+D GENES KO
#
KEGG Orthology (KO) - Streptococcus dysgalactiae subsp. equisimilis AC-2713
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:sdc00010]
D SDSE_1625 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDSE_2081 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDSE_1131 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDSE_0701 fbp; K04041 fructose-1,6-bisphosphatase III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SDSE_0348 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDSE_0670 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDSE_0316 tpiA; K01803 triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDSE_2024 plr; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SDSE_2022 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SDSE_1577 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_0203 K01834 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_0196 K01834 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_0745 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDSE_1130 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDSE_1921 ppdK; K01006 pyruvate,orthophosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D SDSE_1226 acoA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SDSE_1225 acoB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SDSE_1224 acoC; branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SDSE_1222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDSE_0948 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SDSE_0066 adhE; K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SDSE_0067 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SDSE_1075 manB; K01835 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_1598 K01840 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_1462 gapN; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D SDSE_0614 bglA; K01223 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SDSE_1738 bglA; K05350 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:sdc00020]
D SDSE_1222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDSE_1226 acoA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SDSE_1225 acoB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SDSE_1224 acoC; branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:sdc00030]
D SDSE_2081 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDSE_2033 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SDSE_1831 tkt; K00615 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SDSE_1832 tal; K00616 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SDSE_0269 K00616 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SDSE_1166 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SDSE_1082 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SDSE_1640 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D SDSE_1165 deoB; K01839 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SDSE_1075 manB; K01835 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_1598 K01840 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_0042 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SDSE_0920 prs; K00948 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SDSE_1443 dgoA; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SDSE_0693 kgdA; keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SDSE_1462 gapN; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D SDSE_1446 kdgK; K00874 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D SDSE_0692 kdgK; K00874 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D SDSE_0348 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDSE_0701 fbp; K04041 fructose-1,6-bisphosphatase III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SDSE_1131 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:sdc00040]
D SDSE_1441 uxaC; K01812 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D SDSE_1440 uxuA; K01686 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D SDSE_1445 uidA; K01195 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D SDSE_2071 hasC; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDSE_2106 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D SDSE_2105 K03082 hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SDSE_2104 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SDSE_2033 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:sdc00051]
D SDSE_1951 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SDSE_1950 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SDSE_1131 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDSE_0701 fbp; K04041 fructose-1,6-bisphosphatase III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SDSE_0852 fruB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SDSE_0348 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDSE_0670 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDSE_0316 tpiA; K01803 triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDSE_0853 fruA; K02768 PTS system, fructose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SDSE_0725 K02793 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SDSE_1192 K02793 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SDSE_1886 manL; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SDSE_1887 manM; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SDSE_0723 N-acetylgalactosamine permease IIC component 1 K02795 manY; mannose PTS system EIIC component
D SDSE_1190 ptsC; N-acetylgalactosamine permease IIC component 1 K02795 manY; mannose PTS system EIIC component
D SDSE_1888 manN; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D SDSE_0724 K02796 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D SDSE_1189 ptsD; Mannose permease IID component K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:sdc00052]
D SDSE_2071 hasC; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDSE_1075 manB; K01835 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_1598 K01840 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_1625 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDSE_1728 lacZ; K01190 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SDSE_0721 bgaC; K12308 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D SDSE_0311 K02773 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D SDSE_0313 K02774 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SDSE_0312 Galactitol permease IIC component K02775 gatC; galactitol PTS system EIIC component
D SDSE_1855 lacC; tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D SDSE_1131 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDSE_1854 tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SDSE_0719 tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SDSE_1856 lacB; galactose-6-phosphate isomerase subunit LacB K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SDSE_1857 lacA; galactose-6-phosphate isomerase subunit LacA K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SDSE_1953 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SDSE_1984 malZ; K01187 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SDSE_0689 agaF; K02744 PTS system,N-acetylgalactosamine-specific IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SDSE_0687 agaV; PTS system, N-acetylgalactosamine-specific IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D SDSE_0686 agaW; K02746 PTS system,N-acetylgalactosamine-specific IIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D SDSE_0685 agaD; PTS system, N-acetylgalactosamine-specific IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D SDSE_0718 agaS; galactosamine-6-phosphate deaminase (isomerizing) K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:sdc00053]
D SDSE_1445 uidA; K01195 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D SDSE_2107 K02821 PTS system, ascorbate-specific IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SDSE_0266 K02821 PTS system, ascorbate-specific IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SDSE_2108 K02822 PTS system, ascorbate-specific IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SDSE_0267 K02822 PTS system, ascorbate-specific IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SDSE_2109 ulaA; K03475 PTS system, ascorbate-specific IIC component K03475 ulaA; ascorbate PTS system EIIC component
D SDSE_0268 ulaA; Ascorbate-specific permease IIC component ulaA K03475 ulaA; ascorbate PTS system EIIC component
D SDSE_2101 K03476 L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D SDSE_2106 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D SDSE_2105 K03082 hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SDSE_2104 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:sdc00500]
D SDSE_1952 scrA; K02808 PTS system, sucrose-specific IIA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SDSE_1953 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SDSE_1984 malZ; K01187 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SDSE_2071 hasC; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDSE_0175 lacF; K02759 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SDSE_0176 K02760 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SDSE_0177 Lichenan permease IIC component K02761 celB; cellobiose PTS system EIIC component
D SDSE_0614 bglA; K01223 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SDSE_1738 bglA; K05350 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SDSE_0761 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SDSE_0762 glgD; K00975 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SDSE_0763 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D SDSE_0760 glgB; glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SDSE_1274 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SDSE_0759 pulA; pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D SDSE_0338 amyE; alpha-amylase precursor K01176 AMY; alpha-amylase [EC:3.2.1.1]
D SDSE_0576 amyS; K01176 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D SDSE_0337 amyE; alpha-amylase precursor K01176 AMY; alpha-amylase [EC:3.2.1.1]
D SDSE_1287 amyB; neopullulanase / cyclomaltodextrinase / maltogenic alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D SDSE_1275 malM; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D SDSE_0228 K02777 PTS system, glucose-specific IIA component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SDSE_0229 rgfB; K06896 K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D SDSE_2169 treP; K02817 PTS system, trehalose-specific IIA component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDSE_2168 dexS; K01226 trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D SDSE_1075 manB; K01835 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_1598 K01840 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_1625 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDSE_2081 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDSE_1951 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sdc00520]
D SDSE_1437 K01207 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SDSE_1845 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SDSE_1485 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D SDSE_1951 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SDSE_1128 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SDSE_1214 glmM; K03431 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SDSE_0504 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SDSE_1450 murZ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SDSE_0773 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SDSE_0901 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SDSE_2048 nanE; K01788 N-acylglucosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D SDSE_2042 nanH; N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D SDSE_1625 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDSE_1075 manB; K01835 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_1598 K01840 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_2071 hasC; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDSE_0725 K02793 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SDSE_1192 K02793 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SDSE_1886 manL; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SDSE_1887 manM; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SDSE_0723 N-acetylgalactosamine permease IIC component 1 K02795 manY; mannose PTS system EIIC component
D SDSE_1190 ptsC; N-acetylgalactosamine permease IIC component 1 K02795 manY; mannose PTS system EIIC component
D SDSE_1888 manN; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D SDSE_0724 K02796 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D SDSE_1189 ptsD; Mannose permease IID component K02796 manZ; mannose PTS system EIID component
D SDSE_2081 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDSE_1950 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SDSE_0761 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SDSE_0762 glgD; K00975 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:sdc00620]
D SDSE_1226 acoA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SDSE_1225 acoB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SDSE_1224 acoC; branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SDSE_1222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDSE_1982 pfl; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SDSE_0066 adhE; K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SDSE_0067 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SDSE_0143 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SDSE_0925 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDSE_1130 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDSE_1892 accD; acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SDSE_1896 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SDSE_1894 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SDSE_1893 accA; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SDSE_0426 K01512 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D SDSE_0948 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SDSE_1032 ddh; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D SDSE_0572 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SDSE_0480 glyoxalase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SDSE_0706 K01069 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SDSE_0909 K00028 malate dehydrogenase (decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D SDSE_1011 oadA; oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D SDSE_1028 K01571 oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D SDSE_1025 gcdB; K01605 methylmalonyl-CoA decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D SDSE_1018 oadB; K01605 methylmalonyl-CoA decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D SDSE_1027 hypothetical protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D SDSE_0658 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SDSE_1921 ppdK; K01006 pyruvate,orthophosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D SDSE_0591 fadA; K00626 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1795 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sdc00630]
D SDSE_0591 fadA; K00626 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1795 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_2264 K01091 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SDSE_2019 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SDSE_0941 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SDSE_1222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDSE_1443 dgoA; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SDSE_0693 kgdA; keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:sdc00640]
D SDSE_0143 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SDSE_0925 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDSE_1222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDSE_1982 pfl; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SDSE_1892 accD; acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SDSE_1896 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SDSE_1894 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SDSE_1893 accA; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SDSE_0948 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SDSE_0180 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:sdc00650]
D SDSE_0591 fadA; K00626 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1795 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1752 K07516 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SDSE_1796 atoD; acetate CoA-transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D SDSE_1797 atoA; acetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D SDSE_0066 adhE; K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SDSE_1025 gcdB; K01605 methylmalonyl-CoA decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D SDSE_1018 oadB; K01605 methylmalonyl-CoA decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D SDSE_1019 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SDSE_1026 K01606 methylmalonyl-CoA decarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SDSE_1177 gabD; K00135 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SDSE_1982 pfl; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SDSE_0880 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SDSE_1798 K00019 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism [PATH:sdc00562]
D SDSE_1097 IMP1; K01092 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SDSE_0502 Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D SDSE_0670 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDSE_0316 tpiA; K01803 triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:sdc00190]
D SDSE_0120 ndh; K03885 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SDSE_0121 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SDSE_0122 cydB; K00426 cytochrome bd-I oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SDSE_0768 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SDSE_0770 atpD; K02112 F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SDSE_0769 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SDSE_0767 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SDSE_0771 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SDSE_0765 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SDSE_0766 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SDSE_0764 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SDSE_0448 ppaC; putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:sdc00680]
D SDSE_0941 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SDSE_0745 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDSE_0658 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SDSE_0348 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDSE_0701 fbp; K04041 fructose-1,6-bisphosphatase III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SDSE_1131 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDSE_0143 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SDSE_0925 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDSE_1577 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_0203 K01834 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_0196 K01834 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_0475 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SDSE_0743 serB; K01079 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:sdc00910]
D SDSE_0863 gdh; K00262 glutamate dehydrogenase (NADP+) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SDSE_2019 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SDSE_1646 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SDSE_2063 K01673 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:sdc00920]
D SDSE_0730 Uncharacterized protein MG371 K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D SDSE_0272 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SDSE_1780 cysM; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:sdc00061]
D SDSE_1892 accD; acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SDSE_1896 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SDSE_1894 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SDSE_1893 accA; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SDSE_0045 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D SDSE_1901 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D SDSE_1899 fabD; acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SDSE_1902 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SDSE_1897 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SDSE_1898 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SDSE_0499 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SDSE_1895 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SDSE_1900 fabK; enoyl- K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SDSE_1749 K02371 enoyl- K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SDSE_1904 phaB; enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
D SDSE_0592 K01897 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:sdc00071]
D SDSE_0591 fadA; K00626 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1795 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1751 fadA; K00632 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SDSE_1752 K07516 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SDSE_0592 K01897 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SDSE_0066 adhE; K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SDSE_0067 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:sdc00561]
D SDSE_0585 dhaK; K05878 dihydroxyacetone kinase, N-terminal domain K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D SDSE_0586 dhaL; K05879 dihydroxyacetone kinase, C-terminal domain K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D SDSE_0587 hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D SDSE_0180 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D SDSE_1838 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SDSE_0044 plsX; putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SDSE_1149 K08591 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SDSE_1558 K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SDSE_0758 K07029 K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SDSE_0578 K03429 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D SDSE_0577 glycosyltransferase K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D SDSE_0812 Glycerol phosphate lipoteichoic acid synthase 1 K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:sdc00564]
D SDSE_2070 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SDSE_1837 glpD; alpha-glycerophosphate oxidase (glycerol-3-phosphateoxidase) (exported protein 6) K00105 E1.1.3.21; alpha-glycerophosphate oxidase [EC:1.1.3.21]
D SDSE_1149 K08591 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SDSE_1558 K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SDSE_0758 K07029 K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SDSE_0842 K01126 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SDSE_0251 cdsA; K00981 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SDSE_2269 pgsA; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SDSE_1058 cls; K06131 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D SDSE_1728 lacZ; K01190 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:sdc00592]
D SDSE_1751 fadA; K00632 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:sdc00230]
D SDSE_0505 K01515 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SDSE_1165 deoB; K01839 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SDSE_1075 manB; K01835 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_1598 K01840 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_0042 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SDSE_0920 prs; K00948 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SDSE_0048 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SDSE_0054 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SDSE_0050 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SDSE_0047 purL; K01952 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D SDSE_0049 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SDSE_0056 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SDSE_0055 purE; K01588 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SDSE_0046 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SDSE_0058 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SDSE_0052 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SDSE_1259 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SDSE_0865 K01081 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D SDSE_1163 punA; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SDSE_1162 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SDSE_0014 hpt; K00760 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SDSE_2276 guaB; K00088 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SDSE_1201 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SDSE_0433 K01516 nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SDSE_0932 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D SDSE_0986 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SDSE_0931 guaC; K00364 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D SDSE_1792 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SDSE_1466 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDSE_0494 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDSE_1467 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDSE_0492 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDSE_2179 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SDSE_0237 relA; K00951 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SDSE_0922 K07816 putative GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D SDSE_0170 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SDSE_0733 add; K01488 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D SDSE_0094 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SDSE_1646 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:sdc00240]
D SDSE_0836 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SDSE_0835 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SDSE_0834 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SDSE_1150 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SDSE_1579 pyrD; dihydroorotate dehydrogenase 1A K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D SDSE_1157 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SDSE_1158 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SDSE_0519 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SDSE_1201 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SDSE_0193 maf; Maf-like protein STH370 K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D SDSE_0341 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SDSE_0808 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SDSE_1269 K00876 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SDSE_1459 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SDSE_0865 K01081 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D SDSE_1178 5'-nucleotidase yjjG K25434 pynA; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D SDSE_0457 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SDSE_0832 pyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SDSE_1083 pdp; K00756 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D SDSE_1081 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SDSE_2179 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SDSE_1466 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDSE_0494 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDSE_1467 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDSE_0492 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDSE_1958 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SDSE_0468 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SDSE_2065 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SDSE_0936 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D SDSE_0881 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SDSE_0926 short chain dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:sdc00250]
D SDSE_1933 asnB; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SDSE_1645 asnA; K01914 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SDSE_0709 aspC; aspartate aminotransferase K22457 E2.6.1.14; asparagine---oxo-acid transaminase [EC:2.6.1.14]
D SDSE_1930 K10907 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SDSE_0170 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SDSE_0058 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SDSE_0834 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SDSE_1177 gabD; K00135 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SDSE_0863 gdh; K00262 glutamate dehydrogenase (NADP+) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SDSE_2019 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SDSE_0836 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SDSE_0835 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SDSE_1128 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SDSE_0048 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:sdc00260]
D SDSE_0330 lysC; K00928 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SDSE_1057 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SDSE_0894 hom; K00003 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SDSE_0895 thrB; K00872 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SDSE_0068 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SDSE_0941 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SDSE_1577 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_0203 K01834 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_0196 K01834 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_0475 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SDSE_0743 serB; K01079 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D SDSE_0926 short chain dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D SDSE_1222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDSE_2262 sdhB; K01752 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SDSE_2263 sdhA; L-serinedehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:sdc00270]
D SDSE_0272 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SDSE_1780 cysM; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SDSE_1451 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SDSE_1390 metK; K00789 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SDSE_0507 pfs; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SDSE_1456 GAF domain-containing protein A K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D SDSE_1322 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1517 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1407 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1408 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1386 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1800 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SDSE_0330 lysC; K00928 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SDSE_1057 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SDSE_0894 hom; K00003 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SDSE_1144 bcaT; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SDSE_0948 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SDSE_2262 sdhB; K01752 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SDSE_2263 sdhA; L-serinedehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SDSE_0475 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:sdc00280]
D SDSE_1144 bcaT; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SDSE_1222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDSE_1751 fadA; K00632 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SDSE_0591 fadA; K00626 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1795 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_0880 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:sdc00290]
D SDSE_1144 bcaT; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SDSE_1930 K10907 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00300 Lysine biosynthesis [PATH:sdc00300]
D SDSE_0894 hom; K00003 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SDSE_0330 lysC; K00928 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SDSE_1057 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SDSE_0400 dapE; K01439 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SDSE_1570 murF; K01929 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:sdc00310]
D SDSE_1222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDSE_0591 fadA; K00626 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1795 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1177 gabD; K00135 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SDSE_1796 atoD; acetate CoA-transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D SDSE_1797 atoA; acetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00220 Arginine biosynthesis [PATH:sdc00220]
D SDSE_1651 arcB; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SDSE_1653 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D SDSE_2019 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SDSE_0836 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SDSE_0835 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SDSE_1646 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SDSE_0863 gdh; K00262 glutamate dehydrogenase (NADP+) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SDSE_1930 K10907 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00330 Arginine and proline metabolism [PATH:sdc00330]
D SDSE_1154 amiC; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SDSE_0220 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SDSE_0147 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SDSE_1827 proB; K00931 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SDSE_1826 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:sdc00340]
D SDSE_2162 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D SDSE_2156 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D SDSE_2155 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D SDSE_2163 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D SDSE_2157 FTCD; K00603 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:sdc00350]
D SDSE_0066 adhE; K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SDSE_0067 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SDSE_1177 gabD; K00135 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism
D SDSE_1154 amiC; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SDSE_0220 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:sdc00380]
D SDSE_2143 nbaD; amidohydrolase 2 K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D SDSE_1222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDSE_0591 fadA; K00626 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1795 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1154 amiC; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SDSE_0220 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sdc00400]
D SDSE_1721 K03856 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SDSE_1722 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SDSE_0814 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D SDSE_1430 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SDSE_1431 aroA; K00800 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SDSE_0815 aroF; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SDSE_0218 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SDSE_0735 cm; K04516 chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:sdc00430]
D SDSE_0925 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDSE_0143 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:sdc00450]
D SDSE_0362 csdB; K11717 cysteine desulfurase / selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SDSE_1813 trxB; K00384 thioredoxin reductase (NADPH) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SDSE_0491 metS; K01874 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:sdc00460]
D SDSE_1933 asnB; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SDSE_1645 asnA; K01914 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SDSE_0941 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:sdc00470]
D SDSE_1947 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SDSE_1571 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SDSE_1292 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SDSE_1290 dltC; K03367 D-alanine-poly(phosphoribitol) ligase K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SDSE_0432 glr; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SDSE_1619 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
C 00480 Glutathione metabolism [PATH:sdc00480]
D SDSE_1089 pepN; K01256 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SDSE_1268 gst; K00799 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SDSE_0817 gor; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D SDSE_0656 bsaA; K00432 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:sdc00511]
D SDSE_1728 lacZ; K01190 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SDSE_1742 K01191 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:sdc00542]
D SDSE_0359 rgpG; undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:sdc00541]
D SDSE_2071 hasC; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDSE_1252 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SDSE_1250 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SDSE_1251 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SDSE_0792 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SDSE_1950 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SDSE_0504 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:sdc00550]
D SDSE_1450 murZ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SDSE_0773 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SDSE_0901 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SDSE_0421 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SDSE_1619 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SDSE_1571 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SDSE_1570 murF; K01929 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SDSE_0530 dgk; diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D SDSE_0250 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SDSE_0357 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SDSE_0443 Lipid phosphate phosphohydrolase 1 K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SDSE_1820 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SDSE_1618 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SDSE_1808 K05366 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SDSE_2130 pbp2; K12555 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SDSE_0366 dacA; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDSE_0892 D-alanyl-D-alanine serine-type carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDSE_1913 K07260 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SDSE_0454 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SDSE_1217 K01928 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelateligase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SDSE_1218 cobQ; Cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SDSE_0983 K05363 serine/alanine adding enzyme K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D SDSE_0678 murM; UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase / UDP-N-acetylmuramoylpentapeptide-lysine N(6)-seryltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D SDSE_0677 murN; K12554 alanine adding enzyme K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D SDSE_0131 K03693 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D SDSE_1573 ftsI; K00687 penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D SDSE_1821 pbpX; K12556 penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 00552 Teichoic acid biosynthesis [PATH:sdc00552]
D SDSE_0357 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SDSE_0443 Lipid phosphate phosphohydrolase 1 K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SDSE_0359 rgpG; undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SDSE_1292 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SDSE_1290 dltC; K03367 D-alanine-poly(phosphoribitol) ligase K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SDSE_1291 dltB; Protein dltB K03739 dltB; membrane protein involved in D-alanine export
D SDSE_1289 dltD; Protein dltD Flags: Precursor K03740 dltD; D-alanine transfer protein
D SDSE_1881 lytR; Biofilm regulatory protein A Flags: Precursor K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SDSE_1429 psr; Membrane-bound protein lytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SDSE_0812 Glycerol phosphate lipoteichoic acid synthase 1 K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D SDSE_0578 K03429 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:sdc00543]
D SDSE_0359 rgpG; undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SDSE_0272 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:sdc00730]
D SDSE_0821 nifS; K04487 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SDSE_0919 K04487 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SDSE_0822 thiI; Probable thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SDSE_2034 engC; K06949 ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SDSE_2032 K00949 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D SDSE_0094 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:sdc00740]
D SDSE_1885 Uncharacterized protein bbp_030 K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D SDSE_1100 ribC; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SDSE_1237 aphA; acid phosphatase/phosphotransferase K03788 aphA; acid phosphatase (class B) [EC:3.1.3.2]
D SDSE_0505 K01515 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:sdc00750]
D SDSE_1054 pdxK; K00868 pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SDSE_0332 thiD; phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SDSE_0475 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SDSE_0068 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:sdc00760]
D SDSE_1811 pncB; K00763 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SDSE_1163 punA; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SDSE_1162 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SDSE_0865 K01081 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D SDSE_0386 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SDSE_1810 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D SDSE_2125 nga; NAD glycohydrolase K18153 nga; NAD+ glycohydrolase [EC:3.2.2.5]
D SDSE_0923 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D SDSE_1177 gabD; K00135 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:sdc00770]
D SDSE_0850 apbA; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D SDSE_1085 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D SDSE_1072 dpfB; phosphopantothenate--cysteine ligase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D SDSE_1073 dfp; phosphopantothenoylcysteine decarboxylase K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]
D SDSE_1643 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SDSE_0560 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SDSE_1948 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SDSE_1144 bcaT; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:sdc00780]
D SDSE_1897 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SDSE_1898 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SDSE_0499 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SDSE_1895 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SDSE_0395 bioB; K01012 biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D SDSE_1453 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:sdc00785]
D SDSE_1071 K01932 K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D SDSE_1219 lplB; K03800 lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SDSE_1066 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SDSE_1222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDSE_1226 acoA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SDSE_1225 acoB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SDSE_1224 acoC; branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:sdc00790]
D SDSE_0897 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D SDSE_0899 folQ; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D SDSE_0900 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SDSE_0898 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SDSE_0882 dyr; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SDSE_0818 folylpolyglutamate synthase / dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SDSE_0896 folC; folylpolyglutamate synthase / dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SDSE_0219 pabB; K01665 para-aminobenzoate synthetase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
C 00670 One carbon pool by folate [PATH:sdc00670]
D SDSE_0882 dyr; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SDSE_1065 fhs; K01938 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SDSE_2159 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SDSE_1597 folD; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SDSE_2158 K01746 formiminotetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D SDSE_0941 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SDSE_0050 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SDSE_0052 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SDSE_2157 FTCD; K00603 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D SDSE_1789 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SDSE_0881 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SDSE_2074 K01934 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
D SDSE_1445 uidA; K01195 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sdc00130]
D SDSE_0119 ubiA; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D SDSE_1001 unnamed protein product K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D SDSE_1634 azoB; NAD(P)H azoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:sdc00900]
D SDSE_0126 ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SDSE_0591 fadA; K00626 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1795 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_0880 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SDSE_0879 mvaA; K00021 3-hydroxy-3-methylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D SDSE_0870 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D SDSE_0872 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D SDSE_0871 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D SDSE_0873 K01823 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D SDSE_1592 fps; dimethylallyltransferase / geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SDSE_0250 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:sdc00907]
D SDSE_1751 fadA; K00632 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SDSE_1831 tkt; K00615 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:sdc00523]
D SDSE_1252 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SDSE_1250 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SDSE_1251 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SDSE_0792 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D SDSE_1250 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D SDSE_1488 blaA; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:sdc00332]
D SDSE_1827 proB; K00931 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SDSE_1826 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:sdc00261]
D SDSE_0330 lysC; K00928 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SDSE_1057 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:sdc00521]
D SDSE_1625 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDSE_1075 manB; K01835 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_1598 K01840 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDSE_1097 IMP1; K01092 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SDSE_1252 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SDSE_1250 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SDSE_1251 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SDSE_0792 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SDSE_1625 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:sdc00525]
D SDSE_1252 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SDSE_1250 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D SDSE_0218 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SDSE_1899 fabD; acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SDSE_1898 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SDSE_0499 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SDSE_0045 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D SDSE_1901 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D SDSE_1451 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SDSE_1390 metK; K00789 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:sdc00362]
D SDSE_1751 fadA; K00632 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SDSE_2173 Uncharacterized protein yfiE K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SDSE_0935 Probable tautomerase spr0921 K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D SDSE_1752 K07516 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SDSE_1025 gcdB; K01605 methylmalonyl-CoA decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D SDSE_1018 oadB; K01605 methylmalonyl-CoA decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D SDSE_1019 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SDSE_1026 K01606 methylmalonyl-CoA decarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SDSE_0591 fadA; K00626 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1795 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:sdc00627]
D SDSE_1154 amiC; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SDSE_0220 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SDSE_0426 K01512 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D SDSE_1796 atoD; acetate CoA-transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D SDSE_1797 atoA; acetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:sdc00625]
D SDSE_0067 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SDSE_0066 adhE; K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D SDSE_2173 Uncharacterized protein yfiE K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:sdc00622]
D SDSE_2173 Uncharacterized protein yfiE K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SDSE_0935 Probable tautomerase spr0921 K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D SDSE_1751 fadA; K00632 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:sdc00643]
D SDSE_1154 amiC; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SDSE_0220 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SDSE_2173 Uncharacterized protein yfiE K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D SDSE_0935 Probable tautomerase spr0921 K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:sdc00626]
D SDSE_0067 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SDSE_0066 adhE; K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:sdc03020]
D SDSE_0132 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SDSE_0133 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SDSE_0099 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SDSE_1791 K03060 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SDSE_0340 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:sdc03010]
D SDSE_1140 rpsA; Polyribonucleotide nucleotidyltransferase K02945 RP-S1; small subunit ribosomal protein S1
D SDSE_2165 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SDSE_0079 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SDSE_2250 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SDSE_0090 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SDSE_1966 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SDSE_2026 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SDSE_0087 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SDSE_0288 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SDSE_0072 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SDSE_0098 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SDSE_2027 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SDSE_0097 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SDSE_2008 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SDSE_0086 rpsN; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D SDSE_0263 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SDSE_0843 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SDSE_0082 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SDSE_1964 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SDSE_0077 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SDSE_1086 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SDSE_0787 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SDSE_0516 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SDSE_0076 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SDSE_0073 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SDSE_0074 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SDSE_0085 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SDSE_0088 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SDSE_0891 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SDSE_2256 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SDSE_0890 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SDSE_0515 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SDSE_0287 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SDSE_0083 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SDSE_0092 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SDSE_0080 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SDSE_0100 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SDSE_0089 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SDSE_0737 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SDSE_0811 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SDSE_0825 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SDSE_0078 rplV; 50S ribosomal protein L22, chloroplastic K02890 RP-L22; large subunit ribosomal protein L22
D SDSE_0075 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SDSE_0084 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SDSE_0827 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SDSE_0349 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SDSE_0081 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SDSE_0091 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SDSE_0726 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D SDSE_2205 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SDSE_2206 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SDSE_0565 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SDSE_2129 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SDSE_2050 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SDSE_0810 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SDSE_0096 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SDSE_0020 16s_rRNA; rast_serv=119602.10.rna.1, 20646..22152, Small Subunit Ribosomal RNA; ssuRNA; see also GI:14268472 -published partial sequence K01977 16SrRNA; 16S ribosomal RNA
D SDSE_0322 16s_rRNA; rast_serv=119602.10.rna.39, 287987..289493, SSU rRNA; Best Blastn Hit: dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome; Good Blastn Hits: emb|AJ319644.1| Streptococcus dysgalactiae subsp. equisimilis partial 16S rRNA gene,strain AC-4436, see also emb|AJ314609.1| Streptococcus dysgalactiae subsp. equisimilis partial 16S rRNA gene,strain AC-2713 K01977 16SrRNA; 16S ribosomal RNA
D SDSE_1773 16s_rRNA; rast_serv=119602.10.rna.67, 1684578..1686084c,Small Subunit Ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDSE_0102 16s_rRNA; rast_serv=119602.10.rna.22, 80839..82346 K01977 16SrRNA; 16S ribosomal RNA
D SDSE_0373 16s_rRNA; rast_serv=119602.10.rna.46, 340644..342154, SSU rRNA; Best Blastn Hit: dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome; Good Blastn Hits: emb|AJ319644.1| Streptococcus dysgalactiae subsp. equisimilis partial 16S rRNA gene,strain AC-4436, see also emb|AJ314609.1| Streptococcus dysgalactiae subsp. equisimilis partial 16S rRNA gene,strain AC-2713 K01977 16SrRNA; 16S ribosomal RNA
D SDSE_0104 23s_rRNA; rast_serv=119602.10.rna.24, 82669..85572 K01980 23SrRNA; 23S ribosomal RNA
D SDSE_0375 23s_rRNA; rast_serv=119602.10.rna.48, 342477..345381, LSU rRNA; Best Blastn Hit:dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome K01980 23SrRNA; 23S ribosomal RNA
D SDSE_0324 23s_rRNA; rast_serv=119602.10.rna.41, 289816..292721, LSU rRNA; Best Blastn Hit:dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome K01980 23SrRNA; 23S ribosomal RNA
D SDSE_1771 23s_rRNA; rast_serv=119602.10.rna.65, 1681350..1684255c,Large Subunit Ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDSE_0022 23s_rRNA; rast_serv=119602.10.rna.3, 22475..25380, Large Subunit Ribosomal RNA; lsuRNA K01980 23SrRNA; 23S ribosomal RNA
D SDSE_0023 5s_rRNA; rast_serv=119602.10.rna.4, 25472..25588, 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SDSE_0105 5s_rRNA; rast_serv=119602.10.rna.25, 85664..85780 K01985 5SrRNA; 5S ribosomal RNA
D SDSE_1770 5s_rRNA; rast_serv=119602.10.rna.64, 1681142..1681258c, 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SDSE_0325 5s_rRNA; rast_serv=119602.10.rna.42, 292813..292929, 5S RNA; Best Blastn Hit:dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome K01985 5SrRNA; 5S ribosomal RNA
D SDSE_0376 5s_rRNA; rast_serv=119602.10.rna.49, 345473..345589, 5S RNA; Best Blastn Hit:dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:sdc00970]
D SDSE_0021 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDSE_0374 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDSE_0103 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDSE_0323 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDSE_1772 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDSE_2284 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDSE_0031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDSE_0327 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDSE_0378 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDSE_0738 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDSE_1139 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDSE_0326 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDSE_0377 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDSE_2281 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDSE_0025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SDSE_1768 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SDSE_2152 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SDSE_0116 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SDSE_1141 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SDSE_0109 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDSE_2282 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDSE_1763 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDSE_0029 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDSE_0038 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDSE_0107 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDSE_0115 tRNA-His K14226 tRNA-His; tRNA His
D SDSE_0039 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDSE_1764 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDSE_0108 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDSE_0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDSE_0347 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDSE_0117 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDSE_0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDSE_1766 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDSE_0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDSE_1767 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDSE_0216 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDSE_0036 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDSE_0111 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDSE_0033 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDSE_0034 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDSE_0037 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SDSE_0112 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SDSE_0032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SDSE_0110 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDSE_0035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDSE_0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDSE_1874 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDSE_0028 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDSE_1765 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDSE_1681 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDSE_0114 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SDSE_0113 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SDSE_1142 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SDSE_0024 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDSE_1769 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDSE_0106 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDSE_2058 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SDSE_1919 gatA; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SDSE_1918 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SDSE_1920 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SDSE_1473 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SDSE_2203 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SDSE_0710 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SDSE_1842 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SDSE_1841 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SDSE_0579 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SDSE_1891 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SDSE_0274 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SDSE_0491 metS; K01874 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SDSE_1789 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SDSE_1674 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SDSE_2110 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SDSE_1609 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SDSE_0643 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SDSE_2197 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SDSE_0253 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SDSE_2204 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SDSE_0776 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SDSE_0777 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SDSE_0130 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SDSE_2277 trsA; tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:sdc03060]
D SDSE_0093 secY; Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SDSE_2128 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SDSE_0566 secG; Probable protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D SDSE_0248 yajC; UPF0092 membrane protein BUsg_126 K03210 yajC; preprotein translocase subunit YajC
D SDSE_0425 oxaA; Membrane protein oxaA 2 Flags: Precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDSE_2053 Membrane protein oxaA 1 Flags: Precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDSE_1949 secA; Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SDSE_0990 ffh; Signal recognition particle 54 kDa protein 2 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SDSE_0610 ftsY; Signal recognition 54 kDa protein K03110 ftsY; fused signal recognition particle receptor
D SDSE_1978 spi; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SDSE_1129 sipC; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SDSE_0829 lsp; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:sdc04122]
D SDSE_0821 nifS; K04487 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SDSE_0919 K04487 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SDSE_2261 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SDSE_0822 thiI; Probable thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:sdc03018]
D SDSE_0745 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDSE_0270 pnp; K00962 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SDSE_0567 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SDSE_1562 rheA; K05592 ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SDSE_1793 2',3'-cyclic-nucleotide 2'-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SDSE_1230 K07021 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SDSE_2013 K12574 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SDSE_1131 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDSE_1908 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D SDSE_2138 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:sdc03030]
D SDSE_2001 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SDSE_1132 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDSE_0255 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SDSE_1455 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDSE_0469 dnaX; K02341 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDSE_1490 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDSE_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDSE_1427 dnaC; K02314 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SDSE_2255 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SDSE_0789 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SDSE_0153 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDSE_1965 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDSE_1040 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SDSE_1977 K03471 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SDSE_2097 polA; K02335 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDSE_0757 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:sdc03410]
D SDSE_1257 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SDSE_1151 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SDSE_1968 mutY; K03575 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SDSE_0559 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SDSE_2190 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SDSE_0481 exoA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SDSE_2097 polA; K02335 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDSE_1260 recJ; K07462 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SDSE_0757 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:sdc03420]
D SDSE_0007 mfd; K03723 transcription-repair coupling factor (superfamily II helicase) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SDSE_1960 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D SDSE_1294 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D SDSE_1175 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SDSE_1117 pcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SDSE_2097 polA; K02335 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDSE_0757 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:sdc03430]
D SDSE_2194 mutS; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D SDSE_1974 DNA mismatch repair protein mutS K07456 mutS2; DNA mismatch repair protein MutS2
D SDSE_2193 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D SDSE_1117 pcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SDSE_1594 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SDSE_1593 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SDSE_1260 recJ; K07462 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SDSE_0153 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDSE_1965 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDSE_1132 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDSE_0255 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SDSE_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDSE_1455 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDSE_1490 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDSE_0469 dnaX; K02341 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDSE_2001 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SDSE_0757 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:sdc03440]
D SDSE_1260 recJ; K07462 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SDSE_0153 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDSE_1965 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDSE_2274 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D SDSE_0043 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D SDSE_1572 recR; Recombination protein recR K06187 recR; recombination protein RecR
D SDSE_2187 recA; recombinase A K03553 recA; recombination protein RecA
D SDSE_2097 polA; K02335 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDSE_2191 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D SDSE_0061 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SDSE_1935 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SDSE_1979 recD; K03581 exodeoxyribonuclease V alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SDSE_1132 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDSE_0255 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SDSE_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDSE_1455 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDSE_1490 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDSE_0469 dnaX; K02341 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDSE_2001 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SDSE_1790 priA; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:sdc03250]
D SDSE_0512 cypB; K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:sdc02010]
D SDSE_1186 Uncharacterized protein HI0131 Flags: Precursor K02012 afuA; iron(III) transport system substrate-binding protein
D SDSE_0905 potD; Putrescine-binding periplasmic protein Flags: Precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SDSE_0904 potC; Spermidine/putrescine transport system permease protein potC K11070 potC; spermidine/putrescine transport system permease protein
D SDSE_0903 potB; Putrescine transport system permease protein potH K11071 potB; spermidine/putrescine transport system permease protein
D SDSE_0902 potA; K11072 spermidine/putrescine transport system ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SDSE_2098 Glycine betaine-binding periplasmic protein Flags: Precursor K02001 proW; glycine betaine/proline transport system permease protein
D SDSE_2099 proV; K02000 glycine betaine/proline transport system ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D SDSE_0930 proW; Choline-binding protein Flags: Precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D SDSE_0929 proV; Phosphate import ATP-binding protein pstB K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SDSE_0241 msmK; Multiple sugar-binding transport ATP-binding protein msmK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SDSE_1288 malX; Maltose/maltodextrin-binding protein Flags: Precursor K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SDSE_1278 malE; Maltotriose-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SDSE_1279 malF; Maltodextrin transport system permease protein malC K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SDSE_1286 malC; Maltodextrin transport system permease protein malC K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SDSE_1280 malG; Probable ABC transporter permease protein yurM K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SDSE_1284 malD; Maltose transport system permease protein malG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SDSE_1732 Lipoprotein lplA Flags: Precursor K17318 lplA; putative aldouronate transport system substrate-binding protein
D SDSE_1985 Lipoprotein lplA Flags: Precursor K17318 lplA; putative aldouronate transport system substrate-binding protein
D SDSE_1734 malF; Maltose transport system permease protein malF K17319 lplB; putative aldouronate transport system permease protein
D SDSE_1988 Protein lplB K17319 lplB; putative aldouronate transport system permease protein
D SDSE_1733 Protein lplC K17320 lplC; putative aldouronate transport system permease protein
D SDSE_1987 Probable ABC transporter permease protein ytcP K17320 lplC; putative aldouronate transport system permease protein
D SDSE_0171 CD4+ T-cell-stimulating antigen Flags: Precursor K07335 bmpA; basic membrane protein A and related proteins
D SDSE_1080 Basic membrane protein A2 K07335 bmpA; basic membrane protein A and related proteins
D SDSE_1078 Uncharacterized protein MG120 homolog K23535 nupB; general nucleoside transport system permease protein
D SDSE_1077 Uncharacterized protein MG120 homolog K23536 nupC; general nucleoside transport system permease protein
D SDSE_1079 K02056 simple sugar transport system ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SDSE_1636 rbsB; HTH-type transcriptional repressor purR K10439 rbsB; ribose transport system substrate-binding protein
D SDSE_1637 lsrC; Autoinducer 2 import system permease protein lsrC K10440 rbsC; ribose transport system permease protein
D SDSE_1638 rbsA; K10441 ribose transport system ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SDSE_1639 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D SDSE_0621 pstS; Phosphate-binding protein pstS 2 K02040 pstS; phosphate transport system substrate-binding protein
D SDSE_1095 pstS; Phosphate-binding protein pstS 1 K02040 pstS; phosphate transport system substrate-binding protein
D SDSE_0622 pstC; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein
D SDSE_1094 pstC; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein
D SDSE_0623 Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D SDSE_1093 pstA; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D SDSE_0624 pstB; phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SDSE_1091 pstB; K02036 phosphate transport system ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SDSE_1092 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SDSE_1295 gnlP; Membrane-bound lytic murein transglycosylase F K10036 glnH; glutamine transport system substrate-binding protein
D SDSE_1296 glnQ; K02028 polar amino acid transport system ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SDSE_0596 Membrane-bound lytic murein transglycosylase F K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D SDSE_0594 glnP; Inner membrane amino-acid ABC transporter permease protein yecS K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SDSE_0595 L-cystine transport system permease protein tcyB K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SDSE_0597 glnQ; K10041 putative glutamine transport system ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SDSE_1153 Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D SDSE_1817 Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D SDSE_0397 atmA; Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D SDSE_1152 Probable amino-acid ABC transporter permease protein yckA K10009 tcyB; L-cystine transport system permease protein
D SDSE_1816 Inner membrane amino-acid ABC transporter permease protein yecS K10009 tcyB; L-cystine transport system permease protein
D SDSE_1815 K02028 polar amino acid transport system ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SDSE_0786 Membrane-bound lytic murein transglycosylase F K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SDSE_1604 occM; Octopine transport system permease protein occM K17077 artQ; arginine/lysine/histidine transport system permease protein
D SDSE_1603 artP; K02028 polar amino acid transport system ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D SDSE_0355 Inner membrane amino-acid ABC transporter permease protein yhdY K17073 lysX1; putative lysine transport system substrate-binding protein
D SDSE_0354 K02028 polar amino acid transport system ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D SDSE_0462 livK; Leu/Ile/Val-binding protein homolog 2 Flags: Precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SDSE_0463 livH; Autoinducer 2 import system permease protein lsrC K01997 livH; branched-chain amino acid transport system permease protein
D SDSE_0464 livM; Autoinducer 2 import system permease protein lsrC K01998 livM; branched-chain amino acid transport system permease protein
D SDSE_0465 livG; Sulfate/thiosulfate import ATP-binding protein cysA K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SDSE_0466 livF; Spermidine/putrescine import ATP-binding protein potA K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SDSE_0398 atmB; D-methionine-binding lipoprotein metQ Flags: Precursor K02073 metQ; D-methionine transport system substrate-binding protein
D SDSE_0399 atmB; D-methionine-binding lipoprotein metQ Flags: Precursor K02073 metQ; D-methionine transport system substrate-binding protein
D SDSE_1313 D-methionine-binding lipoprotein metQ Flags: Precursor K02073 metQ; D-methionine transport system substrate-binding protein
D SDSE_1563 D-methionine-binding lipoprotein metQ Flags: Precursor K02073 metQ; D-methionine transport system substrate-binding protein
D SDSE_0402 metI; D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D SDSE_1564 metI; Probable D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D SDSE_0401 atmD; Methionine import ATP-binding protein metN K02071 metN; D-methionine transport system ATP-binding protein
D SDSE_1565 Methionine import ATP-binding protein metN K02071 metN; D-methionine transport system ATP-binding protein
D SDSE_2018 oppA; Periplasmic oligopeptide-binding protein Flags: Precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D SDSE_0367 oppA; Oligopeptide-binding protein aliB Flags: Precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D SDSE_2017 oppB; Putative oligopeptide transport system permease protein oppB2 K15581 oppB; oligopeptide transport system permease protein
D SDSE_0368 oppB; Oligopeptide transport system permease protein amiC K15581 oppB; oligopeptide transport system permease protein
D SDSE_2016 oppC; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D SDSE_0369 dppC; Dipeptide transport system permease protein dppC K15582 oppC; oligopeptide transport system permease protein
D SDSE_2015 oppD; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SDSE_0370 oppD; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SDSE_2014 oppF; Oligopeptide transport ATP-binding protein oppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SDSE_0371 oppF; Oligopeptide transport ATP-binding protein amiF K10823 oppF; oligopeptide transport system ATP-binding protein
D SDSE_0974 psaA; Manganese ABC transporter substrate-binding lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D SDSE_0716 adcA; Zinc-binding protein adcA Flags: Precursor K09815 znuA; zinc transport system substrate-binding protein
D SDSE_0129 adcB; Manganese transport system membrane protein mntC K09816 znuB; zinc transport system permease protein
D SDSE_0128 adcC; K09817 zinc transport system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SDSE_0509 ssaB; Manganese ABC transporter substrate-binding lipoprotein K11704 mtsA; iron/zinc/manganese/copper transport system substrate-binding protein
D SDSE_0511 mtsC; 29 kDa membrane protein in scaA 5'region K11705 mtsC; iron/zinc/manganese/copper transport system permease protein
D SDSE_0510 mtsB; Phosphate import ATP-binding protein pstB K11706 mtsB; iron/zinc/manganese/copper transport system ATP-binding protein
D SDSE_2089 bioY; Probable biotin transporter bioY K03523 bioY; biotin transport system substrate-specific component
D SDSE_2266 cbiQ; Putative ABC transporter ATP-binding protein BL0043 K16785 ecfT; energy-coupling factor transport system permease protein
D SDSE_1332 K02008 cobalt/nickel transport system permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D SDSE_1937 Transmembrane component BL0694 of energizing module of predicted K16785 ecfT; energy-coupling factor transport system permease protein
D SDSE_2268 cbiO; Cobalt import ATP-binding protein cbiO 2 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDSE_2267 cbiO; Cobalt import ATP-binding protein cbiO 1 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDSE_1006 bceB; ABC transporter permease protein yxdM K19084 braE; bacitracin transport system permease protein
D SDSE_1007 Methionine import ATP-binding protein metN K19083 braD; bacitracin transport system ATP-binding protein
D SDSE_0705 ftsX; Macrolide export ATP-binding/permease protein macB K09811 ftsX; cell division transport system permease protein
D SDSE_0704 ftsE; Methionine import ATP-binding protein metN K09812 ftsE; cell division transport system ATP-binding protein
D SDSE_1335 Lipid A export ATP-binding/permease protein msbA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D SDSE_1334 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D SDSE_1630 Lipid A export ATP-binding/permease protein msbA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_1629 Putative ABC transporter ATP-binding protein exp8 K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_2068 Lipid A export ATP-binding/permease protein msbA K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_2067 Lipid A export ATP-binding/permease protein msbA K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_0868 Lipid A export ATP-binding/permease protein msbA K18216 steA; ATP-binding cassette, subfamily B, tetracycline resistant protein
D SDSE_0869 Lipid A export ATP-binding/permease protein msbA K18217 steB; ATP-binding cassette, subfamily B, tetracycline resistant protein
D SDSE_0861 Lipid A export ATP-binding/permease protein msbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_0944 Lipid A export ATP-binding/permease protein msbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_0862 Lipid A export ATP-binding/permease protein msbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_0945 Lipid A export ATP-binding/permease protein msbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_0546 comA; K12292 ATP-binding cassette, subfamily C,bacterial, competence factor transporting protein K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SDSE_0533 blpA; K06148 ATP-binding cassette, subfamily C,bacterial K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SDSE_0124 cydC; Lipid A export ATP-binding/permease protein msbA K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SDSE_0123 cydD; Lipid A export ATP-binding/permease protein msbA K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D SDSE_2198 msrA; Spermidine/putrescine import ATP-binding protein potA K18231 msr; macrolide transport system ATP-binding/permease protein
D SDSE_1551 Ribose import ATP-binding protein rbsA K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:sdc02060]
D SDSE_1463 ptsI; K08483 phosphotransferase system, enzyme I,PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SDSE_1464 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D SDSE_0228 K02777 PTS system, glucose-specific IIA component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SDSE_1952 scrA; K02808 PTS system, sucrose-specific IIA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SDSE_0613 K02755 PTS system, beta-glucosides-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SDSE_2169 treP; K02817 PTS system, trehalose-specific IIA component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDSE_0175 lacF; K02759 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SDSE_0176 K02760 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SDSE_0177 Lichenan permease IIC component K02761 celB; cellobiose PTS system EIIC component
D SDSE_0725 K02793 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SDSE_1192 K02793 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SDSE_1886 manL; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SDSE_1887 manM; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SDSE_0723 N-acetylgalactosamine permease IIC component 1 K02795 manY; mannose PTS system EIIC component
D SDSE_1190 ptsC; N-acetylgalactosamine permease IIC component 1 K02795 manY; mannose PTS system EIIC component
D SDSE_1888 manN; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D SDSE_0724 K02796 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D SDSE_1189 ptsD; Mannose permease IID component K02796 manZ; mannose PTS system EIID component
D SDSE_1191 ptsB; K02794 PTS system, mannose-specific IIB component K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D SDSE_0689 agaF; K02744 PTS system,N-acetylgalactosamine-specific IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SDSE_0687 agaV; PTS system, N-acetylgalactosamine-specific IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D SDSE_0686 agaW; K02746 PTS system,N-acetylgalactosamine-specific IIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D SDSE_0685 agaD; PTS system, N-acetylgalactosamine-specific IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D SDSE_0311 K02773 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D SDSE_0313 K02774 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SDSE_0312 Galactitol permease IIC component K02775 gatC; galactitol PTS system EIIC component
D SDSE_1861 K02773 PTS system, galactitol-specific IIA component K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SDSE_1860 K02774 PTS system, galactitol-specific IIB component K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D SDSE_1859 K02775 PTS system, galactitol-specific IIC component K20114 gatC; galactose PTS system EIIC component
D SDSE_2107 K02821 PTS system, ascorbate-specific IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SDSE_0266 K02821 PTS system, ascorbate-specific IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SDSE_2108 K02822 PTS system, ascorbate-specific IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SDSE_0267 K02822 PTS system, ascorbate-specific IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SDSE_2109 ulaA; K03475 PTS system, ascorbate-specific IIC component K03475 ulaA; ascorbate PTS system EIIC component
D SDSE_0268 ulaA; Ascorbate-specific permease IIC component ulaA K03475 ulaA; ascorbate PTS system EIIC component
D SDSE_0853 fruA; K02768 PTS system, fructose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SDSE_0852 fruB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:sdc03070]
D SDSE_2128 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SDSE_0566 secG; Probable protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D SDSE_0093 secY; Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SDSE_0248 yajC; UPF0092 membrane protein BUsg_126 K03210 yajC; preprotein translocase subunit YajC
D SDSE_0425 oxaA; Membrane protein oxaA 2 Flags: Precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDSE_2053 Membrane protein oxaA 1 Flags: Precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDSE_1949 secA; Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SDSE_0610 ftsY; Signal recognition 54 kDa protein K03110 ftsY; fused signal recognition particle receptor
D SDSE_0990 ffh; Signal recognition particle 54 kDa protein 2 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SDSE_1354 Protein virD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:sdc02020]
D SDSE_0620 pnpS; K07636 two-component system, OmpR family,phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SDSE_0619 phoP; Probable transcriptional regulator ycf27 K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SDSE_0621 pstS; Phosphate-binding protein pstS 2 K02040 pstS; phosphate transport system substrate-binding protein
D SDSE_1095 pstS; Phosphate-binding protein pstS 1 K02040 pstS; phosphate transport system substrate-binding protein
D SDSE_2286 htrA; K01362 K04771 degP; serine protease Do [EC:3.4.21.107]
D SDSE_0599 vicK; two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SDSE_0598 vicR; Transcriptional regulatory protein yycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D SDSE_0001 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D SDSE_1006 bceB; ABC transporter permease protein yxdM K19084 braE; bacitracin transport system permease protein
D SDSE_1007 Methionine import ATP-binding protein metN K19083 braD; bacitracin transport system ATP-binding protein
D SDSE_1004 bceS; sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SDSE_1005 bceR; Probable transcriptional regulator ycf27 K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D SDSE_1292 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SDSE_1291 dltB; Protein dltB K03739 dltB; membrane protein involved in D-alanine export
D SDSE_1290 dltC; K03367 D-alanine-poly(phosphoribitol) ligase K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SDSE_1289 dltD; Protein dltD Flags: Precursor K03740 dltD; D-alanine transfer protein
D SDSE_1087 ciaH; sensor protein CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SDSE_1088 ciaR; Response regulator mprA K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SDSE_1913 K07260 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SDSE_0413 covS; sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D SDSE_0412 covR; Probable transcriptional regulator ycf27 K18941 arlR; two-component system, OmpR family, response regulator ArlR
D SDSE_0967 ihk; two-component system histidine kinase K18986 ihk; two-component system, OmpR family, sensor kinase Ihk [EC:2.7.13.3]
D SDSE_0966 irr; Probable transcriptional regulator ycf27 K18987 irr; two-component system, OmpR family, response regulator Irr
D SDSE_1010 citC; (citrate (pro-3S)-lyase) ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D SDSE_1016 citD; citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D SDSE_1015 citE; citrate lyase beta chain / citryl-CoA lyase subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D SDSE_1014 citF; K01643 citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D SDSE_1013 citX; 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D SDSE_1023 citG; K05966 triphosphoribosyl-dephospho-CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D SDSE_0909 K00028 malate dehydrogenase (decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D SDSE_0908 malP; Citrate-sodium symporter K11616 maeN; malate:Na+ symporter
D SDSE_0342 lytS; K07704 two-component system, LytT family, sensor histidine kinase LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D SDSE_0343 lytT; Sensory transduction protein lytT K07705 lytT; two-component system, LytTR family, response regulator LytT
D SDSE_0344 lrgA; UPF0299 membrane protein YE2790 K05338 lrgA; holin-like protein
D SDSE_0345 lrgB; Antiholin-like protein lrgB K05339 lrgB; holin-like protein LrgB
D SDSE_2057 fasB; K07706 two-component system, AgrA family, sensor histidine kinase AgrC K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_0542 comD; K07706 two-component system, AgrA family, sensor histidine kinase AgrC K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_1737 rocA; K07706 two-component system, AgrA family, sensor histidine kinase AgrC K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_2056 fasC; sensory transduction protein kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_2055 fasA; Accessory gene regulator A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SDSE_0541 comE; Uncharacterized response regulatory protein ypdB K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SDSE_0380 competence-specific sigma factor K12296 comX1_2; competence protein ComX
D SDSE_0328 putative competence protein ComX1 K12296 comX1_2; competence protein ComX
D SDSE_0012 K01467 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SDSE_1784 yvqE; K00936 K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SDSE_1783 yvqC; Transcriptional regulatory protein liaR K11618 liaR; two-component system, NarL family, response regulator LiaR
D SDSE_1785 yvqF; Protein liaF K11622 liaF; lia operon protein LiaF
D SDSE_0301 salK; K00936 K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK
D SDSE_0302 salR; Transcriptional regulatory protein degU K14989 salR; two-component system, NarL family, secretion system response regulator SalR
D SDSE_2019 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SDSE_1796 atoD; acetate CoA-transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D SDSE_1797 atoA; acetate CoA-transferase beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D SDSE_0591 fadA; K00626 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1795 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1730 yesM; K07718 two-component system, sensor histidine kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SDSE_1658 yesM; K07718 two-component system, sensor histidine kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SDSE_1729 yesN; Chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D SDSE_1187 yesN; Uncharacterized response regulatory protein SERP2406 K07720 yesN; two-component system, response regulator YesN
D SDSE_1659 yesN; Uncharacterized response regulatory protein SAR0214 K07720 yesN; two-component system, response regulator YesN
D SDSE_0121 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SDSE_0122 cydB; K00426 cytochrome bd-I oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SDSE_0062 ACP1; K01104 protein-tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:sdc02024]
D SDSE_1800 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SDSE_0218 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SDSE_0462 livK; Leu/Ile/Val-binding protein homolog 2 Flags: Precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SDSE_0463 livH; Autoinducer 2 import system permease protein lsrC K01997 livH; branched-chain amino acid transport system permease protein
D SDSE_0464 livM; Autoinducer 2 import system permease protein lsrC K01998 livM; branched-chain amino acid transport system permease protein
D SDSE_0465 livG; Sulfate/thiosulfate import ATP-binding protein cysA K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SDSE_0466 livF; Spermidine/putrescine import ATP-binding protein potA K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SDSE_0592 K01897 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SDSE_2057 fasB; K07706 two-component system, AgrA family, sensor histidine kinase AgrC K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_0542 comD; K07706 two-component system, AgrA family, sensor histidine kinase AgrC K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_1737 rocA; K07706 two-component system, AgrA family, sensor histidine kinase AgrC K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_2056 fasC; sensory transduction protein kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_2055 fasA; Accessory gene regulator A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SDSE_0541 comE; Uncharacterized response regulatory protein ypdB K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SDSE_2123 slo; Streptolysin O K11031 slo; thiol-activated cytolysin
D SDSE_1087 ciaH; sensor protein CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SDSE_1088 ciaR; Response regulator mprA K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SDSE_2018 oppA; Periplasmic oligopeptide-binding protein Flags: Precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D SDSE_0367 oppA; Oligopeptide-binding protein aliB Flags: Precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D SDSE_2017 oppB; Putative oligopeptide transport system permease protein oppB2 K15581 oppB; oligopeptide transport system permease protein
D SDSE_0368 oppB; Oligopeptide transport system permease protein amiC K15581 oppB; oligopeptide transport system permease protein
D SDSE_2016 oppC; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D SDSE_0369 dppC; Dipeptide transport system permease protein dppC K15582 oppC; oligopeptide transport system permease protein
D SDSE_2015 oppD; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SDSE_0370 oppD; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SDSE_2014 oppF; Oligopeptide transport ATP-binding protein oppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SDSE_0371 oppF; Oligopeptide transport ATP-binding protein amiF K10823 oppF; oligopeptide transport system ATP-binding protein
D SDSE_0059 transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D SDSE_0380 competence-specific sigma factor K12296 comX1_2; competence protein ComX
D SDSE_0328 putative competence protein ComX1 K12296 comX1_2; competence protein ComX
D SDSE_0546 comA; K12292 ATP-binding cassette, subfamily C,bacterial, competence factor transporting protein K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SDSE_0533 blpA; K06148 ATP-binding cassette, subfamily C,bacterial K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SDSE_0544 silD; Transport protein comB K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D SDSE_0557 mutR; HTH-type transcriptional regulator rgg K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D SDSE_1582 rggC; HTH-type transcriptional regulator rgg K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D SDSE_0981 dppA; Glutathione-binding protein gsiB Flags: Precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SDSE_0980 dppB; Putative peptide permease protein BOV_A0351 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SDSE_0979 dppC; Oligopeptide transport system permease protein appC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SDSE_0978 dppD; Phosphate import ATP-binding protein pstB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SDSE_0977 dppE; Sulfate/thiosulfate import ATP-binding protein cysA K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SDSE_1854 tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SDSE_0719 tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SDSE_0425 oxaA; Membrane protein oxaA 2 Flags: Precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDSE_2053 Membrane protein oxaA 1 Flags: Precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDSE_2128 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SDSE_0566 secG; Probable protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D SDSE_0093 secY; Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SDSE_0248 yajC; UPF0092 membrane protein BUsg_126 K03210 yajC; preprotein translocase subunit YajC
D SDSE_1949 secA; Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SDSE_0610 ftsY; Signal recognition 54 kDa protein K03110 ftsY; fused signal recognition particle receptor
D SDSE_0990 ffh; Signal recognition particle 54 kDa protein 2 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D SDSE_1636 rbsB; HTH-type transcriptional repressor purR K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:sdc02040]
D SDSE_1153 Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D SDSE_1817 Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D SDSE_0397 atmA; Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D SDSE_0790 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SDSE_0745 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
D SDSE_2075 fnz; Muscle M-line assembly protein unc-89 K13734 sfb1; fibronectin-binding protein 1
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:sdc01501]
D SDSE_1437 K01207 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SDSE_0012 K01467 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SDSE_2018 oppA; Periplasmic oligopeptide-binding protein Flags: Precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D SDSE_0367 oppA; Oligopeptide-binding protein aliB Flags: Precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D SDSE_2017 oppB; Putative oligopeptide transport system permease protein oppB2 K15581 oppB; oligopeptide transport system permease protein
D SDSE_0368 oppB; Oligopeptide transport system permease protein amiC K15581 oppB; oligopeptide transport system permease protein
D SDSE_2016 oppC; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D SDSE_0369 dppC; Dipeptide transport system permease protein dppC K15582 oppC; oligopeptide transport system permease protein
D SDSE_2015 oppD; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SDSE_0370 oppD; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SDSE_2014 oppF; Oligopeptide transport ATP-binding protein oppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SDSE_0371 oppF; Oligopeptide transport ATP-binding protein amiF K10823 oppF; oligopeptide transport system ATP-binding protein
D SDSE_1488 blaA; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SDSE_1808 K05366 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SDSE_0131 K03693 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D SDSE_2130 pbp2; K12555 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SDSE_1573 ftsI; K00687 penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D SDSE_1821 pbpX; K12556 penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 01502 Vancomycin resistance [PATH:sdc01502]
D SDSE_1571 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SDSE_1947 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SDSE_1570 murF; K01929 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SDSE_1820 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SDSE_1618 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SDSE_1913 K07260 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:sdc01503]
D SDSE_2286 htrA; K01362 K04771 degP; serine protease Do [EC:3.4.21.107]
D SDSE_0512 cypB; K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SDSE_1292 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SDSE_1291 dltB; Protein dltB K03739 dltB; membrane protein involved in D-alanine export
D SDSE_1290 dltC; K03367 D-alanine-poly(phosphoribitol) ligase K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SDSE_1289 dltD; Protein dltD Flags: Precursor K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:sdc01000]
C 01001 Protein kinases [BR:sdc01001]
D SDSE_1786 pknB; K08884 serine/threonine protein kinase,bacterial K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D SDSE_0620 pnpS; K07636 two-component system, OmpR family,phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SDSE_0599 vicK; two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SDSE_1004 bceS; sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SDSE_1087 ciaH; sensor protein CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SDSE_0413 covS; sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D SDSE_0967 ihk; two-component system histidine kinase K18986 ihk; two-component system, OmpR family, sensor kinase Ihk [EC:2.7.13.3]
D SDSE_1784 yvqE; K00936 K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SDSE_0301 salK; K00936 K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK
D SDSE_0907 dpiB; K02476 two-component system, CitB family, sensor kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D SDSE_0342 lytS; K07704 two-component system, LytT family, sensor histidine kinase LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D SDSE_2057 fasB; K07706 two-component system, AgrA family, sensor histidine kinase AgrC K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_0542 comD; K07706 two-component system, AgrA family, sensor histidine kinase AgrC K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_1737 rocA; K07706 two-component system, AgrA family, sensor histidine kinase AgrC K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_2056 fasC; sensory transduction protein kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_1730 yesM; K07718 two-component system, sensor histidine kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SDSE_1658 yesM; K07718 two-component system, sensor histidine kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:sdc01009]
D SDSE_1131 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDSE_1787 pppL; protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D SDSE_0743 serB; K01079 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:sdc01002]
D SDSE_0829 lsp; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SDSE_1809 pepC; aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D SDSE_0986 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SDSE_0915 GMP synthase [glutamine-hydrolyzing] K07010 K07010; putative glutamine amidotransferase
D SDSE_0546 comA; K12292 ATP-binding cassette, subfamily C,bacterial, competence factor transporting protein K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SDSE_0533 blpA; K06148 ATP-binding cassette, subfamily C,bacterial K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SDSE_1496 Probable cell wall hydrolase lytN K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D SDSE_0041 sibA; Protein P54 Flags: Precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SDSE_0048 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SDSE_1128 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SDSE_0950 srtA; K07284 sortase A K07284 srtA; sortase A [EC:3.4.22.70]
D SDSE_0161 Uncharacterized protein yhcS K07284 srtA; sortase A [EC:3.4.22.70]
D SDSE_0160 Uncharacterized protein yhcS K07284 srtA; sortase A [EC:3.4.22.70]
D SDSE_0163 Uncharacterized protein yhcS K07284 srtA; sortase A [EC:3.4.22.70]
D SDSE_0715 pepD; K08659 dipeptidase A K08659 pepDA; dipeptidase [EC:3.4.-.-]
D SDSE_0145 K07052 K07052 K07052; CAAX protease family protein
D SDSE_0552 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D SDSE_1469 K07052 K07052 K07052; CAAX protease family protein
D SDSE_0750 sagE; hypothetical protein K07052 K07052; CAAX protease family protein
D SDSE_1089 pepN; K01256 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SDSE_1481 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D SDSE_2167 pepO; K07386 putative endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D SDSE_1913 K07260 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SDSE_1168 pepV; K01270 aminoacylhistidine dipeptidase K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D SDSE_0400 dapE; K01439 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SDSE_0804 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SDSE_1433 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SDSE_0574 pepQ; Xaa-Pro aminopeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D SDSE_1959 pepP; K01271 X-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SDSE_1301 pepS; aminopeptidase PepS K19689 ampS; aminopeptidase [EC:3.4.11.-]
D SDSE_0015 ftsH; putative cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SDSE_0148 pepA; glutamyl aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D SDSE_0231 hypothetical protein K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D SDSE_0409 htpX; K03799 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SDSE_0252 eep; K01417 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SDSE_2286 htrA; K01362 K04771 degP; serine protease Do [EC:3.4.21.107]
D SDSE_0972 scpA; C5A peptidase precursor K08652 C5AP; C5a peptidase [EC:3.4.21.110]
D SDSE_0487 scpC; K01361 lactocepin K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D SDSE_0366 dacA; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDSE_0892 D-alanyl-D-alanine serine-type carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDSE_1510 clpP; K01358 ATP-dependent Clp protease, protease subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SDSE_1377 clpP; K01358 ATP-dependent Clp protease, protease subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SDSE_0458 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SDSE_1994 pepX; x-prolyl-dipeptidyl aminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D SDSE_1642 lon; K07177 PDZ domain-containing protein K07177 K07177; Lon-like protease
D SDSE_0994 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D SDSE_1978 spi; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SDSE_1129 sipC; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SDSE_1008 nsr; Nisin-resistance protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SDSE_0636 K08303 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:sdc01003]
D SDSE_0578 K03429 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D SDSE_0577 glycosyltransferase K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D SDSE_0763 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D SDSE_1808 K05366 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SDSE_0131 K03693 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D SDSE_2130 pbp2; K12555 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SDSE_0359 rgpG; undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:sdc01005]
D SDSE_0793 K12996 rhamnosyltransferase K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D SDSE_0794 alpha-L-Rha alpha-1,3-L-rhamnosyltransferase K12997 rgpB; rhamnosyltransferase [EC:2.4.1.-]
D SDSE_0797 glycosyltransferase K12998 rgpE; glucosyltransferase [EC:2.4.1.-]
D SDSE_0798 rgpF; K07272 rhamnosyltransferase K07272 rgpF; rhamnosyltransferase [EC:2.4.1.-]
D SDSE_0359 rgpG; undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SDSE_0570 K12999 glucosyltransferase K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sdc01011]
D SDSE_1450 murZ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SDSE_0773 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SDSE_0901 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SDSE_0421 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SDSE_1619 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SDSE_0454 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SDSE_1571 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SDSE_0983 K05363 serine/alanine adding enzyme K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D SDSE_0678 murM; UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase / UDP-N-acetylmuramoylpentapeptide-lysine N(6)-seryltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D SDSE_0677 murN; K12554 alanine adding enzyme K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D SDSE_1947 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SDSE_0432 glr; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SDSE_1820 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SDSE_1618 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SDSE_0357 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SDSE_0443 Lipid phosphate phosphohydrolase 1 K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SDSE_1808 K05366 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SDSE_0131 K03693 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D SDSE_2130 pbp2; K12555 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SDSE_1573 ftsI; K00687 penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D SDSE_1821 pbpX; K12556 penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
D SDSE_0366 dacA; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDSE_0892 D-alanyl-D-alanine serine-type carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDSE_1913 K07260 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SDSE_1496 Probable cell wall hydrolase lytN K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D SDSE_0041 sibA; Protein P54 Flags: Precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SDSE_0950 srtA; K07284 sortase A K07284 srtA; sortase A [EC:3.4.22.70]
D SDSE_0161 Uncharacterized protein yhcS K07284 srtA; sortase A [EC:3.4.22.70]
D SDSE_0160 Uncharacterized protein yhcS K07284 srtA; sortase A [EC:3.4.22.70]
D SDSE_0163 Uncharacterized protein yhcS K07284 srtA; sortase A [EC:3.4.22.70]
D SDSE_0423 K07082 K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:sdc01004]
D SDSE_1899 fabD; acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SDSE_1902 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SDSE_1897 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SDSE_1898 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SDSE_0499 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SDSE_1895 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SDSE_1900 fabK; enoyl- K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SDSE_1749 K02371 enoyl- K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SDSE_1904 phaB; enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
D SDSE_0592 K01897 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SDSE_0044 plsX; putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SDSE_1149 K08591 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SDSE_1558 K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:sdc01006]
D SDSE_1592 fps; dimethylallyltransferase / geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SDSE_0250 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SDSE_1265 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SDSE_0119 ubiA; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D SDSE_1001 unnamed protein product K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:sdc01007]
D SDSE_2058 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SDSE_0130 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SDSE_2277 trsA; tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SDSE_0274 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SDSE_2197 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SDSE_0491 metS; K01874 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SDSE_1609 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SDSE_1674 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SDSE_2110 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SDSE_0643 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SDSE_2203 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SDSE_0710 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SDSE_2204 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SDSE_1842 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SDSE_1841 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SDSE_1891 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SDSE_0253 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SDSE_0579 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SDSE_1473 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SDSE_0776 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SDSE_0777 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SDSE_1930 K10907 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SDSE_1144 bcaT; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SDSE_0219 pabB; K01665 para-aminobenzoate synthetase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D SDSE_0475 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:sdc00194]
D SDSE_0771 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SDSE_0770 atpD; K02112 F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SDSE_0769 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SDSE_0768 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SDSE_0767 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SDSE_0766 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SDSE_0764 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SDSE_0765 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:sdc03000]
D SDSE_1322 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1517 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1407 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1408 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1386 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1862 lacR; Lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D SDSE_0851 fruR; L-fucose operon activator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SDSE_1923 Inosine-5'-monophosphate dehydrogenase K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D SDSE_1641 HTH-type transcriptional repressor purR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SDSE_1276 malR; HTH-type transcriptional repressor purR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SDSE_1989 K02529 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SDSE_0575 ccpA; HTH-type transcriptional repressor purR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SDSE_0683 regR; HTH-type transcriptional repressor purR K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D SDSE_1954 scrR; HTH-type transcriptional repressor purR K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D SDSE_1740 araR; Arabinose metabolism transcriptional repressor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D SDSE_2170 Uncharacterized HTH-type transcriptional regulator ymfC K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D SDSE_0988 Uncharacterized HTH-type transcriptional regulator yurK K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D SDSE_0717 HTH-type transcriptional repressor yvoA K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D SDSE_0720 HTH-type transcriptional repressor dasR K03710 K03710; GntR family transcriptional regulator
D SDSE_1444 Fatty acid metabolism regulator protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D SDSE_2020 glnR; HTH-type transcriptional regulator glnR K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D SDSE_2094 perR; Ferric uptake regulation protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D SDSE_1654 fnr; Fumarate and nitrate reduction regulatory protein K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D SDSE_0191 Regulatory protein nsr K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D SDSE_0260 Cyclic AMP receptor-like protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D SDSE_1179 arsR; Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SDSE_2208 cadC; Cadmium efflux system accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D SDSE_1221 Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D SDSE_2217 X; Uncharacterized protein X K10947 K10947; PadR family transcriptional regulator
D SDSE_0508 scaR; Transcriptional regulator mntR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D SDSE_1453 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SDSE_0059 transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D SDSE_0557 mutR; HTH-type transcriptional regulator rgg K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D SDSE_1582 rggC; HTH-type transcriptional regulator rgg K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D SDSE_1700 C2; Repressor protein C2 K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D SDSE_2029 purR; Pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D SDSE_0916 rex; Redox-sensing transcriptional repressor rex K01926 rex; redox-sensing transcriptional repressor
D SDSE_1929 codY; GTP-sensing transcriptional pleiotropic repressor codY K03706 codY; transcriptional pleiotropic repressor
D SDSE_0187 Uncharacterized HTH-type transcriptional regulator yozG K07727 K07727; putative transcriptional regulator
D SDSE_0144 Uncharacterized transcriptional regulator in ATPase CF(0) region K07729 K07729; putative transcriptional regulator
D SDSE_0284 Uncharacterized HTH-type transcriptional regulator MJ0272 K07729 K07729; putative transcriptional regulator
D SDSE_1471 Uncharacterized transcriptional regulator in ATPase CF(0) region K07729 K07729; putative transcriptional regulator
D SDSE_2224 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D SDSE_0612 licT; Cryptic beta-glucoside bgl operon antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D SDSE_2102 Probable licABCH operon regulator Includes: RecName: Full=Putative phosphotransferase enzyme IIB component K03493 bglG1; transcriptional antiterminator
D SDSE_2287 parB; Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SDSE_1655 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SDSE_2196 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SDSE_1590 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SDSE_1910 hrcA; Heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor
D SDSE_2141 ctsR; Transcriptional regulator ctsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D SDSE_0629 hypothetical protein K03973 pspC; phage shock protein C
D SDSE_0832 pyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SDSE_0414 nrdR; Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR
D SDSE_0380 competence-specific sigma factor K12296 comX1_2; competence protein ComX
D SDSE_0328 putative competence protein ComX1 K12296 comX1_2; competence protein ComX
C 03021 Transcription machinery [BR:sdc03021]
D SDSE_0099 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SDSE_0132 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SDSE_0133 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SDSE_0340 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SDSE_1791 K03060 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SDSE_0790 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D SDSE_1872 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D SDSE_1955 nusB; N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB
D SDSE_2126 nusG; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D SDSE_0424 greA; Transcription elongation factor greA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:sdc03019]
D SDSE_0603 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SDSE_1230 K07021 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SDSE_2013 K12574 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SDSE_1793 2',3'-cyclic-nucleotide 2'-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SDSE_0567 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SDSE_2030 cbf; 3'-5' exoribonuclease yhaM K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D SDSE_1562 rheA; K05592 ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SDSE_1818 rheB; ATP-dependent RNA helicase DBP2 K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SDSE_0745 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDSE_0270 pnp; K00962 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SDSE_1131 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDSE_1908 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D SDSE_2138 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SDSE_0712 UPF0042 protein str0831 K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:sdc03011]
D SDSE_1140 rpsA; Polyribonucleotide nucleotidyltransferase K02945 RP-S1; small subunit ribosomal protein S1
D SDSE_2165 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SDSE_0079 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SDSE_2250 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SDSE_0090 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SDSE_1966 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SDSE_2026 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SDSE_0087 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SDSE_0288 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SDSE_0072 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SDSE_0098 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SDSE_2027 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SDSE_0097 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SDSE_2008 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SDSE_0086 rpsN; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D SDSE_0263 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SDSE_0843 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SDSE_0082 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SDSE_1964 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SDSE_0077 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SDSE_1086 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SDSE_0787 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SDSE_0516 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SDSE_0076 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SDSE_0073 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SDSE_0074 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SDSE_0085 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SDSE_0088 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SDSE_2256 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SDSE_0890 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SDSE_0515 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SDSE_0891 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SDSE_0287 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SDSE_0083 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SDSE_0092 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SDSE_0080 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SDSE_0100 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SDSE_0089 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SDSE_0737 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SDSE_0811 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SDSE_0825 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SDSE_0078 rplV; 50S ribosomal protein L22, chloroplastic K02890 RP-L22; large subunit ribosomal protein L22
D SDSE_0075 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SDSE_0084 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SDSE_0827 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SDSE_0349 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SDSE_0081 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SDSE_0091 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SDSE_0726 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D SDSE_2205 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SDSE_2206 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SDSE_0565 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SDSE_2129 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SDSE_2050 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SDSE_0810 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SDSE_0096 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SDSE_0023 5s_rRNA; rast_serv=119602.10.rna.4, 25472..25588, 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SDSE_0105 5s_rRNA; rast_serv=119602.10.rna.25, 85664..85780 K01985 5SrRNA; 5S ribosomal RNA
D SDSE_1770 5s_rRNA; rast_serv=119602.10.rna.64, 1681142..1681258c, 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SDSE_0325 5s_rRNA; rast_serv=119602.10.rna.42, 292813..292929, 5S RNA; Best Blastn Hit:dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome K01985 5SrRNA; 5S ribosomal RNA
D SDSE_0376 5s_rRNA; rast_serv=119602.10.rna.49, 345473..345589, 5S RNA; Best Blastn Hit:dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome K01985 5SrRNA; 5S ribosomal RNA
D SDSE_0020 16s_rRNA; rast_serv=119602.10.rna.1, 20646..22152, Small Subunit Ribosomal RNA; ssuRNA; see also GI:14268472 -published partial sequence K01977 16SrRNA; 16S ribosomal RNA
D SDSE_0322 16s_rRNA; rast_serv=119602.10.rna.39, 287987..289493, SSU rRNA; Best Blastn Hit: dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome; Good Blastn Hits: emb|AJ319644.1| Streptococcus dysgalactiae subsp. equisimilis partial 16S rRNA gene,strain AC-4436, see also emb|AJ314609.1| Streptococcus dysgalactiae subsp. equisimilis partial 16S rRNA gene,strain AC-2713 K01977 16SrRNA; 16S ribosomal RNA
D SDSE_1773 16s_rRNA; rast_serv=119602.10.rna.67, 1684578..1686084c,Small Subunit Ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDSE_0102 16s_rRNA; rast_serv=119602.10.rna.22, 80839..82346 K01977 16SrRNA; 16S ribosomal RNA
D SDSE_0373 16s_rRNA; rast_serv=119602.10.rna.46, 340644..342154, SSU rRNA; Best Blastn Hit: dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome; Good Blastn Hits: emb|AJ319644.1| Streptococcus dysgalactiae subsp. equisimilis partial 16S rRNA gene,strain AC-4436, see also emb|AJ314609.1| Streptococcus dysgalactiae subsp. equisimilis partial 16S rRNA gene,strain AC-2713 K01977 16SrRNA; 16S ribosomal RNA
D SDSE_0104 23s_rRNA; rast_serv=119602.10.rna.24, 82669..85572 K01980 23SrRNA; 23S ribosomal RNA
D SDSE_0375 23s_rRNA; rast_serv=119602.10.rna.48, 342477..345381, LSU rRNA; Best Blastn Hit:dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome K01980 23SrRNA; 23S ribosomal RNA
D SDSE_0324 23s_rRNA; rast_serv=119602.10.rna.41, 289816..292721, LSU rRNA; Best Blastn Hit:dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome K01980 23SrRNA; 23S ribosomal RNA
D SDSE_1771 23s_rRNA; rast_serv=119602.10.rna.65, 1681350..1684255c,Large Subunit Ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDSE_0022 23s_rRNA; rast_serv=119602.10.rna.3, 22475..25380, Large Subunit Ribosomal RNA; lsuRNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:sdc03009]
D SDSE_0603 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SDSE_0531 era; GTP-binding protein era homolog K03595 era; GTPase
D SDSE_1299 obgE; Uncharacterized GTP-binding protein HI0877 K03979 obgE; GTPase [EC:3.6.5.-]
D SDSE_1872 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D SDSE_1955 nusB; N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB
D SDSE_2126 nusG; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D SDSE_1305 rsuA; K06183 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SDSE_1484 K06183 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SDSE_2035 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SDSE_1788 sunL; K03500 ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SDSE_1084 K00564 ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SDSE_1644 K00599 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SDSE_0226 K09761 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SDSE_0407 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SDSE_1823 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SDSE_0472 K07056 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SDSE_1591 Hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D SDSE_0280 K03218 RNA methyltransferase, TrmH family K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SDSE_2285 UPF0247 protein CPE2600 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SDSE_0813 K06969 putative SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SDSE_1632 K06941 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SDSE_1428 rumA; K00599 K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SDSE_0439 rluB; K06178 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SDSE_0830 K06180 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SDSE_2133 K06180 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SDSE_0924 rluD; K06180 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SDSE_2010 rimI; K03789 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SDSE_0846 rimM; Ribosome maturation factor rimM K02860 rimM; 16S rRNA processing protein RimM
D SDSE_0225 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SDSE_2183 K07447 putative holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SDSE_0275 Uncharacterized 16.3 kDa protein in atpI 5'region K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D SDSE_1562 rheA; K05592 ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SDSE_1818 rheB; ATP-dependent RNA helicase DBP2 K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SDSE_2034 engC; K06949 ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SDSE_0417 engA; GTP-binding protein engA K03977 engA; GTPase
D SDSE_1041 rbgA; GTP-binding protein engA K14540 rbgA; ribosome biogenesis GTPase A
D SDSE_1264 hflX; tRNA modification GTPase mnmE K03665 hflX; GTPase
D SDSE_0384 GTP-binding protein engA K06948 yqeH; 30S ribosome assembly GTPase
D SDSE_0939 Putative ribosome maturation factor rimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SDSE_0237 relA; K00951 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SDSE_1868 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D SDSE_1873 UPF0090 protein VP2458 K09748 rimP; ribosome maturation factor RimP
D SDSE_2273 Uncharacterized protein yaaA K14761 rlbA; ribosome-associated protein
D SDSE_0389 Uncharacterized protein C7orf30 homolog K09710 ybeB; ribosome-associated protein
D SDSE_0529 Putative metalloprotease BLi02723/BL03671 K07042 ybeY; probable rRNA maturation factor
D SDSE_0385 CAF1; CRS2-associated factor 1, chloroplastic K07574 yhbY; RNA-binding protein
D SDSE_1776 Ribosome-associated factor Y K05808 hpf; ribosome hibernation promoting factor
D SDSE_0005 ychF; Putative GTP-binding protein YLF2 K06942 ychF; ribosome-binding ATPase
D SDSE_0410 K07040 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:sdc03016]
D SDSE_1262 elaC; K00784 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D SDSE_0859 papS; tRNA CCA-pyrophosphorylase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SDSE_0253 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SDSE_1609 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SDSE_2110 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SDSE_0491 metS; K01874 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SDSE_2197 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SDSE_0643 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SDSE_2203 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SDSE_1473 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SDSE_0710 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SDSE_0579 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SDSE_1891 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SDSE_0274 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SDSE_1674 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SDSE_2204 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SDSE_0776 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SDSE_0777 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SDSE_0130 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SDSE_2277 trsA; tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SDSE_0238 dtd; K07560 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SDSE_1879 hit; K02503 Hit-like protein involved in cell-cycle regulation K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SDSE_1875 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SDSE_0331 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SDSE_1101 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SDSE_0821 nifS; K04487 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SDSE_0919 K04487 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SDSE_0939 Putative ribosome maturation factor rimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SDSE_1265 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SDSE_1167 trmE; tRNA modification GTPase mnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SDSE_2258 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SDSE_2054 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SDSE_1842 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SDSE_1841 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SDSE_2058 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SDSE_0647 Prolyl-tRNA synthetase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D SDSE_0186 Prolyl-tRNA synthetase K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D SDSE_2087 K11991 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SDSE_0155 dusB; tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SDSE_1029 gid; tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SDSE_0847 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SDSE_1256 K06967 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D SDSE_0441 K03216 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SDSE_0427 K03437 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D SDSE_2261 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SDSE_1486 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SDSE_0702 Putative electron transport protein yhbA K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D SDSE_2066 Uncharacterized protein HI0882 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D SDSE_2091 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SDSE_0822 thiI; Probable thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SDSE_0013 tilS; K04075 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SDSE_2011 Probable O-sialoglycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SDSE_2009 gcp; putative DNA-binding/iron metalloprotein/AP endonuclease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SDSE_1883 UPF0079 ATP-binding protein ydiB K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SDSE_0391 UPF0348 protein stu1615 K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D SDSE_0567 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SDSE_0270 pnp; K00962 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:sdc03012]
D SDSE_1869 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SDSE_0809 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SDSE_1227 ykhF; K06158 ATP-binding cassette, sub-family F,member 3 K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D SDSE_2166 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D SDSE_0662 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D SDSE_2025 fusA; K02355 elongation factor EF-G K02355 fusA; elongation factor G
D SDSE_0937 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SDSE_0520 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D SDSE_0938 hemK; peptide release factor-glutamine N5-methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SDSE_0006 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SDSE_0095 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SDSE_1957 efp; Elongation factor P K02356 efp; elongation factor P
D SDSE_0703 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D SDSE_1567 prfC; Elongation factor G 2 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:sdc03110]
D SDSE_2140 clpC; Chaperone protein clpB K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D SDSE_1606 clpE; Chaperone protein clpB K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D SDSE_0887 clpL; Probable ATP-dependent Clp protease ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D SDSE_0884 clpX; ATP-dependent Clp protease ATP-binding subunit clpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SDSE_1908 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D SDSE_2138 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SDSE_1905 dnaJ; Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D SDSE_0156 hslO; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D SDSE_1909 grpE; Protein grpE K03687 GRPE; molecular chaperone GrpE
D SDSE_2139 10 kDa chaperonin K04078 groES; chaperonin GroES
D SDSE_2286 htrA; K01362 K04771 degP; serine protease Do [EC:3.4.21.107]
D SDSE_0015 ftsH; putative cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SDSE_0765 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SDSE_0972 scpA; C5A peptidase precursor K08652 C5AP; C5a peptidase [EC:3.4.21.110]
D SDSE_0487 scpC; K01361 lactocepin K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D SDSE_0512 cypB; K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SDSE_1782 K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SDSE_1474 prsA; foldase protein PrsA K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D SDSE_1972 trxA; Thioredoxin-1 K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:sdc04131]
D SDSE_1201 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SDSE_1742 K01191 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D SDSE_2024 plr; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SDSE_1577 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_0203 K01834 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_0196 K01834 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_1130 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:sdc03032]
D SDSE_1322 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1517 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1407 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1408 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1386 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1584 Integration host factor subunit alpha K03530 hupB; DNA-binding protein HU-beta
D SDSE_0001 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D SDSE_1427 dnaC; K02314 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SDSE_2255 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SDSE_0789 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SDSE_0415 dnaB; replicative DNA helicase K03346 dnaB; replication initiation and membrane attachment protein
D SDSE_0416 dnaI; Chromosomal replication initiator protein dnaA K11144 dnaI; primosomal protein DnaI
D SDSE_0153 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDSE_1965 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDSE_1132 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDSE_0255 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SDSE_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDSE_1490 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDSE_0469 dnaX; K02341 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDSE_2001 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SDSE_1455 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDSE_1040 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SDSE_1977 K03471 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SDSE_2097 polA; K02335 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDSE_0757 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SDSE_0949 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SDSE_0741 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SDSE_1146 parC; K02621 topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SDSE_1148 gyrB; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SDSE_1038 topA; K03168 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SDSE_1343 K03169 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:sdc03036]
D SDSE_1322 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1517 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1407 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1408 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1386 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_0603 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SDSE_1584 Integration host factor subunit alpha K03530 hupB; DNA-binding protein HU-beta
D SDSE_0001 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D SDSE_1627 dpr; K04047 starvation-inducible DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein
D SDSE_0604 smc; Chromosome partition protein smc K03529 smc; chromosome segregation protein
D SDSE_0437 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D SDSE_0438 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D SDSE_1616 ftsA; Chaperone protein dnaK2 K03590 ftsA; cell division protein FtsA
D SDSE_0010 putative cell division protein K13052 divIC; cell division protein DivIC
D SDSE_0704 ftsE; Methionine import ATP-binding protein metN K09812 ftsE; cell division transport system ATP-binding protein
D SDSE_0513 ftsK; DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SDSE_1822 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D SDSE_1617 ftsQ; Cell division protein ftsQ homolog K03589 ftsQ; cell division protein FtsQ
D SDSE_0659 ftsW; Probable cell division protein ftsW K03588 ftsW; cell division protein FtsW
D SDSE_0705 ftsX; Macrolide export ATP-binding/permease protein macB K09811 ftsX; cell division transport system permease protein
D SDSE_1615 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D SDSE_0742 ezrA; Septation ring formation regulator ezrA K06286 ezrA; septation ring formation regulator
D SDSE_1610 Septum site-determining protein divIVA K04074 divIVA; cell division initiation protein
D SDSE_1613 Cell division protein sepF K09772 sepF; cell division inhibitor SepF
D SDSE_0739 ftsW; Cell division protein ftsW K05837 rodA; rod shape determining protein RodA
D SDSE_2287 parB; Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SDSE_1146 parC; K02621 topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SDSE_1148 gyrB; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SDSE_2258 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SDSE_0407 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SDSE_1029 gid; tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SDSE_0885 engB; Probable GTP-binding protein engB K03978 engB; GTP-binding protein
D SDSE_0714 Uncharacterized protein MG103 K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:sdc03400]
D SDSE_0477 ogt; K00567 methylated-DNA- K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D SDSE_1599 phr; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D SDSE_1151 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SDSE_1968 mutY; K03575 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SDSE_1257 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SDSE_1607 mutT; K03574 7,8-dihydro-8-oxoguanine triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SDSE_0223 mutT; K03574 7,8-dihydro-8-oxoguanine triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SDSE_1247 mutX; K03574 7,8-dihydro-8-oxoguanine triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SDSE_2136 mutX; MutT/NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SDSE_2065 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SDSE_2190 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SDSE_0559 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SDSE_0481 exoA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SDSE_1260 recJ; K07462 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SDSE_0757 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SDSE_2097 polA; K02335 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDSE_1960 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D SDSE_1294 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D SDSE_1175 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SDSE_1117 pcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SDSE_0132 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SDSE_0133 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SDSE_0099 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SDSE_0340 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SDSE_1791 K03060 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SDSE_0007 mfd; K03723 transcription-repair coupling factor (superfamily II helicase) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SDSE_2194 mutS; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D SDSE_1974 DNA mismatch repair protein mutS K07456 mutS2; DNA mismatch repair protein MutS2
D SDSE_2193 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D SDSE_1594 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SDSE_1593 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SDSE_1132 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDSE_0255 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SDSE_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDSE_1490 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDSE_0469 dnaX; K02341 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDSE_2001 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SDSE_1455 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDSE_0153 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDSE_1965 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDSE_1979 recD; K03581 exodeoxyribonuclease V alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SDSE_2187 recA; recombinase A K03553 recA; recombination protein RecA
D SDSE_2191 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D SDSE_0061 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SDSE_1790 priA; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SDSE_2064 radA; DNA repair protein radA homolog K04485 radA; DNA repair protein RadA/Sms
D SDSE_2274 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D SDSE_1935 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SDSE_0043 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D SDSE_1572 recR; Recombination protein recR K06187 recR; recombination protein RecR
D SDSE_1589 recN; DNA repair protein recN K03631 recN; DNA repair protein RecN (Recombination protein N)
D SDSE_1807 recU; Holliday junction resolvase recU K03700 recU; recombination protein U
D SDSE_0784 rexA; ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D SDSE_0783 rexB; ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D SDSE_1666 cas1; hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D SDSE_1206 putative cytoplasmic protein K15342 cas1; CRISP-associated protein Cas1
D SDSE_0563 K06915 K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D SDSE_0949 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SDSE_0741 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SDSE_1038 topA; K03168 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SDSE_1584 Integration host factor subunit alpha K03530 hupB; DNA-binding protein HU-beta
D SDSE_1981 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SDSE_1547 DNA polymerase IV K03502 umuC; DNA polymerase V
D SDSE_1415 DNA polymerase IV K03502 umuC; DNA polymerase V
D SDSE_0994 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D SDSE_1760 recX; Regulatory protein recX K03565 recX; regulatory protein
D SDSE_0708 dinG; K03722 ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SDSE_1466 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDSE_0494 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDSE_1467 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDSE_0492 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDSE_0730 Uncharacterized protein MG371 K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:sdc03029]
D SDSE_1869 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SDSE_0809 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SDSE_2166 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D SDSE_0662 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D SDSE_2025 fusA; K02355 elongation factor EF-G K02355 fusA; elongation factor G
D SDSE_0531 era; GTP-binding protein era homolog K03595 era; GTPase
D SDSE_0130 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SDSE_2110 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SDSE_2203 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SDSE_2197 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SDSE_1919 gatA; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SDSE_1918 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SDSE_1920 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SDSE_0153 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDSE_1965 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDSE_1908 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D SDSE_1909 grpE; Protein grpE K03687 GRPE; molecular chaperone GrpE
D SDSE_2138 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SDSE_2139 10 kDa chaperonin K04078 groES; chaperonin GroES
D SDSE_1905 dnaJ; Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D SDSE_0821 nifS; K04487 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SDSE_0919 K04487 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SDSE_0425 oxaA; Membrane protein oxaA 2 Flags: Precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDSE_2053 Membrane protein oxaA 1 Flags: Precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:sdc02000]
D SDSE_1335 Lipid A export ATP-binding/permease protein msbA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D SDSE_1334 ABC transporter related K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D SDSE_1630 Lipid A export ATP-binding/permease protein msbA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_1629 Putative ABC transporter ATP-binding protein exp8 K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_2068 Lipid A export ATP-binding/permease protein msbA K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_2067 Lipid A export ATP-binding/permease protein msbA K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_0861 Lipid A export ATP-binding/permease protein msbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_0944 Lipid A export ATP-binding/permease protein msbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_0862 Lipid A export ATP-binding/permease protein msbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_0945 Lipid A export ATP-binding/permease protein msbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDSE_0868 Lipid A export ATP-binding/permease protein msbA K18216 steA; ATP-binding cassette, subfamily B, tetracycline resistant protein
D SDSE_0869 Lipid A export ATP-binding/permease protein msbA K18217 steB; ATP-binding cassette, subfamily B, tetracycline resistant protein
D SDSE_0546 comA; K12292 ATP-binding cassette, subfamily C,bacterial, competence factor transporting protein K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SDSE_0533 blpA; K06148 ATP-binding cassette, subfamily C,bacterial K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SDSE_0124 cydC; Lipid A export ATP-binding/permease protein msbA K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SDSE_0123 cydD; Lipid A export ATP-binding/permease protein msbA K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D SDSE_1939 cycC; Lipid A export ATP-binding/permease protein msbA K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D SDSE_1940 Lipid A export ATP-binding/permease protein msbA K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D SDSE_2198 msrA; Spermidine/putrescine import ATP-binding protein potA K18231 msr; macrolide transport system ATP-binding/permease protein
D SDSE_1551 Ribose import ATP-binding protein rbsA K18231 msr; macrolide transport system ATP-binding/permease protein
D SDSE_0860 Putative ABC transporter ATP-binding protein MM_3016 K15738 uup; ABC transport system ATP-binding/permease protein
D SDSE_1186 Uncharacterized protein HI0131 Flags: Precursor K02012 afuA; iron(III) transport system substrate-binding protein
D SDSE_0905 potD; Putrescine-binding periplasmic protein Flags: Precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SDSE_0904 potC; Spermidine/putrescine transport system permease protein potC K11070 potC; spermidine/putrescine transport system permease protein
D SDSE_0903 potB; Putrescine transport system permease protein potH K11071 potB; spermidine/putrescine transport system permease protein
D SDSE_0902 potA; K11072 spermidine/putrescine transport system ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SDSE_2098 Glycine betaine-binding periplasmic protein Flags: Precursor K02001 proW; glycine betaine/proline transport system permease protein
D SDSE_2099 proV; K02000 glycine betaine/proline transport system ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D SDSE_0930 proW; Choline-binding protein Flags: Precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D SDSE_0929 proV; Phosphate import ATP-binding protein pstB K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SDSE_0241 msmK; Multiple sugar-binding transport ATP-binding protein msmK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SDSE_1288 malX; Maltose/maltodextrin-binding protein Flags: Precursor K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SDSE_1278 malE; Maltotriose-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SDSE_1279 malF; Maltodextrin transport system permease protein malC K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SDSE_1286 malC; Maltodextrin transport system permease protein malC K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SDSE_1280 malG; Probable ABC transporter permease protein yurM K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SDSE_1284 malD; Maltose transport system permease protein malG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SDSE_1732 Lipoprotein lplA Flags: Precursor K17318 lplA; putative aldouronate transport system substrate-binding protein
D SDSE_1985 Lipoprotein lplA Flags: Precursor K17318 lplA; putative aldouronate transport system substrate-binding protein
D SDSE_1734 malF; Maltose transport system permease protein malF K17319 lplB; putative aldouronate transport system permease protein
D SDSE_1988 Protein lplB K17319 lplB; putative aldouronate transport system permease protein
D SDSE_1733 Protein lplC K17320 lplC; putative aldouronate transport system permease protein
D SDSE_1987 Probable ABC transporter permease protein ytcP K17320 lplC; putative aldouronate transport system permease protein
D SDSE_1636 rbsB; HTH-type transcriptional repressor purR K10439 rbsB; ribose transport system substrate-binding protein
D SDSE_1637 lsrC; Autoinducer 2 import system permease protein lsrC K10440 rbsC; ribose transport system permease protein
D SDSE_1638 rbsA; K10441 ribose transport system ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SDSE_0171 CD4+ T-cell-stimulating antigen Flags: Precursor K07335 bmpA; basic membrane protein A and related proteins
D SDSE_1080 Basic membrane protein A2 K07335 bmpA; basic membrane protein A and related proteins
D SDSE_1078 Uncharacterized protein MG120 homolog K23535 nupB; general nucleoside transport system permease protein
D SDSE_1077 Uncharacterized protein MG120 homolog K23536 nupC; general nucleoside transport system permease protein
D SDSE_1079 K02056 simple sugar transport system ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SDSE_1309 D-alanine--D-alanine ligase K02069 STAR2; UDP-glucose/iron transport system permease protein
D SDSE_1310 ybbL; Phosphate import ATP-binding protein pstB K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D SDSE_2047 sn-glycerol-3-phosphate-binding periplasmic protein ugpB Flags: Precursor K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D SDSE_2046 sn-glycerol-3-phosphate transport system permease protein ugpA K02025 ABC.MS.P; multiple sugar transport system permease protein
D SDSE_2045 sn-glycerol-3-phosphate transport system permease protein ugpE K02026 ABC.MS.P1; multiple sugar transport system permease protein
D SDSE_0621 pstS; Phosphate-binding protein pstS 2 K02040 pstS; phosphate transport system substrate-binding protein
D SDSE_1095 pstS; Phosphate-binding protein pstS 1 K02040 pstS; phosphate transport system substrate-binding protein
D SDSE_0622 pstC; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein
D SDSE_1094 pstC; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein
D SDSE_0623 Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D SDSE_1093 pstA; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D SDSE_0624 pstB; phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SDSE_1091 pstB; K02036 phosphate transport system ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SDSE_1092 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SDSE_1295 gnlP; Membrane-bound lytic murein transglycosylase F K10036 glnH; glutamine transport system substrate-binding protein
D SDSE_1296 glnQ; K02028 polar amino acid transport system ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SDSE_0596 Membrane-bound lytic murein transglycosylase F K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D SDSE_0594 glnP; Inner membrane amino-acid ABC transporter permease protein yecS K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SDSE_0595 L-cystine transport system permease protein tcyB K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SDSE_0597 glnQ; K10041 putative glutamine transport system ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SDSE_1153 Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D SDSE_1817 Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D SDSE_0397 atmA; Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D SDSE_1152 Probable amino-acid ABC transporter permease protein yckA K10009 tcyB; L-cystine transport system permease protein
D SDSE_1816 Inner membrane amino-acid ABC transporter permease protein yecS K10009 tcyB; L-cystine transport system permease protein
D SDSE_1815 K02028 polar amino acid transport system ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SDSE_0786 Membrane-bound lytic murein transglycosylase F K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SDSE_1604 occM; Octopine transport system permease protein occM K17077 artQ; arginine/lysine/histidine transport system permease protein
D SDSE_1603 artP; K02028 polar amino acid transport system ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D SDSE_0462 livK; Leu/Ile/Val-binding protein homolog 2 Flags: Precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SDSE_0463 livH; Autoinducer 2 import system permease protein lsrC K01997 livH; branched-chain amino acid transport system permease protein
D SDSE_0464 livM; Autoinducer 2 import system permease protein lsrC K01998 livM; branched-chain amino acid transport system permease protein
D SDSE_0465 livG; Sulfate/thiosulfate import ATP-binding protein cysA K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SDSE_0466 livF; Spermidine/putrescine import ATP-binding protein potA K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SDSE_0398 atmB; D-methionine-binding lipoprotein metQ Flags: Precursor K02073 metQ; D-methionine transport system substrate-binding protein
D SDSE_0399 atmB; D-methionine-binding lipoprotein metQ Flags: Precursor K02073 metQ; D-methionine transport system substrate-binding protein
D SDSE_1313 D-methionine-binding lipoprotein metQ Flags: Precursor K02073 metQ; D-methionine transport system substrate-binding protein
D SDSE_1563 D-methionine-binding lipoprotein metQ Flags: Precursor K02073 metQ; D-methionine transport system substrate-binding protein
D SDSE_0402 metI; D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D SDSE_1564 metI; Probable D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D SDSE_0401 atmD; Methionine import ATP-binding protein metN K02071 metN; D-methionine transport system ATP-binding protein
D SDSE_1565 Methionine import ATP-binding protein metN K02071 metN; D-methionine transport system ATP-binding protein
D SDSE_1233 Cysteine desulfurase K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D SDSE_1232 Autoinducer 2 import system permease protein lsrC K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D SDSE_1231 Spermidine/putrescine import ATP-binding protein potA K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D SDSE_0355 Inner membrane amino-acid ABC transporter permease protein yhdY K17073 lysX1; putative lysine transport system substrate-binding protein
D SDSE_0354 K02028 polar amino acid transport system ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D SDSE_1123 Membrane-bound lytic murein transglycosylase F K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SDSE_1125 hisM; Inner membrane amino-acid ABC transporter permease protein yecS K02029 ABC.PA.P; polar amino acid transport system permease protein
D SDSE_1124 K02028 polar amino acid transport system ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SDSE_2018 oppA; Periplasmic oligopeptide-binding protein Flags: Precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D SDSE_0367 oppA; Oligopeptide-binding protein aliB Flags: Precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D SDSE_2017 oppB; Putative oligopeptide transport system permease protein oppB2 K15581 oppB; oligopeptide transport system permease protein
D SDSE_0368 oppB; Oligopeptide transport system permease protein amiC K15581 oppB; oligopeptide transport system permease protein
D SDSE_2016 oppC; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D SDSE_0369 dppC; Dipeptide transport system permease protein dppC K15582 oppC; oligopeptide transport system permease protein
D SDSE_2015 oppD; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SDSE_0370 oppD; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SDSE_2014 oppF; Oligopeptide transport ATP-binding protein oppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SDSE_0371 oppF; Oligopeptide transport ATP-binding protein amiF K10823 oppF; oligopeptide transport system ATP-binding protein
D SDSE_0981 dppA; Glutathione-binding protein gsiB Flags: Precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SDSE_0980 dppB; Putative peptide permease protein BOV_A0351 K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SDSE_0979 dppC; Oligopeptide transport system permease protein appC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SDSE_0978 dppD; Phosphate import ATP-binding protein pstB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SDSE_0977 dppE; Sulfate/thiosulfate import ATP-binding protein cysA K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SDSE_0452 fhuD; Probable ABC transporter-binding protein yxeB Flags: Precursor K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D SDSE_0451 fhuB; Ferrichrome transport system permease protein fhuB K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D SDSE_0450 fhuG; Vitamin B12 import system permease protein btuC K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D SDSE_0453 fhuA; ferrichrome transport ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D SDSE_1943 Vitamin B12-binding protein Flags: Precursor K25113 htsA; heme transport system substrate-binding protein
D SDSE_1942 fhuB; Putative ABC transporter permease protein MJ0087 K25114 htsB; heme transport system permease protein
D SDSE_1941 fhuC; K02013 iron complex transport system ATP-binding protein K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D SDSE_1944 shp; hypothetical protein K25119 shp; heme transport system cell surface heme-binding protein
D SDSE_1945 Leucine-rich repeat-containing G-protein coupled receptor 4 Flags: Precursor K25120 shr; heme sequestration protein
D SDSE_0974 psaA; Manganese ABC transporter substrate-binding lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D SDSE_0716 adcA; Zinc-binding protein adcA Flags: Precursor K09815 znuA; zinc transport system substrate-binding protein
D SDSE_0129 adcB; Manganese transport system membrane protein mntC K09816 znuB; zinc transport system permease protein
D SDSE_0128 adcC; K09817 zinc transport system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SDSE_0509 ssaB; Manganese ABC transporter substrate-binding lipoprotein K11704 mtsA; iron/zinc/manganese/copper transport system substrate-binding protein
D SDSE_0511 mtsC; 29 kDa membrane protein in scaA 5'region K11705 mtsC; iron/zinc/manganese/copper transport system permease protein
D SDSE_0510 mtsB; Phosphate import ATP-binding protein pstB K11706 mtsB; iron/zinc/manganese/copper transport system ATP-binding protein
D SDSE_2089 bioY; Probable biotin transporter bioY K03523 bioY; biotin transport system substrate-specific component
D SDSE_0232 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D SDSE_1938 membrane-bound protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D SDSE_1333 hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D SDSE_0654 integral membrane protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D SDSE_2266 cbiQ; Putative ABC transporter ATP-binding protein BL0043 K16785 ecfT; energy-coupling factor transport system permease protein
D SDSE_1332 K02008 cobalt/nickel transport system permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D SDSE_1937 Transmembrane component BL0694 of energizing module of predicted K16785 ecfT; energy-coupling factor transport system permease protein
D SDSE_2268 cbiO; Cobalt import ATP-binding protein cbiO 2 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDSE_2267 cbiO; Cobalt import ATP-binding protein cbiO 1 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDSE_1331 Ribose import ATP-binding protein rbsA K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDSE_1936 cbiO; Putative ABC transporter ATP-binding protein MA_1747 K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDSE_0754 sagI; Putative transport permease yfiM K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D SDSE_0753 sagH; Putative transport permease yfiM K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D SDSE_0752 sagG; Spermidine/putrescine import ATP-binding protein potA K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D SDSE_1006 bceB; ABC transporter permease protein yxdM K19084 braE; bacitracin transport system permease protein
D SDSE_1007 Methionine import ATP-binding protein metN K19083 braD; bacitracin transport system ATP-binding protein
D SDSE_0840 Macrolide export ATP-binding/permease protein macB K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D SDSE_0965 Macrolide export ATP-binding/permease protein macB K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D SDSE_0964 Methionine import ATP-binding protein metN K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D SDSE_0839 Spermidine/putrescine import ATP-binding protein potA K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D SDSE_0705 ftsX; Macrolide export ATP-binding/permease protein macB K09811 ftsX; cell division transport system permease protein
D SDSE_0704 ftsE; Methionine import ATP-binding protein metN K09812 ftsE; cell division transport system ATP-binding protein
D SDSE_0582 K01992 ABC-2 type transport system permease protein K25154 evrC; viologen exporter family transport system permease protein
D SDSE_0581 K09686 antibiotic transport system permease protein K25155 evrB; viologen exporter family transport system permease protein
D SDSE_0580 drrA; K09687 antibiotic transport system ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D SDSE_1877 ecsB; Protein K25157 ecsB; ABC-2 type transport system permease protein
D SDSE_1878 ecsA; Spermidine/putrescine import ATP-binding protein potA K25158 ecsA; ABC-2 type transport system ATP-binding protein
D SDSE_1828 proB; K01992 ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SDSE_0795 Capsule polysaccharide export inner-membrane protein ctrC K01992 ABC-2.P; ABC-2 type transport system permease protein
D SDSE_0214 K09686 antibiotic transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SDSE_0796 K01990 ABC-2 type transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDSE_1134 Sulfate/thiosulfate import ATP-binding protein cysA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDSE_1829 Phosphate import ATP-binding protein pstB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDSE_0561 Phosphate import ATP-binding protein pstB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDSE_0213 K09687 antibiotic transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDSE_1757 Spermidine/putrescine import ATP-binding protein potA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDSE_0780 Macrolide export ATP-binding/permease protein macB K02004 ABC.CD.P; putative ABC transport system permease protein
D SDSE_1106 Uncharacterized ABC transporter permease MJ0797 K02004 ABC.CD.P; putative ABC transport system permease protein
D SDSE_0300 salY; ABC transporter permease protein yxdM K02004 ABC.CD.P; putative ABC transport system permease protein
D SDSE_0299 salY; Bacitracin export permease protein bceB K02004 ABC.CD.P; putative ABC transport system permease protein
D SDSE_0781 Methionine import ATP-binding protein metN K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SDSE_0298 salX; Spermidine/putrescine import ATP-binding protein potA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SDSE_1107 Spermidine/putrescine import ATP-binding protein potA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SDSE_0360 sufC; Phosphate import ATP-binding protein pstB K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SDSE_1330 Multidrug resistance protein mdtK K26937 dinF; MATE family, multidrug efflux pump
D SDSE_0069 Multidrug resistance protein mdtK K26937 dinF; MATE family, multidrug efflux pump
D SDSE_1476 Monocarboxylate transporter 12 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D SDSE_0503 glpT; Glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D SDSE_0564 pmrA; Multidrug resistance protein mdtG K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D SDSE_2192 lmrP; Multidrug resistance protein mdtH K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D SDSE_0611 Probable transport protein hsrA K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D SDSE_1552 Uncharacterized MFS-type transporter ykuC K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D SDSE_1463 ptsI; K08483 phosphotransferase system, enzyme I,PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SDSE_1464 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D SDSE_0228 K02777 PTS system, glucose-specific IIA component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SDSE_1952 scrA; K02808 PTS system, sucrose-specific IIA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SDSE_0613 K02755 PTS system, beta-glucosides-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SDSE_2169 treP; K02817 PTS system, trehalose-specific IIA component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDSE_0853 fruA; K02768 PTS system, fructose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SDSE_0175 lacF; K02759 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SDSE_0176 K02760 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SDSE_0177 Lichenan permease IIC component K02761 celB; cellobiose PTS system EIIC component
D SDSE_0311 K02773 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D SDSE_0313 K02774 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SDSE_0312 Galactitol permease IIC component K02775 gatC; galactitol PTS system EIIC component
D SDSE_1861 K02773 PTS system, galactitol-specific IIA component K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SDSE_1860 K02774 PTS system, galactitol-specific IIB component K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D SDSE_1859 K02775 PTS system, galactitol-specific IIC component K20114 gatC; galactose PTS system EIIC component
D SDSE_1886 manL; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SDSE_0725 K02793 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SDSE_1192 K02793 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SDSE_1887 manM; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SDSE_0723 N-acetylgalactosamine permease IIC component 1 K02795 manY; mannose PTS system EIIC component
D SDSE_1190 ptsC; N-acetylgalactosamine permease IIC component 1 K02795 manY; mannose PTS system EIIC component
D SDSE_1888 manN; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D SDSE_0724 K02796 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D SDSE_1189 ptsD; Mannose permease IID component K02796 manZ; mannose PTS system EIID component
D SDSE_1191 ptsB; K02794 PTS system, mannose-specific IIB component K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D SDSE_0689 agaF; K02744 PTS system,N-acetylgalactosamine-specific IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SDSE_0687 agaV; PTS system, N-acetylgalactosamine-specific IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D SDSE_0686 agaW; K02746 PTS system,N-acetylgalactosamine-specific IIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D SDSE_0685 agaD; PTS system, N-acetylgalactosamine-specific IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D SDSE_2107 K02821 PTS system, ascorbate-specific IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SDSE_0266 K02821 PTS system, ascorbate-specific IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SDSE_2108 K02822 PTS system, ascorbate-specific IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SDSE_0267 K02822 PTS system, ascorbate-specific IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SDSE_2109 ulaA; K03475 PTS system, ascorbate-specific IIC component K03475 ulaA; ascorbate PTS system EIIC component
D SDSE_0268 ulaA; Ascorbate-specific permease IIC component ulaA K03475 ulaA; ascorbate PTS system EIIC component
D SDSE_0587 hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D SDSE_1993 AQP4; Aquaporin-4 K02440 glpF; glycerol uptake facilitator
D SDSE_1836 glpF; Probable glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D SDSE_0588 glpF; Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D SDSE_1268 gst; K00799 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SDSE_1574 formate transporter K21993 fdhC; formate transporter
D SDSE_0788 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D SDSE_0335 Uncharacterized mscS family protein BUsg_437 K22044 ybiO; moderate conductance mechanosensitive channel
D SDSE_1304 Zinc transport protein zntB K03284 corA; magnesium transporter
D SDSE_1962 corA; Zinc transport protein zntB K03284 corA; magnesium transporter
D SDSE_0446 tlyC; UPF0053 protein yugS K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SDSE_1365 Extracellular matrix-binding protein ebhB K21449 ata; trimeric autotransporter adhesin
D SDSE_0344 lrgA; UPF0299 membrane protein YE2790 K05338 lrgA; holin-like protein
D SDSE_1254 Zinc transporter ZIP11 K07238 TC.ZIP; zinc transporter, ZIP family
D SDSE_2275 Putative sugar uptake protein EF_0928 K05340 glcU; glucose uptake protein
D SDSE_0484 lctP; L-lactate permease K03303 lutP; lactate permease
D SDSE_0404 Serine/threonine transporter sstT K07862 sstT; serine/threonine transporter
D SDSE_0985 nah; Glutathione-regulated potassium-efflux system protein kefB K26730 napA; Na+:H+ antiporter
D SDSE_0406 HKT2; Cation transporter HKT2 K03498 trkH; trk/ktr system potassium uptake protein
D SDSE_0405 ktrA; Adenosylhomocysteinase K03499 trkA; trk/ktr system potassium uptake protein
D SDSE_0833 pyrP; Nucleobase-ascorbate transporter 7 K02824 uraA; uracil permease
D SDSE_0933 pbuX; Uric acid permease pucK K16169 pbuX; xanthine permease
D SDSE_1884 Inner membrane protein yicO K06901 pbuG; adenine/guanine/hypoxanthine permease
D SDSE_0910 Chloride channel protein, skeletal muscle K03281 clcA; chloride channel protein, CIC family
D SDSE_1468 Chloride channel protein, skeletal muscle K03281 clcA; chloride channel protein, CIC family
D SDSE_0736 Chloride channel protein, skeletal muscle K03281 clcA; chloride channel protein, CIC family
D SDSE_1846 Uncharacterized protein yjbB K03324 yjbB; phosphate:Na+ symporter
D SDSE_1726 ytjG; Uncharacterized transporter MTH_1382 K24180 mleP; malate permease and related proteins
D SDSE_1561 kup; Probable potassium transport system protein kup K03549 kup; KUP system potassium uptake protein
D SDSE_0442 Uncharacterized protein ypaA K23675 fmnP; riboflavin transporter
D SDSE_0648 Proton-coupled thiamine transporter thiT K16789 thiT; thiamine transporter
D SDSE_1575 hypothetical protein K16788 niaX; niacin transporter
D SDSE_2260 UPF0056 membrane protein BUsg_257 K05595 marC; multiple antibiotic resistance protein
D SDSE_0659 ftsW; Probable cell division protein ftsW K03588 ftsW; cell division protein FtsW
D SDSE_1025 gcdB; K01605 methylmalonyl-CoA decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D SDSE_1018 oadB; K01605 methylmalonyl-CoA decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D SDSE_1011 oadA; oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D SDSE_1028 K01571 oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D SDSE_1027 hypothetical protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D SDSE_1019 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SDSE_1026 K01606 methylmalonyl-CoA decarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SDSE_1662 ccdA; K06196 cytochrome c-type biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D SDSE_0544 silD; Transport protein comB K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D SDSE_0963 Probable macrolide-specific efflux protein macA Flags: Precursor K24950 yknX; membrane fusion protein, antimicrobial resistance system
D SDSE_0838 Probable macrolide-specific efflux protein macA Flags: Precursor K24950 yknX; membrane fusion protein, antimicrobial resistance system
D SDSE_1602 feoA; Ferrous iron transport protein B K04758 feoA; ferrous iron transport protein A
D SDSE_1601 feoB; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:sdc02044]
D SDSE_1612 K02221 YggT family protein K02221 yggT; YggT family protein
D SDSE_1557 ComE operon protein 1 K02237 comEA; competence protein ComEA
D SDSE_1958 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SDSE_1556 ComE operon protein 3 K02238 comEC; competence protein ComEC
D SDSE_1491 ComE operon protein 3 K02238 comEC; competence protein ComEC
D SDSE_1778 ATP-dependent RNA helicase DBP2 K02240 comFA; competence protein ComFA
D SDSE_1777 ComF operon protein 3 K02242 comFC; competence protein ComFC
D SDSE_0135 pulE; General secretion pathway protein E K02243 comGA; competence protein ComGA
D SDSE_0136 exeF; General secretion pathway protein F K02244 comGB; competence protein ComGB
D SDSE_0137 Fimbrial protein MS11-D3A K02245 comGC; competence protein ComGC
D SDSE_0138 K02246 competence protein ComGD K02246 comGD; competence protein ComGD
D SDSE_0140 ComG operon protein 6 K02248 comGF; competence protein ComGF
D SDSE_1628 K02236 leader peptidase (prepilin peptidase) / N-methyltransferase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SDSE_1354 Protein virD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SDSE_1949 secA; Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SDSE_2128 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SDSE_0566 secG; Probable protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D SDSE_0093 secY; Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SDSE_0990 ffh; Signal recognition particle 54 kDa protein 2 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SDSE_0610 ftsY; Signal recognition 54 kDa protein K03110 ftsY; fused signal recognition particle receptor
D SDSE_0248 yajC; UPF0092 membrane protein BUsg_126 K03210 yajC; preprotein translocase subunit YajC
D SDSE_0425 oxaA; Membrane protein oxaA 2 Flags: Precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDSE_2053 Membrane protein oxaA 1 Flags: Precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:sdc02042]
D SDSE_1267 K11041 exfoliative toxin A/B K11041 eta; exfoliative toxin A/B
D SDSE_2123 slo; Streptolysin O K11031 slo; thiol-activated cytolysin
D SDSE_0446 tlyC; UPF0053 protein yugS K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SDSE_0746 sagA; bacteriocin-like prepropeptide K11046 sagA; streptolysin S associated protein
D SDSE_1046 ADIPOR-like receptor CG5315 K11068 hlyIII; hemolysin III
D SDSE_2084 speG; Exotoxin type G K11040 se; staphylococcal enterotoxin
D SDSE_1739 hyl; K01197 hyaluronoglucosaminidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 02022 Two-component system [BR:sdc02022]
D SDSE_0620 pnpS; K07636 two-component system, OmpR family,phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SDSE_0619 phoP; Probable transcriptional regulator ycf27 K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SDSE_0599 vicK; two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SDSE_0598 vicR; Transcriptional regulatory protein yycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D SDSE_1004 bceS; sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SDSE_1005 bceR; Probable transcriptional regulator ycf27 K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D SDSE_1087 ciaH; sensor protein CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SDSE_1088 ciaR; Response regulator mprA K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SDSE_0413 covS; sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D SDSE_0412 covR; Probable transcriptional regulator ycf27 K18941 arlR; two-component system, OmpR family, response regulator ArlR
D SDSE_0967 ihk; two-component system histidine kinase K18986 ihk; two-component system, OmpR family, sensor kinase Ihk [EC:2.7.13.3]
D SDSE_0966 irr; Probable transcriptional regulator ycf27 K18987 irr; two-component system, OmpR family, response regulator Irr
D SDSE_1784 yvqE; K00936 K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SDSE_1783 yvqC; Transcriptional regulatory protein liaR K11618 liaR; two-component system, NarL family, response regulator LiaR
D SDSE_0301 salK; K00936 K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK
D SDSE_0302 salR; Transcriptional regulatory protein degU K14989 salR; two-component system, NarL family, secretion system response regulator SalR
D SDSE_0907 dpiB; K02476 two-component system, CitB family, sensor kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D SDSE_0906 dpiA; Chemotaxis response regulator protein-glutamate methylesterase K02475 K02475; two-component system, CitB family, response regulator
D SDSE_0342 lytS; K07704 two-component system, LytT family, sensor histidine kinase LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D SDSE_0343 lytT; Sensory transduction protein lytT K07705 lytT; two-component system, LytTR family, response regulator LytT
D SDSE_2057 fasB; K07706 two-component system, AgrA family, sensor histidine kinase AgrC K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_0542 comD; K07706 two-component system, AgrA family, sensor histidine kinase AgrC K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_1737 rocA; K07706 two-component system, AgrA family, sensor histidine kinase AgrC K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_2056 fasC; sensory transduction protein kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SDSE_2055 fasA; Accessory gene regulator A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SDSE_0541 comE; Uncharacterized response regulatory protein ypdB K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SDSE_1730 yesM; K07718 two-component system, sensor histidine kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SDSE_1658 yesM; K07718 two-component system, sensor histidine kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SDSE_1729 yesN; Chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D SDSE_1187 yesN; Uncharacterized response regulatory protein SERP2406 K07720 yesN; two-component system, response regulator YesN
D SDSE_1659 yesN; Uncharacterized response regulatory protein SAR0214 K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:sdc02035]
D SDSE_1153 Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D SDSE_1817 Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D SDSE_0397 atmA; Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:sdc04812]
D SDSE_1615 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D SDSE_1616 ftsA; Chaperone protein dnaK2 K03590 ftsA; cell division protein FtsA
D SDSE_2287 parB; Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:sdc04147]
D SDSE_0745 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDSE_2024 plr; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SDSE_2022 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SDSE_1130 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDSE_0512 cypB; K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SDSE_2138 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SDSE_1908 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D SDSE_2081 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDSE_2276 guaB; K00088 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SDSE_0662 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D SDSE_1879 hit; K02503 Hit-like protein involved in cell-cycle regulation K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SDSE_0948 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SDSE_0592 K01897 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SDSE_0591 fadA; K00626 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_1795 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SDSE_0094 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SDSE_1259 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SDSE_0760 glgB; glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SDSE_1838 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SDSE_2019 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SDSE_0052 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SDSE_1222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDSE_0670 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDSE_0316 tpiA; K01803 triosephosphate isomerase (TIM) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDSE_1577 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_0203 K01834 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDSE_0196 K01834 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:sdc02048]
D SDSE_1666 cas1; hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D SDSE_1206 putative cytoplasmic protein K15342 cas1; CRISP-associated protein Cas1
D SDSE_1205 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D SDSE_1665 cas2; Uncharacterized protein MJ0386 K09951 cas2; CRISPR-associated protein Cas2
D SDSE_1671 cas3; Pre-mRNA-processing ATP-dependent RNA helicase PRP5 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D SDSE_1667 cas4; K07464 putative RecB family exonuclease K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D SDSE_1669 csd1; hypothetical protein K19117 csd1; CRISPR-associated protein Csd1
D SDSE_1668 csd2; putative cytoplasmic protein K19118 csd2; CRISPR-associated protein Csd2
D SDSE_1670 hypothetical protein K19119 cas5d; CRISPR-associated protein Cas5d
D SDSE_1207 csn1; K09952 hypothetical protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D SDSE_1204 hypothetical protein K19137 csn2; CRISPR-associated protein Csn2
D SDSE_1543 dam3; K06223 DNA adenine methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D SDSE_0142 K00571 site-specific DNA-methyltransferase (adenine-specific) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D SDSE_1322 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1517 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1407 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1408 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1386 K00558 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDSE_1522 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D SDSE_1389 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D SDSE_1541 cfxQ; putative restriction enzyme K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D SDSE_1406 putative restriction enzyme K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D SDSE_2223 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D SDSE_2224 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D SDSE_1715 K07473 DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D SDSE_1381 Uncharacterized protein HI0710 K07473 dinJ; DNA-damage-inducible protein J
D SDSE_0629 hypothetical protein K03973 pspC; phage shock protein C
D SDSE_1380 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D SDSE_1615 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D SDSE_1146 parC; K02621 topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SDSE_1148 gyrB; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SDSE_0821 nifS; K04487 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SDSE_0919 K04487 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:sdc04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:sdc04090]
C 01504 Antimicrobial resistance genes [BR:sdc01504]
D SDSE_0202 aadK; K05593 aminoglycoside 6-adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D SDSE_0868 Lipid A export ATP-binding/permease protein msbA K18216 steA; ATP-binding cassette, subfamily B, tetracycline resistant protein
D SDSE_0869 Lipid A export ATP-binding/permease protein msbA K18217 steB; ATP-binding cassette, subfamily B, tetracycline resistant protein
D SDSE_2198 msrA; Spermidine/putrescine import ATP-binding protein potA K18231 msr; macrolide transport system ATP-binding/permease protein
D SDSE_1551 Ribose import ATP-binding protein rbsA K18231 msr; macrolide transport system ATP-binding/permease protein
D SDSE_1552 Uncharacterized MFS-type transporter ykuC K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D SDSE_1488 blaA; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SDSE_1913 K07260 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SDSE_1292 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SDSE_1291 dltB; Protein dltB K03739 dltB; membrane protein involved in D-alanine export
D SDSE_1290 dltC; K03367 D-alanine-poly(phosphoribitol) ligase K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SDSE_1289 dltD; Protein dltD Flags: Precursor K03740 dltD; D-alanine transfer protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:sdc00536]
D SDSE_1739 hyl; K01197 hyaluronoglucosaminidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sdc00537]
D SDSE_1739 hyl; K01197 hyaluronoglucosaminidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
D SDSE_2125 nga; NAD glycohydrolase K18153 nga; NAD+ glycohydrolase [EC:3.2.2.5]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:sdc03100]
D SDSE_0021 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDSE_0374 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDSE_0103 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDSE_0323 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDSE_1772 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDSE_2284 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDSE_0031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDSE_0327 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDSE_0378 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDSE_0738 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDSE_1139 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDSE_0326 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDSE_0377 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDSE_2281 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDSE_0025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SDSE_1768 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SDSE_2152 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SDSE_0116 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SDSE_1141 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SDSE_0109 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDSE_2282 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDSE_1763 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDSE_0029 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDSE_0038 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDSE_0107 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDSE_0115 tRNA-His K14226 tRNA-His; tRNA His
D SDSE_0039 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDSE_1764 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDSE_0108 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDSE_0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDSE_0347 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDSE_0117 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDSE_0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDSE_1766 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDSE_0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDSE_1767 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDSE_0216 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDSE_0036 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDSE_0111 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDSE_0033 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDSE_0034 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDSE_0037 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SDSE_0112 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SDSE_0032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SDSE_0110 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDSE_0035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDSE_0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDSE_1874 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDSE_0028 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDSE_1765 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDSE_1681 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDSE_0114 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SDSE_0113 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SDSE_1142 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SDSE_0024 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDSE_1769 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDSE_0106 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDSE_0020 16s_rRNA; rast_serv=119602.10.rna.1, 20646..22152, Small Subunit Ribosomal RNA; ssuRNA; see also GI:14268472 -published partial sequence K01977 16SrRNA; 16S ribosomal RNA
D SDSE_0322 16s_rRNA; rast_serv=119602.10.rna.39, 287987..289493, SSU rRNA; Best Blastn Hit: dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome; Good Blastn Hits: emb|AJ319644.1| Streptococcus dysgalactiae subsp. equisimilis partial 16S rRNA gene,strain AC-4436, see also emb|AJ314609.1| Streptococcus dysgalactiae subsp. equisimilis partial 16S rRNA gene,strain AC-2713 K01977 16SrRNA; 16S ribosomal RNA
D SDSE_1773 16s_rRNA; rast_serv=119602.10.rna.67, 1684578..1686084c,Small Subunit Ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDSE_0102 16s_rRNA; rast_serv=119602.10.rna.22, 80839..82346 K01977 16SrRNA; 16S ribosomal RNA
D SDSE_0373 16s_rRNA; rast_serv=119602.10.rna.46, 340644..342154, SSU rRNA; Best Blastn Hit: dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome; Good Blastn Hits: emb|AJ319644.1| Streptococcus dysgalactiae subsp. equisimilis partial 16S rRNA gene,strain AC-4436, see also emb|AJ314609.1| Streptococcus dysgalactiae subsp. equisimilis partial 16S rRNA gene,strain AC-2713 K01977 16SrRNA; 16S ribosomal RNA
D SDSE_0104 23s_rRNA; rast_serv=119602.10.rna.24, 82669..85572 K01980 23SrRNA; 23S ribosomal RNA
D SDSE_0375 23s_rRNA; rast_serv=119602.10.rna.48, 342477..345381, LSU rRNA; Best Blastn Hit:dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome K01980 23SrRNA; 23S ribosomal RNA
D SDSE_0324 23s_rRNA; rast_serv=119602.10.rna.41, 289816..292721, LSU rRNA; Best Blastn Hit:dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome K01980 23SrRNA; 23S ribosomal RNA
D SDSE_1771 23s_rRNA; rast_serv=119602.10.rna.65, 1681350..1684255c,Large Subunit Ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDSE_0022 23s_rRNA; rast_serv=119602.10.rna.3, 22475..25380, Large Subunit Ribosomal RNA; lsuRNA K01980 23SrRNA; 23S ribosomal RNA
D SDSE_0023 5s_rRNA; rast_serv=119602.10.rna.4, 25472..25588, 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SDSE_0105 5s_rRNA; rast_serv=119602.10.rna.25, 85664..85780 K01985 5SrRNA; 5S ribosomal RNA
D SDSE_1770 5s_rRNA; rast_serv=119602.10.rna.64, 1681142..1681258c, 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SDSE_0325 5s_rRNA; rast_serv=119602.10.rna.42, 292813..292929, 5S RNA; Best Blastn Hit:dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome K01985 5SrRNA; 5S ribosomal RNA
D SDSE_0376 5s_rRNA; rast_serv=119602.10.rna.49, 345473..345589, 5S RNA; Best Blastn Hit:dbj|AP010935.1| Streptococcus dysgalactiae subsp. equisimilis GGS_124 DNA, complete genome K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SDSE_0690 idnO; gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D SDSE_0485 lctO; L-lactate oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2]
D SDSE_2154 ahpF; NADH dehydrogenase K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D SDSE_0522 msrA; methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SDSE_1660 msrA; bifunctional methionine sulfoxide reductase A/B protein K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D SDSE_1199 msrB; methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D SDSE_0732 K11209 GST-like protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SDSE_2153 ahpC; putative alkyl hydroperoxidase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D SDSE_0848 trxB; thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SDSE_1164 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D SDSE_2175 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D SDSE_0172 K04069 pyruvate formate lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SDSE_0447 pflC; pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SDSE_1802 K07444 putative N6-adenine-specific DNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D SDSE_0631 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SDSE_0934 apbE; Thiamine biosynthesis lipoprotein apbE Flags: Precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SDSE_0351 Uncharacterized protein SAR1202 K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D SDSE_1922 Putative phosphotransferase CD2411 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D SDSE_1537 L; K02334 DNA polymerase bacteriophage-type K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D SDSE_1401 L; K02334 DNA polymerase bacteriophage-type K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D SDSE_1216 Uncharacterized protein ybbP K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D SDSE_0630 ptsK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D SDSE_1229 estA; acetyl esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D SDSE_0383 Phosphoglycolate phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D SDSE_2257 Uncharacterized protein yybT K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D SDSE_2037 tatD; K03424 TatD DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SDSE_2036 K05985 ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D SDSE_0242 dexB; glucan 1,6-alpha-glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70]
D SDSE_0688 ugl; putative unsaturated glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D SDSE_0365 pbp7; K01286 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D SDSE_0239 ska; streptokinase K14745 ska; streptokinase A [EC:3.4.-.-]
D SDSE_0259 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SDSE_0864 fms; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SDSE_1461 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D SDSE_0166 UPF0076 protein PH0854 K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SDSE_0525 mycA; K10254 myosin-crossreactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D SDSE_1596 Carbohydrate kinase domain-containing protein Flags: Precursor K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D SDSE_0694 hylB; K01727 hyaluronate lyase K01727 hysA; hyaluronate lyase [EC:4.2.2.1]
D SDSE_0682 pacL; K01537 Ca2+-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D SDSE_1581 cadA; K01534 Cd2+/Zn2+-exporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D SDSE_0467 5'-AMP-activated protein kinase subunit gamma-3 K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D SDSE_0806 K05337 ferredoxin K05337 fer; ferredoxin
D SDSE_0363 nifU; Iron sulfur cluster assembly protein 1,mitochondrial K04488 iscU; nitrogen fixation protein NifU and related proteins
D SDSE_1973 ykgC; Soluble pyridine nucleotide transhydrogenase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D SDSE_0858 UPF0230 protein SPy_0865/M5005_Spy0672 K25232 fakB; fatty acid kinase fatty acid binding subunit
D SDSE_1587 UPF0230 protein lin2658 K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D SDSE_0234 nrdI; K03647 protein involved in ribonucleotide reduction K03647 nrdI; protein involved in ribonucleotide reduction
D SDSE_0493 nrdI; Protein nrdI K03647 nrdI; protein involved in ribonucleotide reduction
D SDSE_0571 sdzD; deoxyribonuclease precursor K15051 endA; DNA-entry nuclease
D SDSE_0775 endA; competence associated endonuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D SDSE_0951 K08234 glyoxylase I family protein K08234 yaeR; glyoxylase I family protein
D SDSE_1614 UPF0001 protein yggS K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D SDSE_1273 yieF; flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D SDSE_1480 yieF; flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SDSE_2142 csp; Major cold shock protein K03704 cspA; cold shock protein
D SDSE_1099 spxA; transcriptional regulator Spx K16509 spxA; regulatory protein spx
D SDSE_2185 spxA; Regulatory protein spx K16509 spxA; regulatory protein spx
D SDSE_0627 tex; Protein tex K06959 tex; protein Tex
C 99974 Translation
D SDSE_1781 Polyribonucleotide nucleotidyltransferase K07570 GSP13; general stress protein 13
C 99975 Protein processing
D SDSE_0339 tig; trigger factor K03545 tig; trigger factor
D SDSE_0568 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D SDSE_1465 nrdH; Glutaredoxin-C6 K06191 nrdH; glutaredoxin-like protein NrdH
D SDSE_0358 mecA; Adapter protein mecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D SDSE_0914 radC; DNA repair protein radC homolog K03630 radC; DNA repair protein RadC
D SDSE_2031 DNA recombination protein rmuC homolog K09760 rmuC; DNA recombination protein RmuC
D SDSE_1560 UPF0213 protein YPO3475/y0709/YP_0608 K07461 K07461; putative endonuclease
D SDSE_1039 smf; Protein smf K04096 smf; DNA processing protein
D SDSE_1258 dnaD; DNA replication protein dnaD K02086 dnaD; DNA replication protein
D SDSE_1702 Putative DNA relaxase nicK K07467 nicK; putative DNA relaxase
D SDSE_0291 Putative DNA relaxase nicK K07467 nicK; putative DNA relaxase
D SDSE_0217 cshA; Uncharacterized AAA domain-containing protein yrvN K07478 ycaJ; putative ATPase
D SDSE_1531 Protein FPV058 K06919 K06919; putative DNA primase/helicase
D SDSE_1395 Protein FPV058 K06919 K06919; putative DNA primase/helicase
D SDSE_0824 Probable transposase for insertion-like sequence element IS1161 K07482 K07482; transposase, IS30 family
D SDSE_1911 tra; Transposase for insertion sequence element IS1086 K07482 K07482; transposase, IS30 family
D SDSE_0070 tra; Transposase for insertion sequence element IS1086 K07482 K07482; transposase, IS30 family
D SDSE_0285 Probable transposase for insertion-like sequence element IS1161 K07482 K07482; transposase, IS30 family
D SDSE_0286 tra; Transposase for insertion sequence element IS1086 K07482 K07482; transposase, IS30 family
D SDSE_0456 tra; Transposase for insertion sequence element IS1086 K07482 K07482; transposase, IS30 family
D SDSE_0867 tra; Transposase for insertion sequence element IS1086 K07482 K07482; transposase, IS30 family
D SDSE_1277 Transposase for insertion sequence element IS4351 K07482 K07482; transposase, IS30 family
D SDSE_1680 tra; Transposase for insertion sequence element IS1086 K07482 K07482; transposase, IS30 family
D SDSE_0101 tra; Transposase for insertion sequence element IS4351 K07482 K07482; transposase, IS30 family
D SDSE_0320 Transposase for insertion sequence element IS4351 K07482 K07482; transposase, IS30 family
D SDSE_0728 tra; Transposase for insertion sequence element IS1086 K07482 K07482; transposase, IS30 family
D SDSE_0729 tra; Probable transposase for insertion-like sequence element IS1161 K07482 K07482; transposase, IS30 family
D SDSE_1116 tra; Transposase for insertion sequence element IS1086 K07482 K07482; transposase, IS30 family
D SDSE_1145 tra; Probable transposase for insertion-like sequence element IS1161 K07482 K07482; transposase, IS30 family
D SDSE_1775 Transposase insI for insertion sequence element IS30B/C/D K07482 K07482; transposase, IS30 family
D SDSE_2283 tra; Transposase for insertion sequence element IS1086 K07482 K07482; transposase, IS30 family
D SDSE_0372 tra; Transposase for insertion sequence element IS1086 K07482 K07482; transposase, IS30 family
D SDSE_0382 tra; Transposase for insertion sequence element IS1086 K07482 K07482; transposase, IS30 family
D SDSE_0982 tra; Transposase insI for insertion sequence element IS30B/C/D K07482 K07482; transposase, IS30 family
D SDSE_0017 Probable transposase for insertion-like sequence element IS1161 K07482 K07482; transposase, IS30 family
D SDSE_0019 tra; Probable transposase for insertion-like sequence element IS1161 K07482 K07482; transposase, IS30 family
D SDSE_2076 Probable transposase for insertion-like sequence element IS1161 K07482 K07482; transposase, IS30 family
D SDSE_2080 tra; Transposase for insertion sequence element IS1086 K07482 K07482; transposase, IS30 family
D SDSE_2114 Probable transposase for insertion-like sequence element IS1161 K07482 K07482; transposase, IS30 family
D SDSE_1319 K07483 transposase K07483 K07483; transposase
D SDSE_1345 Transposase insN for insertion sequence element IS911A K07483 K07483; transposase
D SDSE_1239 Transposase insN for insertion sequence element IS911A K07483 K07483; transposase
D SDSE_1241 Transposase insN for insertion sequence element IS911A K07483 K07483; transposase
D SDSE_1411 Transposase insN for insertion sequence element IS911A K07483 K07483; transposase
D SDSE_2115 Transposase insN for insertion sequence element IS911A K07483 K07483; transposase
D SDSE_0961 ISSag4, transposase orfA K07483 K07483; transposase
D SDSE_1203 K07483 transposase K07483 K07483; transposase
D SDSE_0675 Transposase insN for insertion sequence element IS911A K07483 K07483; transposase
D SDSE_1061 K07483 transposase K07483 K07483; transposase
D SDSE_1691 Transposase insN for insertion sequence element IS911A K07483 K07483; transposase
D SDSE_1969 Insertion element IS1397 uncharacterized 20.1 kDa protein K07483 K07483; transposase
D SDSE_0540 Transposase insN for insertion sequence element IS911A K07483 K07483; transposase
D SDSE_0672 tra; Insertion element IS1397 uncharacterized 20.1 kDa protein K07483 K07483; transposase
D SDSE_0698 transposase K07483 K07483; transposase
D SDSE_1063 tnpA; transposase K07483 K07483; transposase
D SDSE_1316 transposase K07483 K07483; transposase
D SDSE_0215 tra; Transposase for insertion sequence element IS1557 K07485 K07485; transposase
D SDSE_0303 Transposase for insertion sequence element IS1557 K07485 K07485; transposase
D SDSE_1012 Probable family 20 transposase K07486 K07486; transposase
D SDSE_1635 Probable family 20 transposase K07486 K07486; transposase
D SDSE_1647 transposase K07486 K07486; transposase
D SDSE_0653 transposase K07486 K07486; transposase
D SDSE_0671 tra; Transposase for insertion sequence element IS629 K07497 K07497; putative transposase
D SDSE_1155 tra; Transposase insF for insertion sequence IS3fB K07497 K07497; putative transposase
D SDSE_1971 tra; Transposase for insertion sequence element IS629 K07497 K07497; putative transposase
D SDSE_0209 tra; Gag-Pol polyprotein K07497 K07497; putative transposase
D SDSE_0210 Transposase for insertion sequence element IS3411 K07497 K07497; putative transposase
D SDSE_1240 Putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D SDSE_1242 Putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D SDSE_1410 Transposase insF for insertion sequence IS3A/B/C/D/E/fA K07497 K07497; putative transposase
D SDSE_0673 tra; Transposase insF for insertion sequence IS3A/B/C/D/E/fA K07497 K07497; putative transposase
D SDSE_0674 Insertion element IS600 uncharacterized 31 kDa protein K07497 K07497; putative transposase
D SDSE_0697 tnpA; Transposase insF for insertion sequence IS3fB K07497 K07497; putative transposase
D SDSE_1062 tnpA; Putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D SDSE_1690 Transposase insF for insertion sequence IS3A/B/C/D/E/fA K07497 K07497; putative transposase
D SDSE_0538 tra; Transposase insF for insertion sequence IS3A/B/C/D/E/fA K07497 K07497; putative transposase
D SDSE_0539 Insertion element IS600 uncharacterized 31 kDa protein K07497 K07497; putative transposase
D SDSE_1317 tnpA; Putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D SDSE_1320 Putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D SDSE_1321 tra; Gag-Pol polyprotein K07497 K07497; putative transposase
D SDSE_1346 Transposase insF for insertion sequence IS3A/B/C/D/E/fA K07497 K07497; putative transposase
D SDSE_0959 tra; Transposase insF for insertion sequence IS3A/B/C/D/E/fA K07497 K07497; putative transposase
D SDSE_0960 Insertion element IS600 uncharacterized 31 kDa protein K07497 K07497; putative transposase
D SDSE_1202 tra; Transposase for insertion sequence element IS629 K07497 K07497; putative transposase
D SDSE_2116 Transposase insF for insertion sequence IS3A/B/C/D/E/fA K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D SDSE_1999 UPF0133 protein ESA_02800 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SDSE_1812 cycA; High-affinity glutamine permease K03293 TC.AAT; amino acid transporter, AAT family
D SDSE_0016 Uncharacterized amino acid permease yfnA K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SDSE_1021 citM; Citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D SDSE_1118 Uncharacterized transporter HI0883 K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SDSE_0403 braB; Branched-chain amino acid transport system 2 carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D SDSE_0495 brnQ; Putative branched-chain amino acid carrier protein SSP1343 K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D SDSE_1801 hypothetical protein K20073 mapZ; mid-cell-anchored protein Z
D SDSE_2052 Protein jag K06346 jag; spoIIIJ-associated protein
D SDSE_1326 ccrB; Uncharacterized protein y4bA/y4pH K06400 spoIVCA; site-specific DNA recombinase
D SDSE_1493 Uncharacterized protein y4bA/y4pH K06400 spoIVCA; site-specific DNA recombinase
D SDSE_1494 Uncharacterized protein y4bA/y4pH K06400 spoIVCA; site-specific DNA recombinase
D SDSE_1554 Putative DNA recombinase K06400 spoIVCA; site-specific DNA recombinase
D SDSE_1359 Uncharacterized protein y4bA/y4pH K06400 spoIVCA; site-specific DNA recombinase
D SDSE_1360 Putative DNA recombinase K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D SDSE_1623 typA; K06207 GTP-binding protein K06207 typA; GTP-binding protein
D SDSE_0527 phoH; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D SDSE_0651 K07273 lysozyme K07273 acm; lysozyme
C 99994 Others
D SDSE_0625 phoU; Phosphate transport system protein phoU K02039 phoU; phosphate transport system protein
D SDSE_1090 phoU; Phosphate transport system protein phoU K02039 phoU; phosphate transport system protein
D SDSE_0474 cutC; Copper homeostasis protein cutC K06201 cutC; copper homeostasis protein
D SDSE_0482 Immunity protein sdpI K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SDSE_2177 Mvi; Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase K03810 mviM; virulence factor
D SDSE_0731 elaA; K02348 ElaA protein K02348 elaA; ElaA protein
D SDSE_1482 coiA; K06198 competence protein CoiA K06198 coiA; competence protein CoiA
D SDSE_0152 Phenylalanyl-tRNA synthetase beta chain K06878 K06878; tRNA-binding protein
D SDSE_0644 Phosphoglycolate phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D SDSE_0364 sufB; UPF0051 protein SAS0788 K09014 sufB; Fe-S cluster assembly protein SufB
D SDSE_0361 sufD; Protein NAP1, chloroplastic K09015 sufD; Fe-S cluster assembly protein SufD
D SDSE_1432 K07058 K07058 K07058; membrane protein
D SDSE_1271 UPF0176 protein SPD_0091 K07146 K07146; UPF0176 protein
D SDSE_0479 Protein phnB K04750 phnB; PhnB protein
D SDSE_0408 lemA; Uncharacterized protein MJ1576 K03744 lemA; LemA protein
D SDSE_0628 K03095 SprT-like protein K03095 sprL; SprT-like protein
D SDSE_2220 Uncharacterized protein yhgE K01421 yhgE; putative membrane protein
D SDSE_2215 K08974 putative membrane protein K08974 K08974; putative membrane protein
D SDSE_0615 UPF0703 protein ycgQ K08986 ycgQ; putative membrane protein
D SDSE_1126 K06193 phosphonoacetate hydrolase K06193 phnA; protein PhnA
C 99997 Function unknown
D SDSE_0199 Anaerobic sulfatase-maturating enzyme homolog ydeM K06871 K06871; uncharacterized protein
D SDSE_0680 Uncharacterized protein MG461 K06885 K06885; uncharacterized protein
D SDSE_0346 K06889 K06889 K06889; uncharacterized protein
D SDSE_0429 Uncharacterized protein yrjE K06890 K06890; uncharacterized protein
D SDSE_2095 Uncharacterized protein yneT K06929 K06929; uncharacterized protein
D SDSE_1185 K06940 K06940 K06940; uncharacterized protein
D SDSE_0428 2',3'-cyclic-nucleotide 2'-phosphodiesterase K06950 K06950; uncharacterized protein
D SDSE_1197 yagB; Uncharacterized protein ypgQ K06950 K06950; uncharacterized protein
D SDSE_0844 UPF0109 protein BH2482 K06960 K06960; uncharacterized protein
D SDSE_0281 Uncharacterized protein yacP K06962 K06962; uncharacterized protein
D SDSE_0755 K07004 K07004 K07004; uncharacterized protein
D SDSE_1995 Pyridoxine/pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D SDSE_0849 K07035 K07035 K07035; uncharacterized protein
D SDSE_1035 K07035 K07035 K07035; uncharacterized protein
D SDSE_0782 Uncharacterized protein ypfJ K07054 K07054; uncharacterized protein
D SDSE_0616 UPF0718 protein ycgR K07089 K07089; uncharacterized protein
D SDSE_1180 UPF0718 protein yraQ K07089 K07089; uncharacterized protein
D SDSE_0434 Putative metallophosphoesterase ysnB K07095 K07095; uncharacterized protein
D SDSE_1576 Uncharacterized protein yrxA K07105 K07105; uncharacterized protein
D SDSE_1024 Protein abrB K07120 K07120; uncharacterized protein
D SDSE_1261 K07124 K07124 K07124; uncharacterized protein
D SDSE_0444 K07139 K07139 K07139; uncharacterized protein
D SDSE_0192 Uncharacterized protein yyaS K07149 K07149; uncharacterized protein
D SDSE_2072 Uncharacterized protein yyaS K07149 K07149; uncharacterized protein
D SDSE_0440 UPF0161 protein SPD_1653 K08998 K08998; uncharacterized protein
D SDSE_1741 Meiotically up-regulated gene 157 protein K09704 K09704; uncharacterized protein
D SDSE_0618 Uncharacterized protein YML079W K09705 K09705; uncharacterized protein
D SDSE_0989 ylxM; UPF0122 protein EF_1701 K09787 K09787; uncharacterized protein
D SDSE_0521 Conserved virulence factor B K00243 K00243; uncharacterized protein
D SDSE_2174 yaaA; UPF0246 protein VV1_0535 K09861 K09861; uncharacterized protein
D SDSE_0254 K09962 hypothetical protein K09962 K09962; uncharacterized protein
D SDSE_0430 UPF0154 protein gbs1650 K09976 K09976; uncharacterized protein
D SDSE_0826 Uncharacterized protein ysxB K07584 ysxB; uncharacterized protein
D SDSE_1761 UPF0374 protein llmg_1550 K07586 ygaC; uncharacterized protein
D SDSE_1871 Uncharacterized protein ylxR K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 30, 2024