590 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RradSPS_2565 putative acetamidase/formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:rrd00470]
D RradSPS_0681 alr: alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RradSPS_0478 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RradSPS_0294 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RradSPS_0891 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RradSPS_0909 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RradSPS_1554 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RradSPS_1502 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RradSPS_2661 DapF: diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RradSPS_2673 lysA: diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RradSPS_2517 FAD dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D RradSPS_1992 Hypothetical Protein K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
D RradSPS_2041 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
C 00480 Glutathione metabolism [PATH:rrd00480]
D RradSPS_1245 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RradSPS_2270 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RradSPS_2483 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RradSPS_0921 Uncharacterized proteins homologs of lactam utilization protein B K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D RradSPS_0032 carboxylate-amine ligase, YbdK family K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D RradSPS_1123 carboxylate-amine ligase, YbdK family K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D RradSPS_2467 aa-his-dipept: Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RradSPS_0080 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RradSPS_0061 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RradSPS_0062 zwf: glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RradSPS_0959 zwf: glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rrd00541]
D RradSPS_2334 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RradSPS_0495 Nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RradSPS_1819 galE: UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RradSPS_0938 NAD dependent epimerase/dehydratase family K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RradSPS_0460 NDP-sugDHase: nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RradSPS_0230 rmlA: glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RradSPS_0229 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RradSPS_0461 Nucleoside-diphosphate-sugar epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RradSPS_2711 dTDP-4-dehydrorhamnose 35-epimerase-related enzyme K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RradSPS_0231 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RradSPS_0235 rmlD: dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RradSPS_2707 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RradSPS_1129 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RradSPS_0786 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:rrd00550]
D RradSPS_1577 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RradSPS_2449 murB: UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RradSPS_1499 murC: UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RradSPS_1502 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RradSPS_0507 murE: UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RradSPS_0478 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RradSPS_0294 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RradSPS_1504 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RradSPS_1408 uppS: di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RradSPS_3036 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RradSPS_1222 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RradSPS_1503 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RradSPS_1500 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RradSPS_1098 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RradSPS_1286 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RradSPS_0504 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RradSPS_1131 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RradSPS_1505 Cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RradSPS_0024 Cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D RradSPS_0516 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RradSPS_0266 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RradSPS_1533 UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D RradSPS_0251 putative glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:rrd00552]
D RradSPS_3036 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RradSPS_1222 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RradSPS_2336 glycosyltransferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RradSPS_0115 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RradSPS_1551 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rrd00730]
D RradSPS_2433 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RradSPS_1357 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RradSPS_0091 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RradSPS_0585 glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D RradSPS_0586 thiS: thiamine biosynthesis protein ThiS K03149 thiG; thiazole synthase [EC:2.8.1.10]
D RradSPS_2432 thiM: hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RradSPS_2429 thiE: thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RradSPS_0587 thiE: thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RradSPS_2427 thiL: thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RradSPS_2567 adk: adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RradSPS_1922 adk: adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RradSPS_2426 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D RradSPS_0582 Putative transcription activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D RradSPS_0583 Putative transcription activator K20896 TENA_E; formylaminopyrimidine deformylase / aminopyrimidine aminohydrolase [EC:3.5.1.- 3.5.99.-]
C 00740 Riboflavin metabolism [PATH:rrd00740]
D RradSPS_1372 ribA: GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RradSPS_1370 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RradSPS_1373 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RradSPS_1371 ribE: riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RradSPS_1421 ribF: riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RradSPS_2432 thiM: hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RradSPS_2438 NUDIX domain K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RradSPS_2415 NUDIX domain K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rrd00750]
D RradSPS_2066 pdxH: pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RradSPS_2235 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D RradSPS_0227 thrC: threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RradSPS_1292 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D RradSPS_1293 pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rrd00760]
D RradSPS_0090 Aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RradSPS_0088 nadA: quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RradSPS_0089 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RradSPS_1244 Nicotinic acid phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RradSPS_2243 Purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RradSPS_0501 surE: 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RradSPS_2984 HAD-SF-IIA: HAD hydrolase, family IIA K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D RradSPS_1529 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RradSPS_2069 NTP pyrophosphohydrolases containing a Zn-finger probably nucleic-acid-binding K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RradSPS_2408 nadE: NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D RradSPS_1336 NAD-dependent protein deacetylases SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RradSPS_1460 putative sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RradSPS_0300 protein of unknown function (DUF3814) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RradSPS_0301 NAD/NADP transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RradSPS_0299 NAD/NADP transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RradSPS_1618 Isochorismatase family K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D RradSPS_2732 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_1663 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_3101 SSADH: succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RradSPS_2374 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rrd00770]
D RradSPS_0221 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RradSPS_0218 ilvC: ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RradSPS_1324 ilvD: dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RradSPS_0720 Dehydratase family K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RradSPS_0442 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RradSPS_0443 panC: pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RradSPS_0323 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D RradSPS_1478 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RradSPS_1379 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RradSPS_1802 TIGR00152: dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RradSPS_0678 phosphopantetheine--protein transferase domain K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RradSPS_0217 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RradSPS_0067 D-hydantoinase: dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
C 00780 Biotin metabolism [PATH:rrd00780]
D RradSPS_1389 fabF: beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RradSPS_1040 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RradSPS_2980 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_0599 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_1387 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_0625 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_1154 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_2857 Short-chain alcohol dehydrogenase of unknown specificity K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_1386 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RradSPS_2787 7-keto-8-aminopelargonate synthetase-related enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RradSPS_0470 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rrd00785]
D RradSPS_0403 lipB: lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RradSPS_0401 lipA: lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RradSPS_0867 Lipoate-protein ligase A K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D RradSPS_2681 Biotin/lipoate A/B protein ligase family K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D RradSPS_0395 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RradSPS_0481 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RradSPS_0482 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RradSPS_2476 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_0483 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_0579 Alpha/beta hydrolase family K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_1649 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RradSPS_0417 oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RradSPS_0418 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RradSPS_0429 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RradSPS_0430 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RradSPS_2475 Dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RradSPS_0431 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RradSPS_2743 Glycine cleavage system protein P (pyridoxal-binding) N-terminal domain K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RradSPS_2742 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RradSPS_2741 gcvT: glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RradSPS_0632 Glycine cleavage system T protein (aminomethyltransferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RradSPS_2740 gcvH: glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rrd00790]
D RradSPS_1161 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RradSPS_0325 Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RradSPS_2123 folB: dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RradSPS_1970 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RradSPS_1971 DHPS: dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RradSPS_0278 DHPS: dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RradSPS_1544 folC: bifunctional protein FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RradSPS_1372 ribA: GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RradSPS_2120 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RradSPS_1816 Pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RradSPS_0971 moaA: molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RradSPS_1759 moaC: molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RradSPS_0389 Molybdopterin converting factor large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RradSPS_1118 molybdenum cofactor synthesis domain K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RradSPS_0252 molybdenum cofactor synthesis domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RradSPS_1234 Molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rrd00670]
D RradSPS_0631 Formyltetrahydrofolate synthetase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RradSPS_0716 510-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RradSPS_1590 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RradSPS_0915 PurN: phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RradSPS_0916 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RradSPS_1474 fmt: methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RradSPS_2741 gcvT: glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RradSPS_0632 Glycine cleavage system T protein (aminomethyltransferase) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RradSPS_0729 metH: methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RradSPS_0730 Homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D RradSPS_0375 thyX: thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RradSPS_1088 PurU: formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RradSPS_0630 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RradSPS_2550 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rrd00860]
D RradSPS_1961 Glutamyl- and glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_0537 glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_2267 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_1757 hemA: glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RradSPS_1753 hemL: glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RradSPS_1754 Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RradSPS_1756 hemC: porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RradSPS_1755 uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D RradSPS_1758 siroheme synthase, N-terminal domain K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D RradSPS_2515 AsnC-type helix-turn-helix domain K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D RradSPS_1126 hypothetical protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RradSPS_0824 hypothetical protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RradSPS_0817 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D RradSPS_0821 precorrin-3B C17-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D RradSPS_0818 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RradSPS_0819 cbiD: cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D RradSPS_0820 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D RradSPS_0823 Precorrin isomerase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RradSPS_0816 cobB: cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RradSPS_0812 cobaltochelatase, CobN subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D RradSPS_2694 ATPcob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RradSPS_0815 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RradSPS_0811 cobQ: cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RradSPS_0827 cobD: cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RradSPS_0830 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RradSPS_0826 cobS: cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RradSPS_0825 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RradSPS_0814 von Willebrand factor type A domain K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D RradSPS_2244 Nitrogenase component 1 type Oxidoreductase K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D RradSPS_2245 Nitrogenase component 1 type Oxidoreductase K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D RradSPS_1219 putative enzyme involved in biosynthesis of extracellular polysaccharides K07145 isdG; heme oxygenase (staphylobilin-producing) [EC:1.14.99.48]
D RradSPS_1028 Protein distantly related to bacterial ferritins K03594 bfr; bacterioferritin [EC:1.16.3.1]
D RradSPS_3090 Putative multicopper oxidase K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rrd00130]
D RradSPS_1751 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RradSPS_2316 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D RradSPS_2315 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D RradSPS_2312 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D RradSPS_2310 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D RradSPS_2309 menE: O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D RradSPS_2311 menB: naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D RradSPS_2535 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D RradSPS_1746 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RradSPS_2011 NAD(P)Hquinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rrd00900]
D RradSPS_1410 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RradSPS_1963 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RradSPS_0785 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RradSPS_1962 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RradSPS_1412 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RradSPS_2010 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RradSPS_0604 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0424 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_1462 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RradSPS_1408 uppS: di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rrd00906]
D RradSPS_0731 Phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RradSPS_0732 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D RradSPS_3062 Lycopene cyclase protein K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:rrd00907]
D RradSPS_2106 Enoyl-CoA hydratase/carnithine racemase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RradSPS_1621 HMGL-like K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RradSPS_2105 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RradSPS_1838 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RradSPS_3020 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RradSPS_0058 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics [PATH:rrd01059]
D RradSPS_0847 Flavin reductase like domain K21185 sgcE6; flavin reductase
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rrd00523]
D RradSPS_0230 rmlA: glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RradSPS_0229 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RradSPS_0461 Nucleoside-diphosphate-sugar epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RradSPS_2711 dTDP-4-dehydrorhamnose 35-epimerase-related enzyme K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RradSPS_0231 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RradSPS_0235 rmlD: dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D RradSPS_2316 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D RradSPS_0229 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RradSPS_0461 Nucleoside-diphosphate-sugar epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rrd00946]
D RradSPS_1822 BGL: beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
D RradSPS_1305 urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3]
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:rrd00311]
D RradSPS_2517 FAD dependent oxidoreductase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D RradSPS_1779 Protein related to penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RradSPS_2347 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RradSPS_0421 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RradSPS_1638 Beta-lactamase enzyme family K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:rrd00261]
D RradSPS_0877 sopT: sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RradSPS_2655 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RradSPS_1048 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RradSPS_1050 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RradSPS_2656 dapA: dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RradSPS_2657 dapB: dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rrd00521]
D RradSPS_0182 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_0781 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_3047 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_2403 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D RradSPS_0505 Archaeal fructose-16-bisphosphatase and related enzymes of inositol monophosphatase family K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RradSPS_0230 rmlA: glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RradSPS_0229 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RradSPS_0461 Nucleoside-diphosphate-sugar epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RradSPS_2711 dTDP-4-dehydrorhamnose 35-epimerase-related enzyme K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RradSPS_0231 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RradSPS_0235 rmlD: dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RradSPS_0182 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_0781 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RradSPS_3047 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rrd00525]
D RradSPS_0230 rmlA: glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RradSPS_0229 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RradSPS_0461 Nucleoside-diphosphate-sugar epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rrd00401]
D RradSPS_2160 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RradSPS_1685 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RradSPS_2159 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RradSPS_0828 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RradSPS_1902 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RradSPS_1880 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RradSPS_1385 (acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RradSPS_0242 (acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RradSPS_2980 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_0599 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_1387 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_0625 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_1154 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_2857 Short-chain alcohol dehydrogenase of unknown specificity K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RradSPS_1388 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rrd00999]
D RradSPS_1477 metK: methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RradSPS_1075 aroE: shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RradSPS_1822 BGL: beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D RradSPS_0901 ParB-like nuclease domain K23371 sbnI; L-serine kinase (ATP) / ParB family transcriptional regulator, heme-responsive regulator [EC:2.7.1.225]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rrd00362]
D RradSPS_1709 Dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RradSPS_0955 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D RradSPS_2105 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RradSPS_1838 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RradSPS_0598 putative ring-cleavage extradiol dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D RradSPS_1062 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D RradSPS_1061 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D RradSPS_1063 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D RradSPS_1064 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RradSPS_1066 FAD binding domain K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D RradSPS_2824 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D RradSPS_2825 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D RradSPS_1839 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RradSPS_1659 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RradSPS_2089 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RradSPS_1843 Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RradSPS_2106 Enoyl-CoA hydratase/carnithine racemase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RradSPS_2556 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RradSPS_0604 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0424 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rrd00627]
D RradSPS_1676 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_0079 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_0954 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_1413 putative acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_0668 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RradSPS_0843 Thiamine pyrophosphate-requiring enzyme K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D RradSPS_2796 FAD binding domain K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D RradSPS_1714 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RradSPS_2106 Enoyl-CoA hydratase/carnithine racemase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:rrd00364]
D RradSPS_1709 Dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rrd00625]
D RradSPS_1846 putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D RradSPS_3060 Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RradSPS_2495 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RradSPS_1982 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RradSPS_2573 formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D RradSPS_2629 NDMA-dependent methanol dehydrogenase K17067 mdo; formaldehyde dismutase / methanol dehydrogenase [EC:1.2.98.1 1.1.99.37]
D RradSPS_2511 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RradSPS_1094 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RradSPS_1615 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rrd00361]
D RradSPS_1846 putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D RradSPS_1709 Dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RradSPS_0598 putative ring-cleavage extradiol dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D RradSPS_2511 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RradSPS_1094 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RradSPS_1615 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:rrd00623]
D RradSPS_2796 FAD binding domain K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D RradSPS_2979 Zn-dependent alcohol dehydrogenases class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D RradSPS_1709 Dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
C 00622 Xylene degradation [PATH:rrd00622]
D RradSPS_2979 Zn-dependent alcohol dehydrogenases class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D RradSPS_0598 putative ring-cleavage extradiol dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D RradSPS_2105 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RradSPS_1838 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rrd00643]
D RradSPS_1677 NAD-dependent aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D RradSPS_1676 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_0079 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_0954 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_1413 putative acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RradSPS_0598 putative ring-cleavage extradiol dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D RradSPS_1067 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D RradSPS_1068 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
D RradSPS_0919 Allophanate hydrolase subunit 1 K01941 uca; urea carboxylase [EC:6.3.4.6]
C 00930 Caprolactam degradation
D RradSPS_2106 Enoyl-CoA hydratase/carnithine racemase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:rrd00626]
D RradSPS_3060 Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RradSPS_2495 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RradSPS_1982 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D RradSPS_1062 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D RradSPS_1061 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rrd03020]
D RradSPS_1950 rpoB: DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RradSPS_1949 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RradSPS_1915 rpoA: DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RradSPS_1479 rpoZ: DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rrd03010]
D RradSPS_1803 S1 RNA binding domain K02945 RP-S1; small subunit ribosomal protein S1
D RradSPS_1404 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RradSPS_1937 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RradSPS_1916 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RradSPS_1926 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RradSPS_0736 S6: ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RradSPS_1947 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RradSPS_1929 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RradSPS_1907 Ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RradSPS_1944 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RradSPS_1917 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RradSPS_1948 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RradSPS_1918 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RradSPS_1930 Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RradSPS_1422 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RradSPS_1394 S16: ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RradSPS_1934 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RradSPS_0737 S18: ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RradSPS_1939 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RradSPS_1524 S20: ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RradSPS_1953 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RradSPS_1940 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RradSPS_1943 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RradSPS_1942 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RradSPS_1931 Ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RradSPS_1928 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RradSPS_1951 L12: ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RradSPS_0738 L9: ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RradSPS_1952 Ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RradSPS_1954 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RradSPS_1908 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RradSPS_1933 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RradSPS_1924 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RradSPS_1936 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RradSPS_1914 L17: ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RradSPS_1927 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RradSPS_1398 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RradSPS_1532 L21: ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RradSPS_1938 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RradSPS_1941 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RradSPS_1932 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RradSPS_0788 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D RradSPS_1531 L27: ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RradSPS_1374 L28: ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RradSPS_1935 L29: ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RradSPS_1925 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RradSPS_1596 L31: ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RradSPS_1382 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RradSPS_1142 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RradSPS_1278 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RradSPS_1919 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RradSPS_R0049 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rrd00970]
D RradSPS_R0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RradSPS_R0008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RradSPS_R0046 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RradSPS_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RradSPS_R0007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RradSPS_R0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RradSPS_R0022 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RradSPS_R0014 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RradSPS_R0019 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RradSPS_R0010 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RradSPS_R0003 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RradSPS_R0043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RradSPS_R0016 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RradSPS_R0027 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RradSPS_R0018 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RradSPS_R0001 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RradSPS_R0025 tRNA-His K14226 tRNA-His; tRNA His
D RradSPS_R0005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RradSPS_R0002 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RradSPS_R0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RradSPS_R0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RradSPS_R0024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RradSPS_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RradSPS_R0017 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RradSPS_R0004 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RradSPS_R0038 tRNA-Met K14230 tRNA-Met; tRNA Met
D RradSPS_R0021 tRNA-Met K14230 tRNA-Met; tRNA Met
D RradSPS_R0034 tRNA-Met K14230 tRNA-Met; tRNA Met
D RradSPS_R0013 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RradSPS_R0028 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RradSPS_R0012 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RradSPS_R0006 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RradSPS_R0044 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RradSPS_R0041 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RradSPS_R0042 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RradSPS_R0037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RradSPS_R0035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RradSPS_R0029 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RradSPS_R0033 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RradSPS_R0036 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RradSPS_R0020 tRNA-Val K14237 tRNA-Val; tRNA Val
D RradSPS_R0039 tRNA-Val K14237 tRNA-Val; tRNA Val
D RradSPS_R0015 tRNA-Val K14237 tRNA-Val; tRNA Val
D RradSPS_R0030 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D RradSPS_1961 Glutamyl- and glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_0537 glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_2267 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_0718 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RradSPS_0719 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RradSPS_0717 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RradSPS_1363 alaS: alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RradSPS_2117 putative metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RradSPS_1355 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RradSPS_0648 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RradSPS_1275 thrS: threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RradSPS_1041 serS: serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RradSPS_1761 selA: L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D RradSPS_1960 cysS: cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RradSPS_0379 metG: methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RradSPS_1474 fmt: methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RradSPS_1545 valS: valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RradSPS_2761 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RradSPS_0548 ileS: isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RradSPS_1968 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RradSPS_1604 argS: arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RradSPS_1045 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RradSPS_1335 hisS: histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RradSPS_1281 pheS: phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RradSPS_1282 phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RradSPS_1287 tyrS: tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RradSPS_0136 trpS: tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rrd03060]
D RradSPS_1923 Preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D RradSPS_1956 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D RradSPS_1780 secG: preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D RradSPS_1328 secD: protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RradSPS_1329 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RradSPS_2770 Membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RradSPS_0497 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RradSPS_1561 secA: preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RradSPS_1393 ffh: signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RradSPS_1392 ftsY: signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RradSPS_2387 transport-energizing ATPase, TRC40/GET3/ArsA family K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RradSPS_1289 transport-energizing ATPase, TRC40/GET3/ArsA family K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RradSPS_1748 tatAE: twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D RradSPS_0991 mttA/Hcf106 family K03116 tatA; sec-independent protein translocase protein TatA
D RradSPS_1978 tatAE: twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D RradSPS_1765 mttA/Hcf106 family K03117 tatB; sec-independent protein translocase protein TatB
D RradSPS_1747 tatC: twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D RradSPS_1205 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RradSPS_0085 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RradSPS_0086 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RradSPS_2249 lspA: signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rrd04122]
D RradSPS_1357 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RradSPS_0091 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RradSPS_2444 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RradSPS_0885 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RradSPS_2028 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RradSPS_1358 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RradSPS_0390 moaD: molybdopterin converting factor, subunit 1 K21232 MOCS2A; molybdopterin synthase sulfur carrier subunit
D RradSPS_0389 Molybdopterin converting factor large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RradSPS_0971 moaA: molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RradSPS_2143 Molybdopterin converting factor small subunit K03636 moaD; sulfur-carrier protein
D RradSPS_2144 ThiF family K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D RradSPS_1759 moaC: molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RradSPS_1118 molybdenum cofactor synthesis domain K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rrd03018]
D RradSPS_0799 eno: phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RradSPS_1423 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RradSPS_1556 VacB and RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RradSPS_1184 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RradSPS_1597 rho: transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RradSPS_1430 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RradSPS_0989 Hypothetical Protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RradSPS_1425 putative hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RradSPS_1632 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RradSPS_0657 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RradSPS_0694 GroEL: chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RradSPS_0306 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RradSPS_2445 HDIG: uncharacterized domain HDIG K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RradSPS_0683 HD domain K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rrd03030]
D RradSPS_0254 dnaq: exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RradSPS_1055 polc: DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RradSPS_0464 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RradSPS_1740 ATPase involved in DNA replication K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RradSPS_1525 holA: DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RradSPS_0002 dnan: DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RradSPS_0739 DnaB: replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RradSPS_1509 dnaG: DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RradSPS_0055 ssb: single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RradSPS_0644 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RradSPS_1399 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RradSPS_0669 Ribonuclease HII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D RradSPS_1804 DNA polymerase family A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RradSPS_0101 dnlj: DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rrd03410]
D RradSPS_2320 nth: endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RradSPS_1110 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RradSPS_1285 Methylpurine-DNA glycosylase (MPG) K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RradSPS_0394 fpg: formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RradSPS_0540 fpg: formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RradSPS_2395 Formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D RradSPS_1169 HhH-GPD superfamily base excision DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RradSPS_0685 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RradSPS_2516 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RradSPS_0296 Uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RradSPS_1147 nfo: apurinic endonuclease (APN1) K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RradSPS_1804 DNA polymerase family A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RradSPS_0780 Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RradSPS_0101 dnlj: DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rrd03420]
D RradSPS_0797 mfd: transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RradSPS_1794 uvra: excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RradSPS_1800 uvrb: excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RradSPS_1788 uvrC: excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RradSPS_2545 UvrD-like helicase C-terminal domain K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RradSPS_0714 pcrA: ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RradSPS_1804 DNA polymerase family A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RradSPS_0101 dnlj: DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rrd03430]
D RradSPS_0158 mutS1: DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RradSPS_0036 mutl: DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RradSPS_0159 mutl: DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RradSPS_2545 UvrD-like helicase C-terminal domain K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RradSPS_0714 pcrA: ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RradSPS_0780 Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RradSPS_0055 ssb: single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RradSPS_1055 polc: DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RradSPS_0002 dnan: DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RradSPS_0464 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RradSPS_1525 holA: DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RradSPS_1740 ATPase involved in DNA replication K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RradSPS_0254 dnaq: exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RradSPS_0101 dnlj: DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rrd03440]
D RradSPS_0780 Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RradSPS_0055 ssb: single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RradSPS_0004 recf: DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RradSPS_1511 reco: DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RradSPS_0466 recR: recombination protein RecR K06187 recR; recombination protein RecR
D RradSPS_1428 protein RecA K03553 recA; recombination protein RecA
D RradSPS_1804 DNA polymerase family A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RradSPS_1317 ruvA: Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RradSPS_1318 ruvB: Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RradSPS_1316 ruvC: crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RradSPS_1377 recG: ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RradSPS_1055 polc: DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RradSPS_0002 dnan: DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RradSPS_0464 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RradSPS_1525 holA: DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RradSPS_1740 ATPase involved in DNA replication K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RradSPS_0254 dnaq: exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RradSPS_1476 Primosomal protein N' (replication factor Y) - superfamily II helicase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rrd02010]
D RradSPS_2434 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D RradSPS_2435 ABC-type nitrate/sulfonate/bicarbonate transport system permease component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D RradSPS_3065 modA: molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RradSPS_3066 NifC-like ABC-type porter K02018 modB; molybdate transport system permease protein
D RradSPS_1165 Bacterial extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RradSPS_1164 ABC-type Fe3+ transport system permease component K02011 afuB; iron(III) transport system permease protein
D RradSPS_1163 ABC-type spermidine/putrescine transport systems ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RradSPS_0646 Substrate binding domain of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RradSPS_0041 ABC-type proline/glycine betaine transport systems periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RradSPS_0042 ABC-type proline/glycine betaine transport systems periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RradSPS_0043 ABC-type proline/glycine betaine transport systems periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RradSPS_0645 ABC-type proline/glycine betaine transport systems periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RradSPS_0044 ABC-type proline/glycine betaine transport system permease component K02001 proW; glycine betaine/proline transport system permease protein
D RradSPS_0045 proV: glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RradSPS_2076 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D RradSPS_0893 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D RradSPS_2077 ABC-type proline/glycine betaine transport systems permease component K05846 opuBD; osmoprotectant transport system permease protein
D RradSPS_2079 ABC-type proline/glycine betaine transport systems permease component K05846 opuBD; osmoprotectant transport system permease protein
D RradSPS_0894 ABC-type proline/glycine betaine transport systems permease component K05846 opuBD; osmoprotectant transport system permease protein
D RradSPS_0895 ABC-type proline/glycine betaine transport systems permease component K05846 opuBD; osmoprotectant transport system permease protein
D RradSPS_2078 proV: glycine betaine/L-proline transport ATP binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RradSPS_0896 proV: glycine betaine/L-proline transport ATP binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RradSPS_1770 ABC-type sugar transport systems ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RradSPS_2677 Bacterial extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RradSPS_2306 Bacterial extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RradSPS_1769 Bacterial extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RradSPS_1979 ABC-type sugar transport system periplasmic component K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RradSPS_1768 ABC-type sugar transport systems permease component K10237 thuF; trehalose/maltose transport system permease protein
D RradSPS_1767 ABC-type sugar transport system permease component K10238 thuG; trehalose/maltose transport system permease protein
D RradSPS_0112 putative ABC-type transport system periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RradSPS_0110 ABC-type uncharacterized transport system permease component K23535 nupB; general nucleoside transport system permease protein
D RradSPS_0109 putative ABC-type transport system permease component K23536 nupC; general nucleoside transport system permease protein
D RradSPS_0111 ABC-type uncharacterized transport systems ATPase component K23537 nupA; general nucleoside transport system ATP-binding protein
D RradSPS_2461 ABC-type sugar transport system ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RradSPS_0701 Phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RradSPS_0702 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D RradSPS_0703 Phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D RradSPS_0704 Phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RradSPS_1020 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RradSPS_1018 PhnE: phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D RradSPS_1019 ABC-type phosphate/phosphonate transport system ATPase component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RradSPS_1812 ABC-type branched-chain amino acid transport systems periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RradSPS_1811 Branched-chain amino acid ABC-type transport system permease component K01997 livH; branched-chain amino acid transport system permease protein
D RradSPS_1810 ABC-type branched-chain amino acid transport system permease component K01998 livM; branched-chain amino acid transport system permease protein
D RradSPS_1809 ABC-type branched-chain amino acid transport systems ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RradSPS_1678 ABC-type branched-chain amino acid transport systems ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RradSPS_1808 ABC-type branched-chain amino acid transport systems ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RradSPS_0767 ABC-type oligopeptide transport system periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D RradSPS_0768 ABC-type dipeptide/oligopeptide/nickel transport systems permease component K15581 oppB; oligopeptide transport system permease protein
D RradSPS_0769 ABC-type dipeptide/oligopeptide/nickel transport systems permease component K15582 oppC; oligopeptide transport system permease protein
D RradSPS_0770 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D RradSPS_0771 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D RradSPS_2225 ABC-type metal ion transport system periplasmic component/surface adhesin K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D RradSPS_2223 ABC-type Mn2+/Zn2+ transport systems permease component K11708 troC; manganese/zinc/iron transport system permease protein
D RradSPS_2222 ABC-type Mn2+/Zn2+ transport systems permease component K11709 troD; manganese/zinc/iron transport system permease protein
D RradSPS_2224 ABC-type Mn/Zn transport systems ATPase component K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RradSPS_2644 ABC-type Co2+ transport system permease component K02007 cbiM; cobalt/nickel transport system permease protein
D RradSPS_2645 cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RradSPS_2646 ABC-type cobalt transport system ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RradSPS_2643 Carboxypeptidase regulatory-like domain K16915 cbiL; nickel transport protein
D RradSPS_2318 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D RradSPS_2953 Cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D RradSPS_1911 ABC-type cobalt transport system permease component CbiQ-related transporter K16785 ecfT; energy-coupling factor transport system permease protein
D RradSPS_1913 ABC-type cobalt transport system ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RradSPS_1912 ABC-type cobalt transport system ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RradSPS_1108 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D RradSPS_1109 ABC-type multidrug transport system ATPase component K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D RradSPS_1557 Cell division protein K09811 ftsX; cell division transport system permease protein
D RradSPS_1558 FtsE: cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RradSPS_1350 CydC: thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RradSPS_3069 CydC: thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RradSPS_1349 CydD: thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D RradSPS_3070 CydD: thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:rrd02060]
D RradSPS_1651 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RradSPS_1652 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D RradSPS_0354 Mannitol/fructose-specific phosphotransferase system IIA domain K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D RradSPS_0352 mtlA: PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D RradSPS_1644 Phosphotransferase system sorbitol-specific component IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D RradSPS_1643 Phosphotransferase system sorbitol-specific component IIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D RradSPS_1642 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D RradSPS_1653 PTS system, Fru family, IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RradSPS_1654 fruA: PTS system, fructose subfamily, IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D RradSPS_0518 1-PFK: hexose kinase, 1-phosphofructokinase family K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RradSPS_1655 1-PFK: hexose kinase, 1-phosphofructokinase family K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:rrd03070]
D RradSPS_1328 secD: protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RradSPS_1329 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RradSPS_1956 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D RradSPS_1780 secG: preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D RradSPS_1923 Preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D RradSPS_2770 Membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RradSPS_0497 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RradSPS_1561 secA: preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RradSPS_1392 ftsY: signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RradSPS_1393 ffh: signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RradSPS_1748 tatAE: twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D RradSPS_0991 mttA/Hcf106 family K03116 tatA; sec-independent protein translocase protein TatA
D RradSPS_1978 tatAE: twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D RradSPS_1765 mttA/Hcf106 family K03117 tatB; sec-independent protein translocase protein TatB
D RradSPS_1747 tatC: twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rrd02020]
D RradSPS_2451 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RradSPS_0325 Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RradSPS_0701 Phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RradSPS_2759 Trypsin-like serine proteases typically periplasmic K04771 degP; serine protease Do [EC:3.4.21.107]
D RradSPS_2247 Trypsin-like serine proteases typically periplasmic K04771 degP; serine protease Do [EC:3.4.21.107]
D RradSPS_2404 Trypsin-like peptidase domain K04771 degP; serine protease Do [EC:3.4.21.107]
D RradSPS_1403 RNA polymerase sigma factor, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D RradSPS_1072 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D RradSPS_1071 Tripartite tricarboxylate transporter TctB family K07794 tctB; putative tricarboxylic transport membrane protein
D RradSPS_1070 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D RradSPS_0250 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07669 mprA; two-component system, OmpR family, response regulator MprA
D RradSPS_0001 DnaA: chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RradSPS_2906 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D RradSPS_0266 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RradSPS_2252 Citrate lyase beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RradSPS_1125 ATP:dephospho-CoA triphosphoribosyl transferase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D RradSPS_1100 Malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RradSPS_0573 narG: nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D RradSPS_0574 narH: nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D RradSPS_0576 narI: respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D RradSPS_0575 narJ: nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D RradSPS_1120 GlnA: glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RradSPS_2751 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RradSPS_1714 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RradSPS_0604 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0424 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0855 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D RradSPS_2003 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D RradSPS_2440 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_2480 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_1193 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_0190 Cyclic nucleotide-binding domain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_0189 Cyclic nucleotide-binding domain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_0891 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RradSPS_1346 Cytochrome bd-type quinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RradSPS_3068 Cytochrome bd-type quinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RradSPS_0290 Bacterial Cytochrome Ubiquinol Oxidase K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RradSPS_1347 Cytochrome bd-type quinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RradSPS_3067 cydB: cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RradSPS_1863 Protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D RradSPS_1246 arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rrd02024]
D RradSPS_1902 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RradSPS_1880 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RradSPS_0374 Peptidase family M23 K08642 lasA; LasA protease [EC:3.4.24.-]
D RradSPS_0870 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RradSPS_2038 ABC-type uncharacterized transport system periplasmic component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RradSPS_2036 ABC-type spermidine/putrescine transport system permease component II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RradSPS_2037 ABC-type spermidine/putrescine transport system permease component I K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RradSPS_1812 ABC-type branched-chain amino acid transport systems periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RradSPS_1811 Branched-chain amino acid ABC-type transport system permease component K01997 livH; branched-chain amino acid transport system permease protein
D RradSPS_1810 ABC-type branched-chain amino acid transport system permease component K01998 livM; branched-chain amino acid transport system permease protein
D RradSPS_1809 ABC-type branched-chain amino acid transport systems ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RradSPS_1678 ABC-type branched-chain amino acid transport systems ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RradSPS_1808 ABC-type branched-chain amino acid transport systems ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RradSPS_2081 Metallo-beta-lactamase superfamily K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D RradSPS_2806 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_2083 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_0640 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_1842 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_2440 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_2480 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_1193 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_0190 Cyclic nucleotide-binding domain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_0189 Cyclic nucleotide-binding domain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_1370 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RradSPS_1116 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D RradSPS_1239 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D RradSPS_0767 ABC-type oligopeptide transport system periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D RradSPS_0768 ABC-type dipeptide/oligopeptide/nickel transport systems permease component K15581 oppB; oligopeptide transport system permease protein
D RradSPS_0769 ABC-type dipeptide/oligopeptide/nickel transport systems permease component K15582 oppC; oligopeptide transport system permease protein
D RradSPS_0770 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D RradSPS_0771 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D RradSPS_0774 Bacterial extracellular solute-binding protein, family 5 Middle K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RradSPS_1892 Bacterial extracellular solute-binding protein, family 5 Middle K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RradSPS_2770 Membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RradSPS_0497 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RradSPS_1956 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D RradSPS_1780 secG: preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D RradSPS_1923 Preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D RradSPS_1561 secA: preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RradSPS_1392 ftsY: signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RradSPS_1393 ffh: signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:rrd02040]
D RradSPS_0373 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D RradSPS_0506 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D RradSPS_1218 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D RradSPS_0963 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D RradSPS_0776 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D RradSPS_1403 RNA polymerase sigma factor, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RradSPS_0799 eno: phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rrd04980]
D RradSPS_2694 ATPcob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RradSPS_0419 lao: LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D RradSPS_0729 metH: methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rrd01501]
D RradSPS_1771 Beta-glucosidase-related glycosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RradSPS_0767 ABC-type oligopeptide transport system periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D RradSPS_0768 ABC-type dipeptide/oligopeptide/nickel transport systems permease component K15581 oppB; oligopeptide transport system permease protein
D RradSPS_0769 ABC-type dipeptide/oligopeptide/nickel transport systems permease component K15582 oppC; oligopeptide transport system permease protein
D RradSPS_0770 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D RradSPS_0771 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D RradSPS_2347 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RradSPS_0421 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RradSPS_1638 Beta-lactamase enzyme family K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RradSPS_1098 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RradSPS_1286 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RradSPS_0504 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RradSPS_1131 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RradSPS_1505 Cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rrd01502]
D RradSPS_0478 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RradSPS_0294 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RradSPS_0681 alr: alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RradSPS_1504 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RradSPS_1503 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RradSPS_1500 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RradSPS_0266 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rrd01503]
D RradSPS_0521 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RradSPS_2759 Trypsin-like serine proteases typically periplasmic K04771 degP; serine protease Do [EC:3.4.21.107]
D RradSPS_2247 Trypsin-like serine proteases typically periplasmic K04771 degP; serine protease Do [EC:3.4.21.107]
D RradSPS_2404 Trypsin-like peptidase domain K04771 degP; serine protease Do [EC:3.4.21.107]
D RradSPS_2906 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rrd01000]
C 01001 Protein kinases [BR:rrd01001]
D RradSPS_0029 Protein kinase domain K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RradSPS_2157 Protein kinase domain K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RradSPS_2158 Protein kinase domain K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RradSPS_2529 Protein kinase domain K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RradSPS_0023 Protein kinase domain K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RradSPS_0263 Anti-sigma regulatory factor (Ser/Thr protein kinase) K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RradSPS_1728 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RradSPS_2588 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RradSPS_2898 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rrd01009]
D RradSPS_2985 S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RradSPS_1777 S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RradSPS_1632 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RradSPS_0026 Protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:rrd01002]
D RradSPS_2249 lspA: signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RradSPS_0852 Type II secretory pathway prepilin signal peptidase PulO and related peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RradSPS_0697 GMP synthase (glutamine-hydrolyzing), C-terminal domain K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RradSPS_2750 putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D RradSPS_1742 putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D RradSPS_1894 NlpC/P60 family K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D RradSPS_0261 NlpC/P60 family K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D RradSPS_2221 Hypothetical Protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D RradSPS_0912 purF: amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RradSPS_2554 Conserved region in glutamate synthase K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D RradSPS_0674 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RradSPS_2071 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RradSPS_3012 PfpI: intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D RradSPS_1185 Putative intracellular protease/amidase K05520 yhbO; deglycase [EC:3.5.1.124]
D RradSPS_2443 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_0408 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_1111 Sortase family K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_1130 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_2317 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_0093 Sortase family K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_0302 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_0310 Sortase family K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_0551 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_1608 Sortase family K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_1630 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_0386 CAAX protease self-immunity K07052 K07052; CAAX protease family protein
D RradSPS_2651 CAAX protease self-immunity K07052 K07052; CAAX protease family protein
D RradSPS_2735 Peptidase family M3 K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D RradSPS_0266 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RradSPS_2146 Zn-dependent dipeptidase microsomal dipeptidase like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RradSPS_2501 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D RradSPS_1837 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D RradSPS_1576 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RradSPS_2676 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RradSPS_2467 aa-his-dipept: Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RradSPS_1674 amidohydrolases: amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D RradSPS_1307 hydantase: amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9]
D RradSPS_0069 hydantase: amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9]
D RradSPS_0374 Peptidase family M23 K08642 lasA; LasA protease [EC:3.4.24.-]
D RradSPS_2147 Peptidase family M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D RradSPS_1921 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RradSPS_2276 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RradSPS_1159 Leucyl aminopeptidase (aminopeptidase T) K19689 ampS; aminopeptidase [EC:3.4.11.-]
D RradSPS_1084 Zn-dependent carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D RradSPS_1972 ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RradSPS_0124 Zn-dependent protease with chaperone function K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RradSPS_1411 TIGR00054: RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RradSPS_0832 Protease prsW family K24131 prsW; protease PrsW [EC:3.4.-.-]
D RradSPS_2893 Protease prsW family K24131 prsW; protease PrsW [EC:3.4.-.-]
D RradSPS_2759 Trypsin-like serine proteases typically periplasmic K04771 degP; serine protease Do [EC:3.4.21.107]
D RradSPS_2247 Trypsin-like serine proteases typically periplasmic K04771 degP; serine protease Do [EC:3.4.21.107]
D RradSPS_2404 Trypsin-like peptidase domain K04771 degP; serine protease Do [EC:3.4.21.107]
D RradSPS_2760 Trypsin-like serine proteases typically periplasmic K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D RradSPS_3123 Subtilase family K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D RradSPS_0222 Subtilisin-like serine protease K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D RradSPS_1976 Subtilisin-like serine protease K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D RradSPS_0516 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RradSPS_1547 Protease subunit of ATP-dependent Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RradSPS_1205 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RradSPS_0085 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RradSPS_0086 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RradSPS_2259 Alpha/beta hydrolase family K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RradSPS_1693 putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-]
D RradSPS_0775 prc: C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RradSPS_1779 Protein related to penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RradSPS_2171 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D RradSPS_1189 Peptidase family S49 K04773 sppA; protease IV [EC:3.4.21.-]
D RradSPS_1007 putative proteins homologs of microcin C7 resistance protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RradSPS_1245 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RradSPS_2270 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RradSPS_2483 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RradSPS_3054 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 01003 Glycosyltransferases [BR:rrd01003]
D RradSPS_0667 Glycosyl transferase family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D RradSPS_0381 Glycosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D RradSPS_0753 Glycosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D RradSPS_1098 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RradSPS_1286 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RradSPS_0504 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RradSPS_2336 glycosyltransferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RradSPS_2287 Protein of unknown function (DUF2029) K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D RradSPS_1814 Dolichyl-phosphate-mannose-protein mannosyltransferase K14340 K14340; mannosyltransferase [EC:2.4.1.-]
D RradSPS_1688 Hypothetical Protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D RradSPS_0264 Trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D RradSPS_0500 Glycosyl transferase family 2 K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rrd01005]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rrd01011]
D RradSPS_1577 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RradSPS_2449 murB: UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RradSPS_1499 murC: UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RradSPS_1502 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RradSPS_0507 murE: UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RradSPS_0478 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RradSPS_0294 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RradSPS_0681 alr: alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RradSPS_1554 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RradSPS_1007 putative proteins homologs of microcin C7 resistance protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RradSPS_1503 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RradSPS_1500 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RradSPS_3036 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RradSPS_1222 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RradSPS_0530 mviN: integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RradSPS_1098 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RradSPS_1286 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RradSPS_0504 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RradSPS_1131 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RradSPS_1505 Cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RradSPS_0024 Cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D RradSPS_0516 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RradSPS_0266 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RradSPS_2147 Peptidase family M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D RradSPS_0261 NlpC/P60 family K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D RradSPS_2221 Hypothetical Protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D RradSPS_2443 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_0408 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_1111 Sortase family K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_1130 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_2317 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_0093 Sortase family K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_0302 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_0310 Sortase family K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_0551 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_1608 Sortase family K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_1630 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RradSPS_1801 Transglycosylase SLT domain K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RradSPS_1365 TIGR00247: conserved hypothetical protein, YceG family K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RradSPS_2138 rlpA: rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RradSPS_0188 Rare lipoprotein A (RlpA)-like double-psi beta-barrel K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RradSPS_0881 rlpA: rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RradSPS_0521 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rrd01004]
D RradSPS_1385 (acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RradSPS_0242 (acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RradSPS_1384 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RradSPS_1389 fabF: beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RradSPS_1040 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RradSPS_2980 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_0599 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_1387 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_0625 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_1154 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_2857 Short-chain alcohol dehydrogenase of unknown specificity K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RradSPS_1386 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RradSPS_2093 GDSL-like Lipase/Acylhydrolase family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RradSPS_0742 Enoyl-acyl-carrier-protein K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118]
D RradSPS_0746 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RradSPS_1624 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RradSPS_0618 acetoacetate-CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RradSPS_0423 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01896 ACSM; medium-chain acyl-CoA synthetase [EC:6.2.1.2]
D RradSPS_2806 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_2083 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_0640 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_1842 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_1637 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RradSPS_1383 plsX: fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RradSPS_1898 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RradSPS_1445 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rrd01008]
D RradSPS_0951 putative naringenin-chalcone synthase K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D RradSPS_0569 Cupin domain K14673 whiEII; putative monooxygenase
D RradSPS_0950 hypothetical protein K16168 bpsB; methyltransferase
D RradSPS_0847 Flavin reductase like domain K21185 sgcE6; flavin reductase
C 01006 Prenyltransferases [BR:rrd01006]
D RradSPS_1462 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RradSPS_1408 uppS: di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RradSPS_0731 Phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RradSPS_1434 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RradSPS_1746 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:rrd01007]
D RradSPS_1968 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RradSPS_1961 Glutamyl- and glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_0537 glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_2267 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_1287 tyrS: tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RradSPS_0136 trpS: tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RradSPS_1960 cysS: cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RradSPS_1604 argS: arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RradSPS_0379 metG: methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RradSPS_0548 ileS: isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RradSPS_1545 valS: valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RradSPS_2761 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RradSPS_1355 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RradSPS_1335 hisS: histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RradSPS_0648 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RradSPS_1041 serS: serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RradSPS_1045 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RradSPS_1275 thrS: threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RradSPS_1363 alaS: alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RradSPS_2117 putative metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RradSPS_1281 pheS: phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RradSPS_1282 phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RradSPS_1685 Aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RradSPS_2674 DapC: succinyldiaminopimelate transaminase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D RradSPS_2159 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RradSPS_0828 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RradSPS_2787 7-keto-8-aminopelargonate synthetase-related enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RradSPS_2300 argD: transaminase, acetylornithine/succinylornithine family K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RradSPS_0350 GABAtrnsam: 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RradSPS_0068 4-aminobutyrate aminotransferase and related aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RradSPS_2821 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D RradSPS_1753 hemL: glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RradSPS_0217 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450 [BR:rrd00199]
D RradSPS_2371 Cytochrome P450 K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:rrd00194]
D RradSPS_2368 Ferredoxin K02639 petF; ferredoxin
D RradSPS_1578 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RradSPS_1579 atpD: ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RradSPS_1580 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RradSPS_1581 atpA: ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RradSPS_1582 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RradSPS_1583 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RradSPS_1584 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RradSPS_1585 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RradSPS_1587 Putative F0F1-ATPase subunit (ATPase_gene1) K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rrd03000]
D RradSPS_2830 Helix-turn-helix domain K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D RradSPS_1828 Helix-turn-helix domain K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D RradSPS_1857 Transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D RradSPS_1021 Transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RradSPS_2024 Transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D RradSPS_1656 Transcriptional regulators of sugar metabolism K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D RradSPS_2828 Bacterial regulatory protein, gntR family K03710 K03710; GntR family transcriptional regulator
D RradSPS_2753 Transcriptional regulators K03710 K03710; GntR family transcriptional regulator
D RradSPS_0790 Bacterial regulatory protein, gntR family K07978 plmA; GntR family transcriptional regulator
D RradSPS_0626 Transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RradSPS_3008 Transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D RradSPS_0890 MerR HTH family regulatory protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RradSPS_0660 MerR HTH family regulatory protein K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D RradSPS_2739 TipAS antibiotic-recognition domain K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D RradSPS_1133 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RradSPS_1144 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RradSPS_1192 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RradSPS_2641 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RradSPS_1188 Fe2+/Zn2+ uptake regulation protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D RradSPS_1310 Transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D RradSPS_2440 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_2480 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_1193 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_0190 Cyclic nucleotide-binding domain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_0189 Cyclic nucleotide-binding domain K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RradSPS_1221 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K21561 ntcA; CRP/FNR family transcriptional regulator, global nitrogen regulator
D RradSPS_0751 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K21561 ntcA; CRP/FNR family transcriptional regulator, global nitrogen regulator
D RradSPS_0706 Rrf2 family protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RradSPS_0570 Rrf2 family protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D RradSPS_3004 Bacterial regulatory protein, arsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RradSPS_2877 Bacterial regulatory protein, arsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D RradSPS_3147 Bacterial regulatory protein, arsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D RradSPS_0601 poly-beta-hydroxybutyrate-responsive repressor K10947 K10947; PadR family transcriptional regulator
D RradSPS_1841 putative transcriptional regulators K10947 K10947; PadR family transcriptional regulator
D RradSPS_2226 Iron dependent repressor, metal binding and dimerization domain K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RradSPS_0470 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RradSPS_2738 AT-rich DNA-binding protein K01926 rex; redox-sensing transcriptional repressor
D RradSPS_2776 Ribbon-helix-helix protein, copG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D RradSPS_0353 PRD domain K03483 mtlR; mannitol operon transcriptional activator
D RradSPS_0508 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RradSPS_1696 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RradSPS_2766 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RradSPS_0901 ParB-like nuclease domain K23371 sbnI; L-serine kinase (ATP) / ParB family transcriptional regulator, heme-responsive regulator [EC:2.7.1.225]
D RradSPS_1022 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) K02443 glpP; glycerol uptake operon antiterminator
D RradSPS_2296 Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D RradSPS_1522 hrcA: heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RradSPS_2426 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D RradSPS_0582 Putative transcription activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D RradSPS_0684 Putative stress-responsive transcriptional regulator K03973 pspC; phage shock protein C
D RradSPS_2473 Transcriptional regulator contains sigma factor-related N-terminal domain K05346 deoR; deoxyribonucleoside regulator
D RradSPS_1488 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RradSPS_1288 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D RradSPS_2291 TIGR00244: transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D RradSPS_1508 TIGR00242: protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rrd03021]
D RradSPS_1915 rpoA: DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RradSPS_1950 rpoB: DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RradSPS_1949 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RradSPS_1479 rpoZ: DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RradSPS_0373 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D RradSPS_0506 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D RradSPS_1218 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D RradSPS_0963 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D RradSPS_0776 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D RradSPS_0274 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RradSPS_1611 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RradSPS_2525 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RradSPS_3042 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RradSPS_1362 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily K03090 sigB; RNA polymerase sigma-B factor
D RradSPS_0860 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family K03090 sigB; RNA polymerase sigma-B factor
D RradSPS_1403 RNA polymerase sigma factor, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D RradSPS_1415 NusA: transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RradSPS_1463 nusB: transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RradSPS_1955 nusG: transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D RradSPS_1625 Stage II sporulation protein E (SpoIIE) K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D RradSPS_1626 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D RradSPS_0263 Anti-sigma regulatory factor (Ser/Thr protein kinase) K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RradSPS_1288 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D RradSPS_1969 greA: transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RradSPS_1597 rho: transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rrd03019]
D RradSPS_1390 dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RradSPS_1425 putative hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RradSPS_1430 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RradSPS_0989 Hypothetical Protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RradSPS_1556 VacB and RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RradSPS_1766 HDIG: uncharacterized domain HDIG K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D RradSPS_1184 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RradSPS_0799 eno: phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RradSPS_1423 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RradSPS_1597 rho: transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RradSPS_1632 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RradSPS_0657 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RradSPS_0694 GroEL: chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RradSPS_0306 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RradSPS_2445 HDIG: uncharacterized domain HDIG K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RradSPS_0683 HD domain K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RradSPS_2115 NOT-MenG: RraA family K02553 rraA; regulator of ribonuclease activity A
D RradSPS_1787 putative P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:rrd03011]
D RradSPS_1803 S1 RNA binding domain K02945 RP-S1; small subunit ribosomal protein S1
D RradSPS_1404 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RradSPS_1937 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RradSPS_1916 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RradSPS_1926 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RradSPS_0736 S6: ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RradSPS_1947 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RradSPS_1929 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RradSPS_1907 Ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RradSPS_1944 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RradSPS_1917 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RradSPS_1948 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RradSPS_1918 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RradSPS_1930 Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RradSPS_1422 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RradSPS_1394 S16: ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RradSPS_1934 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RradSPS_0737 S18: ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RradSPS_1939 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RradSPS_1524 S20: ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RradSPS_1953 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RradSPS_1940 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RradSPS_1943 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RradSPS_1942 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RradSPS_1931 Ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RradSPS_1928 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RradSPS_0738 L9: ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RradSPS_1952 Ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RradSPS_1954 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RradSPS_1951 L12: ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RradSPS_1908 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RradSPS_1933 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RradSPS_1924 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RradSPS_1936 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RradSPS_1914 L17: ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RradSPS_1927 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RradSPS_1398 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RradSPS_1532 L21: ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RradSPS_1938 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RradSPS_1941 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RradSPS_1932 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RradSPS_1531 L27: ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RradSPS_1374 L28: ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RradSPS_1935 L29: ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RradSPS_1925 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RradSPS_1596 L31: ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RradSPS_1382 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RradSPS_1142 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RradSPS_1278 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RradSPS_1919 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RradSPS_0788 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D RradSPS_R0049 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rrd03009]
D RradSPS_1390 dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RradSPS_1513 era: GTP-binding protein Era K03595 era; GTPase
D RradSPS_1530 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D RradSPS_1288 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D RradSPS_1415 NusA: transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RradSPS_1463 nusB: transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RradSPS_1955 nusG: transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D RradSPS_0784 ksgA: dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RradSPS_1378 TIGR00095: RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RradSPS_1520 TIGR00046: RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RradSPS_2768 gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RradSPS_1507 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RradSPS_0782 TIGR00096: putative S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RradSPS_1461 tly: hemolysin TlyA family protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RradSPS_1959 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RradSPS_1606 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RradSPS_0733 putative SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RradSPS_2359 TIGR00048: 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RradSPS_1448 TIGR00093: pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RradSPS_1489 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RradSPS_0688 rimI: ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RradSPS_1396 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RradSPS_2399 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D RradSPS_1364 RNAse H domain protein, YqgF family K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RradSPS_1444 ribosome-associated GTPase EngA K03977 engA; GTPase
D RradSPS_1435 GTP-binding protein HflX K03665 hflX; GTPase
D RradSPS_1592 Putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RradSPS_1332 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RradSPS_1418 rbfA: ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RradSPS_1414 Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D RradSPS_0003 hypothetical protein K14761 rlbA; ribosome-associated protein
D RradSPS_1528 iojap-like ribosome-associated protein K09710 ybeB; ribosome-associated protein
D RradSPS_1516 TIGR00043: probable rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor
D RradSPS_1562 yfiA: ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D RradSPS_1993 TIGR00092: GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D RradSPS_1381 putative metal-binding possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rrd03016]
D RradSPS_1961 Glutamyl- and glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_0537 glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_2267 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_1045 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RradSPS_0548 ileS: isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RradSPS_2761 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RradSPS_0379 metG: methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RradSPS_1604 argS: arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RradSPS_1355 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RradSPS_1363 alaS: alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RradSPS_2117 putative metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RradSPS_0648 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RradSPS_1275 thrS: threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RradSPS_1041 serS: serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RradSPS_1960 cysS: cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RradSPS_1545 valS: valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RradSPS_1335 hisS: histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RradSPS_1281 pheS: phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RradSPS_1282 phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RradSPS_1287 tyrS: tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RradSPS_0136 trpS: tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RradSPS_0525 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RradSPS_2148 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RradSPS_1807 putative S-adenosylmethionine-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RradSPS_2647 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D RradSPS_1910 tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RradSPS_1420 TruB: tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RradSPS_1357 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RradSPS_0091 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RradSPS_1592 Putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RradSPS_1434 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RradSPS_1016 selD: selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RradSPS_2771 rnpA: ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RradSPS_0309 2'-5' RNA ligase superfamily K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D RradSPS_1968 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RradSPS_2292 Cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RradSPS_2164 Cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RradSPS_1433 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RradSPS_0139 Methyltransferase domain K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D RradSPS_0475 tRNAm(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RradSPS_1397 trmD: tRNA (guanine(37)-N(1))-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RradSPS_1280 SpoU rRNA Methylase family K03437 spoU; RNA methyltransferase, TrmH family
D RradSPS_1358 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RradSPS_2719 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D RradSPS_1326 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RradSPS_2120 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RradSPS_2733 TIGR00276: epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D RradSPS_1327 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RradSPS_1975 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RradSPS_0687 tRNA threonylcarbamoyl adenosine modification protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RradSPS_0691 tRNA threonylcarbamoyl adenosine modification protein YgjD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RradSPS_0686 tRNA threonylcarbamoyl adenosine modification protein YjeE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RradSPS_1556 VacB and RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RradSPS_1423 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RradSPS_1319 putative nucleic acid-binding protein contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D RradSPS_2798 putative nucleic acid-binding protein contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:rrd03012]
D RradSPS_1416 IF-2: translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RradSPS_1276 infC: translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RradSPS_0523 ATPase component of ABC transporter with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RradSPS_1405 tsf: translation elongation factor Ts K02357 tsf; elongation factor Ts
D RradSPS_1945 EF-Tu: translation elongation factor Tu K02358 tuf; elongation factor Tu
D RradSPS_1957 EF-Tu: translation elongation factor Tu K02358 tuf; elongation factor Tu
D RradSPS_0499 Translation elongation factors (GTPases) K02355 fusA; elongation factor G
D RradSPS_1946 EF-G: translation elongation factor G K02355 fusA; elongation factor G
D RradSPS_1760 selB: selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D RradSPS_1594 prfA: peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RradSPS_1407 frr: ribosome recycling factor K02838 frr; ribosome recycling factor
D RradSPS_1593 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RradSPS_0789 pth: peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RradSPS_1920 infA: translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RradSPS_1464 efp: translation elongation factor P K02356 efp; elongation factor P
D RradSPS_1560 prfB: peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D RradSPS_2455 prfC: peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:rrd03110]
D RradSPS_0399 ATPases with chaperone activity ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RradSPS_1967 ATPases with chaperone activity ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RradSPS_0166 ATPases with chaperone activity ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RradSPS_1546 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RradSPS_0657 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RradSPS_0694 GroEL: chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RradSPS_2734 DnaJ domain K03686 dnaJ; molecular chaperone DnaJ
D RradSPS_1521 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RradSPS_0659 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RradSPS_0658 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D RradSPS_2479 Molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein
D RradSPS_2999 Molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein
D RradSPS_0398 Molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein
D RradSPS_2375 Molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein
D RradSPS_0520 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D RradSPS_2759 Trypsin-like serine proteases typically periplasmic K04771 degP; serine protease Do [EC:3.4.21.107]
D RradSPS_2247 Trypsin-like serine proteases typically periplasmic K04771 degP; serine protease Do [EC:3.4.21.107]
D RradSPS_2404 Trypsin-like peptidase domain K04771 degP; serine protease Do [EC:3.4.21.107]
D RradSPS_1972 ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RradSPS_1585 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RradSPS_3123 Subtilase family K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D RradSPS_0222 Subtilisin-like serine protease K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D RradSPS_1976 Subtilisin-like serine protease K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D RradSPS_0798 PPIC-type PPIASE domain K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RradSPS_0519 thioredoxin: thioredoxin K03671 TXN; thioredoxin
D RradSPS_1230 Glutathione S-transferase, N-terminal domain K03676 grxC; glutaredoxin 3
D RradSPS_3087 Glutaredoxin-related protein K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:rrd04131]
D RradSPS_1541 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RradSPS_2387 transport-energizing ATPase, TRC40/GET3/ArsA family K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RradSPS_1289 transport-energizing ATPase, TRC40/GET3/ArsA family K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RradSPS_0410 Fructose-16-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RradSPS_1783 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RradSPS_0800 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RradSPS_2808 Permeases of the major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family
D RradSPS_2220 Permeases of the major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:rrd04121]
C 03051 Proteasome [BR:rrd03051]
D RradSPS_2548 putative transcriptional regulator K13572 pafB; proteasome accessory factor B
D RradSPS_2547 putative transcriptional regulator K13573 pafC; proteasome accessory factor C
C 03032 DNA replication proteins [BR:rrd03032]
D RradSPS_0644 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RradSPS_0512 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RradSPS_0001 DnaA: chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RradSPS_0739 DnaB: replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RradSPS_0052 DNA replication protein K02315 dnaC; DNA replication protein DnaC
D RradSPS_1509 dnaG: DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RradSPS_0055 ssb: single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RradSPS_1055 polc: DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RradSPS_0002 dnan: DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RradSPS_1525 holA: DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RradSPS_1740 ATPase involved in DNA replication K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RradSPS_0254 dnaq: exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RradSPS_0464 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RradSPS_1399 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RradSPS_0669 Ribonuclease HII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D RradSPS_1804 DNA polymerase family A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RradSPS_0101 dnlj: DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RradSPS_0006 gyrA: DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RradSPS_0005 gyrB: DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RradSPS_1743 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RradSPS_2134 topB: DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rrd03036]
D RradSPS_1390 dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RradSPS_0410 Fructose-16-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RradSPS_0512 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RradSPS_0001 DnaA: chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RradSPS_1391 Chromosome segregation ATPase K03529 smc; chromosome segregation protein
D RradSPS_1450 hypothetical protein K05896 scpA; segregation and condensation protein A
D RradSPS_1449 putative transcriptional regulator containing the HTH domain K06024 scpB; segregation and condensation protein B
D RradSPS_1497 ftsA: cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RradSPS_0801 Septum formation initiator K05589 ftsB; cell division protein FtsB
D RradSPS_1506 Hypothetical Protein K13052 divIC; cell division protein DivIC
D RradSPS_1558 FtsE: cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RradSPS_1505 Cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RradSPS_1426 DNA segregation ATPase FtsK/SpoIIIE-related protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RradSPS_1501 Bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW
D RradSPS_1557 Cell division protein K09811 ftsX; cell division transport system permease protein
D RradSPS_1496 ftsZ: cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RradSPS_0521 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RradSPS_1490 DivIVA domain K04074 divIVA; cell division initiation protein
D RradSPS_1493 hypothetical protein K09772 sepF; cell division inhibitor SepF
D RradSPS_1538 mreB: cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D RradSPS_1537 Cell shape-determining protein K03570 mreC; rod shape-determining protein MreC
D RradSPS_1535 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D RradSPS_3119 CobQ/CobB/MinD/ParA nucleotide binding domain K03496 parA; chromosome partitioning protein
D RradSPS_2925 CobQ/CobB/MinD/ParA nucleotide binding domain K03496 parA; chromosome partitioning protein
D RradSPS_3014 CobQ/CobB/MinD/ParA nucleotide binding domain K03496 parA; chromosome partitioning protein
D RradSPS_2767 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D RradSPS_2199 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D RradSPS_2766 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RradSPS_2768 gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RradSPS_0475 tRNAm(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RradSPS_2839 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D RradSPS_1438 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D RradSPS_3143 Phage integrase family K04763 xerD; integrase/recombinase XerD
D RradSPS_1260 ParA/MinD ATPase like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RradSPS_1784 Sporulation regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:rrd03400]
D RradSPS_2196 FAD binding domain of DNA photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RradSPS_1110 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RradSPS_1285 Methylpurine-DNA glycosylase (MPG) K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RradSPS_2320 nth: endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RradSPS_2167 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RradSPS_1263 NUDIX domain K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RradSPS_0387 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RradSPS_2428 NUDIX domain K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RradSPS_0380 dut: dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RradSPS_0685 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RradSPS_2516 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RradSPS_0296 Uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RradSPS_1169 HhH-GPD superfamily base excision DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RradSPS_0394 fpg: formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RradSPS_0540 fpg: formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RradSPS_2395 Formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D RradSPS_1147 nfo: apurinic endonuclease (APN1) K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RradSPS_0550 Deoxyinosine 3'endonuclease (endonuclease V) K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D RradSPS_0780 Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RradSPS_0101 dnlj: DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RradSPS_1804 DNA polymerase family A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RradSPS_1794 uvra: excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RradSPS_1800 uvrb: excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RradSPS_1788 uvrC: excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RradSPS_2545 UvrD-like helicase C-terminal domain K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RradSPS_0714 pcrA: ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RradSPS_1950 rpoB: DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RradSPS_1949 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RradSPS_1915 rpoA: DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RradSPS_1479 rpoZ: DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RradSPS_0797 mfd: transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RradSPS_0158 mutS1: DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RradSPS_0036 mutl: DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RradSPS_0159 mutl: DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RradSPS_1055 polc: DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RradSPS_0002 dnan: DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RradSPS_1525 holA: DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RradSPS_1740 ATPase involved in DNA replication K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RradSPS_0254 dnaq: exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RradSPS_0464 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RradSPS_0055 ssb: single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RradSPS_1428 protein RecA K03553 recA; recombination protein RecA
D RradSPS_1317 ruvA: Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RradSPS_1318 ruvB: Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RradSPS_1316 ruvC: crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RradSPS_1476 Primosomal protein N' (replication factor Y) - superfamily II helicase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RradSPS_2356 RecF/RecN/SMC N terminal domain K03546 sbcC; DNA repair protein SbcC/Rad50
D RradSPS_2355 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D RradSPS_1965 sms: DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RradSPS_0004 recf: DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RradSPS_1377 recG: ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RradSPS_1511 reco: DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RradSPS_0466 recR: recombination protein RecR K06187 recR; recombination protein RecR
D RradSPS_1459 recN: DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RradSPS_2964 cas1: CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D RradSPS_1082 CRISPR-associated endonuclease Cas1, subtype I-C/DVULG K15342 cas1; CRISP-associated protein Cas1
D RradSPS_0006 gyrA: DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RradSPS_0005 gyrB: DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RradSPS_1743 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RradSPS_0512 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RradSPS_1184 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RradSPS_1429 hypothetical protein K03565 recX; regulatory protein
D RradSPS_0076 PHP domain K02347 polX; DNA polymerase (family X)
D RradSPS_2290 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RradSPS_1419 Exopolyphosphatase-related protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:rrd03029]
D RradSPS_1416 IF-2: translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RradSPS_1276 infC: translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RradSPS_1405 tsf: translation elongation factor Ts K02357 tsf; elongation factor Ts
D RradSPS_1945 EF-Tu: translation elongation factor Tu K02358 tuf; elongation factor Tu
D RradSPS_1957 EF-Tu: translation elongation factor Tu K02358 tuf; elongation factor Tu
D RradSPS_0499 Translation elongation factors (GTPases) K02355 fusA; elongation factor G
D RradSPS_1946 EF-G: translation elongation factor G K02355 fusA; elongation factor G
D RradSPS_1513 era: GTP-binding protein Era K03595 era; GTPase
D RradSPS_1287 tyrS: tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RradSPS_2761 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RradSPS_1355 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RradSPS_0648 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RradSPS_1604 argS: arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RradSPS_0718 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RradSPS_0719 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RradSPS_0717 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RradSPS_0055 ssb: single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RradSPS_0657 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RradSPS_0658 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D RradSPS_0694 GroEL: chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RradSPS_0520 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D RradSPS_2734 DnaJ domain K03686 dnaJ; molecular chaperone DnaJ
D RradSPS_1521 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RradSPS_0659 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RradSPS_1357 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RradSPS_0091 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RradSPS_1260 ParA/MinD ATPase like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RradSPS_2770 Membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RradSPS_0497 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rrd02000]
D RradSPS_2413 ABC-type multidrug transport system ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RradSPS_2703 ABC-type multidrug transport system ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RradSPS_2181 ABC-type multidrug transport system ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RradSPS_2699 ABC-type multidrug transport system ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RradSPS_2180 ABC-type multidrug transport system ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RradSPS_1350 CydC: thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RradSPS_3069 CydC: thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RradSPS_1349 CydD: thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D RradSPS_3070 CydD: thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D RradSPS_3065 modA: molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RradSPS_3066 NifC-like ABC-type porter K02018 modB; molybdate transport system permease protein
D RradSPS_1165 Bacterial extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RradSPS_1164 ABC-type Fe3+ transport system permease component K02011 afuB; iron(III) transport system permease protein
D RradSPS_1163 ABC-type spermidine/putrescine transport systems ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RradSPS_2038 ABC-type uncharacterized transport system periplasmic component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RradSPS_2036 ABC-type spermidine/putrescine transport system permease component II K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RradSPS_2037 ABC-type spermidine/putrescine transport system permease component I K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RradSPS_0646 Substrate binding domain of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RradSPS_0041 ABC-type proline/glycine betaine transport systems periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RradSPS_0042 ABC-type proline/glycine betaine transport systems periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RradSPS_0043 ABC-type proline/glycine betaine transport systems periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RradSPS_0645 ABC-type proline/glycine betaine transport systems periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RradSPS_0044 ABC-type proline/glycine betaine transport system permease component K02001 proW; glycine betaine/proline transport system permease protein
D RradSPS_0045 proV: glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RradSPS_2076 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D RradSPS_0893 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D RradSPS_2077 ABC-type proline/glycine betaine transport systems permease component K05846 opuBD; osmoprotectant transport system permease protein
D RradSPS_2079 ABC-type proline/glycine betaine transport systems permease component K05846 opuBD; osmoprotectant transport system permease protein
D RradSPS_0894 ABC-type proline/glycine betaine transport systems permease component K05846 opuBD; osmoprotectant transport system permease protein
D RradSPS_0895 ABC-type proline/glycine betaine transport systems permease component K05846 opuBD; osmoprotectant transport system permease protein
D RradSPS_2078 proV: glycine betaine/L-proline transport ATP binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RradSPS_0896 proV: glycine betaine/L-proline transport ATP binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RradSPS_2434 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D RradSPS_2435 ABC-type nitrate/sulfonate/bicarbonate transport system permease component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D RradSPS_1770 ABC-type sugar transport systems ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RradSPS_2677 Bacterial extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RradSPS_2306 Bacterial extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RradSPS_1769 Bacterial extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RradSPS_1979 ABC-type sugar transport system periplasmic component K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RradSPS_1768 ABC-type sugar transport systems permease component K10237 thuF; trehalose/maltose transport system permease protein
D RradSPS_1767 ABC-type sugar transport system permease component K10238 thuG; trehalose/maltose transport system permease protein
D RradSPS_2461 ABC-type sugar transport system ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RradSPS_0112 putative ABC-type transport system periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RradSPS_0110 ABC-type uncharacterized transport system permease component K23535 nupB; general nucleoside transport system permease protein
D RradSPS_0109 putative ABC-type transport system permease component K23536 nupC; general nucleoside transport system permease protein
D RradSPS_0111 ABC-type uncharacterized transport systems ATPase component K23537 nupA; general nucleoside transport system ATP-binding protein
D RradSPS_0902 ABC-type sugar transport system periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RradSPS_1826 Bacterial extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RradSPS_1825 ABC-type sugar transport systems permease component K02025 ABC.MS.P; multiple sugar transport system permease protein
D RradSPS_1824 ABC-type sugar transport system permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RradSPS_2460 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component K02057 ABC.SS.P; simple sugar transport system permease protein
D RradSPS_0701 Phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RradSPS_0702 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D RradSPS_0703 Phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D RradSPS_0704 Phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RradSPS_1020 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RradSPS_1018 PhnE: phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D RradSPS_1019 ABC-type phosphate/phosphonate transport system ATPase component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RradSPS_1812 ABC-type branched-chain amino acid transport systems periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RradSPS_1811 Branched-chain amino acid ABC-type transport system permease component K01997 livH; branched-chain amino acid transport system permease protein
D RradSPS_1810 ABC-type branched-chain amino acid transport system permease component K01998 livM; branched-chain amino acid transport system permease protein
D RradSPS_1809 ABC-type branched-chain amino acid transport systems ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RradSPS_1678 ABC-type branched-chain amino acid transport systems ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RradSPS_1808 ABC-type branched-chain amino acid transport systems ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RradSPS_2522 ABC-type amino acid transport/signal transduction systems periplasmic component/domain K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RradSPS_2520 ABC-type polar amino acid transport system ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RradSPS_0767 ABC-type oligopeptide transport system periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D RradSPS_0768 ABC-type dipeptide/oligopeptide/nickel transport systems permease component K15581 oppB; oligopeptide transport system permease protein
D RradSPS_0769 ABC-type dipeptide/oligopeptide/nickel transport systems permease component K15582 oppC; oligopeptide transport system permease protein
D RradSPS_0770 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D RradSPS_0771 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K10823 oppF; oligopeptide transport system ATP-binding protein
D RradSPS_0774 Bacterial extracellular solute-binding protein, family 5 Middle K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RradSPS_1892 Bacterial extracellular solute-binding protein, family 5 Middle K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RradSPS_2394 ABC-type Fe3+-hydroxamate transport system periplasmic component K25109 sirA; iron-siderophore transport system substrate-binding protein
D RradSPS_0170 ABC-type Fe3+-hydroxamate transport system periplasmic component K25109 sirA; iron-siderophore transport system substrate-binding protein
D RradSPS_0169 ABC-type Fe3+-hydroxamate transport system periplasmic component K25109 sirA; iron-siderophore transport system substrate-binding protein
D RradSPS_2393 ABC-type Fe3+-siderophore transport system permease component K25110 sirB; iron-siderophore transport system permease protein
D RradSPS_2392 ABC-type Fe3+-siderophore transport system permease component K25111 sirC; iron-siderophore transport system permease protein
D RradSPS_2390 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase component K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D RradSPS_0204 Periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RradSPS_0445 ABC-type Fe3+-hydroxamate transport system periplasmic component K25034 btuF; cobalamin transport system substrate-binding protein
D RradSPS_2225 ABC-type metal ion transport system periplasmic component/surface adhesin K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D RradSPS_2223 ABC-type Mn2+/Zn2+ transport systems permease component K11708 troC; manganese/zinc/iron transport system permease protein
D RradSPS_2222 ABC-type Mn2+/Zn2+ transport systems permease component K11709 troD; manganese/zinc/iron transport system permease protein
D RradSPS_2224 ABC-type Mn/Zn transport systems ATPase component K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RradSPS_2645 cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RradSPS_2644 ABC-type Co2+ transport system permease component K02007 cbiM; cobalt/nickel transport system permease protein
D RradSPS_2646 ABC-type cobalt transport system ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RradSPS_2643 Carboxypeptidase regulatory-like domain K16915 cbiL; nickel transport protein
D RradSPS_2318 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D RradSPS_2953 Cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D RradSPS_1911 ABC-type cobalt transport system permease component CbiQ-related transporter K16785 ecfT; energy-coupling factor transport system permease protein
D RradSPS_1913 ABC-type cobalt transport system ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RradSPS_1912 ABC-type cobalt transport system ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RradSPS_2952 ATPase components of various ABC-type transport systems containing duplicated ATPase K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RradSPS_1108 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D RradSPS_1109 ABC-type multidrug transport system ATPase component K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D RradSPS_2665 ABC-2 family transporter protein K25147 berB; beta-exotoxin I transport system permease protein
D RradSPS_2666 ABC-type multidrug transport system ATPase component K25148 berA; beta-exotoxin I transport system ATP-binding protein
D RradSPS_1557 Cell division protein K09811 ftsX; cell division transport system permease protein
D RradSPS_1558 FtsE: cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RradSPS_2852 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RradSPS_2381 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RradSPS_2680 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RradSPS_2112 ABC-type multidrug transport system permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D RradSPS_2113 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RradSPS_2129 ABC-type multidrug transport system permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D RradSPS_0281 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RradSPS_0763 ABC-type multidrug transport system permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D RradSPS_0180 ABC-type polysaccharide/polyol phosphate export systems permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D RradSPS_2844 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RradSPS_2845 drrA: daunorubicin resistance ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RradSPS_2909 ABC-type multidrug transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RradSPS_2851 ABC-type multidrug transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RradSPS_2256 ABC-type multidrug transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RradSPS_2380 ABC-type multidrug transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RradSPS_2679 ABC-type multidrug transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RradSPS_2114 drrA: daunorubicin resistance ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RradSPS_2130 ABC-type multidrug transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RradSPS_0282 ABC-type multidrug transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RradSPS_0764 drrA: daunorubicin resistance ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RradSPS_0181 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RradSPS_0734 MacB-like periplasmic core domain K02004 ABC.CD.P; putative ABC transport system permease protein
D RradSPS_0735 ABC-type antimicrobial peptide transport system ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RradSPS_2722 sufC: FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RradSPS_0117 dass: transporter, divalent anion:Na+ symporter (DASS) family K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D RradSPS_0118 dass: transporter, divalent anion:Na+ symporter (DASS) family K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D RradSPS_1675 Sugar (and other) transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D RradSPS_0616 MFS transporter, metabolite:H+ symporter (MHS) family protein K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D RradSPS_1065 Major Facilitator Superfamily K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D RradSPS_2145 Cyanate permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D RradSPS_0572 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RradSPS_2513 Major Facilitator Superfamily K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D RradSPS_1015 Major Facilitator Superfamily K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D RradSPS_1190 Major Facilitator Superfamily K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D RradSPS_2808 Permeases of the major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family
D RradSPS_2220 Permeases of the major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family
D RradSPS_1889 Arabinose efflux permease K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D RradSPS_1651 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RradSPS_1652 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D RradSPS_1654 fruA: PTS system, fructose subfamily, IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D RradSPS_1653 PTS system, Fru family, IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RradSPS_0354 Mannitol/fructose-specific phosphotransferase system IIA domain K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D RradSPS_0352 mtlA: PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D RradSPS_1644 Phosphotransferase system sorbitol-specific component IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D RradSPS_1643 Phosphotransferase system sorbitol-specific component IIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D RradSPS_1642 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D RradSPS_1027 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D RradSPS_2469 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) K02440 glpF; glycerol uptake facilitator
D RradSPS_2592 Ion transport protein K10716 kch; voltage-gated potassium channel
D RradSPS_2165 Ion channel K10716 kch; voltage-gated potassium channel
D RradSPS_0535 Ion channel K10716 kch; voltage-gated potassium channel
D RradSPS_1797 amt: ammonium transporter K03320 amt; ammonium transporter, Amt family
D RradSPS_0080 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RradSPS_0293 Small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D RradSPS_3035 mgtE: magnesium transporter K06213 mgtE; magnesium transporter
D RradSPS_2682 Mg2+ and Co2+ transporter K03284 corA; magnesium transporter
D RradSPS_0990 corA: magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D RradSPS_2560 CrcB-like protein K06199 crcB; fluoride exporter
D RradSPS_2561 Integral membrane protein possibly involved in chromosome condensation K06199 crcB; fluoride exporter
D RradSPS_2412 Hemolysins-related protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RradSPS_2752 Ethanolamine permease K16238 eat; ethanolamine permease
D RradSPS_1158 CDF: cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D RradSPS_3149 ZIP Zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family
D RradSPS_2875 ZIP Zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family
D RradSPS_2491 putative divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family
D RradSPS_2658 Membrane transporter of cations and cationic drugs K03297 emrE; small multidrug resistance pump
D RradSPS_0009 Hypothetical Protein K03297 emrE; small multidrug resistance pump
D RradSPS_2233 Membrane transporter of cations and cationic drugs K11741 sugE; quaternary ammonium compound-resistance protein SugE
D RradSPS_0035 EamA-like transporter family K03298 TC.DME; drug/metabolite transporter, DME family
D RradSPS_0201 putative permease DMT superfamily K11939 rhtA; inner membrane transporter RhtA
D RradSPS_1116 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D RradSPS_1239 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D RradSPS_1242 L-lactate permease K03303 lutP; lactate permease
D RradSPS_2265 lctP: transporter, lactate permease (LctP) family K03303 lutP; lactate permease
D RradSPS_2266 lctP: transporter, lactate permease (LctP) family K03303 lutP; lactate permease
D RradSPS_3052 L-lactate permease K03303 lutP; lactate permease
D RradSPS_0077 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family K05020 opuD; glycine betaine transporter
D RradSPS_3000 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family K02168 betT; choline/glycine/proline betaine transport protein
D RradSPS_2108 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family K02168 betT; choline/glycine/proline betaine transport protein
D RradSPS_3091 K+-dependent Na+/Ca+ exchanger like protein K07301 yrbG; cation:H+ antiporter
D RradSPS_0319 sodium/proline symporter K11928 putP; sodium/proline symporter
D RradSPS_2583 sss: transporter, solute:sodium symporter (SSS) family K14393 actP; cation/acetate symporter
D RradSPS_1671 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D RradSPS_1877 NhaP-type Na+/H+ and K+/H+ antiporters K24160 NHA1; sodium/hydrogen antiporter
D RradSPS_1550 Sodium/hydrogen exchanger family K26735 KEA4_5_6; K+:H+ antiporter
D RradSPS_2031 Kef-type K+ transport systems membrane component K26731 CHX; K+:H+ antiporter
D RradSPS_1248 Trk-type K+ transport systems membrane component K03498 trkH; trk/ktr system potassium uptake protein
D RradSPS_1249 TrkA-N domain K03499 trkA; trk/ktr system potassium uptake protein
D RradSPS_2919 pbuX: xanthine permease K24206 uacT; uric acid transporter
D RradSPS_1303 pbuX: xanthine permease K24206 uacT; uric acid transporter
D RradSPS_0279 Permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RradSPS_2981 benE: benzoate transporter K05782 benE; benzoate membrane transport protein
D RradSPS_2577 2A51: chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter
D RradSPS_2046 sulP: sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D RradSPS_3076 sulP: sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D RradSPS_2487 Mn2+ and Fe2+ transporters of the NRAMP family K03322 mntH; manganese transport protein
D RradSPS_2387 transport-energizing ATPase, TRC40/GET3/ArsA family K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RradSPS_1289 transport-energizing ATPase, TRC40/GET3/ArsA family K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RradSPS_1003 Na+/H+ antiporter NhaD and related arsenite permease K03893 arsB; arsenical pump membrane protein
D RradSPS_0979 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit K05559 phaA; multicomponent K+:H+ antiporter subunit A
D RradSPS_0972 NADH-Ubiquinone/plastoquinone (complex I), various chains K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D RradSPS_0973 Domain related to MnhB subunit of Na+/H+ antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D RradSPS_0974 Multisubunit Na+/H+ antiporter MnhC subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D RradSPS_0982 Multisubunit Na+/H+ antiporter MnhC subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D RradSPS_2962 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D RradSPS_0975 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D RradSPS_0980 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D RradSPS_2955 Na+/H+ ion antiporter subunit K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D RradSPS_0986 Na+/H+ ion antiporter subunit K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D RradSPS_0976 Multisubunit Na+/H+ antiporter MnhE subunit K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D RradSPS_2956 Multisubunit Na+/H+ antiporter MnhF subunit K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D RradSPS_0985 Multisubunit Na+/H+ antiporter MnhF subunit K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D RradSPS_0977 Multisubunit Na+/H+ antiporter MnhF subunit K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D RradSPS_2957 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D RradSPS_0984 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D RradSPS_0978 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D RradSPS_0530 mviN: integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RradSPS_0073 putative permease K24180 mleP; malate permease and related proteins
D RradSPS_0792 putative branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D RradSPS_0793 putative membrane protein K26606 azlD; branched chain amino acid efflux pump
D RradSPS_1072 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D RradSPS_1071 Tripartite tricarboxylate transporter TctB family K07794 tctB; putative tricarboxylic transport membrane protein
D RradSPS_1070 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D RradSPS_2437 putative proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter
D RradSPS_2897 VIT family K22736 VIT; vacuolar iron transporter family protein
D RradSPS_1501 Bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW
D RradSPS_0486 High-affinity Fe2+/Pb2+ permease K07243 FTR; high-affinity iron transporter
D RradSPS_0485 Imelysin K07224 efeO; iron uptake system component EfeO
D RradSPS_0484 Tat-translocated enzyme K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D RradSPS_3079 Cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D RradSPS_0573 narG: nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D RradSPS_0574 narH: nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D RradSPS_0576 narI: respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D RradSPS_1728 capsular exopolysaccharide family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RradSPS_1729 PAS domain S-box protein K19420 epsA; protein tyrosine kinase modulator
D RradSPS_1306 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RradSPS_1201 CopC domain K07156 copC; copper resistance protein C
D RradSPS_1202 Putative copper export protein K14166 ycnJ; copper transport protein
C 02044 Secretion system [BR:rrd02044]
D RradSPS_0852 Type II secretory pathway prepilin signal peptidase PulO and related peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RradSPS_0855 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D RradSPS_2003 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D RradSPS_0865 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway K02652 pilB; type IV pilus assembly protein PilB
D RradSPS_2002 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway K02652 pilB; type IV pilus assembly protein PilB
D RradSPS_1366 Type II secretory pathway component PulF K02653 pilC; type IV pilus assembly protein PilC
D RradSPS_0863 Type II secretory pathway component PulF K02653 pilC; type IV pilus assembly protein PilC
D RradSPS_1472 pilM: type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D RradSPS_1471 Fimbrial assembly protein (PilN) K02663 pilN; type IV pilus assembly protein PilN
D RradSPS_1470 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO
D RradSPS_0864 twitching motility protein K02669 pilT; twitching motility protein PilT
D RradSPS_0866 twitching motility protein K02669 pilT; twitching motility protein PilT
D RradSPS_0859 prepilin-type N-terminal cleavage/methylation domain K08084 fimT; type IV fimbrial biogenesis protein FimT
D RradSPS_1491 YGGT family K02221 yggT; YggT family protein
D RradSPS_1527 Helix-hairpin-helix motif K02237 comEA; competence protein ComEA
D RradSPS_1588 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RradSPS_1526 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D RradSPS_0054 putative hydrolase (metallo-beta-lactamase superfamily) K02238 comEC; competence protein ComEC
D RradSPS_1561 secA: preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RradSPS_1328 secD: protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RradSPS_1956 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D RradSPS_1329 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RradSPS_1780 secG: preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D RradSPS_1923 Preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D RradSPS_1393 ffh: signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RradSPS_1392 ftsY: signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RradSPS_2770 Membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RradSPS_0497 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RradSPS_1748 tatAE: twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D RradSPS_0991 mttA/Hcf106 family K03116 tatA; sec-independent protein translocase protein TatA
D RradSPS_1978 tatAE: twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D RradSPS_1765 mttA/Hcf106 family K03117 tatB; sec-independent protein translocase protein TatB
D RradSPS_1747 tatC: twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rrd02042]
D RradSPS_2412 Hemolysins-related protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RradSPS_1315 hlyIII: channel protein, hemolysin III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:rrd02022]
D RradSPS_2451 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RradSPS_0250 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07669 mprA; two-component system, OmpR family, response regulator MprA
D RradSPS_2588 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RradSPS_2898 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RradSPS_3049 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D RradSPS_0311 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
C 02035 Bacterial motility proteins [BR:rrd02035]
D RradSPS_1403 RNA polymerase sigma factor, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D RradSPS_0864 twitching motility protein K02669 pilT; twitching motility protein PilT
D RradSPS_0866 twitching motility protein K02669 pilT; twitching motility protein PilT
D RradSPS_0855 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D RradSPS_2003 prepilin-type N-terminal cleavage/methylation domain K02650 pilA; type IV pilus assembly protein PilA
D RradSPS_0865 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway K02652 pilB; type IV pilus assembly protein PilB
D RradSPS_2002 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway K02652 pilB; type IV pilus assembly protein PilB
D RradSPS_1366 Type II secretory pathway component PulF K02653 pilC; type IV pilus assembly protein PilC
D RradSPS_0863 Type II secretory pathway component PulF K02653 pilC; type IV pilus assembly protein PilC
D RradSPS_0852 Type II secretory pathway prepilin signal peptidase PulO and related peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RradSPS_1470 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO
D RradSPS_1471 Fimbrial assembly protein (PilN) K02663 pilN; type IV pilus assembly protein PilN
D RradSPS_1472 pilM: type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rrd04812]
D RradSPS_1538 mreB: cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D RradSPS_1496 ftsZ: cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RradSPS_1497 ftsA: cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RradSPS_3119 CobQ/CobB/MinD/ParA nucleotide binding domain K03496 parA; chromosome partitioning protein
D RradSPS_2925 CobQ/CobB/MinD/ParA nucleotide binding domain K03496 parA; chromosome partitioning protein
D RradSPS_3014 CobQ/CobB/MinD/ParA nucleotide binding domain K03496 parA; chromosome partitioning protein
D RradSPS_2767 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D RradSPS_2199 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D RradSPS_2766 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rrd04147]
D RradSPS_0410 Fructose-16-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RradSPS_0799 eno: phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RradSPS_1783 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RradSPS_1782 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RradSPS_0800 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RradSPS_2146 Zn-dependent dipeptidase microsomal dipeptidase like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RradSPS_0694 GroEL: chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RradSPS_0657 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RradSPS_3022 Phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RradSPS_0696 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RradSPS_1945 EF-Tu: translation elongation factor Tu K02358 tuf; elongation factor Tu
D RradSPS_1957 EF-Tu: translation elongation factor Tu K02358 tuf; elongation factor Tu
D RradSPS_2148 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RradSPS_2806 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_2083 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_0640 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_1842 Long-chain acyl-CoA synthetases (AMP-forming) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RradSPS_2815 56kDa selenium binding protein (SBP56) K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D RradSPS_0604 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_0424 AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RradSPS_2735 Peptidase family M3 K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D RradSPS_2985 S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RradSPS_1777 S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RradSPS_2567 adk: adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RradSPS_1922 adk: adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RradSPS_1439 apt: adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RradSPS_0887 argH: argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RradSPS_2293 argG: argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RradSPS_0067 D-hydantoinase: dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RradSPS_1818 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RradSPS_0193 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RradSPS_2458 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RradSPS_1023 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RradSPS_1120 GlnA: glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RradSPS_2751 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RradSPS_1754 Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RradSPS_1816 Pterin-4a-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RradSPS_0724 PGDH: phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RradSPS_3025 Phosphoglycerate dehydrogenase and related dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RradSPS_0916 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RradSPS_0395 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RradSPS_0062 zwf: glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RradSPS_0959 zwf: glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RradSPS_1781 tim: triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:rrd02048]
D RradSPS_2964 cas1: CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D RradSPS_1082 CRISPR-associated endonuclease Cas1, subtype I-C/DVULG K15342 cas1; CRISP-associated protein Cas1
D RradSPS_1083 cas2: CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D RradSPS_2773 cas2: CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D RradSPS_2778 DEAD/DEAH box helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RradSPS_1077 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RradSPS_2775 CRISPR-associated protein Cas4/Csa1, subtype I-A/APERN K19085 csa1; CRISPR-associated protein Csa1
D RradSPS_1081 cas4: CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D RradSPS_2774 cas4: CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D RradSPS_1079 CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG K19117 csd1; CRISPR-associated protein Csd1
D RradSPS_1080 CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG K19118 csd2; CRISPR-associated protein Csd2
D RradSPS_1078 CRISPR-associated protein Cas5, subtype I-C/DVULG K19119 cas5d; CRISPR-associated protein Cas5d
D RradSPS_0209 DNA modification methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D RradSPS_2544 AAA domain (dynein-related subfamily) K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D RradSPS_2543 McrBC 5-methylcytosine restriction system component K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D RradSPS_2776 Ribbon-helix-helix protein, copG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D RradSPS_3160 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D RradSPS_0684 Putative stress-responsive transcriptional regulator K03973 pspC; phage shock protein C
D RradSPS_1985 death-on-curing family protein K07341 doc; death on curing protein
D RradSPS_2842 Plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D RradSPS_3104 Plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D RradSPS_3103 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D RradSPS_2841 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D RradSPS_1319 putative nucleic acid-binding protein contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D RradSPS_2798 putative nucleic acid-binding protein contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D RradSPS_1320 Virulence-associated protein-related protein K18829 mvpT; antitoxin VapB
D RradSPS_1496 ftsZ: cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RradSPS_1538 mreB: cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D RradSPS_1961 Glutamyl- and glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_0537 glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_2267 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RradSPS_1357 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RradSPS_0091 Cysteine sulfinate desulfinase/cysteine desulfurase-related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rrd04090]
D RradSPS_2735 Peptidase family M3 K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:rrd01504]
D RradSPS_1015 Major Facilitator Superfamily K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D RradSPS_2347 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RradSPS_0421 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RradSPS_1638 Beta-lactamase enzyme family K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RradSPS_0266 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RradSPS_2906 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D RradSPS_0890 MerR HTH family regulatory protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:rrd00536]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rrd00537]
D RradSPS_2146 Zn-dependent dipeptidase microsomal dipeptidase like protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rrd03100]
D RradSPS_R0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RradSPS_R0008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RradSPS_R0046 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RradSPS_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RradSPS_R0007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RradSPS_R0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RradSPS_R0022 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RradSPS_R0014 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RradSPS_R0019 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RradSPS_R0010 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RradSPS_R0003 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RradSPS_R0043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RradSPS_R0016 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RradSPS_R0027 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RradSPS_R0018 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RradSPS_R0001 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RradSPS_R0025 tRNA-His K14226 tRNA-His; tRNA His
D RradSPS_R0005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RradSPS_R0002 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RradSPS_R0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RradSPS_R0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RradSPS_R0024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RradSPS_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RradSPS_R0017 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RradSPS_R0004 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RradSPS_R0038 tRNA-Met K14230 tRNA-Met; tRNA Met
D RradSPS_R0021 tRNA-Met K14230 tRNA-Met; tRNA Met
D RradSPS_R0034 tRNA-Met K14230 tRNA-Met; tRNA Met
D RradSPS_R0013 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RradSPS_R0028 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RradSPS_R0012 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RradSPS_R0006 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RradSPS_R0044 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RradSPS_R0041 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RradSPS_R0042 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RradSPS_R0037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RradSPS_R0035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RradSPS_R0029 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RradSPS_R0033 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RradSPS_R0036 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RradSPS_R0020 tRNA-Val K14237 tRNA-Val; tRNA Val
D RradSPS_R0039 tRNA-Val K14237 tRNA-Val; tRNA Val
D RradSPS_R0015 tRNA-Val K14237 tRNA-Val; tRNA Val
D RradSPS_R0030 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D RradSPS_R0049 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RradSPS_2400 Oxidoreductase family, NAD-binding Rossmann fold K19181 afr; 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) [EC:1.1.1.292]
D RradSPS_3073 Aldo/keto reductases related to diketogulonate reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D RradSPS_2188 Aldo/keto reductases related to diketogulonate reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D RradSPS_2609 GMC oxidoreductase K20927 mpdB; 2-methyl-1,2-propanediol dehydrogenase [EC:1.1.1.400]
D RradSPS_1647 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D RradSPS_0581 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D RradSPS_2465 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D RradSPS_1648 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D RradSPS_0580 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D RradSPS_2464 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D RradSPS_2686 F420-dependent oxidoreductase, G6PDH family K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2]
D RradSPS_2082 Alcohol dehydrogenase class IV K11173 ADHFE1; hydroxyacid-oxoacid transhydrogenase [EC:1.1.99.24]
D RradSPS_2606 NAD-dependent aldehyde dehydrogenase K20928 mpdC; 2-hydroxy-2-methylpropanal dehydrogenase [EC:1.2.1.98]
D RradSPS_1299 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS-like protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RradSPS_2626 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS-like protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RradSPS_2624 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM-like protein K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RradSPS_2625 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL-like protein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RradSPS_0923 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL-like protein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RradSPS_0393 TENA/THI-4/PQQC family K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D RradSPS_2636 mycofactocin radical SAM maturase K24696 mftC; [mycofactocin precursor peptide]-tyrosine decarboxylase / 3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethylpyrrolidin-2-one synthase [EC:1.3.98.7 4.1.99.26]
D RradSPS_1267 GG-red-SF: geranylgeranyl reductase family K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D RradSPS_2637 heme/flavin dehydrogenase, mycofactocin system K24693 mftD; pre-mycofactocin synthase [EC:1.4.3.26]
D RradSPS_1153 putative NAD/FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D RradSPS_0595 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RradSPS_0836 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RradSPS_0842 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RradSPS_1707 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RradSPS_2176 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RradSPS_2279 msrA: peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RradSPS_2217 TIGR00357: methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RradSPS_0171 Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RradSPS_1786 putative glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D RradSPS_2184 Mn-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D RradSPS_0148 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RradSPS_2587 peroxiredoxin, OsmC subfamily K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RradSPS_2055 peroxiredoxin, Ohr subfamily K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RradSPS_3013 Thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RradSPS_3002 Protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RradSPS_3007 Protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RradSPS_0138 Trans-aconitate methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D RradSPS_1250 Tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D RradSPS_1172 Macrocin-O-methyltransferase (TylF) K05303 K05303; O-methyltransferase [EC:2.1.1.-]
D RradSPS_2303 Acetyltransferase (isoleucine patch superfamily) K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D RradSPS_2333 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D RradSPS_1036 aat: leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RradSPS_0246 NCAIR mutase (PurE)-related protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D RradSPS_1132 lgt: prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RradSPS_3028 Dak1 domain K20902 derK; D-erythrulose 4-kinase [EC:2.7.1.210]
D RradSPS_0650 2-phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16]
D RradSPS_1375 YloV: DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D RradSPS_1964 putative nucleic-acid-binding protein (contains the HHH domain) K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D RradSPS_1622 putative acyl-CoA transferases/carnitine dehydratase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D RradSPS_2987 Esterase/lipase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D RradSPS_2218 putative phosphatase homologous to the C-terminal domain of histone macroH2A1 K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D RradSPS_0208 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RradSPS_2058 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RradSPS_0308 Phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RradSPS_1517 HDIG: uncharacterized domain HDIG K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D RradSPS_0783 TIGR00010: hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RradSPS_1817 Micrococcal nuclease (thermonuclease)-like protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D RradSPS_1613 Hypothetical Protein K23086 ggH; glucosylglycerate hydrolase [EC:3.2.1.208]
D RradSPS_2638 mycofactocin system creatininase family protein K24697 mftE; mycofactocin precursor peptide peptidase [EC:3.4.14.14]
D RradSPS_1475 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RradSPS_2065 putative xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RradSPS_1850 Polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RradSPS_2826 Polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RradSPS_1241 putative amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RradSPS_1300 Cytosine deaminase and related metal-dependent hydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D RradSPS_2420 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RradSPS_1699 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RradSPS_1717 Protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D RradSPS_0665 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D RradSPS_0016 uvde: UV damage endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D RradSPS_0679 YjeF family C-terminal domain K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RradSPS_1039 TIGR00268: TIGR00268 family protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D RradSPS_2717 TIGR00299: TIGR00299 family protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D RradSPS_2613 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D RradSPS_1599 putative GTPase K05716 CPGS; cyclic 2,3-diphosphoglycerate synthase [EC:6.5.1.9]
D RradSPS_0240 Respiratory-chain NADH dehydrogenase 51 Kd subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D RradSPS_2597 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D RradSPS_2935 HAD ATPase, P-type, family IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D RradSPS_3148 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D RradSPS_2876 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D RradSPS_2917 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D RradSPS_0837 CBS domain K04767 acuB; acetoin utilization protein AcuB
D RradSPS_0966 Deacetylase K04768 acuC; acetoin utilization protein AcuC
D RradSPS_0472 Cysteine-rich domain K18928 lldE; L-lactate dehydrogenase complex protein LldE
D RradSPS_0473 TIGR00273: iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D RradSPS_0474 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D RradSPS_1847 NADPH:quinone reductase and related Zn-dependent oxidoreductase K13955 yogA; zinc-binding alcohol dehydrogenase/oxidoreductase
D RradSPS_2576 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D RradSPS_2727 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D RradSPS_0886 NifU like protein involved in Fe-S cluster formation K04488 iscU; nitrogen fixation protein NifU and related proteins
D RradSPS_2504 ACT domain-containing protein K06862 ehbQ; energy-converting hydrogenase B subunit Q
D RradSPS_0167 hypothetical protein K09165 K09165; dodecin
C 99983 Lipid metabolism
D RradSPS_2887 Acyl-CoA dehydrogenase, C-terminal domain K09456 aidB; putative acyl-CoA dehydrogenase
D RradSPS_1376 DegV: EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RradSPS_0503 Selenocysteine lyase K11325 K11325; L-cysteine/cystine lyase
D RradSPS_1494 TIGR00044: pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RradSPS_2905 TIGR00374: TIGR00374 family protein K07027 K07027; glycosyltransferase 2 family protein
D RradSPS_2080 TIGR00374: TIGR00374 family protein K07027 K07027; glycosyltransferase 2 family protein
D RradSPS_0752 Uncharacterized protein family (UPF0104) K07027 K07027; glycosyltransferase 2 family protein
D RradSPS_2639 mycofactocin system glycosyltransferase K24698 mftF; mycofactocin glycosyltransferase
C 99987 Cofactor metabolism
D RradSPS_1331 putative unusual protein kinase K03688 ubiB; ubiquinone biosynthesis protein
D RradSPS_2095 putative unusual protein kinase K03688 ubiB; ubiquinone biosynthesis protein
D RradSPS_2000 Hypothetical Protein K03688 ubiB; ubiquinone biosynthesis protein
D RradSPS_2633 mycofactocin: mycofactocin precursor K24694 mftA; mycofactocin precursor peptide MftA
D RradSPS_2635 putative mycofactocin binding protein MftB K24695 mftB; mycofactocin biosynthesis protein MftB
C 99988 Secondary metabolism
C 99999 Others
D RradSPS_1010 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K15975 K15975; glyoxalase family protein
D RradSPS_2012 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K15975 K15975; glyoxalase family protein
D RradSPS_0597 putative membrane protein K15977 K15977; putative oxidoreductase
D RradSPS_1009 putative esterase K06999 K06999; phospholipase/carboxylesterase
D RradSPS_0406 ATP-grasp domain K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RradSPS_1641 Glucitol operon activator protein (GutM) K02466 gutM; glucitol operon activator protein
D RradSPS_1296 Cold shock protein K03704 cspA; cold shock protein
D RradSPS_2718 Cold shock protein K03704 cspA; cold shock protein
D RradSPS_2155 Cold shock protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D RradSPS_1834 hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RradSPS_0853 hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RradSPS_0967 hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RradSPS_1548 tig: trigger factor K03545 tig; trigger factor
D RradSPS_1555 smpB: SsrA-binding protein K03664 smpB; SsrA-binding protein
D RradSPS_1401 TIGR00368: Mg chelatase-like protein K07391 comM; magnesium chelatase family protein
D RradSPS_3086 putative redox protein regulator of disulfide bond formation K07397 yhfA; putative redox protein
D RradSPS_2620 Xanthine and CO dehydrogenases maturation factor XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D RradSPS_0364 putative restriction endonuclease K07454 K07454; putative restriction endonuclease
D RradSPS_1539 radc: DNA repair protein RadC K03630 radC; DNA repair protein RadC
D RradSPS_1400 TIGR00252: TIGR00252 family protein K07460 yraN; putative endonuclease
D RradSPS_1402 dprA: DNA protecting protein DprA K04096 smf; DNA processing protein
D RradSPS_0995 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 ycaJ; putative ATPase
D RradSPS_2020 Phage integrase family K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D RradSPS_0097 PspA/IM30 family K03969 pspA; phage shock protein A
D RradSPS_0465 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RradSPS_1791 Amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RradSPS_0343 Amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RradSPS_2307 sss: transporter, solute:sodium symporter (SSS) family K03307 TC.SSS; solute:Na+ symporter, SSS family
D RradSPS_0316 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RradSPS_0888 agcS: amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RradSPS_1866 agcS: amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RradSPS_2986 putative Na+-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D RradSPS_1044 putative Na+-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D RradSPS_0070 NCS1 nucleoside transporter family K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D RradSPS_0345 Purine-cytosine permease-related protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D RradSPS_2239 Nucleoside permease K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D RradSPS_2769 putative RNA-binding protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D RradSPS_2384 Carbon starvation protein predicted membrane protein K06200 cstA; carbon starvation protein
D RradSPS_1682 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D RradSPS_1518 Phosphate starvation-inducible protein PhoH predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
C 99994 Others
D RradSPS_0705 Phosphate uptake regulator K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RradSPS_0924 Putative cation transport regulator K06197 chaB; cation transport regulator
D RradSPS_0163 BON domain K04065 osmY; hyperosmotically inducible periplasmic protein
D RradSPS_0467 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D RradSPS_2754 export-related chaperone protein CsaA K06878 K06878; tRNA-binding protein
D RradSPS_1191 putative drug exporters of the RND superfamily K06994 K06994; putative drug exporter of the RND superfamily
D RradSPS_2092 putative drug exporters of the RND superfamily K06994 K06994; putative drug exporter of the RND superfamily
D RradSPS_0447 Patatin-like phospholipase K07001 K07001; NTE family protein
D RradSPS_1160 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 K07025 K07025; putative hydrolase of the HAD superfamily
D RradSPS_2417 TIGR00049: iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D RradSPS_2723 sufB: FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D RradSPS_2724 sufD: FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D RradSPS_0383 putative membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D RradSPS_0556 putative metal-dependent hydrolase with the TIM-barrel fold K07048 PTER; phosphotriesterase-related protein
D RradSPS_2136 YihY family inner membrane protein K07058 K07058; membrane protein
D RradSPS_2260 putative phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D RradSPS_1141 SufE protein probably involved in Fe-S center assembly K02426 sufE; cysteine desulfuration protein SufE
D RradSPS_2847 hypothetical protein K04750 phnB; PhnB protein
D RradSPS_3005 arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D RradSPS_0123 hypothetical protein K03744 lemA; LemA protein
D RradSPS_2190 protein of unknown function (DUF202) K00389 yidH; putative membrane protein
D RradSPS_2191 putative membrane protein K00389 yidH; putative membrane protein
D RradSPS_2357 putative membrane protein K08981 K08981; putative membrane protein
D RradSPS_2895 Short C-terminal domain K08982 K08982; putative membrane protein
C 99997 Function unknown
D RradSPS_0367 HD superfamily phosphohydrolase K06885 K06885; uncharacterized protein
D RradSPS_0412 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein
D RradSPS_0162 Alpha/beta hydrolase family K06889 K06889; uncharacterized protein
D RradSPS_2610 SnoaL-like domain K06893 K06893; uncharacterized protein
D RradSPS_2664 Protein of unknown function (DUF815) K06923 K06923; uncharacterized protein
D RradSPS_1614 putative CoA-binding protein K06929 K06929; uncharacterized protein
D RradSPS_0205 HDIG: uncharacterized domain HDIG K06950 K06950; uncharacterized protein
D RradSPS_1395 putative RNA-binding protein (contains KH domain) K06960 K06960; uncharacterized protein
D RradSPS_1958 putative RNA-binding protein containing a PIN domain K06962 K06962; uncharacterized protein
D RradSPS_0749 putative Zn-dependent protease K06973 K06973; uncharacterized protein
D RradSPS_2054 /NonD: hydrolase CocE/NonD family protein K06978 K06978; uncharacterized protein
D RradSPS_0130 putative enzyme of the cupin superfamily K06995 K06995; uncharacterized protein
D RradSPS_2991 PPOX class probable F420-dependent enzyme, Rv2061 family K07006 K07006; uncharacterized protein
D RradSPS_0021 Metallo-beta-lactamase superfamily K07041 K07041; uncharacterized protein
D RradSPS_1672 putative metal-dependent hydrolase of the TIM-barrel fold K07045 K07045; uncharacterized protein
D RradSPS_1031 putative metal-dependent hydrolase of the TIM-barrel fold K07045 K07045; uncharacterized protein
D RradSPS_1734 Amidohydrolase K07045 K07045; uncharacterized protein
D RradSPS_3117 Hypothetical Protein K07064 K07064; uncharacterized protein
D RradSPS_1043 PIN domain K07064 K07064; uncharacterized protein
D RradSPS_1712 putative nucleic-acid-binding protein containing a Zn-ribbon K07068 K07068; uncharacterized protein
D RradSPS_2166 yfcH: TIGR01777 family protein K07071 K07071; uncharacterized protein
D RradSPS_2098 putative nucleotidyltransferase K07075 K07075; uncharacterized protein
D RradSPS_1875 putative nucleotidyltransferase K07075 K07075; uncharacterized protein
D RradSPS_2786 putative oxidoreductase K07077 K07077; uncharacterized protein
D RradSPS_2518 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D RradSPS_2977 putative permease K07090 K07090; uncharacterized protein
D RradSPS_0612 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D RradSPS_2174 putative permease K07090 K07090; uncharacterized protein
D RradSPS_2514 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D RradSPS_0084 putative permease K07090 K07090; uncharacterized protein
D RradSPS_2026 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D RradSPS_3064 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D RradSPS_0176 putative phosphatase K07093 K07093; uncharacterized protein
D RradSPS_0186 putative phosphatase K07093 K07093; uncharacterized protein
D RradSPS_0210 yfcE: phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D RradSPS_2168 putative phosphoesterases related to the Icc protein K07096 K07096; uncharacterized protein
D RradSPS_3083 putative transporter component K07112 K07112; uncharacterized protein
D RradSPS_3084 sulfur transport K07112 K07112; uncharacterized protein
D RradSPS_2017 putative distant relative of homeotic protein bithoraxoid K07131 K07131; uncharacterized protein
D RradSPS_0722 putative Fe-S protein K07140 K07140; MOSC domain-containing protein
D RradSPS_1017 putative membrane protein K07148 K07148; uncharacterized protein
D RradSPS_2230 putative membrane protein K07148 K07148; uncharacterized protein
D RradSPS_1253 Uncharacterized membrane protein possible Na+ channel or pump K07150 K07150; uncharacterized protein
D RradSPS_2622 Protein containing von Willebrand factor type A (vWA) domain K07161 K07161; uncharacterized protein
D RradSPS_2631 VWA domain containing CoxE-like protein K07161 K07161; uncharacterized protein
D RradSPS_1143 TIGR00278: putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D RradSPS_0458 hypothetical protein K08999 K08999; uncharacterized protein
D RradSPS_2116 protein of unknown function (DUF192) K09005 K09005; uncharacterized protein
D RradSPS_0802 hypothetical protein K09009 K09009; uncharacterized protein
D RradSPS_1519 hypothetical protein K09117 K09117; uncharacterized protein
D RradSPS_2562 hypothetical protein K09137 K09137; uncharacterized protein
D RradSPS_2563 hypothetical protein K09137 K09137; uncharacterized protein
D RradSPS_2430 hypothetical protein K09166 K09166; uncharacterized protein
D RradSPS_2358 hypothetical protein K09167 K09167; uncharacterized protein
D RradSPS_2618 hypothetical protein K09386 K09386; uncharacterized protein
D RradSPS_2295 hypothetical protein K09707 K09707; uncharacterized protein
D RradSPS_1773 hypothetical protein K09744 K09744; uncharacterized protein
D RradSPS_1417 hypothetical protein K09764 K09764; uncharacterized protein
D RradSPS_0114 Uncharacterized protein conserved in bacteria (DUF2225) K09766 K09766; uncharacterized protein
D RradSPS_1038 hypothetical protein K09793 K09793; uncharacterized protein
D RradSPS_2378 hypothetical protein K09919 K09919; uncharacterized protein
D RradSPS_2528 Tic20-like protein K09940 K09940; uncharacterized protein
D RradSPS_2607 hypothetical protein K09959 K09959; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024