+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Raphanus sativus (radish)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        108820636 DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        108842159 DNA-directed RNA polymerase II subunit RPB1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        108854714 DNA-directed RNA polymerase II subunit 2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        108842684 DNA-directed RNA polymerase II subunit 2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        108819104 DNA-directed RNA polymerase II subunit 2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        108822642 DNA-directed RNA polymerase II subunit 2-like isoform X1	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        130494367 DNA-directed RNA polymerase II subunit 2-like	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        108805678 DNA-directed RNA polymerases II, IV and V subunit 3	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        108809196 LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
E        108854160 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
E        130500778 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        108812084 DNA-directed RNA polymerases IV and V subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        108819605 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        108818390 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        108847707 uncharacterized protein LOC108847707	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        130494245 uncharacterized protein LOC130494245	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        108824587 DNA-directed RNA polymerase II subunit 7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        108837973 DNA-directed RNA polymerase II subunit 7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        130509305 DNA-directed RNA polymerase II subunit 7-like	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        108821655 DNA-directed RNA polymerases II, IV and V subunit 9B-like	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        108829527 DNA-directed RNA polymerases II, IV and V subunit 9B	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        108862191 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108846964 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108857419 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108853457 DNA-directed RNA polymerases IV and V subunit 5B	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108834096 DNA-directed RNA polymerase V subunit 5C	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108846380 DNA-directed RNA polymerase subunit 5-like protein 1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108857658 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108852288 DNA-directed RNA polymerase V subunit 5C	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        130501500 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        130509224 DNA-directed RNA polymerase subunit 5-like protein 1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108849733 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        108824228 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        108805380 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        108863423 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        108821008 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        108809796 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        108820792 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        108825349 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        130495906 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        130495960 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        130505237 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        130510190 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
E        108823549 DNA-directed RNA polymerase IV subunit 1	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        130501668 LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV subunit 1-like	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        108838170 DNA-directed RNA polymerase IV subunit 1 isoform X1	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        108847343 DNA-directed RNA polymerase V subunit 1 isoform X1	K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] 
E        108860282 DNA-directed RNA polymerases IV and V subunit 2	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        108839791 DNA-directed RNA polymerase V subunit 7	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        108819288 DNA-directed RNA polymerase V subunit 7	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        108819518 DNA-directed RNA polymerase subunit 7-like protein	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        108813034 DNA-directed RNA polymerase IV subunit 7 isoform X1	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
C    Basal transcription factors
D      TFIIA
E        108822706 transcription initiation factor IIA large subunit	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        108856609 transcription initiation factor IIA large subunit	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        108827207 uncharacterized protein LOC108827207 isoform X1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        130505426 transcription initiation factor IIA large subunit-like	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        108855435 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        108841653 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        108819379 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        130498519 transcription initiation factor IIA subunit 2-like	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        130502486 transcription initiation factor IIA subunit 2-like	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        108812864 transcription initiation factor IIB-1	K03124 TFIIB; transcription initiation factor TFIIB 
E        108826813 plant-specific TFIIB-related protein 2	K03124 TFIIB; transcription initiation factor TFIIB 
E        108854452 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        108861408 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        108844371 transcription initiation factor IIB-1	K03124 TFIIB; transcription initiation factor TFIIB 
E        108841609 plant-specific TFIIB-related protein 1-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        108807449 plant-specific TFIIB-related protein 2	K03124 TFIIB; transcription initiation factor TFIIB 
E        108810887 plant-specific TFIIB-related protein 2-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        108834977 transcription initiation factor IIB-1	K03124 TFIIB; transcription initiation factor TFIIB 
E        108853564 plant-specific TFIIB-related protein 2-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        108846488 TATA-box-binding protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108811732 TATA-box-binding protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108857075 TATA-box-binding protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108841486 TATA-box-binding protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108822838 TATA-box-binding protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        130504455 TATA-box-binding protein 2-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        130505904 TATA-box-binding protein 2-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108811835 transcription initiation factor TFIID subunit 1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        108822197 transcription initiation factor TFIID subunit 1 isoform X1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        130498384 transcription initiation factor TFIID subunit 1-like isoform X1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        108827840 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        108813507 transcription initiation factor TFIID subunit 4b isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        108855407 transcription initiation factor TFIID subunit 4b	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        108861126 transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        108858299 transcription initiation factor TFIID subunit 4b-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        108805983 transcription initiation factor TFIID subunit 5 isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        108823544 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        130496504 transcription initiation factor TFIID subunit 5-like isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        130500437 transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        130503494 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        108812813 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        108822678 transcription initiation factor TFIID subunit 6 isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        130499195 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        130502247 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        108809338 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        108808633 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        108841776 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        108842578 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        108861873 uncharacterized protein LOC108861873 isoform X1	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        108861476 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        108823017 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        108862602 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        108849829 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        108822704 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        108831920 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        108838961 transcription initiation factor TFIID subunit 11-like	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        108807782 transcription initiation factor TFIID subunit 11-like	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        108807794 transcription initiation factor TFIID subunit 11-like	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        108827070 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        108862458 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        108814214 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        108851655 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        108835566 transcription factor efuD	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        108840672 uncharacterized protein LOC108840672	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        108814190 transcription factor efuD	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        108835980 LOW QUALITY PROTEIN: uncharacterized protein LOC108835980	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
E        108841255 uncharacterized protein LOC108841255	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        108824942 transcription initiation factor IIF subunit alpha-like	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        108847752 transcription initiation factor IIF subunit alpha	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        108825661 transcription initiation factor IIF subunit beta	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        108830052 uncharacterized protein LOC108830052	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        108831220 uncharacterized protein LOC108831220 isoform X2	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        108810845 transcription initiation factor IIF subunit beta	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        108844540 uncharacterized protein LOC108844540	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        108814601 uncharacterized protein LOC108814601	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        108818435 general transcription and DNA repair factor IIH subunit TFB1-1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        108818895 general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        130506772 general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        108819433 general transcription and DNA repair factor IIH subunit TFB4	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        108835518 general transcription and DNA repair factor IIH subunit TFB4	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        130511661 general transcription and DNA repair factor IIH subunit TFB4-like	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        108827553 general transcription and DNA repair factor IIH subunit TFB2	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        108848303 general transcription and DNA repair factor IIH helicase subunit XPB1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        108815845 general transcription and DNA repair factor IIH helicase subunit XPB1-like	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        108822702 general transcription and DNA repair factor IIH helicase subunit XPD	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        108820845 general transcription and DNA repair factor IIH subunit TFB5-like	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        108861043 general transcription and DNA repair factor IIH subunit TFB5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        130506307 general transcription and DNA repair factor IIH subunit TFB5-like	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        108816959 cyclin-dependent kinase D-2	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        108818180 cyclin-dependent kinase D-2	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        108826160 cyclin-dependent kinase D-1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        108821751 cyclin-dependent kinase D-3	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        130506364 cyclin-dependent kinase D-3	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        108831673 uncharacterized protein LOC108831673	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        108854523 uncharacterized protein LOC108854523 isoform X1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        108825688 cyclin-H1-1 isoform X1	K06634 CCNH; cyclin H 
E        108809089 cyclin-H1-1	K06634 CCNH; cyclin H 
E        108812466 cyclin-H1-1	K06634 CCNH; cyclin H 
E        130506191 cyclin-H1-1-like isoform X1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        108857355 mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        108811559 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        108836831 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        108832491 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        130497045 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        108847902 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        108847913 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        108849694 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        108808971 mediator of RNA polymerase II transcription subunit 18 isoform X1	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        108806884 mediator of RNA polymerase II transcription subunit 20a	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        108824841 mediator of RNA polymerase II transcription subunit 22b	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        108862988 mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
D      Middle
E        108814486 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 7b	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        108839951 mediator of RNA polymerase II transcription subunit 7a	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        108805708 mediator of RNA polymerase II transcription subunit 10b	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        108823643 mediator of RNA polymerase II transcription subunit 21 isoform X1	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        108814961 mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
E        130501484 mediator of RNA polymerase II transcription subunit 31-like	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        108861816 mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
D      CDK-module
E        108828650 cyclin-dependent kinase E-1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        108809027 cyclin-C1-1 isoform X2	K15161 CCNC; cyclin-C 
E        108853910 cyclin-C1-1	K15161 CCNC; cyclin-C 
E        108806627 cyclin-C1-2	K15161 CCNC; cyclin-C 
E        130494472 cyclin-C1-1-like isoform X1	K15161 CCNC; cyclin-C 
E        108831214 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        108807073 mediator of RNA polymerase II transcription subunit 13	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        108811998 mediator of RNA polymerase II transcription subunit 23	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        108823036 mediator of RNA polymerase II transcription subunit 25 isoform X2	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        108850111 mediator of RNA polymerase II transcription subunit 25	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        108831307 mediator of RNA polymerase II transcription subunit 25 isoform X2	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        130507300 mediator of RNA polymerase II transcription subunit 25-like isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        108862837 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        108820635 mediator of RNA polymerase II transcription subunit 32	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        108842029 mediator of RNA polymerase II transcription subunit 33B	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        108863594 mediator of RNA polymerase II transcription subunit 33A isoform X1	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        108806398 mediator of RNA polymerase II transcription subunit 33A	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        108838445 mediator of RNA polymerase II transcription subunit 33A	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        108848600 histone acetyltransferase GCN5	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        130511995 histone acetyltransferase GCN5-like	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        108826517 transcription-associated protein 1-like	K08874 TRRAP; transformation/transcription domain-associated protein 
E        108841773 uncharacterized protein LOC108841773	K08874 TRRAP; transformation/transcription domain-associated protein 
E        108861150 uncharacterized protein LOC108861150	K08874 TRRAP; transformation/transcription domain-associated protein 
E        130501466 LOW QUALITY PROTEIN: uncharacterized protein LOC130501466	K08874 TRRAP; transformation/transcription domain-associated protein 
E        108862828 transcriptional adapter ADA2a isoform X2	K11314 TADA2A; transcriptional adapter 2-alpha 
E        108822846 transcriptional adapter ADA2b isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        108827840 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        108813507 transcription initiation factor TFIID subunit 4b isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        108855407 transcription initiation factor TFIID subunit 4b	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        108861126 transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        108858299 transcription initiation factor TFIID subunit 4b-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        108805983 transcription initiation factor TFIID subunit 5 isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        108823544 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        130496504 transcription initiation factor TFIID subunit 5-like isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        130500437 transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        130503494 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        108812813 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        108822678 transcription initiation factor TFIID subunit 6 isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        130499195 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        130502247 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        108809338 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        108808633 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        108823017 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        108862602 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        108849829 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        108822704 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        108831920 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        108862458 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        108814214 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        108844402 SAGA-associated factor 11	K11363 SGF11; SAGA-associated factor 11 
E        130502589 SAGA-associated factor 11-like	K11363 SGF11; SAGA-associated factor 11 
E        108854730 SAGA-associated factor 29 homolog A isoform X1	K11364 SGF29; SAGA-associated factor 29 
E        108827159 protein CHROMATIN REMODELING 5	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        108843403 ubiquitin C-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        108812434 spliceosome-associated protein 130 A-like	K12830 SF3B3; splicing factor 3B subunit 3 
E        108812435 spliceosome-associated protein 130 A	K12830 SF3B3; splicing factor 3B subunit 3 
E        108862363 pre-mRNA-splicing factor prp12	K12830 SF3B3; splicing factor 3B subunit 3 
E        130494449 pre-mRNA-splicing factor prp12-like	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        108853595 ATP-dependent helicase BRM-like isoform X1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        130509824 ATP-dependent helicase BRM	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        108859231 chromatin structure-remodeling complex protein BSH isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        108859261 SWI/SNF complex subunit SWI3C	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        108839733 SWI/SNF complex subunit SWI3D	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        108822639 SWI/SNF complex subunit SWI3C	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        108823071 SWI/SNF complex subunit SWI3D	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        108848421 SWI/SNF complex subunit SWI3B	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        108837083 SWI/SNF complex subunit SWI3A isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        130506296 SWI/SNF complex subunit SWI3C-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        108847358 SWI/SNF complex subunit SWI3A isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        108817106 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        108844905 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        108808159 actin-related protein 4	K11340 ACTL6A; actin-like protein 6A 
E        108822970 LOW QUALITY PROTEIN: actin-related protein 4	K11340 ACTL6A; actin-like protein 6A 
D      SWI/SNF complex
E        108859231 chromatin structure-remodeling complex protein BSH isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        108815956 RNA polymerase II transcriptional coactivator KIWI	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        108843218 RNA polymerase II transcriptional coactivator KIWI isoform X1	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        108844544 RNA polymerase II transcriptional coactivator KELP	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        108827442 protein SHORT ROOT IN SALT MEDIUM 1 isoform X1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        108847549 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        108847027 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        108813764 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        108816833 transcription elongation factor TFIIS-like	K03145 TFIIS; transcription elongation factor S-II 
E        108833632 transcription elongation factor SPT4 homolog 1-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        108806320 transcription elongation factor SPT4 homolog 2	K15171 SUPT4H1; transcription elongation factor SPT4 
E        108847208 putative transcription elongation factor SPT5 homolog 2 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        108847493 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        130510051 putative transcription elongation factor SPT5 homolog 2	K15172 SUPT5H; transcription elongation factor SPT5 
E        108833814 transcription elongation factor SPT6 homolog	K11292 SUPT6H; transcription elongation factor SPT6 
E        108817776 transcription elongation factor SPT6 homolog	K11292 SUPT6H; transcription elongation factor SPT6 
E        108842326 transcription elongation factor SPT6 homolog isoform X1	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        108854422 polyadenylation and cleavage factor homolog 4	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        108816954 polyadenylation and cleavage factor homolog 5-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        108828142 polyadenylation and cleavage factor homolog 4 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        108812587 polyadenylation and cleavage factor homolog 4 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        108830402 polyadenylation and cleavage factor homolog 5	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        108842873 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        108813036 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        130496922 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        108816986 uncharacterized protein LOC108816986 isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        108818669 30-kDa cleavage and polyadenylation specificity factor 30	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        108828303 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108825480 serine/threonine-protein phosphatase PP1 isozyme 3	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108847399 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108837189 serine/threonine-protein phosphatase PP1 isozyme 4	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108843586 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108849111 serine/threonine-protein phosphatase PP1 isozyme 7	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108854678 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108847427 serine/threonine-protein phosphatase PP1 isozyme 4	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108847669 serine/threonine-protein phosphatase PP1 isozyme 1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108847812 serine/threonine-protein phosphatase PP1 isozyme 6	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108805956 serine/threonine-protein phosphatase PP1 isozyme 9-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108813545 serine/threonine-protein phosphatase PP1 isozyme 9	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108862272 serine/threonine-protein phosphatase PP1 isozyme 9	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108828018 serine/threonine-protein phosphatase PP1 isozyme 6 isoform X2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108805642 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108813461 serine/threonine-protein phosphatase PP1 isozyme 2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108863133 serine/threonine-protein phosphatase PP1 isozyme 9	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        130505084 serine/threonine-protein phosphatase PP1 isozyme 8-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        130505422 serine/threonine-protein phosphatase PP1 isozyme 9-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        130494499 serine/threonine-protein phosphatase PP1 isozyme 1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108822715 uncharacterized protein LOC108822715 isoform X1	K06100 SYMPK; symplekin 
E        108842511 uncharacterized protein LOC108842511 isoform X1	K06100 SYMPK; symplekin 
E        108809081 uncharacterized protein LOC108809081 isoform X1	K06100 SYMPK; symplekin 
E        108815416 uncharacterized protein LOC108815416	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        130506441 uncharacterized protein LOC130506441	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        130507645 uncharacterized protein LOC130507645	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        130510718 uncharacterized protein LOC130510718	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        108834345 5'-3' exoribonuclease 3	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        108855167 5'-3' exoribonuclease 2	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        108833939 5'-3' exoribonuclease 3	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        108823736 NAD-capped RNA hydrolase DXO1	K14845 RAI1; RAT1-interacting protein 
E        108853995 NAD-capped RNA hydrolase DXO1	K14845 RAI1; RAT1-interacting protein 
E        108855327 uncharacterized protein LOC108855327	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        108843461 uncharacterized protein LOC108843461	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        108827653 uncharacterized protein LOC108827653	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        108847964 uncharacterized protein LOC108847964	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        108857360 peptidyl-prolyl cis-trans isomerase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
E        108806071 peptidyl-prolyl cis-trans isomerase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        108817789 protein PAF1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        108863180 protein CDC73 homolog	K15175 CDC73; parafibromin 
E        108863197 protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        108827974 protein LEO1 homolog	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        108805624 protein LEO1 homolog	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        130502274 protein LEO1 homolog	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        130506613 protein LEO1 homolog	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        108812995 LOW QUALITY PROTEIN: protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        130496809 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        108827956 uncharacterized protein LOC108827956	K15186 EAF; ELL-associated factor 
E        130499979 uncharacterized protein LOC130499979 isoform X1	K15186 EAF; ELL-associated factor 
E        108858450 putative cyclin-T1-1	K15188 CCNT; cyclin T 
E        108805745 cyclin-T1-5	K15188 CCNT; cyclin T 
E        108823152 cyclin-T1-3 isoform X1	K15188 CCNT; cyclin T 
E        108854668 cyclin-T1-5 isoform X1	K15188 CCNT; cyclin T 
E        108822623 cyclin-T1-4	K15188 CCNT; cyclin T 
E        108809718 cyclin-T1-2	K15188 CCNT; cyclin T 
E        108841922 cyclin-T1-4-like	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        108858450 putative cyclin-T1-1	K15188 CCNT; cyclin T 
E        108805745 cyclin-T1-5	K15188 CCNT; cyclin T 
E        108823152 cyclin-T1-3 isoform X1	K15188 CCNT; cyclin T 
E        108854668 cyclin-T1-5 isoform X1	K15188 CCNT; cyclin T 
E        108822623 cyclin-T1-4	K15188 CCNT; cyclin T 
E        108809718 cyclin-T1-2	K15188 CCNT; cyclin T 
E        108841922 cyclin-T1-4-like	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        108840202 probable RNA methyltransferase At5g51130	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        108844041 probable RNA methyltransferase At5g51130	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        108848263 la-related protein 6A	K15191 LARP7; La-related protein 7 
E        108812194 la-related protein 6B	K15191 LARP7; La-related protein 7 
E        108858105 la-related protein 6C	K15191 LARP7; La-related protein 7 
E        108827843 la-related protein 6A isoform X2	K15191 LARP7; La-related protein 7 
E        130512463 la-related protein 6C-like	K15191 LARP7; La-related protein 7 
E        108858450 putative cyclin-T1-1	K15188 CCNT; cyclin T 
E        108805745 cyclin-T1-5	K15188 CCNT; cyclin T 
E        108823152 cyclin-T1-3 isoform X1	K15188 CCNT; cyclin T 
E        108854668 cyclin-T1-5 isoform X1	K15188 CCNT; cyclin T 
E        108822623 cyclin-T1-4	K15188 CCNT; cyclin T 
E        108809718 cyclin-T1-2	K15188 CCNT; cyclin T 
E        108841922 cyclin-T1-4-like	K15188 CCNT; cyclin T 
D      DBIRD complex
D      Others
E        108861573 TATA-binding protein-associated factor BTAF1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        108815858 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        108828167 protein Dr1 homolog isoform X1	K21751 DR1; down-regulator of transcription 1 
E        108813125 uncharacterized protein LOC108813125	K21752 DRAP1; Dr1-associated corepressor 
E        108817954 uncharacterized protein LOC108817954	K21752 DRAP1; Dr1-associated corepressor 
E        108840930 uncharacterized protein LOC108840930	K21752 DRAP1; Dr1-associated corepressor 
E        108861099 uncharacterized protein LOC108861099 isoform X1	K21752 DRAP1; Dr1-associated corepressor 
E        130496651 uncharacterized protein LOC130496651	K21752 DRAP1; Dr1-associated corepressor 
E        108860804 uncharacterized protein LOC108860804 isoform X1	K21752 DRAP1; Dr1-associated corepressor 
E        130494703 U3 small nucleolar RNA-associated protein 25-like	K21752 DRAP1; Dr1-associated corepressor 
E        108854471 uncharacterized protein LOC108854471 isoform X1	K15193 SPTY2D1; protein SPT2 
E        108813297 protein spt2 isoform X1	K15193 SPTY2D1; protein SPT2 
E        108841418 uncharacterized protein LOC108841418	K15193 SPTY2D1; protein SPT2 
E        130508327 uncharacterized protein LOC130508327	K15193 SPTY2D1; protein SPT2 
E        108852958 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        108846503 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        108819470 RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        130494557 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        108815070 RNA polymerase II C-terminal domain phosphatase-like 5	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        108838491 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        108858881 RNA polymerase II C-terminal domain phosphatase-like 5	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        108813325 RNA polymerase II C-terminal domain phosphatase-like 5	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        108810283 RNA polymerase II C-terminal domain phosphatase-like 5	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        108845404 RNA polymerase II C-terminal domain phosphatase-like 5	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        108807646 RNA polymerase II C-terminal domain phosphatase-like 5	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        108812812 LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        108844205 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        108857667 RNA polymerase II C-terminal domain phosphatase-like 5	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        130495467 RNA polymerase II C-terminal domain phosphatase-like 5	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        130494426 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        130512544 RNA polymerase II C-terminal domain phosphatase-like 5	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        108814450 uncharacterized protein LOC108814450	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        108835988 uncharacterized protein LOC108835988	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        108861134 uncharacterized protein LOC108861134	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        108851616 uncharacterized protein LOC108851616	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        108820908 uncharacterized protein LOC108820908	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        108820909 uncharacterized protein LOC108820909	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        108857507 uncharacterized protein LOC108857507 isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        130496241 uncharacterized protein LOC130496241	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        108808739 protein IWS1 homolog 2	K17498 SPN1; transcription factor SPN1 
E        108807258 protein IWS1 homolog 1	K17498 SPN1; transcription factor SPN1 
E        108853706 transcriptional elongation regulator MINIYO isoform X1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        108813449 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        108813232 uncharacterized protein LOC108813232 isoform X1	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        108827755 MADS-box transcription factor 23	K12412 MCM1; pheromone receptor transcription factor 
E        108829458 MADS-box transcription factor 23	K12412 MCM1; pheromone receptor transcription factor 
E        108859965 uncharacterized protein LOC108859965	K24104 GPN; GPN-loop GTPase 
E        108841261 GPN-loop GTPase QQT2 isoform X1	K24104 GPN; GPN-loop GTPase 
E        108849011 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        108812903 GPN-loop GTPase QQT1	K24104 GPN; GPN-loop GTPase 
E        130503009 uncharacterized protein LOC130503009	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        108841929 DNA-directed RNA polymerase III subunit 1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        108806765 DNA-directed RNA polymerase III subunit 2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        108855692 DNA-directed RNA polymerase III subunit 2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        108824128 uncharacterized protein LOC108824128	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        108807086 uncharacterized protein LOC108807086	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        108809415 uncharacterized protein LOC108809415	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        108810933 uncharacterized protein LOC108810933 isoform X1	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        108836393 uncharacterized protein LOC108836393	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        130512386 uncharacterized protein LOC130512386	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        108829174 uncharacterized protein LOC108829174	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        108815941 uncharacterized protein LOC108815941 isoform X1	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        108854038 uncharacterized protein LOC108854038	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        108848658 uncharacterized protein LOC108848658	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        108826864 uncharacterized protein LOC108826864	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        130502671 uncharacterized protein LOC130502671	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        108839871 DNA-directed RNA polymerase III subunit rpc31	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        108858251 pheromone-processing carboxypeptidase KEX1-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        108820853 uncharacterized protein LOC108820853	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        108834605 uncharacterized protein LOC108834605	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        130502418 uncharacterized protein LOC130502418	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        108829034 uncharacterized protein LOC108829034	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        108862915 DNA-directed RNA polymerase III subunit RPC10	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
E        130500097 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        108862191 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108846964 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108857419 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108853457 DNA-directed RNA polymerases IV and V subunit 5B	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108834096 DNA-directed RNA polymerase V subunit 5C	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108846380 DNA-directed RNA polymerase subunit 5-like protein 1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108857658 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108852288 DNA-directed RNA polymerase V subunit 5C	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        130501500 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        130509224 DNA-directed RNA polymerase subunit 5-like protein 1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108849733 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        108824228 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        108805380 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        108863423 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        108821008 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        108809796 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        108820792 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        108825349 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        130495906 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        130495960 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        130505237 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        130510190 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        108814583 transcription factor IIIA	K09191 GTF3A; general transcription factor IIIA 
E        108816432 transcription factor IIIA	K09191 GTF3A; general transcription factor IIIA 
E        108817915 transcription factor IIIA	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        108846488 TATA-box-binding protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108811732 TATA-box-binding protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108857075 TATA-box-binding protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108841486 TATA-box-binding protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108822838 TATA-box-binding protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        130504455 TATA-box-binding protein 2-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        130505904 TATA-box-binding protein 2-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108863441 transcription factor IIIB 60 kDa subunit	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        108852225 LOW QUALITY PROTEIN: transcription factor IIIB 60 kDa subunit	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        108809734 transcription factor IIIB 60 kDa subunit isoform X2	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        108809562 transcription factor IIIB 60 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        108854982 uncharacterized protein LOC108854982	K15198 BDP1; transcription factor TFIIIB component B'' 
E        108822447 uncharacterized protein LOC108822447 isoform X1	K15198 BDP1; transcription factor TFIIIB component B'' 
E        108825215 uncharacterized protein LOC108825215	K15198 BDP1; transcription factor TFIIIB component B'' 
E        130494480 uncharacterized protein LOC130494480 isoform X1	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        108862461 uncharacterized protein LOC108862461	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        108810587 uncharacterized protein LOC108810587 isoform X1	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        108818975 uncharacterized protein LOC108818975 isoform X1	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        108844793 uncharacterized protein LOC108844793	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        108843668 uncharacterized protein LOC108843668 isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        108811602 uncharacterized protein LOC108811602	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        130494404 uncharacterized protein LOC130494404	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        108842780 uncharacterized protein LOC108842780	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
E        108828041 uncharacterized protein LOC108828041 isoform X1	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        108843668 uncharacterized protein LOC108843668 isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        108811602 uncharacterized protein LOC108811602	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        130494404 uncharacterized protein LOC130494404	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        108844793 uncharacterized protein LOC108844793	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        108851983 uncharacterized protein LOC108851983 isoform X3	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        108824308 uncharacterized protein LOC108824308	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        108823074 snRNA-activating protein complex subunit	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        108814411 uncharacterized protein LOC108814411	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        108862085 DNA-directed RNA polymerase I subunit 1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        108858388 DNA-directed RNA polymerase I subunit 2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        108824128 uncharacterized protein LOC108824128	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        108807086 uncharacterized protein LOC108807086	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        108809415 uncharacterized protein LOC108809415	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        108805649 DNA-directed RNA polymerase I subunit rpa49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        130496303 DNA-directed RNA polymerase I subunit rpa49-like	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        108852198 uncharacterized protein LOC108852198	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
E        108809522 uncharacterized protein LOC108809522	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        108862191 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108846964 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108857419 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108853457 DNA-directed RNA polymerases IV and V subunit 5B	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108834096 DNA-directed RNA polymerase V subunit 5C	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108846380 DNA-directed RNA polymerase subunit 5-like protein 1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108857658 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108852288 DNA-directed RNA polymerase V subunit 5C	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        130501500 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        130509224 DNA-directed RNA polymerase subunit 5-like protein 1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        108849733 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        108824228 DNA-directed RNA polymerases II, IV and V subunit 6A	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        108805380 DNA-directed RNA polymerases II and V subunit 8A	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        108863423 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        108821008 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        108809796 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        108820792 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        108825349 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        130495906 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        130495960 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        130505237 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        130510190 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        108846488 TATA-box-binding protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108811732 TATA-box-binding protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108857075 TATA-box-binding protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108841486 TATA-box-binding protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        108822838 TATA-box-binding protein 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        130504455 TATA-box-binding protein 2-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        130505904 TATA-box-binding protein 2-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
E        108833657 high mobility group B protein 6 isoform X2	K09273 UBTF; upstream-binding transcription factor 
E        108836692 high mobility group B protein 13	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        108851471 uncharacterized protein LOC108851471 isoform X1	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        108834029 RNA polymerase I-specific transcription initiation factor rrn3 isoform X2	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        108810672 uncharacterized protein LOC108810672	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        108844008 RNA polymerase I-specific transcription initiation factor rrn3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        108856931 uncharacterized protein LOC108856931 isoform X1	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        108833632 transcription elongation factor SPT4 homolog 1-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        108806320 transcription elongation factor SPT4 homolog 2	K15171 SUPT4H1; transcription elongation factor SPT4 
E        108847208 putative transcription elongation factor SPT5 homolog 2 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        108847493 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        130510051 putative transcription elongation factor SPT5 homolog 2	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        108817498 ISWI chromatin-remodeling complex ATPase CHR17	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        108817635 ISWI chromatin-remodeling complex ATPase CHR17 isoform X1	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        108861071 ISWI chromatin-remodeling complex ATPase CHR11	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        19816386 rpoA; RNA polymerase alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        19816329 rpoB; RNA polymerase beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        19816327 rpoC2; RNA polymerase beta'' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        19816328 rpoC1; RNA polymerase beta' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        130497787 DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
D      Sigma factors
E        108821546 RNA polymerase sigma factor sigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        108849417 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like	K03093 sigI; RNA polymerase sigma-I factor 
E        108823836 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial	K03093 sigI; RNA polymerase sigma-I factor 
E        108836123 RNA polymerase sigma factor sigC	K03093 sigI; RNA polymerase sigma-I factor 
E        130499518 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like	K03093 sigI; RNA polymerase sigma-I factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        108812864 transcription initiation factor IIB-1	K03124 TFIIB; transcription initiation factor TFIIB 
E        108826813 plant-specific TFIIB-related protein 2	K03124 TFIIB; transcription initiation factor TFIIB 
E        108854452 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        108861408 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        108844371 transcription initiation factor IIB-1	K03124 TFIIB; transcription initiation factor TFIIB 
E        108841609 plant-specific TFIIB-related protein 1-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        108807449 plant-specific TFIIB-related protein 2	K03124 TFIIB; transcription initiation factor TFIIB 
E        108810887 plant-specific TFIIB-related protein 2-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        108834977 transcription initiation factor IIB-1	K03124 TFIIB; transcription initiation factor TFIIB 
E        108853564 plant-specific TFIIB-related protein 2-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        108835566 transcription factor efuD	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        108840672 uncharacterized protein LOC108840672	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        108814190 transcription factor efuD	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
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#Last updated: April 9, 2024