+D GENES KO
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KEGG Orthology (KO) - Staphylococcus capitis subsp. capitis
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:scap00010]
D AYP1020_0845 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYP1020_0232 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AYP1020_0979 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AYP1020_1670 fbp; Fructose-1,6-bisphosphatase class 3 K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D AYP1020_1778 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D AYP1020_1312 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AYP1020_0143 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AYP1020_0141 gapA1; Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AYP1020_0969 gapA2; Glyceraldehyde-3-phosphate dehydrogenase 2 K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D AYP1020_0142 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AYP1020_2143 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYP1020_1605 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYP1020_0144 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AYP1020_0145 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYP1020_0978 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AYP1020_1784 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D AYP1020_0417 pdhA; Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D AYP1020_0418 pdhB; Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D AYP1020_0419 pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AYP1020_0420 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0817 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0598 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D AYP1020_0599 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D AYP1020_1769 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1013 acsA_1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AYP1020_1785 acsA_2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AYP1020_1517 mro; Aldose 1-epimerase precursor K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AYP1020_0378 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYP1020_1063 pckA; Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D AYP1020_0739 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AYP1020_1707 glcB; PTS system glucoside-specific EIICBA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:scap00020]
D AYP1020_0976 citZ; Citrate synthase 2 K01647 CS; citrate synthase [EC:2.3.3.1]
D AYP1020_0658 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D AYP1020_0975 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AYP1020_0724 odhA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AYP1020_0723 odhB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AYP1020_0420 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0817 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0598 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D AYP1020_0599 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D AYP1020_0557 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AYP1020_0556 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AYP1020_0473 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AYP1020_0474 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AYP1020_0472 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AYP1020_1097 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AYP1020_0057 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AYP1020_1922 mqo2_2; putative malate:quinone oxidoreductase 2 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D AYP1020_1782 mqo2_1; putative malate:quinone oxidoreductase 2 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D AYP1020_1547 mqo1; putative malate:quinone oxidoreductase 1 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D AYP1020_0438 cfiB_1; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D AYP1020_1063 pckA; Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D AYP1020_0417 pdhA; Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D AYP1020_0418 pdhB; Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D AYP1020_0419 pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:scap00030]
D AYP1020_0232 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AYP1020_0807 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AYP1020_1197 pgl; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D AYP1020_0810 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AYP1020_0529 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AYP1020_0650 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AYP1020_1056 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AYP1020_1516 rpiA; Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D AYP1020_2319 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D AYP1020_2320 hxlB; 3-hexulose-6-phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D AYP1020_1327 deoC2; Deoxyribose-phosphate aldolase 2 K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D AYP1020_1689 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D AYP1020_1324 deoB; Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D AYP1020_0378 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYP1020_2232 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AYP1020_1432 Glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D AYP1020_1656 xylB_1; Xylulose kinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D AYP1020_1778 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D AYP1020_1312 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AYP1020_1670 fbp; Fructose-1,6-bisphosphatase class 3 K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D AYP1020_0979 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:scap00040]
D AYP1020_1654 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYP1020_0529 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AYP1020_1521 araB; Ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D AYP1020_1688 xylB_2; Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
C 00051 Fructose and mannose metabolism [PATH:scap00051]
D AYP1020_1227 iolC; 5-dehydro-2-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AYP1020_1860 yvyI; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AYP1020_1333 gmuF; putative mannose-6-phosphate isomerase GmuF K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AYP1020_0979 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AYP1020_1670 fbp; Fructose-1,6-bisphosphatase class 3 K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D AYP1020_1344 mtlD; Mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D AYP1020_0067 lacC_1; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D AYP1020_1778 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D AYP1020_1312 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AYP1020_0143 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AYP1020_0068 fruA; EIIABC-Fru K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D AYP1020_1859 manP; EIIBCA-Man K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D AYP1020_1343 mtlF; Mannitol-specific phosphotransferase enzyme IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D AYP1020_1341 mtlA; EIICB-Mtl K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:scap00052]
D AYP1020_1517 mro; Aldose 1-epimerase precursor K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AYP1020_1654 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYP1020_0378 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYP1020_0845 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYP1020_1387 lacC_2; Tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D AYP1020_0979 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AYP1020_1386 lacD; Tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D AYP1020_1388 lacB; Galactose-6-phosphate isomerase subunit LacB K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D AYP1020_1389 lacA; Galactose-6-phosphate isomerase subunit LacA K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D AYP1020_1383 lacG; 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D AYP1020_1385 lacF; Lactose-specific phosphotransferase enzyme IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D AYP1020_1384 lacE; EIICB-Lac K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D AYP1020_1228 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D AYP1020_0809 malL; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:scap00500]
D AYP1020_1568 sacX; PTS system sac EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AYP1020_1494 PTS system EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AYP1020_1228 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D AYP1020_0809 malL; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D AYP1020_1654 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYP1020_2100 Endoglucanase E1 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D AYP1020_0739 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AYP1020_1503 malP; PTS system maltose-specific EIICB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D AYP1020_0378 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYP1020_0845 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYP1020_0232 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AYP1020_1227 iolC; 5-dehydro-2-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:scap00520]
D AYP1020_2099 csn; Chitosanase precursor K01233 csn; chitosanase [EC:3.2.1.132]
D AYP1020_0739 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AYP1020_1005 ptsG; EIICBA-Glc K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D AYP1020_0069 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D AYP1020_2318 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D AYP1020_1227 iolC; 5-dehydro-2-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AYP1020_1340 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AYP1020_1345 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D AYP1020_2231 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AYP1020_1493 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D AYP1020_1286 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AYP1020_1311 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AYP1020_0103 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AYP1020_1297 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AYP1020_1707 glcB; PTS system glucoside-specific EIICBA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D AYP1020_0845 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYP1020_0378 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYP1020_1654 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYP1020_0232 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AYP1020_1860 yvyI; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AYP1020_1333 gmuF; putative mannose-6-phosphate isomerase GmuF K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:scap00620]
D AYP1020_1013 acsA_1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AYP1020_1785 acsA_2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AYP1020_0598 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D AYP1020_0599 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D AYP1020_0417 pdhA; Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D AYP1020_0418 pdhB; Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D AYP1020_0419 pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AYP1020_0420 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0817 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0991 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYP1020_2338 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AYP1020_0978 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AYP1020_0980 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AYP1020_0826 accB_1; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AYP1020_0900 accB_2; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AYP1020_0825 cfiB_2; 2-oxoglutarate carboxylase small subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AYP1020_0899 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AYP1020_0981 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AYP1020_0711 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1708 ydaP; Putative thiamine pyrophosphate-containing protein YdaP K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D AYP1020_1769 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYP1020_1679 ldhD_1; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D AYP1020_1730 ldhD_2; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D AYP1020_1673 aldA_1; Lactaldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D AYP1020_0843 pksB; putative polyketide biosynthesis zinc-dependent hydrolase PksB K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D AYP1020_2355 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D AYP1020_0982 maeB; NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D AYP1020_0438 cfiB_1; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D AYP1020_0057 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AYP1020_1922 mqo2_2; putative malate:quinone oxidoreductase 2 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D AYP1020_1782 mqo2_1; putative malate:quinone oxidoreductase 2 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D AYP1020_1547 mqo1; putative malate:quinone oxidoreductase 1 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D AYP1020_1097 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AYP1020_2097 maeA; putative NAD-dependent malic enzyme 2 K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D AYP1020_1063 pckA; Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D AYP1020_1784 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D AYP1020_2109 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_2323 yhfS; Putative acetyl-CoA C-acetyltransferase YhfS K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_1245 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:scap00630]
D AYP1020_1013 acsA_1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AYP1020_1785 acsA_2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AYP1020_0057 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AYP1020_0976 citZ; Citrate synthase 2 K01647 CS; citrate synthase [EC:2.3.3.1]
D AYP1020_0658 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D AYP1020_2109 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_2323 yhfS; Putative acetyl-CoA C-acetyltransferase YhfS K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_0642 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D AYP1020_0200 ghrB_1; Glyoxylate/hydroxypyruvate reductase B K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D AYP1020_2306 ppaX; Pyrophosphatase PpaX K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AYP1020_2071 gph; Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AYP1020_2321 5'-nucleotidase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AYP1020_0618 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AYP1020_1299 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AYP1020_0834 gcvPA; putative glycine dehydrogenase [decarboxylating] subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D AYP1020_0833 gcvPB; putative glycine dehydrogenase [decarboxylating] subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D AYP1020_0835 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AYP1020_0420 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0817 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0176 gcvH; Octanoyl/lipoyl carrier protein K02437 gcvH; glycine cleavage system H protein
D AYP1020_1610 garK_2; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AYP1020_0107 garK_1; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AYP1020_1673 aldA_1; Lactaldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D AYP1020_0004 Formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D AYP1020_1486 Putative formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
C 00640 Propanoate metabolism [PATH:scap00640]
D AYP1020_1013 acsA_1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AYP1020_1785 acsA_2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AYP1020_0991 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYP1020_2338 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AYP1020_0816 bfmBAA; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D AYP1020_0815 bfmBAB; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D AYP1020_0814 pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D AYP1020_0420 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0817 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_1559 yhfP; Putative quinone oxidoreductase YhfP K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D AYP1020_0980 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AYP1020_0826 accB_1; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AYP1020_0900 accB_2; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AYP1020_0825 cfiB_2; 2-oxoglutarate carboxylase small subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AYP1020_0899 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AYP1020_0981 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AYP1020_1773 puuE; 4-aminobutyrate aminotransferase PuuE K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AYP1020_0556 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AYP1020_0557 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AYP1020_1769 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:scap00650]
D AYP1020_2109 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_2323 yhfS; Putative acetyl-CoA C-acetyltransferase YhfS K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_0473 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AYP1020_0474 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AYP1020_0472 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AYP1020_1773 puuE; 4-aminobutyrate aminotransferase PuuE K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AYP1020_0598 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D AYP1020_0599 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D AYP1020_1715 pksG; Polyketide biosynthesis 3-hydroxy-3-methylglutaryl-ACP synthase PksG K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D AYP1020_2110 scoA; Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D AYP1020_2111 scoB; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D AYP1020_1947 bdhA; D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D AYP1020_1705 yjmD; putative zinc-type alcohol dehydrogenase-like protein YjmD K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D AYP1020_1768 alsS; Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AYP1020_1242 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AYP1020_1243 acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AYP1020_1767 aldC; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D AYP1020_1631 gutB; Sorbitol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D AYP1020_1850 butA; Diacetyl reductase [(S)-acetoin forming] K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:scap00660]
D AYP1020_1768 alsS; Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AYP1020_1242 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AYP1020_1243 acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AYP1020_1767 aldC; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D AYP1020_0556 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AYP1020_0557 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AYP1020_1247 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AYP1020_1248 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AYP1020_1246 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:scap00562]
D AYP1020_1985 hlb; beta hemolysin K01114 plc; phospholipase C [EC:3.1.4.3]
D AYP1020_0431 suhB_1; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AYP1020_1488 suhB_2; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AYP1020_0143 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:scap00190]
D AYP1020_0211 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D AYP1020_0208 yjlD; NADH dehydrogenase-like protein YjlD K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D AYP1020_0473 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AYP1020_0474 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AYP1020_0472 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AYP1020_0440 ctaB2; Protoheme IX farnesyltransferase 2 K02257 COX10; heme o synthase [EC:2.5.1.141]
D AYP1020_0439 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D AYP1020_0381 qoxD; Quinol oxidase subunit 4 K02829 qoxD; cytochrome aa3-600 menaquinol oxidase subunit IV [EC:7.1.1.5]
D AYP1020_0382 qoxC; Quinol oxidase subunit 3 K02828 qoxC; cytochrome aa3-600 menaquinol oxidase subunit III [EC:7.1.1.5]
D AYP1020_0383 qoxB; putative quinol oxidase subunit 1 K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5]
D AYP1020_0384 qoxA; putative quinol oxidase subunit 2 precursor K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5]
D AYP1020_0409 ythA; Putative cytochrome bd menaquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AYP1020_0410 ythB; Putative cytochrome bd menaquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AYP1020_1291 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AYP1020_1289 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AYP1020_1290 atpG; F-ATPase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AYP1020_1292 atpH; F-type ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AYP1020_1288 atpC; F-ATPase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AYP1020_1295 atpB; F-ATPase subunit 6 K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AYP1020_1293 atpF; F-type ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AYP1020_1294 atpE; Lipid-binding protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AYP1020_1195 ppaC; putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D AYP1020_1648 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:scap00680]
D AYP1020_0004 Formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D AYP1020_1486 Putative formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AYP1020_1299 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AYP1020_0145 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYP1020_0057 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AYP1020_1778 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D AYP1020_1312 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AYP1020_1670 fbp; Fructose-1,6-bisphosphatase class 3 K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D AYP1020_0979 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AYP1020_2320 hxlB; 3-hexulose-6-phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D AYP1020_2319 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D AYP1020_0991 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYP1020_2338 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AYP1020_1013 acsA_1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AYP1020_1785 acsA_2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AYP1020_2143 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYP1020_1605 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYP1020_0144 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AYP1020_1003 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00910 Nitrogen metabolism [PATH:scap00910]
D AYP1020_1585 narG; Respiratory nitrate reductase 1 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D AYP1020_1584 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D AYP1020_1582 narX; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D AYP1020_1588 nasD; Nitrite reductase [NAD(P)H] K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D AYP1020_1587 nasE; Assimilatory nitrite reductase [NAD(P)H] small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D AYP1020_0191 Nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D AYP1020_2032 Nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D AYP1020_0228 gluD; NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D AYP1020_0618 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AYP1020_2202 gltA_2; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AYP1020_2203 gltB; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AYP1020_1835 arcC2; Carbamate kinase 2 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D AYP1020_1960 arcC1; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:scap00920]
D AYP1020_1802 sat; Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D AYP1020_1801 cysC; putative adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D AYP1020_0984 nrnA_1; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D AYP1020_1808 cysH; Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D AYP1020_1807 cysJ; Sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D AYP1020_1806 cysI; Sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D AYP1020_0075 DoxX K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D AYP1020_2277 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AYP1020_2245 cysK; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AYP1020_2052 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D AYP1020_2116 metI; Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AYP1020_2183 mccB; Cystathionine gamma-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:scap00061]
D AYP1020_0980 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AYP1020_0826 accB_1; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AYP1020_0900 accB_2; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AYP1020_0825 cfiB_2; 2-oxoglutarate carboxylase small subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AYP1020_0899 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AYP1020_0981 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AYP1020_0541 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D AYP1020_0539 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AYP1020_0247 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AYP1020_0248 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AYP1020_0540 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYP1020_2307 fabG_3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYP1020_0589 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYP1020_1285 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AYP1020_0269 fabI; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AYP1020_2322 yhfT; putative acyl--CoA ligase YhfT K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:scap00071]
D AYP1020_2109 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_2323 yhfS; Putative acetyl-CoA C-acetyltransferase YhfS K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_2322 yhfT; putative acyl--CoA ligase YhfT K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:scap00561]
D AYP1020_1610 garK_2; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AYP1020_0107 garK_1; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_0017 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D AYP1020_0018 dhaL; PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D AYP1020_0019 dhaM; PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D AYP1020_0609 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AYP1020_0538 plsX; Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AYP1020_0661 plsY; G3P acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AYP1020_1006 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AYP1020_1176 dagK; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AYP1020_1911 geh1; Lipase precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D AYP1020_2083 geh2; Lipase 2 precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D AYP1020_1943 lipA_2; Lipase 1 precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D AYP1020_0274 ugtP; Processive diacylglycerol glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D AYP1020_0087 ltaS; Lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:scap00564]
D AYP1020_0782 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D AYP1020_0610 glpD; Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D AYP1020_0661 plsY; G3P acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AYP1020_1006 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AYP1020_0010 tagD; Glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D AYP1020_1176 dagK; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AYP1020_1985 hlb; beta hemolysin K01114 plc; phospholipase C [EC:3.1.4.3]
D AYP1020_1044 ytpA; Phospholipase YtpA K01048 pldB; lysophospholipase [EC:3.1.1.5]
D AYP1020_0229 glpQ1_1; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AYP1020_1000 ugpQ; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AYP1020_0444 glpQ1_2; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AYP1020_0570 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D AYP1020_0592 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D AYP1020_1275 cls_2; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D AYP1020_0625 cls_1; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D AYP1020_1184 pcrB; Heptaprenylglyceryl phosphate synthase K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-]
D AYP1020_0128 Putative acetyltransferase K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-]
C 00565 Ether lipid metabolism
D AYP1020_1985 hlb; beta hemolysin K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:scap00230]
D AYP1020_0801 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AYP1020_1324 deoB; Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D AYP1020_0378 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYP1020_2232 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AYP1020_0394 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AYP1020_0398 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D AYP1020_0396 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AYP1020_0393 purL; Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D AYP1020_0391 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D AYP1020_0392 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AYP1020_0395 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D AYP1020_0389 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D AYP1020_0388 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D AYP1020_0390 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D AYP1020_1186 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AYP1020_0397 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AYP1020_0926 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AYP1020_2303 yfkN_4; Trifunctional nucleotide phosphoesterase protein YfkN precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AYP1020_1328 deoD; Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AYP1020_0495 Laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AYP1020_2242 hpt; Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D AYP1020_2156 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AYP1020_0777 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AYP1020_0476 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D AYP1020_2154 xpt; Xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D AYP1020_2157 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AYP1020_0645 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D AYP1020_0516 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D AYP1020_0100 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AYP1020_0101 nrdF; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AYP1020_1797 nrdD; Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D AYP1020_2309 dgk; Deoxyguanosine kinase K15518 dgk; deoxyguanosine kinase [EC:2.7.1.113]
D AYP1020_0925 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AYP1020_1647 gppA; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AYP1020_1659 ywaC; GTP pyrophosphokinase YwaC K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D AYP1020_0264 yjbM; GTP pyrophosphokinase YjbM K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D AYP1020_2047 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AYP1020_2308 dck; Deoxyadenosine/deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D AYP1020_1900 yfkN_3; Trifunctional nucleotide phosphoesterase protein YfkN precursor K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D AYP1020_0597 metallophosphoesterase, MG_246/family K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D AYP1020_1404 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AYP1020_1801 cysC; putative adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D AYP1020_1802 sat; Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D AYP1020_1464 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D AYP1020_1463 ureB; Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D AYP1020_1462 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D AYP1020_1835 arcC2; Carbamate kinase 2 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D AYP1020_1960 arcC1; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:scap00240]
D AYP1020_0510 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AYP1020_0509 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AYP1020_0507 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AYP1020_0508 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D AYP1020_1752 pyrD; Dihydroorotate dehydrogenase (quinone) K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D AYP1020_0512 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D AYP1020_0511 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D AYP1020_0567 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D AYP1020_0777 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AYP1020_1314 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D AYP1020_0785 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D AYP1020_0904 udk; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D AYP1020_2303 yfkN_4; Trifunctional nucleotide phosphoesterase protein YfkN precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AYP1020_1298 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D AYP1020_0505 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D AYP1020_1900 yfkN_3; Trifunctional nucleotide phosphoesterase protein YfkN precursor K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D AYP1020_0597 metallophosphoesterase, MG_246/family K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D AYP1020_1325 pdp_1; Pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D AYP1020_0866 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D AYP1020_1797 nrdD; Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D AYP1020_0100 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AYP1020_0101 nrdF; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AYP1020_2308 dck; Deoxyadenosine/deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D AYP1020_0886 tadA_1; tRNA-specific adenosine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D AYP1020_2214 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D AYP1020_1306 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D AYP1020_0744 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:scap00250]
D AYP1020_0786 ansA; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AYP1020_1221 ramA; (R)-stereoselective amidase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D AYP1020_0989 ald2; Alanine dehydrogenase 2 K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D AYP1020_0231 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AYP1020_0230 argH1; Argininosuccinate lyase 1 K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AYP1020_2047 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AYP1020_1186 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AYP1020_0507 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AYP1020_1773 puuE; 4-aminobutyrate aminotransferase PuuE K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AYP1020_2202 gltA_2; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AYP1020_2203 gltB; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AYP1020_0228 gluD; NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D AYP1020_1722 rocA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D AYP1020_0618 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AYP1020_0510 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AYP1020_0509 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AYP1020_0392 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AYP1020_1340 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AYP1020_0394 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:scap00260]
D AYP1020_0635 yclM; Aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYP1020_0701 lysC; Aspartokinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYP1020_0702 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AYP1020_0636 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AYP1020_0638 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D AYP1020_0637 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D AYP1020_0623 ltaE; Low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D AYP1020_1299 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AYP1020_1610 garK_2; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AYP1020_0107 garK_1; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AYP1020_2143 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYP1020_1605 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYP1020_0144 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AYP1020_1003 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYP1020_2298 Putative pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D AYP1020_0834 gcvPA; putative glycine dehydrogenase [decarboxylating] subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D AYP1020_0833 gcvPB; putative glycine dehydrogenase [decarboxylating] subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D AYP1020_0835 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AYP1020_0420 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0817 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0176 gcvH; Octanoyl/lipoyl carrier protein K02437 gcvH; glycine cleavage system H protein
D AYP1020_1791 betA; Choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D AYP1020_1792 gbsA; Betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D AYP1020_2183 mccB; Cystathionine gamma-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D AYP1020_1684 sdhA; L-serine dehydratase, alpha chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AYP1020_1685 sdhB; L-serine dehydratase, beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AYP1020_1249 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AYP1020_0681 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AYP1020_0680 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:scap00270]
D AYP1020_2277 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AYP1020_2245 cysK; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AYP1020_2183 mccB; Cystathionine gamma-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D AYP1020_2115 metC; Cystathionine beta-lyase MetC K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AYP1020_2182 mccA; O-acetylserine dependent cystathionine beta-synthase K17216 mccA; cystathionine beta-synthase (O-acetyl-L-serine) [EC:2.5.1.134]
D AYP1020_2114 yitJ; Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D AYP1020_2113 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AYP1020_1062 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AYP1020_0896 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D AYP1020_0495 Laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AYP1020_1731 dapL; LL-diaminopimelate aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D AYP1020_0998 msrC; Free methionine-R-sulfoxide reductase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D AYP1020_1321 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D AYP1020_0635 yclM; Aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYP1020_0701 lysC; Aspartokinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYP1020_0702 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AYP1020_0636 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AYP1020_2052 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D AYP1020_2116 metI; Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AYP1020_2305 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AYP1020_1769 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYP1020_0057 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AYP1020_1684 sdhA; L-serine dehydratase, alpha chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AYP1020_1685 sdhB; L-serine dehydratase, beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AYP1020_1003 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:scap00280]
D AYP1020_2305 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AYP1020_0534 ldh; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D AYP1020_0816 bfmBAA; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D AYP1020_0815 bfmBAB; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D AYP1020_0814 pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D AYP1020_0420 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0817 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_2110 scoA; Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D AYP1020_2111 scoB; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D AYP1020_2109 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_2323 yhfS; Putative acetyl-CoA C-acetyltransferase YhfS K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_1715 pksG; Polyketide biosynthesis 3-hydroxy-3-methylglutaryl-ACP synthase PksG K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:scap00290]
D AYP1020_1249 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AYP1020_1247 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AYP1020_1248 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AYP1020_1246 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D AYP1020_1768 alsS; Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AYP1020_1242 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AYP1020_1243 acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AYP1020_1244 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AYP1020_1241 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AYP1020_2305 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AYP1020_0534 ldh; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D AYP1020_1245 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:scap00300]
D AYP1020_0636 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AYP1020_0635 yclM; Aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYP1020_0701 lysC; Aspartokinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYP1020_0702 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AYP1020_0703 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AYP1020_0704 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D AYP1020_1031 Putative dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AYP1020_1846 dapE; putative succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AYP1020_0708 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AYP1020_0705 dapH; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D AYP1020_0370 patA_1; Putative N-acetyl-LL-diaminopimelate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D AYP1020_1269 murF_1; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:scap00310]
D AYP1020_0723 odhB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AYP1020_0420 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0817 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_2109 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_2323 yhfS; Putative acetyl-CoA C-acetyltransferase YhfS K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_1030 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:scap00220]
D AYP1020_1837 arcB; Ornithine carbamoyltransferase, catabolic K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D AYP1020_1959 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D AYP1020_0231 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AYP1020_0230 argH1; Argininosuccinate lyase 1 K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AYP1020_1348 arg; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D AYP1020_1464 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D AYP1020_1463 ureB; Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D AYP1020_1462 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D AYP1020_1838 arcA; Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D AYP1020_1191 nos; Nitric oxide synthase oxygenase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D AYP1020_0392 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AYP1020_0618 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AYP1020_0510 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AYP1020_0509 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AYP1020_1835 arcC2; Carbamate kinase 2 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D AYP1020_1960 arcC1; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D AYP1020_0228 gluD; NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
C 00330 Arginine and proline metabolism [PATH:scap00330]
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_2212 speG_2; Spermidine N(1)-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D AYP1020_2017 speG_1; Spermidine N(1)-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D AYP1020_1191 nos; Nitric oxide synthase oxygenase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D AYP1020_1348 arg; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D AYP1020_0227 rocD2; Ornithine aminotransferase 2 K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D AYP1020_0805 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D AYP1020_1045 fadM; Proline dehydrogenase 1 K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D AYP1020_1722 rocA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D AYP1020_1030 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:scap00340]
D AYP1020_0093 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AYP1020_2056 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D AYP1020_1512 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D AYP1020_1511 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D AYP1020_1514 hutG; Formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism
D AYP1020_0093 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:scap00360]
D AYP1020_0093 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AYP1020_1030 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AYP1020_2148 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00380 Tryptophan metabolism [PATH:scap00380]
D AYP1020_0723 odhB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AYP1020_0420 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0817 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_2109 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_2323 yhfS; Putative acetyl-CoA C-acetyltransferase YhfS K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_0642 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:scap00400]
D AYP1020_1017 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D AYP1020_0775 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D AYP1020_0172 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D AYP1020_0893 aroE; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D AYP1020_0836 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D AYP1020_0774 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D AYP1020_0776 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D AYP1020_0674 trpE_1; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AYP1020_0676 trpG_2; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AYP1020_0677 trpD2; Anthranilate phosphoribosyltransferase 2 K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D AYP1020_0679 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D AYP1020_0678 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D AYP1020_0681 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AYP1020_0680 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AYP1020_0934 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D AYP1020_0672 tyrC; Arogenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AYP1020_1192 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D AYP1020_0093 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:scap00410]
D AYP1020_1763 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D AYP1020_1773 puuE; 4-aminobutyrate aminotransferase PuuE K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1764 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:scap00430]
D AYP1020_1692 capD; Capsule biosynthesis protein CapD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AYP1020_0989 ald2; Alanine dehydrogenase 2 K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D AYP1020_0228 gluD; NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D AYP1020_2338 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AYP1020_0991 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:scap00450]
D AYP1020_2116 metI; Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AYP1020_2115 metC; Cystathionine beta-lyase MetC K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AYP1020_2114 yitJ; Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D AYP1020_2113 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AYP1020_0187 csd_1; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D AYP1020_2124 csd_2; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D AYP1020_0130 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AYP1020_1802 sat; Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D AYP1020_2222 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:scap00460]
D AYP1020_1692 capD; Capsule biosynthesis protein CapD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AYP1020_0786 ansA; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AYP1020_1299 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:scap00470]
D AYP1020_1263 alr1; Alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D AYP1020_0707 alr2; Alanine racemase 2 K01775 alr; alanine racemase [EC:5.1.1.1]
D AYP1020_1030 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AYP1020_1270 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AYP1020_0202 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AYP1020_0204 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYP1020_0392 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AYP1020_0475 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AYP1020_0491 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AYP1020_0708 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AYP1020_1371 alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
D AYP1020_1968 diaminopimelate epimerase K01780 cntK; histidine racemase [EC:5.1.1.24]
C 00480 Glutathione metabolism [PATH:scap00480]
D AYP1020_1692 capD; Capsule biosynthesis protein CapD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AYP1020_0898 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D AYP1020_0212 pepA_1; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AYP1020_0975 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AYP1020_0810 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AYP1020_0807 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AYP1020_1809 bsaA_2; Glutathione peroxidase-like protein BsaA K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D AYP1020_0614 bsaA_1; Glutathione peroxidase-like protein BsaA K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D AYP1020_0347 atl_2; AtlE K23989 lytD; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:3.2.1.96]
D AYP1020_0374 atl_3; AtlE K13714 atl; bifunctional autolysin [EC:3.5.1.28 3.2.1.96]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:scap00542]
D AYP1020_0112 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:scap00541]
D AYP1020_1654 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYP1020_1860 yvyI; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AYP1020_1333 gmuF; putative mannose-6-phosphate isomerase GmuF K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AYP1020_2231 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AYP1020_1297 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:scap00550]
D AYP1020_1286 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AYP1020_1311 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AYP1020_0103 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AYP1020_1020 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AYP1020_0491 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AYP1020_1270 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AYP1020_1269 murF_1; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AYP1020_0867 dgkA; Undecaprenol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D AYP1020_0569 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AYP1020_0051 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AYP1020_0734 phosphatidylglycerophosphatase B K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AYP1020_0490 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AYP1020_0735 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AYP1020_0760 ponA; Penicillin-binding protein 1A/1B K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AYP1020_1916 dacA; D-alanyl-D-alanine carboxypeptidase DacA precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AYP1020_0275 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D AYP1020_1170 UDP-N-acetylmuramate--L-alanine ligase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D AYP1020_1169 cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D AYP1020_1437 femX; Lipid II:glycine glycyltransferase K11693 femX; peptidoglycan pentaglycine glycine transferase (the first glycine) [EC:2.3.2.16]
D AYP1020_0683 femA_1; Aminoacyltransferase FemA K11694 femA; peptidoglycan pentaglycine glycine transferase (the second and third glycine) [EC:2.3.2.17]
D AYP1020_0684 femB; Aminoacyltransferase FemB K11695 femB; peptidoglycan pentaglycine glycine transferase (the fourth and fifth glycine) [EC:2.3.2.18]
D AYP1020_1011 pbpF; Penicillin-binding protein F K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D AYP1020_1152 mgt; Monofunctional glycosyltransferase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
D AYP1020_0489 pbpB; Penicillin-binding protein B K12552 pbpA; penicillin-binding protein 1 [EC:3.4.-.-]
D AYP1020_0850 pbpH; Penicillin-binding protein H K12553 pbp3; penicillin-binding protein 3 [EC:3.4.-.-]
C 00552 Teichoic acid biosynthesis [PATH:scap00552]
D AYP1020_0051 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AYP1020_0734 phosphatidylglycerophosphatase B K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AYP1020_0112 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AYP1020_0003 tagA; Putative N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D AYP1020_0008 tagB; Putative CDP-glycerol:glycerophosphate glycerophosphotransferase K21285 tagB; teichoic acid glycerol-phosphate primase [EC:2.7.8.44]
D AYP1020_1552 tagF_2; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D AYP1020_2313 tagE_3; putative poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D AYP1020_2024 gtf1_2; Glycosyltransferase Gtf1 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D AYP1020_2194 tagE_2; putative poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D AYP1020_0202 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AYP1020_0204 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYP1020_0203 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D AYP1020_0205 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D AYP1020_0669 msrR; Regulatory protein MsrR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D AYP1020_0377 ywtF; Putative transcriptional regulator YwtF K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D AYP1020_1487 lytR; Membrane-bound protein LytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D AYP1020_1653 epsJ; putative glycosyltransferase EpsJ K22708 tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355]
D AYP1020_0274 ugtP; Processive diacylglycerol glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D AYP1020_0087 ltaS; Lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D AYP1020_0072 csbB; Putative glycosyltransferase CsbB K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-]
D AYP1020_0553 putative membrane protein K25619 yfhO; lipoteichoic acid glycosylation protein
D AYP1020_0552 putative membrane protein K25619 yfhO; lipoteichoic acid glycosylation protein
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:scap00543]
D AYP1020_0112 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AYP1020_1907 icaA; Poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D AYP1020_1908 icaD; Intercellular adhesion protein D K21461 icaD; poly-beta-1,6-N-acetyl-D-glucosamine synthesis protein
D AYP1020_2277 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:scap00730]
D AYP1020_1280 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D AYP1020_1668 moeB_2; Molybdopterin-synthase adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D AYP1020_0915 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYP1020_0996 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYP1020_0995 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AYP1020_1665 thiO; Glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D AYP1020_1667 thiG; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D AYP1020_1664 tenI; Regulatory protein TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D AYP1020_1279 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D AYP1020_1278 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D AYP1020_0528 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AYP1020_1820 phoA; Alkaline phosphatase 4 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AYP1020_0530 thiN; Thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D AYP1020_1404 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AYP1020_1281 tenA; Putative thiaminase-2 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D AYP1020_1649 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase K20895 ylmB; formylaminopyrimidine deformylase [EC:3.5.1.-]
C 00740 Riboflavin metabolism [PATH:scap00740]
D AYP1020_1047 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AYP1020_1049 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AYP1020_0241 yidA_1; Sugar phosphatase YidA K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D AYP1020_1046 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D AYP1020_1048 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D AYP1020_0581 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D AYP1020_2149 nfrA; NADPH-dependent oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D AYP1020_1279 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D AYP1020_0801 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:scap00750]
D AYP1020_2329 pdxK; Pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D AYP1020_0637 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D AYP1020_2267 pdxS; Pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D AYP1020_2268 pdxT; Glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:scap00760]
D AYP1020_1190 pncB2; Nicotinate phosphoribosyltransferase pncB2 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D AYP1020_1328 deoD; Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AYP1020_2303 yfkN_4; Trifunctional nucleotide phosphoesterase protein YfkN precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AYP1020_0891 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D AYP1020_1189 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D AYP1020_1391 cobB; NAD-dependent protein deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D AYP1020_0265 ppnK; putative inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:scap00770]
D AYP1020_1768 alsS; Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AYP1020_1242 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AYP1020_1243 acetolactate synthase 1 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AYP1020_1244 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AYP1020_1241 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AYP1020_1765 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D AYP1020_1623 panE_1; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D AYP1020_1766 panE_2; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D AYP1020_1764 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AYP1020_1317 coaW; Type II pantothenate kinase K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33]
D AYP1020_0518 coaBC; DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D AYP1020_0448 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D AYP1020_0970 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D AYP1020_1264 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D AYP1020_1944 psf-1; 4'-phosphopantetheinyl transferase psf-1 K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D AYP1020_2305 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AYP1020_1763 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:scap00780]
D AYP1020_0248 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AYP1020_0540 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYP1020_2307 fabG_3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYP1020_0589 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYP1020_1285 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AYP1020_0269 fabI; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AYP1020_1953 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D AYP1020_0766 birA; Bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:scap00785]
D AYP1020_0831 lipM; Octanoyltransferase LipM K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D AYP1020_0195 lipA_1; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D AYP1020_2339 lipL; Octanoyl-[GcvH]:protein N-octanoyltransferase K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D AYP1020_0284 lplJ; Lipoate-protein ligase LplJ K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D AYP1020_0420 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0817 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0417 pdhA; Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D AYP1020_0418 pdhB; Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D AYP1020_0419 pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AYP1020_0724 odhA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AYP1020_0723 odhB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AYP1020_0816 bfmBAA; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D AYP1020_0815 bfmBAB; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D AYP1020_0814 pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D AYP1020_0834 gcvPA; putative glycine dehydrogenase [decarboxylating] subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D AYP1020_0833 gcvPB; putative glycine dehydrogenase [decarboxylating] subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D AYP1020_0835 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AYP1020_0176 gcvH; Octanoyl/lipoyl carrier protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:scap00790]
D AYP1020_2315 folE2; GTP cyclohydrolase folE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D AYP1020_1820 phoA; Alkaline phosphatase 4 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AYP1020_2247 folB; Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D AYP1020_2248 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D AYP1020_2246 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D AYP1020_0743 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AYP1020_0946 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D AYP1020_1047 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AYP1020_0081 trpG_1; Anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D AYP1020_0082 pabB; Para-aminobenzoate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D AYP1020_0083 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D AYP1020_0079 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AYP1020_0078 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D AYP1020_0080 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AYP1020_0097 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AYP1020_1443 moaA; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AYP1020_1449 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AYP1020_1446 moaE; Molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AYP1020_1450 moaB; Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AYP1020_1448 moeA; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D AYP1020_1444 mobA; putative molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:scap00670]
D AYP1020_0743 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AYP1020_1012 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D AYP1020_0387 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AYP1020_1299 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AYP1020_0396 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AYP1020_0397 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AYP1020_0522 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AYP1020_0835 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AYP1020_2114 yitJ; Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D AYP1020_0744 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AYP1020_0848 putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:scap00860]
D AYP1020_0955 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D AYP1020_1142 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase 2 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AYP1020_0950 hemL1; Glutamate-1-semialdehyde 2,1-aminomutase 1 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AYP1020_0951 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AYP1020_0953 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D AYP1020_0952 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D AYP1020_1080 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D AYP1020_1078 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D AYP1020_1079 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D AYP1020_2337 putative heme peroxidase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D AYP1020_1805 sumT_2; Uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AYP1020_1586 sumT_1; Uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AYP1020_1804 sirC; Precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D AYP1020_0440 ctaB2; Protoheme IX farnesyltransferase 2 K02257 COX10; heme o synthase [EC:2.5.1.141]
D AYP1020_0439 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D AYP1020_0461 isdG; Heme-degrading monooxygenase 1 K07145 isdG; heme oxygenase (staphylobilin-producing) [EC:1.14.99.48]
D AYP1020_1366 isdI; Heme-degrading monooxygenase 2 K07145 isdG; heme oxygenase (staphylobilin-producing) [EC:1.14.99.48]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:scap00130]
D AYP1020_0779 ubiE; Demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D AYP1020_0366 dhbC; Isochorismate synthase DhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D AYP1020_0367 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D AYP1020_0368 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D AYP1020_1067 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D AYP1020_1068 menE; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D AYP1020_0369 menB; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D AYP1020_0214 ydiI; Esterase YdiI K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D AYP1020_0365 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D AYP1020_1954 azoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AYP1020_1322 qorB; Quinone oxidoreductase 2 K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:scap00900]
D AYP1020_2227 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D AYP1020_2109 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_2323 yhfS; Putative acetyl-CoA C-acetyltransferase YhfS K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_1715 pksG; Polyketide biosynthesis 3-hydroxy-3-methylglutaryl-ACP synthase PksG K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D AYP1020_1714 mvaA; 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D AYP1020_2340 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D AYP1020_2342 mevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D AYP1020_2341 homoserine kinase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D AYP1020_1530 fni; Isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D AYP1020_0820 Farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D AYP1020_0780 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D AYP1020_0778 hepT; Heptaprenyl diphosphate synthase component 2 K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D AYP1020_0569 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:scap00906]
D AYP1020_1733 crtM; Dehydrosqualene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
D AYP1020_1732 crtN; Dehydrosqualene desaturase K10209 crtN; 4,4'-diapophytoene desaturase [EC:1.3.8.2]
D AYP1020_1735 crtP; Diapolycopene oxygenase K10210 crtP; diapolycopene oxygenase [EC:1.14.99.44]
D AYP1020_1196 alkH; Aldehyde dehydrogenase K25072 crtNc; 4,4'-diapolycopenoate synthase [EC:1.2.99.10]
D AYP1020_1734 crtQ; 4,4'-diaponeurosporenoate glycosyltransferase K10211 crtQ; 4,4'-diaponeurosporenoate glycosyltransferase [EC:2.4.1.-]
D AYP1020_1736 hypothetical protein K10212 K10212; glycosyl-4,4'-diaponeurosporenoate acyltransferase [EC:2.3.1.-]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:scap00903]
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_2095 lipR_3; Putative acetyl-hydrolase LipR precursor K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D AYP1020_0650 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D AYP1020_0366 dhbC; Isochorismate synthase DhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D AYP1020_2330 Penicillin acylase precursor K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:scap00261]
D AYP1020_1802 sat; Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D AYP1020_0635 yclM; Aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYP1020_0701 lysC; Aspartokinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYP1020_0702 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AYP1020_0703 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AYP1020_0704 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:scap00521]
D AYP1020_0845 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYP1020_0378 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYP1020_0431 suhB_1; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AYP1020_1488 suhB_2; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D AYP1020_0845 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:scap00401]
D AYP1020_0672 tyrC; Arogenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AYP1020_0093 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D AYP1020_0674 trpE_1; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AYP1020_0676 trpG_2; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D AYP1020_0539 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AYP1020_0540 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYP1020_2307 fabG_3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYP1020_0589 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYP1020_0269 fabI; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D AYP1020_0541 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:scap00999]
D AYP1020_1062 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AYP1020_0893 aroE; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites [PATH:scap00997]
D AYP1020_1371 alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
D AYP1020_1374 iucC; Aerobactin synthase K23446 sfnaD; D-ornithine---citrate ligase [EC:6.3.2.58]
D AYP1020_1372 iucA; N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase K23447 sfnaB; staphyloferrin A synthase [EC:6.3.2.57]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:scap00362]
D AYP1020_1676 catE_2; Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D AYP1020_0502 catE_1; Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D AYP1020_2148 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D AYP1020_0670 putative tautomerase.1 K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D AYP1020_2109 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_2323 yhfS; Putative acetyl-CoA C-acetyltransferase YhfS K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D AYP1020_0711 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:scap00625]
D AYP1020_1677 aldA_2; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AYP1020_1309 Putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D AYP1020_1676 catE_2; Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D AYP1020_0502 catE_1; Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:scap00622]
D AYP1020_1676 catE_2; Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D AYP1020_0502 catE_1; Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D AYP1020_0670 putative tautomerase.1 K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D AYP1020_2148 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D AYP1020_1676 catE_2; Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D AYP1020_0502 catE_1; Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
D AYP1020_1464 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D AYP1020_1463 ureB; Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D AYP1020_1462 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
D AYP1020_2095 lipR_3; Putative acetyl-hydrolase LipR precursor K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:scap00621]
D AYP1020_0670 putative tautomerase.1 K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D AYP1020_2148 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:scap03020]
D AYP1020_2290 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AYP1020_2291 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AYP1020_1399 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AYP1020_0517 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AYP1020_1315 rpoE; RNAP delta factor K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:scap03010]
D AYP1020_0784 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AYP1020_0565 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AYP1020_1419 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AYP1020_0999 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AYP1020_1408 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AYP1020_2130 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AYP1020_2294 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AYP1020_1411 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AYP1020_1392 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AYP1020_1426 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AYP1020_1400 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AYP1020_2293 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AYP1020_1401 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AYP1020_0644 rpsN2; Alternate 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AYP1020_1412 rpsN1; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AYP1020_0582 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AYP1020_0547 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AYP1020_1416 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AYP1020_2132 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AYP1020_1421 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AYP1020_0883 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AYP1020_0873 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AYP1020_2286 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AYP1020_1422 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AYP1020_1425 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AYP1020_1424 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AYP1020_1413 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AYP1020_1410 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AYP1020_2288 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AYP1020_2049 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AYP1020_2287 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AYP1020_2285 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AYP1020_1393 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AYP1020_1415 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AYP1020_1406 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AYP1020_1418 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AYP1020_1398 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AYP1020_1409 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AYP1020_0550 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AYP1020_0961 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AYP1020_0938 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AYP1020_1420 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AYP1020_1423 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AYP1020_1414 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AYP1020_2233 rplY; General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25
D AYP1020_0936 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AYP1020_0531 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AYP1020_1417 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AYP1020_1407 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AYP1020_1307 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D AYP1020_0451 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AYP1020_0849 rpmG2_2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D AYP1020_0643 rpmG2_1; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D AYP1020_2064 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AYP1020_0962 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AYP1020_1402 rpmJ; Ribosomal protein II K02919 RP-L36; large subunit ribosomal protein L36
D AYP1020_2292 rplGB; Ribosome-associated protein L7Ae-like protein K07590 RP-L7A; large subunit ribosomal protein L7A
D AYP1020_2209 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_1357 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_1252 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_2259 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_1138 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_2262 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_1135 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_1251 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_1356 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_2210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_2264 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_2260 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_1355 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_1134 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_2265 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_2261 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_2250 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_1250 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_2211 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:scap00970]
D AYP1020_1125 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AYP1020_2258 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AYP1020_1136 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AYP1020_0134 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYP1020_0478 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYP1020_1127 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYP1020_2256 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYP1020_0287 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AYP1020_1354 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AYP1020_1071 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AYP1020_2045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYP1020_1118 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYP1020_1075 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYP1020_1121 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYP1020_1111 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AYP1020_1350 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AYP1020_1112 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AYP1020_1070 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AYP1020_2046 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AYP1020_1353 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AYP1020_1129 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_2254 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1072 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1253 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1107 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1109 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1108 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1073 tRNA-His K14226 tRNA-His; tRNA His
D AYP1020_1113 tRNA-His K14226 tRNA-His; tRNA His
D AYP1020_1137 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AYP1020_2263 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AYP1020_1254 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYP1020_1130 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYP1020_1128 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYP1020_2255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYP1020_1106 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYP1020_1131 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AYP1020_1349 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AYP1020_2253 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AYP1020_1076 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYP1020_1119 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYP1020_1123 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYP1020_1124 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYP1020_1074 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AYP1020_1117 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AYP1020_1126 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AYP1020_2257 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AYP1020_1120 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYP1020_2204 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYP1020_1122 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYP1020_0288 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYP1020_1069 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYP1020_1116 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYP1020_2252 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYP1020_1132 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYP1020_1904 tRNA-OTHER K14234 tRNA-Thr; tRNA Thr
D AYP1020_1114 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AYP1020_1115 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AYP1020_1351 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AYP1020_1133 tRNA-Val K14237 tRNA-Val; tRNA Val
D AYP1020_2251 tRNA-Val K14237 tRNA-Val; tRNA Val
D AYP1020_1352 tRNA-Val K14237 tRNA-Val; tRNA Val
D AYP1020_2276 gltX; Glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D AYP1020_1178 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AYP1020_1177 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AYP1020_1179 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AYP1020_0911 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AYP1020_0921 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AYP1020_0764 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AYP1020_0863 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D AYP1020_0965 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AYP1020_2055 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AYP1020_2278 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AYP1020_2222 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AYP1020_0522 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AYP1020_0947 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AYP1020_1039 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AYP1020_0501 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AYP1020_2249 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AYP1020_2359 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AYP1020_0572 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AYP1020_0922 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AYP1020_0463 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AYP1020_0464 pheT_1; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AYP1020_1010 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AYP1020_0255 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:scap03060]
D AYP1020_1891 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AYP1020_1405 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AYP1020_2283 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AYP1020_0147 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AYP1020_0928 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D AYP1020_0929 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AYP1020_1620 yidC_2; Membrane protein YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYP1020_1277 yidC_1; Membrane protein YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYP1020_1887 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AYP1020_0119 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AYP1020_0546 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AYP1020_0544 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D AYP1020_2008 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D AYP1020_1554 tatAy; Sec-independent protein translocase protein TatAy K03116 tatA; sec-independent protein translocase protein TatA
D AYP1020_1555 tatC2; Sec-independent protein translocase protein TatCy K03118 tatC; sec-independent protein translocase protein TatC
D AYP1020_0234 spsB_1; Signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AYP1020_0235 spsB_2; Signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AYP1020_2093 spsB_3; Signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AYP1020_0503 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:scap04122]
D AYP1020_0915 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYP1020_0996 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYP1020_0914 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AYP1020_1446 moaE; Molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AYP1020_1443 moaA; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AYP1020_1445 moaD; Sulfur carrier protein MoaD K03636 moaD; sulfur-carrier protein
D AYP1020_1451 moeB_1; Molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D AYP1020_1449 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AYP1020_1450 moaB; Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AYP1020_0995 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AYP1020_1666 thiS; Thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D AYP1020_1668 moeB_2; Molybdopterin-synthase adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:scap03018]
D AYP1020_0145 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYP1020_0583 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AYP1020_0149 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AYP1020_1268 putative DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AYP1020_0090 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYP1020_1986 recQ_3; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYP1020_0789 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYP1020_1308 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AYP1020_0595 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D AYP1020_0413 Ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AYP1020_0584 Ribonuclease J 2 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AYP1020_0979 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AYP1020_0878 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D AYP1020_1216 groL; Stress protein H5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AYP1020_0613 hfq; Host factor-I protein K03666 hfq; host factor-I protein
D AYP1020_1648 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:scap03030]
D AYP1020_1172 polC_2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AYP1020_0983 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AYP1020_0573 polC_1; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D AYP1020_2206 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AYP1020_2216 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AYP1020_0884 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AYP1020_2062 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AYP1020_2048 dnaC_2; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AYP1020_0860 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AYP1020_0308 ssb_1; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D AYP1020_2131 ssb_2; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D AYP1020_1283 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D AYP1020_0749 rnhA; 14.7 kDa ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AYP1020_0555 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AYP1020_0465 rnhC; Ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D AYP1020_0972 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AYP1020_1182 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:scap03410]
D AYP1020_0762 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AYP1020_2331 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AYP1020_1146 yfhQ; putative A/G-specific adenine glycosylase YfhQ K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AYP1020_1525 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D AYP1020_0971 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AYP1020_0948 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AYP1020_0855 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D AYP1020_0972 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AYP1020_0927 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AYP1020_1182 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:scap03420]
D AYP1020_2235 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AYP1020_0125 uvrA_1; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D AYP1020_0124 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D AYP1020_0471 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D AYP1020_1183 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AYP1020_0972 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AYP1020_1182 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:scap03430]
D AYP1020_0605 mutS_1; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D AYP1020_0469 mutS2; MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2
D AYP1020_0606 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D AYP1020_1183 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AYP1020_0822 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AYP1020_0821 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AYP1020_0927 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AYP1020_0308 ssb_1; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D AYP1020_2131 ssb_2; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D AYP1020_1283 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D AYP1020_0983 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AYP1020_0573 polC_1; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D AYP1020_2062 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AYP1020_2206 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AYP1020_0884 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AYP1020_2216 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AYP1020_1172 polC_2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AYP1020_1182 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:scap03440]
D AYP1020_0927 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AYP1020_0308 ssb_1; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D AYP1020_2131 ssb_2; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D AYP1020_1283 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D AYP1020_2060 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D AYP1020_0864 recO; Recombination protein O K03584 recO; DNA repair protein RecO (recombination protein O)
D AYP1020_2208 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D AYP1020_0594 recA; Recombinase A K03553 recA; recombination protein RecA
D AYP1020_0972 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AYP1020_0933 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AYP1020_0932 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AYP1020_0536 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AYP1020_0912 recD; Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D AYP1020_0983 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AYP1020_0573 polC_1; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D AYP1020_2062 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AYP1020_2206 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AYP1020_0884 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AYP1020_2216 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AYP1020_1172 polC_2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AYP1020_0519 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:scap02010]
D AYP1020_1454 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D AYP1020_1453 modB; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D AYP1020_1452 cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AYP1020_1868 futA1; Iron uptake protein A1 precursor K02012 afuA; iron(III) transport system substrate-binding protein
D AYP1020_1867 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein
D AYP1020_1869 potA_2; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AYP1020_0426 potD; Spermidine/putrescine-binding periplasmic protein precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AYP1020_0425 ydcV; Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein
D AYP1020_0424 potB; Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D AYP1020_0423 potA_1; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D AYP1020_1874 gbuC; Glycine betaine/carnitine transport binding protein GbuC precursor K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AYP1020_1628 opuCC_1; Osmoprotectant-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D AYP1020_0092 opuCB_1; Glycine betaine/carnitine/choline transport system permease protein OpuCB K05845 opuC; osmoprotectant transport system substrate-binding protein
D AYP1020_1966 opuCC_2; Carnitine transport binding protein OpuCC precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D AYP1020_1627 opuCD_1; Glycine betaine/carnitine/choline transport system permease protein OpuCD K05846 opuBD; osmoprotectant transport system permease protein
D AYP1020_1629 opuCB_2; Carnitine transport permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D AYP1020_1965 opuCD_2; Glycine betaine/carnitine/choline transport system permease protein OpuCD K05846 opuBD; osmoprotectant transport system permease protein
D AYP1020_1630 opuCA_2; Carnitine transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AYP1020_0091 opuCA_1; Carnitine transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AYP1020_0733 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AYP1020_0731 lipO; Lipoprotein LplA K17318 lplA; putative aldouronate transport system substrate-binding protein
D AYP1020_0732 yteP; putative multiple-sugar transport system permease YteP K17319 lplB; putative aldouronate transport system permease protein
D AYP1020_0730 araQ; L-arabinose transport system permease protein AraQ K17320 lplC; putative aldouronate transport system permease protein
D AYP1020_1690 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D AYP1020_0698 pstS; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D AYP1020_0697 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D AYP1020_0696 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D AYP1020_0695 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AYP1020_1898 phnD; Phosphate-import protein PhnD precursor K02044 phnD; phosphonate transport system substrate-binding protein
D AYP1020_1895 phnE_1; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AYP1020_1896 phnE_2; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AYP1020_1897 glnQ_2; Glutamine transport ATP-binding protein GlnQ K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AYP1020_1602 putative amino-acid ABC transporter-binding protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D AYP1020_1601 tcyB; L-cystine transport system permease protein TcyB K10009 tcyB; L-cystine transport system permease protein
D AYP1020_1600 tcyC; L-cystine import ATP-binding protein TcyC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D AYP1020_1104 artQ; Arginine transport system permease protein ArtQ K17077 artQ; arginine/lysine/histidine transport system permease protein
D AYP1020_1103 glnQ_1; Glutamine transport ATP-binding protein GlnQ K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D AYP1020_0181 metQ_1; Methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D AYP1020_2187 metQ_2; 28 kDa outer membrane protein K02073 metQ; D-methionine transport system substrate-binding protein
D AYP1020_0180 metP_1; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D AYP1020_2186 metP_2; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D AYP1020_0179 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D AYP1020_2185 metN; Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D AYP1020_0254 dppE; Dipeptide-binding protein DppE precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D AYP1020_0250 oppB; Stage 0 sporulation protein KB K15581 oppB; oligopeptide transport system permease protein
D AYP1020_0251 oppC; Stage 0 sporulation protein KC K15582 oppC; oligopeptide transport system permease protein
D AYP1020_0252 oppD; Stage 0 sporulation protein KD K15583 oppD; oligopeptide transport system ATP-binding protein
D AYP1020_0253 oppF; Stage 0 sporulation protein KE K10823 oppF; oligopeptide transport system ATP-binding protein
D AYP1020_1370 yfmC_1; Ferric-citrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D AYP1020_1829 yfmC_2; Ferric-citrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D AYP1020_1368 fecD; Iron(III) dicitrate transport system permease protein FecD K23182 fecD; ferric citrate transport system permease protein
D AYP1020_1369 yfiZ; putative siderophore transport system permease protein YfiZ precursor K23183 fecC; ferric citrate transport system permease protein
D AYP1020_2385 psaA; Pneumococcal surface adhesin A K19975 mntC; manganese transport system substrate-binding protein
D AYP1020_2386 mntB; Manganese transport system membrane protein MntB K19976 mntB; manganese transport system permease protein
D AYP1020_2387 adcC_2; putative zinc transport system ATP-binding protein AdcC K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D AYP1020_1674 adcA_2; putative zinc transport system zinc-binding lipoprotein AdcA precursor K09815 znuA; zinc transport system substrate-binding protein
D AYP1020_1595 adcA_1; putative zinc transport system zinc-binding lipoprotein AdcA precursor K09815 znuA; zinc transport system substrate-binding protein
D AYP1020_0853 adcB; putative zinc transport system permease protein AdcB K09816 znuB; zinc transport system permease protein
D AYP1020_0854 adcC_1; putative zinc transport system ATP-binding protein AdcC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D AYP1020_1457 bioY; Biotin ECF transporter S component BioY K03523 bioY; biotin transport system substrate-specific component
D AYP1020_0399 ykoC; Putative HMP/thiamine permease protein YkoC K16785 ecfT; energy-coupling factor transport system permease protein
D AYP1020_1395 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D AYP1020_1397 ecfA1; Energy-coupling factor transporter ATP-binding protein EcfA1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D AYP1020_1396 ecfA2_2; Energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D AYP1020_0007 tagG; Teichoic acid translocation permease protein TagG K09692 tagG; teichoic acid transport system permease protein
D AYP1020_1148 hypothetical protein K09692 tagG; teichoic acid transport system permease protein
D AYP1020_0006 tagH_1; Teichoic acids export ATP-binding protein TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D AYP1020_1149 tagH_2; Teichoic acids export ATP-binding protein TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D AYP1020_1544 acidobacterial duplicated orphan permease K09813 hrtB; hemin transport system permease protein
D AYP1020_1543 hrtA; Putative hemin import ATP-binding protein HrtA K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D AYP1020_2085 bceB_2; Bacitracin export permease protein BceB K11632 bceB; bacitracin transport system permease protein
D AYP1020_2086 bceA_3; Bacitracin export ATP-binding protein BceA K11631 bceA; bacitracin transport system ATP-binding protein
D AYP1020_1815 yxdM; ABC transporter permease protein YxdM K19084 braE; bacitracin transport system permease protein
D AYP1020_1816 yxdL; ABC transporter ATP-binding protein YxdL K19083 braD; bacitracin transport system ATP-binding protein
D AYP1020_0028 bceB_1; Bacitracin export permease protein BceB K19080 vraG; cationic antimicrobial peptide transport system permease protein
D AYP1020_0027 bceA_1; Bacitracin export ATP-binding protein BceA K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D AYP1020_0011 bmrA; Multidrug resistance ABC transporter ATP-binding/permease protein BmrA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D AYP1020_0053 irtB; Iron import ATP-binding/permease protein IrtB K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AYP1020_0052 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:scap02060]
D AYP1020_0407 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AYP1020_0406 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D AYP1020_1707 glcB; PTS system glucoside-specific EIICBA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D AYP1020_0739 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AYP1020_1005 ptsG; EIICBA-Glc K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D AYP1020_1568 sacX; PTS system sac EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AYP1020_1494 PTS system EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AYP1020_1503 malP; PTS system maltose-specific EIICB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D AYP1020_1859 manP; EIIBCA-Man K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D AYP1020_1343 mtlF; Mannitol-specific phosphotransferase enzyme IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D AYP1020_1341 mtlA; EIICB-Mtl K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D AYP1020_1385 lacF; Lactose-specific phosphotransferase enzyme IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D AYP1020_1384 lacE; EIICB-Lac K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D AYP1020_0068 fruA; EIIABC-Fru K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D AYP1020_0067 lacC_1; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:scap03070]
D AYP1020_0928 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D AYP1020_2283 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AYP1020_0147 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AYP1020_1891 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AYP1020_1405 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AYP1020_0929 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AYP1020_1620 yidC_2; Membrane protein YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYP1020_1277 yidC_1; Membrane protein YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYP1020_1887 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AYP1020_0119 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AYP1020_0544 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D AYP1020_0546 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AYP1020_1554 tatAy; Sec-independent protein translocase protein TatAy K03116 tatA; sec-independent protein translocase protein TatA
D AYP1020_1555 tatC2; Sec-independent protein translocase protein TatCy K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:scap02020]
D AYP1020_0973 phoR; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AYP1020_0974 phoP; Alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D AYP1020_1820 phoA; Alkaline phosphatase 4 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AYP1020_0698 pstS; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D AYP1020_1007 htrA; Serine protease Do-like HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D AYP1020_0279 Serine protease HtrA-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D AYP1020_1972 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AYP1020_1973 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AYP1020_1971 kdpA; Potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D AYP1020_1970 kdpB; Potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D AYP1020_1969 kdpC; Potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D AYP1020_0793 srrB; Sensor protein SrrB K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D AYP1020_0794 srrA; respiratory response protein A K07775 resD; two-component system, OmpR family, response regulator ResD
D AYP1020_0439 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D AYP1020_2043 walK; Sensor protein kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D AYP1020_2044 walR; Transcriptional regulatory protein WalR K07668 vicR; two-component system, OmpR family, response regulator VicR
D AYP1020_2063 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AYP1020_0073 saeS; Histidine protein kinase SaeS K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D AYP1020_0074 saeR; exoprotein expression protein R K10682 saeR; two-component system, OmpR family, response regulator SaeR
D AYP1020_2086 bceA_3; Bacitracin export ATP-binding protein BceA K11631 bceA; bacitracin transport system ATP-binding protein
D AYP1020_2085 bceB_2; Bacitracin export permease protein BceB K11632 bceB; bacitracin transport system permease protein
D AYP1020_1815 yxdM; ABC transporter permease protein YxdM K19084 braE; bacitracin transport system permease protein
D AYP1020_1816 yxdL; ABC transporter ATP-binding protein YxdL K19083 braD; bacitracin transport system ATP-binding protein
D AYP1020_1817 graS_2; Sensor histidine kinase GraS K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D AYP1020_1818 graR_2; Glycopeptide resistance-associated protein R K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D AYP1020_0028 bceB_1; Bacitracin export permease protein BceB K19080 vraG; cationic antimicrobial peptide transport system permease protein
D AYP1020_0027 bceA_1; Bacitracin export ATP-binding protein BceA K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D AYP1020_0026 graS_1; Sensor histidine kinase GraS K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D AYP1020_0025 graR_1; Glycopeptide resistance-associated protein R K19078 graR; two-component system, OmpR family, response regulator protein GraR
D AYP1020_0202 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AYP1020_0203 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D AYP1020_0204 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYP1020_0205 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D AYP1020_0667 mprF; Phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D AYP1020_0725 arlS; Signal transduction histidine-protein kinase ArlS K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D AYP1020_0726 arlR; Response regulator ArlR K18941 arlR; two-component system, OmpR family, response regulator ArlR
D AYP1020_0360 thiopeptide-type bacteriocin biosynthesis domain protein K20483 nisB; lantibiotic biosynthesis protein
D AYP1020_0361 nisC; Nisin biosynthesis protein NisC K20484 nisC; lantibiotic biosynthesis protein
D AYP1020_0223 kapB; Kinase-associated lipoprotein B precursor K06347 kapB; kinase-associated protein B
D AYP1020_0982 maeB; NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D AYP1020_2096 cimH; Citrate/malate-proton symporter K11616 maeN; malate:Na+ symporter
D AYP1020_1625 lrgA; Antiholin-like protein LrgA K05338 lrgA; holin-like protein
D AYP1020_1626 lrgB; Antiholin-like protein LrgB K05339 lrgB; holin-like protein LrgB
D AYP1020_1223 agrB; Accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D AYP1020_1224 Accessory gene regulator protein D K07800 agrD; AgrD protein
D AYP1020_1225 agrC; Accessory gene regulator protein C K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D AYP1020_1226 agrA; Accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D AYP1020_1585 narG; Respiratory nitrate reductase 1 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D AYP1020_1584 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D AYP1020_1582 narX; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D AYP1020_1583 nitrate reductase 2 subunit delta K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D AYP1020_0628 desK; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D AYP1020_0629 narL; putative transcriptional regulatory protein NarL K07693 desR; two-component system, NarL family, response regulator DesR
D AYP1020_1163 vraS; Sensor protein VraS K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3]
D AYP1020_1162 vraR_2; Response regulator protein VraR K07694 vraR; two-component system, NarL family, vancomycin resistance associated response regulator VraR
D AYP1020_1164 putative membrane protein K11622 liaF; lia operon protein LiaF
D AYP1020_1580 nreB; Oxygen sensor histidine kinase NreB K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D AYP1020_1579 nreC; Nitrogen regulation protein C K07696 nreC; two-component system, NarL family, response regulator NreC
D AYP1020_1581 hypothetical protein K10851 nreA; nitrogen regulatory protein A
D AYP1020_1578 narT; putative nitrate transporter NarT K10850 narT; MFS transporter, NNP family, putative nitrate transporter
D AYP1020_0618 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AYP1020_2109 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_2323 yhfS; Putative acetyl-CoA C-acetyltransferase YhfS K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_0409 ythA; Putative cytochrome bd menaquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AYP1020_0410 ythB; Putative cytochrome bd menaquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AYP1020_1159 ptpA; Low molecular weight protein-tyrosine-phosphatase PtpA K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D AYP1020_1297 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AYP1020_2100 Endoglucanase E1 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D AYP1020_1348 arg; Arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:scap02024]
D AYP1020_1321 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D AYP1020_0613 hfq; Host factor-I protein K03666 hfq; host factor-I protein
D AYP1020_0674 trpE_1; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AYP1020_0676 trpG_2; Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AYP1020_1973 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AYP1020_2322 yhfT; putative acyl--CoA ligase YhfT K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AYP1020_1049 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AYP1020_2373 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D AYP1020_1224 Accessory gene regulator protein D K07800 agrD; AgrD protein
D AYP1020_1223 agrB; Accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D AYP1020_1225 agrC; Accessory gene regulator protein C K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D AYP1020_1226 agrA; Accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D AYP1020_1222 hld; delta hemolysin K11039 hld; delta-hemolysin
D AYP1020_0480 phenol soluble modulin beta like K20337 psmB; phenol-soluble modulin beta
D AYP1020_0482 phenol soluble modulin beta like K20337 psmB; phenol-soluble modulin beta
D AYP1020_0479 phenol soluble modulin beta like K20337 psmB; phenol-soluble modulin beta
D AYP1020_0481 phenol soluble modulin beta like K20337 psmB; phenol-soluble modulin beta
D AYP1020_1043 rot; Repressor of toxins K20338 rot; MarR family transcriptional regulator, global regulator for virulence
D AYP1020_0254 dppE; Dipeptide-binding protein DppE precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D AYP1020_0250 oppB; Stage 0 sporulation protein KB K15581 oppB; oligopeptide transport system permease protein
D AYP1020_0251 oppC; Stage 0 sporulation protein KC K15582 oppC; oligopeptide transport system permease protein
D AYP1020_0252 oppD; Stage 0 sporulation protein KD K15583 oppD; oligopeptide transport system ATP-binding protein
D AYP1020_0253 oppF; Stage 0 sporulation protein KE K10823 oppF; oligopeptide transport system ATP-binding protein
D AYP1020_1590 gsiB; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AYP1020_0691 gsiC; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AYP1020_0690 dppC; Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AYP1020_0688 gsiA; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AYP1020_0686 ddpF; putative D,D-dipeptide transport ATP-binding protein DdpF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AYP1020_1386 lacD; Tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D AYP1020_1620 yidC_2; Membrane protein YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYP1020_1277 yidC_1; Membrane protein YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYP1020_2166 splF; Serine protease SplF precursor K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D AYP1020_0286 comK; Competence protein K K02250 comK; competence protein ComK
D AYP1020_0928 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D AYP1020_2283 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AYP1020_0147 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AYP1020_1891 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AYP1020_1405 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AYP1020_0929 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AYP1020_1887 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AYP1020_0119 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AYP1020_0544 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D AYP1020_0546 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AYP1020_1985 hlb; beta hemolysin K01114 plc; phospholipase C [EC:3.1.4.3]
D AYP1020_0360 thiopeptide-type bacteriocin biosynthesis domain protein K20483 nisB; lantibiotic biosynthesis protein
D AYP1020_0361 nisC; Nisin biosynthesis protein NisC K20484 nisC; lantibiotic biosynthesis protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:scap02040]
D AYP1020_1602 putative amino-acid ABC transporter-binding protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D AYP1020_0859 rpoD_1; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D AYP1020_1987 rpoD_2; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D AYP1020_0145 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:scap01501]
D AYP1020_0254 dppE; Dipeptide-binding protein DppE precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D AYP1020_0250 oppB; Stage 0 sporulation protein KB K15581 oppB; oligopeptide transport system permease protein
D AYP1020_0251 oppC; Stage 0 sporulation protein KC K15582 oppC; oligopeptide transport system permease protein
D AYP1020_0252 oppD; Stage 0 sporulation protein KD K15583 oppD; oligopeptide transport system ATP-binding protein
D AYP1020_0253 oppF; Stage 0 sporulation protein KE K10823 oppF; oligopeptide transport system ATP-binding protein
D AYP1020_0011 bmrA; Multidrug resistance ABC transporter ATP-binding/permease protein BmrA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D AYP1020_0489 pbpB; Penicillin-binding protein B K12552 pbpA; penicillin-binding protein 1 [EC:3.4.-.-]
D AYP1020_0850 pbpH; Penicillin-binding protein H K12553 pbp3; penicillin-binding protein 3 [EC:3.4.-.-]
D AYP1020_0760 ponA; Penicillin-binding protein 1A/1B K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:scap01502]
D AYP1020_1270 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AYP1020_1263 alr1; Alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D AYP1020_0707 alr2; Alanine racemase 2 K01775 alr; alanine racemase [EC:5.1.1.1]
D AYP1020_1269 murF_1; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AYP1020_0490 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AYP1020_0735 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:scap01503]
D AYP1020_0923 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AYP1020_1007 htrA; Serine protease Do-like HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D AYP1020_0279 Serine protease HtrA-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D AYP1020_0026 graS_1; Sensor histidine kinase GraS K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D AYP1020_0025 graR_1; Glycopeptide resistance-associated protein R K19078 graR; two-component system, OmpR family, response regulator protein GraR
D AYP1020_0202 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AYP1020_0203 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D AYP1020_0204 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYP1020_0205 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D AYP1020_0667 mprF; Phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D AYP1020_0027 bceA_1; Bacitracin export ATP-binding protein BceA K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D AYP1020_0028 bceB_1; Bacitracin export permease protein BceB K19080 vraG; cationic antimicrobial peptide transport system permease protein
D AYP1020_1844 sepA; Extracellular elastase precursor K01401 aur; aureolysin [EC:3.4.24.29]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:scap01000]
C 01001 Protein kinases [BR:scap01001]
D AYP1020_0526 prkC; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AYP1020_1258 rsbW; Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D AYP1020_0973 phoR; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AYP1020_1972 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AYP1020_0793 srrB; Sensor protein SrrB K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D AYP1020_2043 walK; Sensor protein kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D AYP1020_0073 saeS; Histidine protein kinase SaeS K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D AYP1020_0026 graS_1; Sensor histidine kinase GraS K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D AYP1020_1817 graS_2; Sensor histidine kinase GraS K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D AYP1020_0725 arlS; Signal transduction histidine-protein kinase ArlS K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D AYP1020_1546 hssS; Heme sensor protein HssS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AYP1020_0628 desK; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D AYP1020_1163 vraS; Sensor protein VraS K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3]
D AYP1020_1580 nreB; Oxygen sensor histidine kinase NreB K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D AYP1020_1095 liaS; Sensor histidine kinase LiaS K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D AYP1020_1225 agrC; Accessory gene regulator protein C K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:scap01009]
D AYP1020_0979 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AYP1020_0525 stp; Serine/threonine phosphatase stp K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:scap01002]
D AYP1020_0503 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AYP1020_1927 pcp; Pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D AYP1020_2157 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AYP1020_0121 sle1_2; N-acetylmuramoyl-L-alanine amidase sle1 precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AYP1020_1799 ssaA_4; secretory antigen SsaA precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AYP1020_1478 ssaA_2; secretory antigen SsaA precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AYP1020_0394 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AYP1020_2202 gltA_2; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AYP1020_1340 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AYP1020_1153 yraA; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124]
D AYP1020_2330 Penicillin acylase precursor K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D AYP1020_1681 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D AYP1020_0460 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D AYP1020_1223 agrB; Accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D AYP1020_1638 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D AYP1020_1706 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D AYP1020_0282 hypothetical protein K07052 K07052; CAAX protease family protein
D AYP1020_1218 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D AYP1020_2037 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D AYP1020_1490 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D AYP1020_p16 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D AYP1020_0259 pepF1_1; Oligoendopeptidase F, plasmid K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D AYP1020_1844 sepA; Extracellular elastase precursor K01401 aur; aureolysin [EC:3.4.24.29]
D AYP1020_0212 pepA_1; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AYP1020_1031 Putative dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AYP1020_1846 dapE; putative succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AYP1020_0811 pepT_2; Peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D AYP1020_0108 pepT_1; Peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D AYP1020_1166 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AYP1020_0988 putative peptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D AYP1020_0828 putative peptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D AYP1020_1157 pepS; Aminopeptidase PepS K19689 ampS; aminopeptidase [EC:3.4.11.-]
D AYP1020_2243 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AYP1020_1025 pepA_3; Glutamyl aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D AYP1020_0673 pepA_2; Glutamyl aminopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D AYP1020_0571 Putative zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D AYP1020_2166 splF; Serine protease SplF precursor K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D AYP1020_1007 htrA; Serine protease Do-like HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D AYP1020_0279 Serine protease HtrA-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D AYP1020_1916 dacA; D-alanyl-D-alanine carboxypeptidase DacA precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AYP1020_0135 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AYP1020_0647 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D AYP1020_0234 spsB_1; Signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AYP1020_0235 spsB_2; Signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AYP1020_2093 spsB_3; Signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AYP1020_0737 putative CtpA-like serine protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D AYP1020_0847 gluP; Rhomboid protease GluP K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D AYP1020_0562 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D AYP1020_1692 capD; Capsule biosynthesis protein CapD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AYP1020_0905 yhbU_1; putative protease YhbU precursor K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D AYP1020_0906 yhbU_2; putative protease YhbU precursor K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:scap01003]
D AYP1020_0274 ugtP; Processive diacylglycerol glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D AYP1020_0760 ponA; Penicillin-binding protein 1A/1B K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AYP1020_1011 pbpF; Penicillin-binding protein F K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D AYP1020_1152 mgt; Monofunctional glycosyltransferase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
D AYP1020_0003 tagA; Putative N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D AYP1020_2313 tagE_3; putative poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D AYP1020_2024 gtf1_2; Glycosyltransferase Gtf1 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D AYP1020_2194 tagE_2; putative poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D AYP1020_0112 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AYP1020_1653 epsJ; putative glycosyltransferase EpsJ K22708 tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355]
D AYP1020_0072 csbB; Putative glycosyltransferase CsbB K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-]
D AYP1020_0553 putative membrane protein K25619 yfhO; lipoteichoic acid glycosylation protein
D AYP1020_0552 putative membrane protein K25619 yfhO; lipoteichoic acid glycosylation protein
D AYP1020_1907 icaA; Poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:scap01005]
D AYP1020_0112 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:scap01011]
D AYP1020_1286 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AYP1020_1311 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AYP1020_0103 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AYP1020_1020 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AYP1020_0491 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AYP1020_0275 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D AYP1020_1270 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AYP1020_1437 femX; Lipid II:glycine glycyltransferase K11693 femX; peptidoglycan pentaglycine glycine transferase (the first glycine) [EC:2.3.2.16]
D AYP1020_0683 femA_1; Aminoacyltransferase FemA K11694 femA; peptidoglycan pentaglycine glycine transferase (the second and third glycine) [EC:2.3.2.17]
D AYP1020_0684 femB; Aminoacyltransferase FemB K11695 femB; peptidoglycan pentaglycine glycine transferase (the fourth and fifth glycine) [EC:2.3.2.18]
D AYP1020_1263 alr1; Alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D AYP1020_0707 alr2; Alanine racemase 2 K01775 alr; alanine racemase [EC:5.1.1.1]
D AYP1020_0475 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AYP1020_0490 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AYP1020_0735 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AYP1020_0051 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AYP1020_0734 phosphatidylglycerophosphatase B K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AYP1020_0760 ponA; Penicillin-binding protein 1A/1B K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AYP1020_0489 pbpB; Penicillin-binding protein B K12552 pbpA; penicillin-binding protein 1 [EC:3.4.-.-]
D AYP1020_0850 pbpH; Penicillin-binding protein H K12553 pbp3; penicillin-binding protein 3 [EC:3.4.-.-]
D AYP1020_1916 dacA; D-alanyl-D-alanine carboxypeptidase DacA precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AYP1020_1011 pbpF; Penicillin-binding protein F K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D AYP1020_1152 mgt; Monofunctional glycosyltransferase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
D AYP1020_0121 sle1_2; N-acetylmuramoyl-L-alanine amidase sle1 precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AYP1020_1799 ssaA_4; secretory antigen SsaA precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AYP1020_1478 ssaA_2; secretory antigen SsaA precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AYP1020_1681 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D AYP1020_0460 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D AYP1020_0923 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:scap01004]
D AYP1020_0539 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AYP1020_0247 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AYP1020_0248 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AYP1020_0540 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYP1020_2307 fabG_3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYP1020_0589 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYP1020_1285 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AYP1020_0269 fabI; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AYP1020_1013 acsA_1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AYP1020_1785 acsA_2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AYP1020_2322 yhfT; putative acyl--CoA ligase YhfT K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AYP1020_0538 plsX; Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AYP1020_0661 plsY; G3P acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AYP1020_1006 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:scap01006]
D AYP1020_0820 Farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D AYP1020_0780 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D AYP1020_0778 hepT; Heptaprenyl diphosphate synthase component 2 K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D AYP1020_0569 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AYP1020_1733 crtM; Dehydrosqualene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
D AYP1020_0612 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AYP1020_0365 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D AYP1020_0440 ctaB2; Protoheme IX farnesyltransferase 2 K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:scap01007]
D AYP1020_2276 gltX; Glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D AYP1020_1010 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AYP1020_0255 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AYP1020_2278 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AYP1020_2359 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AYP1020_2222 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AYP1020_0501 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AYP1020_0947 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AYP1020_1039 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AYP1020_2249 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AYP1020_0921 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AYP1020_0764 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AYP1020_0922 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AYP1020_0863 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D AYP1020_2055 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AYP1020_0572 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AYP1020_0965 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AYP1020_0911 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AYP1020_0463 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AYP1020_0464 pheT_1; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AYP1020_1731 dapL; LL-diaminopimelate aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D AYP1020_0370 patA_1; Putative N-acetyl-LL-diaminopimelate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D AYP1020_0093 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AYP1020_2298 Putative pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D AYP1020_0227 rocD2; Ornithine aminotransferase 2 K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D AYP1020_1773 puuE; 4-aminobutyrate aminotransferase PuuE K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AYP1020_1142 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase 2 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AYP1020_0950 hemL1; Glutamate-1-semialdehyde 2,1-aminomutase 1 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AYP1020_1030 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AYP1020_2305 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:scap00194]
D AYP1020_1288 atpC; F-ATPase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AYP1020_1289 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AYP1020_1290 atpG; F-ATPase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AYP1020_1291 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AYP1020_1292 atpH; F-type ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AYP1020_1293 atpF; F-type ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AYP1020_1294 atpE; Lipid-binding protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AYP1020_1295 atpB; F-ATPase subunit 6 K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AYP1020_1296 ATP synthase I chain K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:scap03000]
D AYP1020_1613 DNA gyrase inhibitor K13653 K13653; AraC family transcriptional regulator
D AYP1020_1870 cysL; CysJI operon transcriptional activator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D AYP1020_1390 lacR; Lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D AYP1020_0066 glpR; Glycerol-3-phosphate regulon repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D AYP1020_0862 ccpN; Control catabolite protein of gluconeogenesis K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D AYP1020_1016 ccpA_1; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AYP1020_1229 ccpA_2; Glucose-resistance amylase regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D AYP1020_0586 yurK; putative HTH-type transcriptional regulator YurK K03710 K03710; GntR family transcriptional regulator
D AYP1020_2266 gabR; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D AYP1020_1657 ydfH; putative HTH-type transcriptional regulator YdfH K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor
D AYP1020_1906 icaR; Intercellular adhesion protein R K21453 icaR; TetR/AcrR family transcriptional regulator, biofilm operon repressor
D AYP1020_0054 mgrA; Regulator of autolytic activity K18906 mgrA; MarR family transcriptional regulator, multiple gene regulator MgrA
D AYP1020_1043 rot; Repressor of toxins K20338 rot; MarR family transcriptional regulator, global regulator for virulence
D AYP1020_1541 tcaR; HTH-type transcriptional regulator TcaR K21454 tcaR; MarR family transcriptional regulator, teicoplanin-associated locus regulator
D AYP1020_1576 sarZ; accessory regulator Z K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AYP1020_0617 glnR; HTH-type transcriptional regulator GlnR K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D AYP1020_1955 cueR; Copper export regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D AYP1020_0800 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D AYP1020_0852 zur; Zinc-specific metallo-regulatory protein K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D AYP1020_1139 perR; Peroxide-responsive repressor PerR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D AYP1020_1834 arcR; HTH-type transcriptional regulator ArcR K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D AYP1020_0918 cymR; Cysteine metabolism repressor K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D AYP1020_2005 arsR; Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D AYP1020_2010 sdpR; Transcriptional repressor SdpR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D AYP1020_1335 czrA; HTH-type transcriptional repressor CzrA K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D AYP1020_1528 transcriptional regulator, Acidobacterial, PadR-family K10947 K10947; PadR family transcriptional regulator
D AYP1020_0001 ideR; Iron-dependent repressor IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D AYP1020_1504 glvR; Glv operon regulatory protein K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D AYP1020_0766 birA; Bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D AYP1020_1793 hypothetical protein K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D AYP1020_2228 purR; Pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D AYP1020_1234 rex; Redox-sensing transcriptional repressor rex K01926 rex; redox-sensing transcriptional repressor
D AYP1020_0564 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D AYP1020_2105 DNA-binding transcriptional repressor PuuR K07729 K07729; putative transcriptional regulator
D AYP1020_1523 anaerobic benzoate catabolism transcriptional regulator K07729 K07729; putative transcriptional regulator
D AYP1020_1262 mazE; Antitoxin MazE K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D AYP1020_0665 glcT; PtsG operon antiterminator K03480 glcT; transcriptional antiterminator
D AYP1020_1342 mtlR; Mannitol operon transcriptional activator K03483 mtlR; mannitol operon transcriptional activator
D AYP1020_1858 licR; putative licABCH operon regulator K02538 manR; mannose operon transcriptional activator
D AYP1020_1274 csoR; Copper-sensitive operon repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D AYP1020_2069 noc; Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AYP1020_2117 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AYP1020_0607 Glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D AYP1020_0819 argR_1; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D AYP1020_0880 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D AYP1020_1281 tenA; Putative thiaminase-2 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D AYP1020_1664 tenI; Regulatory protein TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D AYP1020_2270 ctsR; Transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D AYP1020_0140 cggR; Central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator
D AYP1020_0505 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D AYP1020_0968 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D AYP1020_0286 comK; Competence protein K K02250 comK; competence protein ComK
D AYP1020_0486 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:scap03021]
D AYP1020_1399 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AYP1020_2290 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AYP1020_2291 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AYP1020_1315 rpoE; RNAP delta factor K03048 rpoE; DNA-directed RNA polymerase subunit delta
D AYP1020_0517 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AYP1020_0859 rpoD_1; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D AYP1020_1987 rpoD_2; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D AYP1020_1257 sigB; Sigma-37 K03090 sigB; RNA polymerase sigma-B factor
D AYP1020_2282 RNA polymerase factor sigma-70 K27000 sigH; RNA polymerase sigma-H factor
D AYP1020_0575 nusA; Transcription termination/antitermination L factor K02600 nusA; transcription termination/antitermination protein NusA
D AYP1020_0823 nusB; N utilization substance protein B-like protein K03625 nusB; transcription antitermination protein NusB
D AYP1020_2284 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AYP1020_1260 rsbU; Phosphoserine phosphatase RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D AYP1020_1259 rsbV; Anti-anti-sigma-B factor K04749 rsbV; anti-sigma B factor antagonist
D AYP1020_1258 rsbW; Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D AYP1020_0903 greA; Transcript cleavage factor GreA K03624 greA; transcription elongation factor GreA
D AYP1020_1308 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:scap03019]
D AYP1020_0542 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AYP1020_0413 Ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AYP1020_0584 Ribonuclease J 2 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AYP1020_0595 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D AYP1020_0149 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AYP1020_1088 yhaM; 3'-5' exoribonuclease YhaM K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D AYP1020_1268 putative DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AYP1020_0856 cshB; DEAD-box ATP-dependent RNA helicase CshB K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D AYP1020_0090 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYP1020_1986 recQ_3; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYP1020_0789 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYP1020_0145 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYP1020_0583 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AYP1020_1308 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AYP1020_0979 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AYP1020_0878 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D AYP1020_1216 groL; Stress protein H5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AYP1020_0613 hfq; Host factor-I protein K03666 hfq; host factor-I protein
D AYP1020_1648 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AYP1020_0131 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:scap03011]
D AYP1020_0784 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AYP1020_0565 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AYP1020_1419 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AYP1020_0999 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AYP1020_1408 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AYP1020_2130 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AYP1020_2294 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AYP1020_1411 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AYP1020_1392 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AYP1020_1426 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AYP1020_1400 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AYP1020_2293 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AYP1020_1401 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AYP1020_0644 rpsN2; Alternate 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AYP1020_1412 rpsN1; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AYP1020_0582 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AYP1020_0547 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AYP1020_1416 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AYP1020_2132 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AYP1020_1421 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AYP1020_0883 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AYP1020_0873 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AYP1020_2286 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AYP1020_1422 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AYP1020_1425 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AYP1020_1424 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AYP1020_1413 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AYP1020_1410 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AYP1020_2049 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AYP1020_2287 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AYP1020_2285 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AYP1020_2288 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AYP1020_1393 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AYP1020_1415 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AYP1020_1406 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AYP1020_1418 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AYP1020_1398 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AYP1020_1409 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AYP1020_0550 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AYP1020_0961 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AYP1020_0938 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AYP1020_1420 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AYP1020_1423 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AYP1020_1414 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AYP1020_0936 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AYP1020_0531 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AYP1020_1417 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AYP1020_1407 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AYP1020_1307 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D AYP1020_0451 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AYP1020_0849 rpmG2_2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D AYP1020_0643 rpmG2_1; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D AYP1020_2064 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AYP1020_0962 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AYP1020_1402 rpmJ; Ribosomal protein II K02919 RP-L36; large subunit ribosomal protein L36
D AYP1020_2233 rplY; General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25
D AYP1020_2292 rplGB; Ribosome-associated protein L7Ae-like protein K07590 RP-L7A; large subunit ribosomal protein L7A
D AYP1020_1355 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_1134 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_2265 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_2261 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_2250 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_1250 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_2211 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_2209 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_1357 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_1252 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_2259 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_1138 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_2262 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_1135 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_1251 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_1356 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_2210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_2264 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_2260 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:scap03009]
D AYP1020_0542 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AYP1020_0865 era; GTPase Era K03595 era; GTPase
D AYP1020_0935 obg; GTP-binding protein obg K03979 obgE; GTPase [EC:3.6.5.-]
D AYP1020_0575 nusA; Transcription termination/antitermination L factor K02600 nusA; transcription termination/antitermination protein NusA
D AYP1020_0823 nusB; N utilization substance protein B-like protein K03625 nusB; transcription antitermination protein NusB
D AYP1020_2284 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AYP1020_1033 rsuA; Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D AYP1020_2225 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D AYP1020_0523 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D AYP1020_2289 rlmG; Ribosomal RNA large subunit methyltransferase G K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D AYP1020_0447 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D AYP1020_0875 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D AYP1020_2068 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AYP1020_0487 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D AYP1020_2221 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D AYP1020_2280 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D AYP1020_2039 rlmH; Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D AYP1020_0404 rlmI; Ribosomal RNA large subunit methyltransferase I K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D AYP1020_0524 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D AYP1020_1175 putative RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D AYP1020_0795 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D AYP1020_1096 rluD_3; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AYP1020_0266 rluD_1; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AYP1020_0504 rluD_2; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AYP1020_1238 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D AYP1020_0548 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D AYP1020_0876 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D AYP1020_0909 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D AYP1020_2279 mrnC; Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D AYP1020_1268 putative DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AYP1020_0856 cshB; DEAD-box ATP-dependent RNA helicase CshB K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D AYP1020_0528 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AYP1020_0783 der; GTP-binding protein EngA K03977 engA; GTPase
D AYP1020_0554 rbgA; Ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A
D AYP1020_0615 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D AYP1020_0894 GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D AYP1020_1302 rimN; t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AYP1020_0925 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AYP1020_0579 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D AYP1020_0574 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D AYP1020_2061 S4 domain protein YaaA K14761 rlbA; ribosome-associated protein
D AYP1020_0889 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D AYP1020_0868 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D AYP1020_0892 RNA-binding protein K07574 yhbY; RNA-binding protein
D AYP1020_0117 yvyD; SigL modulation protein K05808 hpf; ribosome hibernation promoting factor
D AYP1020_2120 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D AYP1020_0450 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:scap03016]
D AYP1020_0806 rbn; Ribonuclease BN K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D AYP1020_0767 cca; CCA-adding enzyme K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D AYP1020_0572 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AYP1020_0501 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AYP1020_1039 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AYP1020_2222 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AYP1020_2359 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AYP1020_2249 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AYP1020_0921 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AYP1020_0911 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AYP1020_0764 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AYP1020_0863 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D AYP1020_0965 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AYP1020_2055 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AYP1020_2278 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AYP1020_0947 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AYP1020_0922 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AYP1020_0463 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AYP1020_0464 pheT_1; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AYP1020_1010 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AYP1020_0255 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AYP1020_0924 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D AYP1020_1084 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AYP1020_1028 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D AYP1020_1394 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D AYP1020_0580 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D AYP1020_0915 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYP1020_0996 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYP1020_1302 rimN; t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AYP1020_0612 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AYP1020_2066 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D AYP1020_2067 mnmG; Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AYP1020_2065 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D AYP1020_2276 gltX; Glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D AYP1020_0065 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D AYP1020_2310 tadA_2; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D AYP1020_0602 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D AYP1020_0874 mtaB; Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D AYP1020_0560 trmFO; Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D AYP1020_0549 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D AYP1020_0858 trmK; tRNA (adenine(22)-N(1))-methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D AYP1020_1101 Putative tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D AYP1020_0462 Putative TrmH family tRNA/rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D AYP1020_0914 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AYP1020_0210 erpA; Iron-sulfur cluster insertion protein ErpA K13628 iscA; iron-sulfur cluster assembly protein
D AYP1020_0931 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D AYP1020_0080 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AYP1020_0079 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AYP1020_0078 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D AYP1020_0097 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AYP1020_1102 queG; Epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D AYP1020_1754 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D AYP1020_0930 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D AYP1020_0995 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AYP1020_2241 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D AYP1020_1239 UGMP family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D AYP1020_1237 gcp; t(6)A37 threonylcarbamoyladenosine biosynthesis protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D AYP1020_1240 ADP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D AYP1020_0920 thiF; Sulfur carrier protein ThiS adenylyltransferase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D AYP1020_0449 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D AYP1020_0149 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AYP1020_0583 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:scap03012]
D AYP1020_0578 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AYP1020_0963 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AYP1020_1235 yheS_2; putative ABC transporter ATP-binding protein YheS K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D AYP1020_0566 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D AYP1020_2296 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D AYP1020_2295 fusA; 85 kDa vitronectin-binding protein K02355 fusA; elongation factor G
D AYP1020_1305 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D AYP1020_0568 frr; Ribosome-releasing factor K02838 frr; ribosome recycling factor
D AYP1020_1304 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D AYP1020_2234 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D AYP1020_1403 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D AYP1020_0827 efp; Elongation factor P K02356 efp; elongation factor P
D AYP1020_0120 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D AYP1020_0277 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:scap03110]
D AYP1020_p68 clpE; Heat shock protein HSP1 K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D AYP1020_0244 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D AYP1020_2273 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D AYP1020_0957 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D AYP1020_0563 hslU; Unfoldase HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D AYP1020_0878 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D AYP1020_1216 groL; Stress protein H5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AYP1020_0877 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AYP1020_2244 hslO; Heat shock protein 33-like protein K04083 hslO; molecular chaperone Hsp33
D AYP1020_0879 grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D AYP1020_1577 hypothetical protein K13993 HSP20; HSP20 family protein
D AYP1020_1217 co-chaperonin GroES K04078 groES; chaperonin GroES
D AYP1020_1007 htrA; Serine protease Do-like HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D AYP1020_0279 Serine protease HtrA-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D AYP1020_2243 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AYP1020_1295 atpB; F-ATPase subunit 6 K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AYP1020_0224 Putative peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D AYP1020_1087 prsA; Foldase protein PrsA precursor K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D AYP1020_0470 trxA; Thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:scap04131]
D AYP1020_0777 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AYP1020_1036 ebhA; ECM-binding protein-like protein A K12472 EPS15; epidermal growth factor receptor substrate 15
D AYP1020_2008 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D AYP1020_1778 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D AYP1020_0141 gapA1; Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AYP1020_2143 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYP1020_1605 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYP1020_0978 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:scap04121]
C 03051 Proteasome
C 03032 DNA replication proteins [BR:scap03032]
D AYP1020_0749 rnhA; 14.7 kDa ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AYP1020_0781 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D AYP1020_2063 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AYP1020_2048 dnaC_2; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AYP1020_0312 dnaC_1; DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D AYP1020_0860 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AYP1020_0967 dnaB; Replication initiation and membrane attachment protein K03346 dnaB; replication initiation and membrane attachment protein
D AYP1020_0966 dnaI; Primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D AYP1020_0308 ssb_1; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D AYP1020_2131 ssb_2; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D AYP1020_1283 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D AYP1020_0983 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AYP1020_0573 polC_1; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D AYP1020_2062 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AYP1020_0884 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AYP1020_2216 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AYP1020_1172 polC_2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AYP1020_2206 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AYP1020_0555 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AYP1020_0465 rnhC; Ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D AYP1020_0972 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AYP1020_1182 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AYP1020_0752 ypcP; 5'-3' exonuclease K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-]
D AYP1020_2058 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AYP1020_2059 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AYP1020_0663 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AYP1020_0662 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AYP1020_0559 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AYP1020_1429 topB; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D AYP1020_p08 topB; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:scap03036]
D AYP1020_0542 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AYP1020_1778 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D AYP1020_0781 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D AYP1020_2063 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AYP1020_1329 dps; DPS protein-like protein K04047 dps; starvation-inducible DNA-binding protein
D AYP1020_0613 hfq; Host factor-I protein K03666 hfq; host factor-I protein
D AYP1020_0543 smc; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D AYP1020_0797 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D AYP1020_0796 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D AYP1020_0493 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AYP1020_2239 divIC; Cell division protein DivIC K13052 divIC; cell division protein DivIC
D AYP1020_1021 sftA; Septum-associated FtsK-like translocase of DNA K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AYP1020_0585 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AYP1020_0488 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D AYP1020_0492 divIB; Cell division protein DivIB K03589 ftsQ; cell division protein FtsQ
D AYP1020_0437 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D AYP1020_0494 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AYP1020_0466 zapA; Z ring-associated protein ZapA K09888 zapA; cell division protein ZapA
D AYP1020_0923 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AYP1020_0997 ezrA; Septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D AYP1020_0500 divIVA; Minicell-associated protein DivIVA K04074 divIVA; cell division initiation protein
D AYP1020_0497 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF
D AYP1020_0940 mreC; Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D AYP1020_0939 mreD; Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D AYP1020_1271 rodA; Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D AYP1020_p55 soj; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D AYP1020_2069 noc; Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AYP1020_2117 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AYP1020_0663 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AYP1020_0662 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AYP1020_2067 mnmG; Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AYP1020_2068 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AYP1020_0560 trmFO; Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D AYP1020_0561 xerC; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D AYP1020_0799 xerD; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D AYP1020_2237 mazG; Nucleoside triphosphate pyrophosphohydrolase/pyrophosphatase MazG K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D AYP1020_1358 minD; Cell division inhibitor MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AYP1020_0956 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein
D AYP1020_0133 whiA; Sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:scap03400]
D AYP1020_1716 ogt; Methylated-DNA--protein-cysteine methyltransferase, constitutive K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D AYP1020_0059 phrA; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D AYP1020_2331 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AYP1020_1525 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D AYP1020_1146 yfhQ; putative A/G-specific adenine glycosylase YfhQ K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AYP1020_0762 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AYP1020_1065 ytkD; Putative 8-oxo-dGTP diphosphatase YtkD K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AYP1020_2126 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AYP1020_2128 mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AYP1020_0948 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AYP1020_0971 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AYP1020_0855 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D AYP1020_0927 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AYP1020_1182 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AYP1020_0972 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AYP1020_0125 uvrA_1; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D AYP1020_0124 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D AYP1020_0471 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D AYP1020_1183 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AYP1020_2290 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AYP1020_2291 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AYP1020_1399 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AYP1020_1315 rpoE; RNAP delta factor K03048 rpoE; DNA-directed RNA polymerase subunit delta
D AYP1020_0517 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AYP1020_2235 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AYP1020_0605 mutS_1; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D AYP1020_0469 mutS2; MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2
D AYP1020_0606 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D AYP1020_0822 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AYP1020_0821 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AYP1020_0983 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AYP1020_0573 polC_1; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D AYP1020_2062 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AYP1020_0884 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AYP1020_2216 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AYP1020_1172 polC_2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AYP1020_2206 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AYP1020_0308 ssb_1; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D AYP1020_2131 ssb_2; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D AYP1020_1283 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D AYP1020_0912 recD; Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D AYP1020_0594 recA; Recombinase A K03553 recA; recombination protein RecA
D AYP1020_0933 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AYP1020_0932 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AYP1020_0519 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AYP1020_0655 sbcC; Nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D AYP1020_0654 sbcD; Nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D AYP1020_2274 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D AYP1020_2060 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D AYP1020_0536 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AYP1020_0864 recO; Recombination protein O K03584 recO; DNA repair protein RecO (recombination protein O)
D AYP1020_2208 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D AYP1020_0818 recN; Recombination protein N K03631 recN; DNA repair protein RecN (Recombination protein N)
D AYP1020_0759 recU; Holliday junction resolvase RecU K03700 recU; recombination protein U
D AYP1020_0237 addA; ATP-dependent helicase/nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D AYP1020_0236 addB; ATP-dependent helicase/deoxyribonuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D AYP1020_2058 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AYP1020_2059 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AYP1020_0559 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AYP1020_0781 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D AYP1020_0090 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYP1020_1986 recQ_3; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYP1020_0789 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYP1020_1173 dinB_2; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D AYP1020_0671 dinB_1; DNA polymerase IV K03502 umuC; DNA polymerase V
D AYP1020_0647 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D AYP1020_1151 recX; Regulatory protein RecX K03565 recX; regulatory protein
D AYP1020_0468 polX; DNA polymerase/3'-5' exonuclease PolX K02347 polX; DNA polymerase (family X)
D AYP1020_0765 dinG; putative ATP-dependent helicase DinG-like protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D AYP1020_0100 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AYP1020_0101 nrdF; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AYP1020_0984 nrnA_1; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:scap03029]
D AYP1020_0578 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AYP1020_0963 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AYP1020_0566 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D AYP1020_2296 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D AYP1020_2295 fusA; 85 kDa vitronectin-binding protein K02355 fusA; elongation factor G
D AYP1020_0865 era; GTPase Era K03595 era; GTPase
D AYP1020_1010 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AYP1020_1039 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AYP1020_0921 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AYP1020_0863 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D AYP1020_2359 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AYP1020_1178 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AYP1020_1177 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AYP1020_1179 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AYP1020_0308 ssb_1; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D AYP1020_2131 ssb_2; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D AYP1020_1283 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D AYP1020_0878 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D AYP1020_0879 grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D AYP1020_1216 groL; Stress protein H5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AYP1020_1217 co-chaperonin GroES K04078 groES; chaperonin GroES
D AYP1020_0877 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AYP1020_0915 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYP1020_0996 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYP1020_1358 minD; Cell division inhibitor MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AYP1020_0440 ctaB2; Protoheme IX farnesyltransferase 2 K02257 COX10; heme o synthase [EC:2.5.1.141]
D AYP1020_0439 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D AYP1020_1620 yidC_2; Membrane protein YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYP1020_1277 yidC_1; Membrane protein YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:scap02000]
D AYP1020_1144 Putative multidrug export ATP-binding/permease protein K24708 K24708; ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-]
D AYP1020_0011 bmrA; Multidrug resistance ABC transporter ATP-binding/permease protein BmrA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D AYP1020_0053 irtB; Iron import ATP-binding/permease protein IrtB K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AYP1020_0052 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D AYP1020_0089 yjjK; putative ABC transporter ATP-binding protein YjjK K15738 uup; ABC transport system ATP-binding/permease protein
D AYP1020_1454 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D AYP1020_1453 modB; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D AYP1020_1452 cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AYP1020_1868 futA1; Iron uptake protein A1 precursor K02012 afuA; iron(III) transport system substrate-binding protein
D AYP1020_1867 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein
D AYP1020_1869 potA_2; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AYP1020_0426 potD; Spermidine/putrescine-binding periplasmic protein precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AYP1020_0425 ydcV; Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein
D AYP1020_0424 potB; Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D AYP1020_0423 potA_1; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D AYP1020_1874 gbuC; Glycine betaine/carnitine transport binding protein GbuC precursor K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AYP1020_1628 opuCC_1; Osmoprotectant-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D AYP1020_0092 opuCB_1; Glycine betaine/carnitine/choline transport system permease protein OpuCB K05845 opuC; osmoprotectant transport system substrate-binding protein
D AYP1020_1966 opuCC_2; Carnitine transport binding protein OpuCC precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D AYP1020_1627 opuCD_1; Glycine betaine/carnitine/choline transport system permease protein OpuCD K05846 opuBD; osmoprotectant transport system permease protein
D AYP1020_1629 opuCB_2; Carnitine transport permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D AYP1020_1965 opuCD_2; Glycine betaine/carnitine/choline transport system permease protein OpuCD K05846 opuBD; osmoprotectant transport system permease protein
D AYP1020_1630 opuCA_2; Carnitine transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AYP1020_0091 opuCA_1; Carnitine transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AYP1020_0733 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AYP1020_0731 lipO; Lipoprotein LplA K17318 lplA; putative aldouronate transport system substrate-binding protein
D AYP1020_0732 yteP; putative multiple-sugar transport system permease YteP K17319 lplB; putative aldouronate transport system permease protein
D AYP1020_0730 araQ; L-arabinose transport system permease protein AraQ K17320 lplC; putative aldouronate transport system permease protein
D AYP1020_1636 ABC-type uncharacterized transport system, permease component K02069 STAR2; UDP-glucose/iron transport system permease protein
D AYP1020_1637 ybbL; putative ABC transporter ATP-binding protein YbbL K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D AYP1020_0698 pstS; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D AYP1020_0697 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D AYP1020_0696 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D AYP1020_0695 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AYP1020_1898 phnD; Phosphate-import protein PhnD precursor K02044 phnD; phosphonate transport system substrate-binding protein
D AYP1020_1895 phnE_1; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AYP1020_1896 phnE_2; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AYP1020_1897 glnQ_2; Glutamine transport ATP-binding protein GlnQ K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AYP1020_1602 putative amino-acid ABC transporter-binding protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D AYP1020_1601 tcyB; L-cystine transport system permease protein TcyB K10009 tcyB; L-cystine transport system permease protein
D AYP1020_1600 tcyC; L-cystine import ATP-binding protein TcyC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D AYP1020_1104 artQ; Arginine transport system permease protein ArtQ K17077 artQ; arginine/lysine/histidine transport system permease protein
D AYP1020_1103 glnQ_1; Glutamine transport ATP-binding protein GlnQ K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D AYP1020_0181 metQ_1; Methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D AYP1020_2187 metQ_2; 28 kDa outer membrane protein K02073 metQ; D-methionine transport system substrate-binding protein
D AYP1020_0180 metP_1; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D AYP1020_2186 metP_2; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D AYP1020_0179 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D AYP1020_2185 metN; Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D AYP1020_0254 dppE; Dipeptide-binding protein DppE precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D AYP1020_0250 oppB; Stage 0 sporulation protein KB K15581 oppB; oligopeptide transport system permease protein
D AYP1020_0251 oppC; Stage 0 sporulation protein KC K15582 oppC; oligopeptide transport system permease protein
D AYP1020_0252 oppD; Stage 0 sporulation protein KD K15583 oppD; oligopeptide transport system ATP-binding protein
D AYP1020_0253 oppF; Stage 0 sporulation protein KE K10823 oppF; oligopeptide transport system ATP-binding protein
D AYP1020_1590 gsiB; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AYP1020_0691 gsiC; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AYP1020_0690 dppC; Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AYP1020_0688 gsiA; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AYP1020_0686 ddpF; putative D,D-dipeptide transport ATP-binding protein DdpF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AYP1020_1370 yfmC_1; Ferric-citrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D AYP1020_1829 yfmC_2; Ferric-citrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D AYP1020_1368 fecD; Iron(III) dicitrate transport system permease protein FecD K23182 fecD; ferric citrate transport system permease protein
D AYP1020_1369 yfiZ; putative siderophore transport system permease protein YfiZ precursor K23183 fecC; ferric citrate transport system permease protein
D AYP1020_1459 fhuD; Iron(III)-hydroxamate-binding protein FhuD K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D AYP1020_0015 feuB; Iron-uptake system permease protein FeuB K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D AYP1020_0016 feuC; Iron-uptake system permease protein FeuC K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D AYP1020_0014 yusV_1; putative siderophore transport system ATP-binding protein YusV K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D AYP1020_0457 isdE; iron-regulated protein F K25113 htsA; heme transport system substrate-binding protein
D AYP1020_0458 isdF; iron-regulated protein G K25114 htsB; heme transport system permease protein
D AYP1020_0459 yusV_2; putative siderophore transport system ATP-binding protein YusV K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D AYP1020_0456 isdA_2; transferrin-binding protein A K14193 isdA; iron-regulated surface determinant protein A
D AYP1020_0453 isdA_1; transferrin-binding protein A K14193 isdA; iron-regulated surface determinant protein A
D AYP1020_0455 isdC; Iron-regulated protein D K25118 isdC; iron-regulated surface determinant protein C
D AYP1020_2364 btuF; Vitamin B12-binding protein precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D AYP1020_2365 putative ABC transporter permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D AYP1020_2385 psaA; Pneumococcal surface adhesin A K19975 mntC; manganese transport system substrate-binding protein
D AYP1020_2386 mntB; Manganese transport system membrane protein MntB K19976 mntB; manganese transport system permease protein
D AYP1020_2387 adcC_2; putative zinc transport system ATP-binding protein AdcC K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D AYP1020_1674 adcA_2; putative zinc transport system zinc-binding lipoprotein AdcA precursor K09815 znuA; zinc transport system substrate-binding protein
D AYP1020_1595 adcA_1; putative zinc transport system zinc-binding lipoprotein AdcA precursor K09815 znuA; zinc transport system substrate-binding protein
D AYP1020_0853 adcB; putative zinc transport system permease protein AdcB K09816 znuB; zinc transport system permease protein
D AYP1020_0854 adcC_1; putative zinc transport system ATP-binding protein AdcC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D AYP1020_1457 bioY; Biotin ECF transporter S component BioY K03523 bioY; biotin transport system substrate-specific component
D AYP1020_0399 ykoC; Putative HMP/thiamine permease protein YkoC K16785 ecfT; energy-coupling factor transport system permease protein
D AYP1020_1395 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D AYP1020_1397 ecfA1; Energy-coupling factor transporter ATP-binding protein EcfA1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D AYP1020_1396 ecfA2_2; Energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D AYP1020_0400 ykoD; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D AYP1020_0401 ykoE; Putative HMP/thiamine permease protein YkoE K16925 ykoE; energy-coupling factor transport system permease protein
D AYP1020_0007 tagG; Teichoic acid translocation permease protein TagG K09692 tagG; teichoic acid transport system permease protein
D AYP1020_1148 hypothetical protein K09692 tagG; teichoic acid transport system permease protein
D AYP1020_0006 tagH_1; Teichoic acids export ATP-binding protein TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D AYP1020_1149 tagH_2; Teichoic acids export ATP-binding protein TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D AYP1020_1544 acidobacterial duplicated orphan permease K09813 hrtB; hemin transport system permease protein
D AYP1020_1543 hrtA; Putative hemin import ATP-binding protein HrtA K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D AYP1020_2085 bceB_2; Bacitracin export permease protein BceB K11632 bceB; bacitracin transport system permease protein
D AYP1020_2086 bceA_3; Bacitracin export ATP-binding protein BceA K11631 bceA; bacitracin transport system ATP-binding protein
D AYP1020_1815 yxdM; ABC transporter permease protein YxdM K19084 braE; bacitracin transport system permease protein
D AYP1020_1816 yxdL; ABC transporter ATP-binding protein YxdL K19083 braD; bacitracin transport system ATP-binding protein
D AYP1020_0028 bceB_1; Bacitracin export permease protein BceB K19080 vraG; cationic antimicrobial peptide transport system permease protein
D AYP1020_0027 bceA_1; Bacitracin export ATP-binding protein BceA K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D AYP1020_1082 putative ABC-type exoprotein transport system, permease component K25157 ecsB; ABC-2 type transport system permease protein
D AYP1020_1083 ecsA; ABC-type transporter ATP-binding protein EcsA K25158 ecsA; ABC-2 type transport system ATP-binding protein
D AYP1020_1206 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D AYP1020_0627 inner membrane transport permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AYP1020_1519 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AYP1020_1207 yxlF; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AYP1020_1209 ytrB; ABC transporter ATP-binding protein YtrB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AYP1020_0626 ybhF; putative ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AYP1020_2103 Fluoroquinolones export ATP-binding proteinc K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AYP1020_1520 lptB; Lipopolysaccharide export system ATP-binding protein LptB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AYP1020_1981 acidobacterial duplicated orphan permease K02004 ABC.CD.P; putative ABC transport system permease protein
D AYP1020_2079 macB_2; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D AYP1020_1980 bceA_2; Bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AYP1020_2078 macB_1; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AYP1020_0185 yurY; Vegetative protein 296 K09013 sufC; Fe-S cluster assembly ATP-binding protein
D AYP1020_2326 proP; Proline porter II K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D AYP1020_1663 sauU; putative sulfoacetate transporter SauU K03535 gudP; MFS transporter, ACS family, glucarate transporter
D AYP1020_0527 yycB; putative transporter YycB K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D AYP1020_1578 narT; putative nitrate transporter NarT K10850 narT; MFS transporter, NNP family, putative nitrate transporter
D AYP1020_1539 bcr_1; Sulfonamide resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AYP1020_1612 bcr_2; Sulfonamide resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AYP1020_0063 tetA_1; Metal-tetracycline/H(+) antiporter K19576 norA; MFS transporter, DHA1 family, quinolone resistance protein
D AYP1020_1635 pbuE_1; Purine efflux pump PbuE K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump
D AYP1020_1902 ydhP; Inner membrane transport protein YdhP K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D AYP1020_1373 enterobactin exporter EntS K23448 sfaA; MFS transporter, DHA1 family, staphyloferrin A biosynthesis exporter
D AYP1020_1946 putative transporter K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D AYP1020_1624 norB_1; Quinolone resistance protein NorB K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D AYP1020_1789 norB_2; Quinolone resistance protein NorB K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D AYP1020_1359 emrB_1; Multidrug resistance protein B K18934 lmrS; MFS transporter, DHA2 family, multidrug resistance protein
D AYP1020_1949 emrB_4; Multidrug resistance protein B K18934 lmrS; MFS transporter, DHA2 family, multidrug resistance protein
D AYP1020_1361 hsrA_2; High-copy suppressor of rspA K18935 sdrM; MFS transporter, DHA2 family, multidrug resistance protein
D AYP1020_1603 emrB_3; Multidrug resistance protein B K18936 mdeA; MFS transporter, DHA2 family, multidrug resistance protein
D AYP1020_1879 bmr3; Multidrug-efflux transporter 3 K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D AYP1020_0407 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AYP1020_0406 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D AYP1020_0739 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AYP1020_1707 glcB; PTS system glucoside-specific EIICBA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D AYP1020_1005 ptsG; EIICBA-Glc K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D AYP1020_1568 sacX; PTS system sac EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AYP1020_1494 PTS system EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AYP1020_1503 malP; PTS system maltose-specific EIICB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D AYP1020_0068 fruA; EIIABC-Fru K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D AYP1020_1343 mtlF; Mannitol-specific phosphotransferase enzyme IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D AYP1020_1341 mtlA; EIICB-Mtl K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D AYP1020_1385 lacF; Lactose-specific phosphotransferase enzyme IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D AYP1020_1384 lacE; EIICB-Lac K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D AYP1020_1859 manP; EIIBCA-Man K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D AYP1020_0019 dhaM; PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D AYP1020_0608 glpF; Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D AYP1020_1230 amt; Ammonia transporter K03320 amt; ammonium transporter, Amt family
D AYP1020_0656 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D AYP1020_2118 ykuT; putative MscS family protein YkuT K22044 ybiO; moderate conductance mechanosensitive channel
D AYP1020_0267 mgtE; Magnesium transporter MgtE K06213 mgtE; magnesium transporter
D AYP1020_1461 urea transporter K08717 utp; urea transporter
D AYP1020_1531 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter
D AYP1020_1567 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D AYP1020_1058 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D AYP1020_1059 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D AYP1020_0070 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AYP1020_0190 tlyC; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AYP1020_1892 sraP; serene threonine rich antigen K21449 ata; trimeric autotransporter adhesin
D AYP1020_1625 lrgA; Antiholin-like protein LrgA K05338 lrgA; holin-like protein
D AYP1020_1710 cidA; Holin-like protein CidA K06518 cidA; holin-like protein
D AYP1020_0964 lysP_2; Lysine-specific permease K11733 lysP; lysine-specific permease
D AYP1020_1616 cycA_2; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D AYP1020_1741 cycA_3; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D AYP1020_0977 cycA_1; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D AYP1020_1836 arcD; Arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D AYP1020_1336 czcD; Cadmium, cobalt and zinc/H(+)-K(+) antiporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D AYP1020_0088 zupT; Zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D AYP1020_1479 ykkC; Multidrug resistance protein YkkC K18924 ykkC; paired small multidrug resistance pump
D AYP1020_1480 ykkD; Multidrug resistance protein YkkD K18925 ykkD; paired small multidrug resistance pump
D AYP1020_1431 glcU_1; putative glucose uptake protein GlcU K05340 glcU; glucose uptake protein
D AYP1020_1691 glcU_2; putative glucose uptake protein GlcU K06216 rbsU; putative ribose uptake protein
D AYP1020_1931 putative chloramphenical resistance permease RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D AYP1020_2373 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D AYP1020_1518 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D AYP1020_0213 H+/gluconate symporter K07084 yuiF; putative amino acid transporter
D AYP1020_1655 gntT; Gnt-I system K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D AYP1020_1795 dcuA; Anaerobic C4-dicarboxylate transporter DcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D AYP1020_1549 lctP; L-lactate permease K03303 lutP; lactate permease
D AYP1020_0657 opuD_1; Glycine betaine transporter OpuD K05020 opuD; glycine betaine transporter
D AYP1020_1378 opuD_2; Glycine betaine transporter OpuD K05020 opuD; glycine betaine transporter
D AYP1020_1180 putP; Proline permease K11928 putP; sodium/proline symporter
D AYP1020_1573 gltT; Glutamate-aspartate carrier protein K11102 gltP; proton glutamate symport protein
D AYP1020_1529 gltS; Glutamate permease K03312 gltS; glutamate:Na+ symporter, ESS family
D AYP1020_1475 mleN_1; Malate-2H(+)/Na(+)-lactate antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D AYP1020_1617 nhaK_1; Sodium, potassium, lithium and rubidium/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D AYP1020_2384 nhaK_2; Sodium, potassium, lithium and rubidium/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D AYP1020_0280 ktrB; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein
D AYP1020_0411 ktrA; Ktr system potassium uptake protein A K03499 trkA; trk/ktr system potassium uptake protein
D AYP1020_0506 pyrP; Uracil transporter K02824 uraA; uracil permease
D AYP1020_2155 pucK; Uric acid permease PucK K16169 pbuX; xanthine permease
D AYP1020_1428 pbuG; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease
D AYP1020_2269 nupC; Nucleoside-transport system protein NupC K11535 nupC; nucleoside transport protein
D AYP1020_0012 nupG; Purine nucleoside transport protein NupG K16323 yxjA; purine nucleoside transport protein
D AYP1020_1510 bicA; Bicarbonate transporter BicA K03321 TC.SULP; sulfate permease, SulP family
D AYP1020_0429 mntH; Divalent metal cation transporter MntH K03322 mntH; manganese transport protein
D AYP1020_2008 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D AYP1020_1198 arsB_1; Arsenic efflux pump protein K03893 arsB; arsenical pump membrane protein
D AYP1020_2011 arsB_2; Arsenic efflux pump protein K03893 arsB; arsenical pump membrane protein
D AYP1020_0222 mnhA1; Mnh complex subunit A1 K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D AYP1020_2377 mrpA; Multiple resistance and pH homeostasis protein A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D AYP1020_0221 mnhB1; Mrp complex subunit B1 K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D AYP1020_2378 mrpB; Multiple resistance and pH homeostasis protein B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D AYP1020_0220 mnhC1_1; Mrp complex subunit C1 K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D AYP1020_2379 mnhC1_2; Mrp complex subunit C1 K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D AYP1020_0219 mnhD1; Mrp complex subunit D1 K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D AYP1020_2380 mrpD; Multiple resistance and pH homeostasis protein D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D AYP1020_0218 mnhE1; Mrp complex subunit E1 K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D AYP1020_2381 mrpE; Multiple resistance and pH homeostasis protein E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D AYP1020_0217 mnhF1; Mrp complex subunit F1 K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D AYP1020_2382 mrpF; Multiple resistance and pH homeostasis protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D AYP1020_0216 mnhG1; Mrp complex subunit G1 K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D AYP1020_2383 mrpG; Multiple resistance and pH homeostasis protein G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D AYP1020_1433 Membrane transport protein K24180 mleP; malate permease and related proteins
D AYP1020_0169 argO; Arginine exporter protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO
D AYP1020_2054 ygaZ; Inner membrane protein YgaZ K26605 azlC; branched chain amino acid efflux pump
D AYP1020_2053 putative membrane protein K26606 azlD; branched chain amino acid efflux pump
D AYP1020_0792 ribU; Riboflavin ECF transporter S component RibU K23675 fmnP; riboflavin transporter
D AYP1020_0748 yhhQ; Inner membrane protein YhhQ K09125 yhhQ; queuosine precursor transporter
D AYP1020_0437 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D AYP1020_1556 efeU; Ferrous iron uptake protein K07243 FTR; high-affinity iron transporter
D AYP1020_1558 efeM; putative iron uptake system component EfeM precursor K07224 efeO; iron uptake system component EfeO
D AYP1020_1557 efeN; putative deferrochelatase/peroxidase EfeN precursor K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D AYP1020_1585 narG; Respiratory nitrate reductase 1 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D AYP1020_1584 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D AYP1020_1582 narX; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D AYP1020_1720 FeoA domain protein K04758 feoA; ferrous iron transport protein A
D AYP1020_1719 feoB; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D AYP1020_0452 isdH; surface protein I K25121 isdH; iron-regulated surface determinant protein H
D AYP1020_1564 ycnJ; Copper transport protein YcnJ precursor K14166 ycnJ; copper transport protein
C 02044 Secretion system [BR:scap02044]
D AYP1020_0498 YGGT family protein K02221 yggT; YggT family protein
D AYP1020_0887 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA
D AYP1020_0886 tadA_1; tRNA-specific adenosine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D AYP1020_0885 ComEC family competence protein K02238 comEC; competence protein ComEC
D AYP1020_0115 primosome assembly protein PriA K02240 comFA; competence protein ComFA
D AYP1020_0116 DNA utilization protein GntX K02242 comFC; competence protein ComFC
D AYP1020_0842 xpsE; Type II traffic warden ATPase K02243 comGA; competence protein ComGA
D AYP1020_0841 epsF; General secretion pathway protein F K02244 comGB; competence protein ComGB
D AYP1020_0840 comGC; ComG operon protein 3 precursor K02245 comGC; competence protein ComGC
D AYP1020_0839 Tfp pilus assembly protein FimT K02246 comGD; competence protein ComGD
D AYP1020_0945 outO; Pectic enzymes secretion protein OutO K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AYP1020_0286 comK; Competence protein K K02250 comK; competence protein ComK
D AYP1020_1887 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AYP1020_0119 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AYP1020_0928 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D AYP1020_2283 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AYP1020_0147 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AYP1020_1891 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AYP1020_1405 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AYP1020_0546 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AYP1020_0544 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D AYP1020_0929 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AYP1020_1620 yidC_2; Membrane protein YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYP1020_1277 yidC_1; Membrane protein YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYP1020_1890 accessory Sec system protein Asp1 K12268 asp1; accessory secretory protein Asp1
D AYP1020_1889 asp2; Orf2 K12269 asp2; accessory secretory protein Asp2
D AYP1020_1888 asp3; Orf3 K12270 asp3; accessory secretory protein Asp3
D AYP1020_1554 tatAy; Sec-independent protein translocase protein TatAy K03116 tatA; sec-independent protein translocase protein TatA
D AYP1020_1555 tatC2; Sec-independent protein translocase protein TatCy K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:scap02042]
D AYP1020_0070 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AYP1020_0190 tlyC; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AYP1020_1222 hld; delta hemolysin K11039 hld; delta-hemolysin
D AYP1020_1362 hemolysin K11068 hlyIII; hemolysin III
D AYP1020_1985 hlb; beta hemolysin K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:scap02022]
D AYP1020_0973 phoR; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AYP1020_0974 phoP; Alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D AYP1020_1972 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AYP1020_1973 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AYP1020_0793 srrB; Sensor protein SrrB K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D AYP1020_0794 srrA; respiratory response protein A K07775 resD; two-component system, OmpR family, response regulator ResD
D AYP1020_2043 walK; Sensor protein kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D AYP1020_2044 walR; Transcriptional regulatory protein WalR K07668 vicR; two-component system, OmpR family, response regulator VicR
D AYP1020_0073 saeS; Histidine protein kinase SaeS K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D AYP1020_0074 saeR; exoprotein expression protein R K10682 saeR; two-component system, OmpR family, response regulator SaeR
D AYP1020_1817 graS_2; Sensor histidine kinase GraS K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D AYP1020_1818 graR_2; Glycopeptide resistance-associated protein R K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D AYP1020_0026 graS_1; Sensor histidine kinase GraS K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D AYP1020_0025 graR_1; Glycopeptide resistance-associated protein R K19078 graR; two-component system, OmpR family, response regulator protein GraR
D AYP1020_0725 arlS; Signal transduction histidine-protein kinase ArlS K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D AYP1020_0726 arlR; Response regulator ArlR K18941 arlR; two-component system, OmpR family, response regulator ArlR
D AYP1020_1546 hssS; Heme sensor protein HssS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AYP1020_1545 hssR; Heme response regulator HssR K02483 K02483; two-component system, OmpR family, response regulator
D AYP1020_0628 desK; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D AYP1020_0629 narL; putative transcriptional regulatory protein NarL K07693 desR; two-component system, NarL family, response regulator DesR
D AYP1020_1163 vraS; Sensor protein VraS K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3]
D AYP1020_1162 vraR_2; Response regulator protein VraR K07694 vraR; two-component system, NarL family, vancomycin resistance associated response regulator VraR
D AYP1020_1580 nreB; Oxygen sensor histidine kinase NreB K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D AYP1020_1579 nreC; Nitrogen regulation protein C K07696 nreC; two-component system, NarL family, response regulator NreC
D AYP1020_1095 liaS; Sensor histidine kinase LiaS K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D AYP1020_1094 vraR_1; Response regulator protein VraR K02479 K02479; two-component system, NarL family, response regulator
D AYP1020_1225 agrC; Accessory gene regulator protein C K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D AYP1020_1226 agrA; Accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
C 02035 Bacterial motility proteins [BR:scap02035]
D AYP1020_1602 putative amino-acid ABC transporter-binding protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:scap04812]
D AYP1020_0494 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AYP1020_0493 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AYP1020_p55 soj; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D AYP1020_2069 noc; Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AYP1020_2117 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:scap04147]
D AYP1020_1778 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D AYP1020_0145 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYP1020_0141 gapA1; Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AYP1020_0142 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AYP1020_0978 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AYP1020_1216 groL; Stress protein H5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AYP1020_0878 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D AYP1020_0232 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AYP1020_2156 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AYP1020_2296 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D AYP1020_1084 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AYP1020_1769 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYP1020_2322 yhfT; putative acyl--CoA ligase YhfT K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AYP1020_2109 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_2323 yhfS; Putative acetyl-CoA C-acetyltransferase YhfS K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYP1020_1404 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AYP1020_0926 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AYP1020_0230 argH1; Argininosuccinate lyase 1 K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AYP1020_0231 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AYP1020_0609 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AYP1020_0618 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AYP1020_0951 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AYP1020_1820 phoA; Alkaline phosphatase 4 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AYP1020_1003 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYP1020_0397 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AYP1020_0420 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0817 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYP1020_0807 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AYP1020_0143 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AYP1020_2143 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYP1020_1605 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:scap02048]
D AYP1020_1855 hsdR_1; Type-1 restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D AYP1020_1853 Type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D AYP1020_1991 Type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D AYP1020_2019 Type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D AYP1020_1854 putative type I restriction enzymeP M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D AYP1020_1992 hsdM; Type I restriction enzyme EcoKI M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D AYP1020_0291 bcgIA; Restriction enzyme BgcI subunit alpha K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D AYP1020_0992 Type I restriction-modification system methyltransferase subunit K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D AYP1020_1989 mcrB; 5-methylcytosine-specific restriction enzyme B K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D AYP1020_p47 mazF; mRNA interferase MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D AYP1020_1261 mazF; mRNA interferase MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D AYP1020_p48 putative addiction module antidote K07172 mazE; antitoxin MazE
D AYP1020_1262 mazE; Antitoxin MazE K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D AYP1020_p20 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D AYP1020_p19 prevent-host-death family protein K19159 yefM; antitoxin YefM
D AYP1020_0494 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AYP1020_0663 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AYP1020_0662 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AYP1020_0915 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYP1020_0996 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:scap01504]
D AYP1020_0054 mgrA; Regulator of autolytic activity K18906 mgrA; MarR family transcriptional regulator, multiple gene regulator MgrA
D AYP1020_0026 graS_1; Sensor histidine kinase GraS K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D AYP1020_0025 graR_1; Glycopeptide resistance-associated protein R K19078 graR; two-component system, OmpR family, response regulator protein GraR
D AYP1020_0202 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AYP1020_0203 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D AYP1020_0204 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYP1020_0205 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D AYP1020_0667 mprF; Phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D AYP1020_0027 bceA_1; Bacitracin export ATP-binding protein BceA K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D AYP1020_0028 bceB_1; Bacitracin export permease protein BceB K19080 vraG; cationic antimicrobial peptide transport system permease protein
D AYP1020_1955 cueR; Copper export regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D AYP1020_0011 bmrA; Multidrug resistance ABC transporter ATP-binding/permease protein BmrA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D AYP1020_1624 norB_1; Quinolone resistance protein NorB K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D AYP1020_1789 norB_2; Quinolone resistance protein NorB K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:scap00537]
D AYP1020_1820 phoA; Alkaline phosphatase 4 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified [BR:scap04990]
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:scap03100]
D AYP1020_1125 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AYP1020_2258 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AYP1020_1136 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AYP1020_0134 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYP1020_0478 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYP1020_1127 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYP1020_2256 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYP1020_0287 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AYP1020_1354 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AYP1020_1071 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AYP1020_2045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYP1020_1118 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYP1020_1075 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYP1020_1121 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYP1020_1111 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AYP1020_1350 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AYP1020_1112 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AYP1020_1070 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AYP1020_2046 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AYP1020_1353 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AYP1020_1129 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_2254 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1072 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1253 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1107 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1109 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1108 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYP1020_1073 tRNA-His K14226 tRNA-His; tRNA His
D AYP1020_1113 tRNA-His K14226 tRNA-His; tRNA His
D AYP1020_1137 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AYP1020_2263 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AYP1020_1254 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYP1020_1130 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYP1020_1128 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYP1020_2255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYP1020_1106 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYP1020_1131 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AYP1020_1349 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AYP1020_2253 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AYP1020_1076 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYP1020_1119 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYP1020_1123 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYP1020_1124 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYP1020_1074 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AYP1020_1117 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AYP1020_1126 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AYP1020_2257 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AYP1020_1120 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYP1020_2204 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYP1020_1122 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYP1020_0288 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYP1020_1069 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYP1020_1116 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYP1020_2252 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYP1020_1132 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYP1020_1904 tRNA-OTHER K14234 tRNA-Thr; tRNA Thr
D AYP1020_1114 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AYP1020_1115 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AYP1020_1351 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AYP1020_1133 tRNA-Val K14237 tRNA-Val; tRNA Val
D AYP1020_2251 tRNA-Val K14237 tRNA-Val; tRNA Val
D AYP1020_1352 tRNA-Val K14237 tRNA-Val; tRNA Val
D AYP1020_2209 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_1357 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_1252 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_2259 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_1138 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_2262 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYP1020_1135 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_1251 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_1356 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_2210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_2264 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_2260 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYP1020_1355 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_1134 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_2265 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_2261 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_2250 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_1250 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_2211 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYP1020_0151 ssrA; transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D AYP1020_2346 yhdN_2; General stress protein 69 K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-]
D AYP1020_1476 odh; Opine dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D AYP1020_1380 yfmJ; Putative NADP-dependent oxidoreductase YfmJ K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D AYP1020_1823 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D AYP1020_0240 cdr; Coenzyme A disulfide reductase K08255 cdr; CoA-disulfide reductase [EC:1.8.1.14]
D AYP1020_2146 ahpF; Alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D AYP1020_0787 Glucosaminate ammonia-lyase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D AYP1020_1882 msrAB; Peptide methionine sulfoxide reductase msrA/msrB K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D AYP1020_0668 msrA1; Peptide methionine sulfoxide reductase MsrA 1 K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D AYP1020_0741 msrA2; Peptide methionine sulfoxide reductase MsrA 2 K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D AYP1020_0740 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D AYP1020_1141 bcp; Putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AYP1020_0993 tpx; putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AYP1020_2147 ahpC; Alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D AYP1020_0171 Organic hydroperoxide resistance protein-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D AYP1020_1865 Organic hydroperoxide resistance protein-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D AYP1020_0386 hmp; Nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D AYP1020_1171 ftnA; Ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D AYP1020_1561 Ferredoxin--NADP reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D AYP1020_2012 arsC; Arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D AYP1020_1796 anaerobic ribonucleotide reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D AYP1020_0755 rlmL; Ribosomal RNA large subunit methyltransferase L K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D AYP1020_1553 paiA; Protease synthase and sporulation negative regulatory protein PAI 1 K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D AYP1020_1912 nat; Arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D AYP1020_1591 ytmI; putative N-acetyltransferase YtmI K00680 ytmI; uncharacterized N-acetyltransferase [EC:2.3.1.-]
D AYP1020_0152 yjaB; putative N-acetyltransferase YjaB K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D AYP1020_1014 acuA; Acetoin utilization protein AcuA K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-]
D AYP1020_1682 yncA; N-acyltransferase YncA K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D AYP1020_0768 epsD; Putative glycosyltransferase EpsD K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D AYP1020_2353 AIR carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D AYP1020_0127 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D AYP1020_0533 dihydroxyacetone kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D AYP1020_0861 yqfL_1; Putative pyruvate, phosphate dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D AYP1020_1783 yqfL_2; Putative pyruvate, phosphate dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D AYP1020_1738 thymidylate kinase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D AYP1020_1347 DNA integrity scanning protein DisA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D AYP1020_1363 putative uridylyltransferase K11442 K11442; putative uridylyltransferase [EC:2.7.7.-]
D AYP1020_0126 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D AYP1020_2272 Putative ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D AYP1020_0148 est_1; Carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D AYP1020_2177 est_2; Carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D AYP1020_0379 pbpX; Putative penicillin-binding protein PbpX K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103]
D AYP1020_1925 Lactonase drp35 K02352 drp35; lactonase [EC:3.1.1.-]
D AYP1020_1634 pnbA; Para-nitrobenzyl esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D AYP1020_1832 frmB; S-formylglutathione hydrolase FrmB K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D AYP1020_1964 S-formylglutathione hydrolase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D AYP1020_1704 acyl-CoA thioester hydrolase, YbgC/YbaW family K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AYP1020_0659 ybgC; Acyl-CoA thioester hydrolase YbgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AYP1020_1532 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AYP1020_0895 HAD phosphatase, family IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D AYP1020_2050 nrnA_2; Bifunctional oligoribonuclease and PAP phosphatase NrnA K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D AYP1020_2223 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AYP1020_2224 rnmV; Ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D AYP1020_0535 nuc; Thermonuclease precursor K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D AYP1020_0632 nucH; Thermonuclease precursor K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D AYP1020_0118 atl_1; Bifunctional autolysin precursor K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AYP1020_0354 Glycyl-glycine endopeptidase ALE-1 precursor K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AYP1020_2122 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AYP1020_2188 sle1_3; N-acetylmuramoyl-L-alanine amidase sle1 precursor K22409 sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AYP1020_0415 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AYP1020_0521 def1; Peptide deformylase 1 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AYP1020_1909 icaB; Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase precursor K21478 icaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
D AYP1020_2316 mshB; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D AYP1020_2229 yabJ; Enamine/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D AYP1020_1301 ptpB; Low molecular weight protein-tyrosine-phosphatase PtpB K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D AYP1020_1077 ydeN; Putative hydrolase YdeN K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D AYP1020_1750 putative metal-dependent hydrolase of the TIM-barrel fold protein K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52]
D AYP1020_1828 ipdC; Indole-3-pyruvate decarboxylase K27601 kdcA; branched-chain-2-oxoacid decarboxylase [EC:4.1.1.72]
D AYP1020_2057 nnrD; ADP-dependent (S)-NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D AYP1020_2354 NAD synthetase K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D AYP1020_2352 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D AYP1020_1696 capB; Capsule biosynthesis protein CapB K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-]
D AYP1020_1319 Metal-dependent amidase/aminoacylase/carboxypeptidase K27344 ldmS; L-aspartate-L-methionine ligase [EC:6.3.2.-]
D AYP1020_2001 copB; Copper-exporting P-type ATPase B K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D AYP1020_1015 acuC; Acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
D AYP1020_0485 bacillithiol biosynthesis cysteine-adding enzyme BshC K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D AYP1020_1455 formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D AYP1020_2158 fer; Ferredoxin K05337 fer; ferredoxin
D AYP1020_0791 Ferredoxin K05337 fer; ferredoxin
D AYP1020_0188 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D AYP1020_0716 nirQ; Denitrification regulatory protein NirQ K04748 norQ; nitric oxide reductase NorQ protein
D AYP1020_2344 merA; Mercuric reductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D AYP1020_0114 DegV domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D AYP1020_0742 DegV domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D AYP1020_0099 ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D AYP1020_0496 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D AYP1020_1910 icaC_2; Intercellular adhesion protein C K21462 icaC; probable poly-beta-1,6-N-acetyl-D-glucosamine export protein
C 99987 Cofactor metabolism
D AYP1020_1447 mobB; Molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D AYP1020_1646 abgT; PABA-GLU transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
D AYP1020_0718 mhqA; Putative ring-cleaving dioxygenase MhqA K15975 K15975; glyoxalase family protein
D AYP1020_0745 bacillithiol system oxidoreductase, YphP/YqiW family K26958 brxA_B; bacilliredoxin
D AYP1020_0813 bacillithiol system oxidoreductase, YphP/YqiW family K26958 brxA_B; bacilliredoxin
D AYP1020_0106 bacillithiol system protein YtxJ K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D AYP1020_0155 cspA_1; Cold shock protein CspA K03704 cspA; cold shock protein
D AYP1020_0709 cspA_2; Cold shock protein CspA K03704 cspA; cold shock protein
D AYP1020_0256 spxA; Regulatory protein spx K16509 spxA; regulatory protein spx
D AYP1020_1256 rps1; 30S ribosomal protein S1 K06959 tex; protein Tex
C 99974 Translation
D AYP1020_0225 yugI_1; General stress protein 13 K07570 GSP13; general stress protein 13
D AYP1020_2240 yugI_2; General stress protein 13 K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D AYP1020_2271 hypothetical protein K19411 mcsA; protein arginine kinase activator
D AYP1020_0958 tig; Trigger factor K03545 tig; trigger factor
D AYP1020_1465 ureE; Urease accessory protein UreE K03187 ureE; urease accessory protein
D AYP1020_1466 ureF; Urease accessory protein UreF K03188 ureF; urease accessory protein
D AYP1020_1467 ureG; Urease accessory protein UreG K03189 ureG; urease accessory protein
D AYP1020_1468 ureD1; Urease accessory protein UreD K03190 ureD; urease accessory protein
D AYP1020_0150 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D AYP1020_0257 mecA; Adapter protein MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D AYP1020_0944 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D AYP1020_2360 3-methyladenine DNA glycosylase K07457 K07457; endonuclease III related protein
D AYP1020_2220 GIY-YIG nuclease superfamily protein K07461 K07461; putative endonuclease
D AYP1020_0558 DNA protecting protein DprA K04096 smf; DNA processing protein
D AYP1020_0763 dnaD; DNA replication protein DnaD K02086 dnaD; DNA replication protein
D AYP1020_0322 Terminase small subunit K07474 xtmA; phage terminase small subunit
D AYP1020_0323 phage terminase, large subunit, PBSX family K06909 xtmB; phage terminase large subunit
D AYP1020_0177 ribonuclease M5 K07476 yusF; toprim domain protein
D AYP1020_0919 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D AYP1020_2030 Integrase core domain protein K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D AYP1020_2207 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D AYP1020_0641 lysP_1; Lysine-specific permease K03293 TC.AAT; amino acid transporter, AAT family
D AYP1020_1496 yifK; putative transport protein YifK K03293 TC.AAT; amino acid transporter, AAT family
D AYP1020_1772 yhdG_1; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D AYP1020_1436 swrC; Swarming motility protein SwrC K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D AYP1020_1800 citN; Citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D AYP1020_1794 betL; Glycine betaine-Na(+) symporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D AYP1020_0096 dtpT; Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D AYP1020_0030 pitA; Low-affinity inorganic phosphate transporter 1 K03306 TC.PIT; inorganic phosphate transporter, PiT family
D AYP1020_1813 yidK; putative symporter YidK K03307 TC.SSS; solute:Na+ symporter, SSS family
D AYP1020_2179 Na+-dependent transporters of the SNF family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D AYP1020_0664 alsT; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D AYP1020_1962 brnQ_2; Branched-chain amino acid transport system 2 carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D AYP1020_0714 brnQ_1; Branched-chain amino acid transport system 2 carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D AYP1020_1501 bile acid transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D AYP1020_1930 yflS; Putative malate transporter YflS K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D AYP1020_2236 ytgP_2; putative cell division protein YtgP K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D AYP1020_0902 kipI_2; Sporulation inhibitor KipI K06351 kipI; inhibitor of KinA
D AYP1020_2230 spoVG; Putative septation protein SpoVG K06412 spoVG; stage V sporulation protein G
C 99993 Cell motility
C 99995 Signaling proteins
D AYP1020_0433 typA; Tyrosine phosphorylated protein A K06207 typA; GTP-binding protein
D AYP1020_0869 ybeZ; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D AYP1020_1694 capA_1; Capsule biosynthesis protein CapA K07282 capA; gamma-polyglutamate biosynthesis protein CapA
D AYP1020_1695 capC; Capsule biosynthesis protein CapC K22116 capC; gamma-polyglutamate biosynthesis protein CapC
D AYP1020_2077 yknX; Putative efflux system component YknX K02005 ABC.CD.TX; HlyD family secretion protein
D AYP1020_2101 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D AYP1020_0954 cytochrome c-type biogenesis protein CcsB K02497 hemX; HemX protein
D AYP1020_1540 tcaA_1; Membrane-associated protein TcaA K21463 tcaA; membrane-associated protein TcaA
D AYP1020_1759 tcaA_2; Membrane-associated protein TcaA K21463 tcaA; membrane-associated protein TcaA
C 99994 Others
D AYP1020_0694 phoU; Repressor protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D AYP1020_0258 Competence protein K06198 coiA; competence protein CoiA
D AYP1020_1022 pheT_2; Phenylalanine--tRNA ligase beta subunit K06878 K06878; tRNA-binding protein
D AYP1020_0261 yjbI; Truncated BHb K06886 glbN; hemoglobin
D AYP1020_1873 ydfJ; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D AYP1020_2140 Patatin-like phospholipase K07001 K07001; NTE family protein
D AYP1020_2176 Patatin K07001 K07001; NTE family protein
D AYP1020_0483 yfnB; Putative HAD-hydrolase YfnB K07025 K07025; putative hydrolase of the HAD superfamily
D AYP1020_2129 yjjG; Pyrimidine 5'-nucleotidase YjjG K07025 K07025; putative hydrolase of the HAD superfamily
D AYP1020_2366 hdl_IVa; (S)-2-haloacid dehalogenase 4A K07025 K07025; putative hydrolase of the HAD superfamily
D AYP1020_0189 sufB_2; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D AYP1020_0186 sufB_1; FeS cluster assembly protein SufB K09015 sufD; Fe-S cluster assembly protein SufD
D AYP1020_1147 hypothetical protein K07038 K07038; inner membrane protein
D AYP1020_1364 ydjM; Inner membrane protein YdjM K07038 K07038; inner membrane protein
D AYP1020_1161 ribonuclease BN/unknown domain fusion protein K07058 K07058; membrane protein
D AYP1020_1926 putative rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D AYP1020_1756 3-demethylubiquinone-9 3-methyltransferase K04750 phnB; PhnB protein
D AYP1020_2164 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K04750 phnB; PhnB protein
D AYP1020_1255 SprT-like family protein K03095 sprL; SprT-like protein
D AYP1020_1861 hypothetical protein K01421 yhgE; putative membrane protein
D AYP1020_0184 hypothetical protein K08974 K08974; putative membrane protein
D AYP1020_0441 putative membrane protein K08976 K08976; putative membrane protein
D AYP1020_1266 Bacterial membrane flanked domain protein K08981 K08981; putative membrane protein
D AYP1020_1622 yagU; Inner membrane protein YagU K08996 yagU; putative membrane protein
C 99997 Function unknown
D AYP1020_2349 putative dGTPase K06885 K06885; uncharacterized protein
D AYP1020_0032 Inhibitor of apoptosis-promoting Bax1 K06890 K06890; uncharacterized protein
D AYP1020_1276 putative hydrolase K06950 K06950; uncharacterized protein
D AYP1020_2150 tcyP; Transporter of cystine TcyP K06956 K06956; uncharacterized protein
D AYP1020_2281 putative RNA-binding protein containing a PIN domain protein K06962 K06962; uncharacterized protein
D AYP1020_0770 Putative neutral zinc metallopeptidase K06973 K06973; uncharacterized protein
D AYP1020_1675 hypothetical protein K06975 K06975; uncharacterized protein
D AYP1020_1758 cocE; Cocaine esterase K06978 K06978; uncharacterized protein
D AYP1020_1742 putative lactoylglutathione lyase K07032 K07032; uncharacterized protein
D AYP1020_1105 putative membrane protein, putative toxin regulator K07035 K07035; uncharacterized protein
D AYP1020_1739 putative membrane protein, putative toxin regulator K07035 K07035; uncharacterized protein
D AYP1020_1747 putative metal-dependent hydrolase of the TIM-barrel fold protein K07045 K07045; uncharacterized protein
D AYP1020_1932 hypothetical protein K07069 K07069; uncharacterized protein
D AYP1020_0137 Epimerase family protein K07071 K07071; uncharacterized protein
D AYP1020_1940 KsdD-like steroid dehydrogenase K07077 K07077; uncharacterized protein
D AYP1020_1220 5,6-dimethylbenzimidazole synthase K07078 K07078; uncharacterized protein
D AYP1020_2003 putative permease K07089 K07089; uncharacterized protein
D AYP1020_1803 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D AYP1020_0193 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D AYP1020_0994 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D AYP1020_2028 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D AYP1020_0477 Putative metallophosphoesterase-like protein K07095 K07095; uncharacterized protein
D AYP1020_1232 putative inner membrane protein K07112 K07112; uncharacterized protein
D AYP1020_0949 membrane protein AbrB duplication K07120 K07120; uncharacterized protein
D AYP1020_0804 putative oxidoreductase K07124 K07124; uncharacterized protein
D AYP1020_1041 coproporphyrinogen III oxidase K07139 K07139; uncharacterized protein
D AYP1020_1933 putative membrane protein K07148 K07148; uncharacterized protein
D AYP1020_1066 Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D AYP1020_0038 hypothetical protein K09145 K09145; uncharacterized protein
D AYP1020_1265 Bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein
D AYP1020_1267 Bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein
D AYP1020_0037 hypothetical protein K09705 K09705; uncharacterized protein
D AYP1020_0798 hypothetical protein K09763 K09763; uncharacterized protein
D AYP1020_0049 hypothetical protein K09768 K09768; uncharacterized protein
D AYP1020_0545 putative DNA-binding protein K09787 K09787; uncharacterized protein
D AYP1020_0041 hypothetical protein K09793 K09793; uncharacterized protein
D AYP1020_0699 cvfB; Conserved virulence factor B K00243 K00243; uncharacterized protein
D AYP1020_2171 hypothetical protein K09822 K09822; uncharacterized protein
D AYP1020_1830 hypothetical protein K09940 K09940; uncharacterized protein
D AYP1020_1477 putative membrane protein K09940 K09940; uncharacterized protein
D AYP1020_1492 hypothetical protein K09963 K09963; uncharacterized protein
D AYP1020_0651 hypothetical protein K09976 K09976; uncharacterized protein
D AYP1020_1901 hypothetical protein K05937 K05937; uncharacterized protein
D AYP1020_0937 putative ribosomal protein K07584 ysxB; uncharacterized protein
D AYP1020_0029 Putative pit accessory protein K07220 K07220; uncharacterized protein
D AYP1020_1145 hypothetical protein K07586 ygaC; uncharacterized protein
D AYP1020_0576 hypothetical protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 30, 2024