+D #

  Transfer RNA Biogenesis - Salinarchaeum sp. IM2453

% ! AEukaryotic type B 5'processing factors C Ribonucrease P D K0C01_06645 ribonuclease P protein component 1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D K0C01_08665 RNase P/RNase MRP subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D K0C01_08630 ribonuclease P K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D K0C01_01830 ribonuclease P K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5] B 3'processing and CCA adding factors C 3'processing factors D K0C01_06070 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] C CCA adding factors B tRNA spricing factors C tRNA splicing endonuclease complex C tRNA splicing ligase complex D K0C01_07665 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D K0C01_10740 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D K0C01_07655 archease K24956 ZBTB8OS; protein archease C Other tRNA splicing factors B tRNA transport factors C tRNA export factors D K0C01_01075 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha D K0C01_06100 GTP-binding protein K03231 EEF1A; elongation factor 1-alpha C tRNA import factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D K0C01_03970 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D K0C01_07775 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D K0C01_04415 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D K0C01_05860 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D K0C01_05880 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D K0C01_02255 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D K0C01_04550 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] C Other AARSs D K0C01_03830 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D K0C01_04050 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D K0C01_05585 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D K0C01_00310 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D K0C01_09410 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D K0C01_03930 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D K0C01_03690 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D K0C01_06870 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D K0C01_06865 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D K0C01_08130 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D K0C01_00810 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C Trans-editing factors D K0C01_08100 hypothetical protein K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D K0C01_10150 alanyl-tRNA editing protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] C AARS associated factors D K0C01_04435 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] B tRNA modification factors C Deaminases C Dihydorouridine synthases C Methylthiotransferase C Methyltransferases D K0C01_06935 tRNA (guanine(26)-N(2))-dimethyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D K0C01_02325 class I SAM-dependent methyltransferase family protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D K0C01_06750 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D K0C01_08385 methyltransferase domain-containing protein K15444 TRM9; tRNA (uracil-5-)-methyltransferase TRM9 [EC:2.1.1.229] D K0C01_05745 twy1; 4-demethylwyosine synthase TYW1 K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] D K0C01_04640 class I SAM-dependent methyltransferase family protein K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114] C Psudouridine synthases D K0C01_03685 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D K0C01_01785 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D K0C01_03190 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D K0C01_03805 tRNA pseudouridine(54/55) synthase Pus10 K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25] C Thiolation factors C KEOPS/EKC complex C Elongator complex D K0C01_03470 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311] C Elongator related proteins C Other tRNA modification factors D K0C01_05555 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] B tRNA degradation factors C TRAMP complex C Rapid tRNA decay (RTD) pathway factors C Other tRNA degradation factors # AProkaryotic type B 5'processing factors C Ribonucrease P B 3'processing and CCA adding factors C 3'processing factors D K0C01_06070 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] C CCA adding factors D K0C01_07110 CCA tRNA nucleotidyltransferase K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] B tRNA spricing factors C tRNA splicing endonucleases D K0C01_06075 endA; tRNA-intron lyase K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16] C tRNA splicing ligases D K0C01_07665 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D K0C01_10740 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] C Other tRNA splicing factors D K0C01_03920 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] B tRNA transport factors C tRNA export factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D K0C01_05860 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D K0C01_05880 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D K0C01_03730 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D K0C01_07775 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] C Other AARSs D K0C01_08130 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D K0C01_00810 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D K0C01_05585 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D K0C01_04415 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D K0C01_03830 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D K0C01_03930 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D K0C01_02255 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D K0C01_00310 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D K0C01_09410 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D K0C01_03970 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D K0C01_04550 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D K0C01_06870 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D K0C01_06865 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D K0C01_03690 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D K0C01_03140 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] C Trans-editing factors D K0C01_08100 hypothetical protein K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D K0C01_10150 alanyl-tRNA editing protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] B tRNA modification factors C Deaminases C Dihydorouridine synthases C Methylthiotransferases C Methyltransferases D K0C01_07580 trmY; tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257] D K0C01_00935 hypothetical protein K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256] D K0C01_07590 TIGR01177 family methyltransferase K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] D K0C01_00485 tRNA (cytidine(56)-2'-O)-methyltransferase K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] C Psudouridine synthases D K0C01_03685 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D K0C01_01785 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D K0C01_03190 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] C Thiolation factors C KEOPS/EKC complex D K0C01_04505 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase K15904 kae1-bud32; bifunctional N6-L-threonylcarbamoyladenine synthase / protein kinase Bud32 [EC:2.3.1.234 2.7.11.1] D K0C01_04480 KEOPS complex subunit Cgi121 K09119 cgi121; KEOPS complex subunit Cgi121 D K0C01_03210 KEOPS complex Pcc1-like subunit K09741 pcc1; KEOPS complex subunit Pcc1 C Other tRNA modification factors D K0C01_08040 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D K0C01_08030 6-pyruvoyl tetrahydropterin synthase family protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D K0C01_11295 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D K0C01_08035 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D K0C01_07490 tgtA; tRNA guanosine(15) transglycosylase TgtA K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48] D K0C01_04760 tRNA(Ile)(2)-agmatinylcytidine synthase K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22] D K0C01_05555 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] B tRNA degradation factors C K0C01_07435 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C K0C01_02510 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024