+D GENES KO #

  KEGG Orthology (KO) - Shewanella denitrificans

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:sdn00010] D Sden_2735 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Sden_2986 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Sden_1086 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Sden_1003 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Sden_1791 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Sden_1793 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Sden_1085 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Sden_3698 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Sden_1196 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Sden_2081 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Sden_2009 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Sden_3383 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Sden_3382 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Sden_3381 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Sden_3767 Alcohol dehydrogenase, zinc-binding K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Sden_2000 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Sden_2578 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Sden_2339 Aldehyde dehydrogenase (NAD+) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Sden_2044 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Sden_0413 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Sden_1985 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Sden_2109 Aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D Sden_0117 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Sden_1816 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Sden_1548 PTS system, glucose-like IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:sdn00020] D Sden_2189 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Sden_3377 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Sden_1831 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Sden_2561 Isocitrate dehydrogenase (NAD+) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D Sden_2183 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Sden_2182 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Sden_3381 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Sden_2180 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Sden_2181 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Sden_2185 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Sden_2184 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Sden_2187 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Sden_2186 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Sden_1912 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Sden_1650 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Sden_0826 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Sden_0117 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Sden_3383 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Sden_3382 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:sdn00030] D Sden_2735 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Sden_2079 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Sden_2078 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D Sden_1935 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Sden_0267 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Sden_1083 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Sden_2734 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Sden_1092 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Sden_2731 Phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D Sden_1025 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Sden_0939 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D Sden_1027 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Sden_1985 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Sden_0916 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Sden_2077 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D Sden_2076 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Sden_1086 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Sden_2986 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:sdn00040] D Sden_2596 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Sden_0267 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:sdn00051] D Sden_2603 N-acetylglucosamine kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Sden_1966 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Sden_2986 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Sden_1086 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Sden_1003 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Sden_3378 HAD-superfamily hydrolase subfamily IA, variant 3 K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68] C 00052 Galactose metabolism [PATH:sdn00052] D Sden_0413 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Sden_0414 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Sden_2597 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Sden_2644 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Sden_2596 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Sden_1985 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Sden_2002 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Sden_2028 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:sdn00500] D Sden_2002 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Sden_2028 alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Sden_2596 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Sden_2605 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Sden_2607 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Sden_2657 Nucleotidyl transferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Sden_1800 alpha amylase, catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1] D Sden_2004 Glucan 1,4-alpha-glucosidase K01178 SGA1; glucoamylase [EC:3.2.1.3] D Sden_1816 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Sden_1985 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Sden_2735 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Sden_2603 N-acetylglucosamine kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sdn00520] D Sden_2136 chitinase. Glycosyl Hydrolase family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D Sden_2070 glycoside hydrolase, family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D Sden_3140 Chitinase K20547 CHIB; basic endochitinase B [EC:3.2.1.14] D Sden_1945 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Sden_0553 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Sden_1816 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Sden_2704 N-acetylglucosamine 6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Sden_2706 ATPase, BadF/BadG/BcrA/BcrD type K18676 gspK; glucosamine kinase [EC:2.7.1.8] D Sden_2603 N-acetylglucosamine kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Sden_2705 Glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Sden_3743 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Sden_1002 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Sden_3748 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Sden_2812 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D Sden_1950 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D Sden_2884 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D Sden_2883 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D Sden_0502 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Sden_0153 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Sden_2659 WxcM-like protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D Sden_1286 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Sden_1283 putative polysaccharide biosynthesis protein K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Sden_1288 acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] D Sden_1548 PTS system, glucose-like IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D Sden_1985 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Sden_2596 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Sden_0414 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Sden_2597 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Sden_2644 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Sden_2735 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Sden_1966 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Sden_2657 Nucleotidyl transferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Sden_2656 NAD-dependent epimerase/dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] C 00620 Pyruvate metabolism [PATH:sdn00620] D Sden_2044 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Sden_3383 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Sden_3382 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Sden_3381 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Sden_2406 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Sden_2000 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Sden_2578 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Sden_3767 Alcohol dehydrogenase, zinc-binding K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Sden_2409 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Sden_2410 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Sden_2081 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Sden_2339 Aldehyde dehydrogenase (NAD+) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Sden_3047 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D Sden_1873 Glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Sden_2021 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Sden_0736 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Sden_3353 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Sden_0826 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Sden_1912 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Sden_1650 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Sden_0248 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Sden_0117 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Sden_2009 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Sden_1245 Malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D Sden_1943 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Sden_0334 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sdn00630] D Sden_1246 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D Sden_2044 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Sden_1245 Malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D Sden_0826 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Sden_2189 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Sden_3377 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Sden_1943 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Sden_2881 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Sden_2300 HAD-superfamily hydrolase subfamily IA, variant 3 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Sden_0268 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Sden_0404 alanine-glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Sden_0552 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Sden_3032 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Sden_3454 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Sden_0631 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Sden_1142 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Sden_0835 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Sden_0833 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Sden_3381 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Sden_0834 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Sden_2076 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Sden_1549 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:sdn00640] D Sden_2044 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Sden_2409 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Sden_2410 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Sden_1786 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Sden_1787 Transketolase, central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Sden_3017 branched-chain alpha-keto acid dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Sden_1788 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Sden_3381 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Sden_2406 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Sden_0015 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Sden_1530 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Sden_0910 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Sden_2181 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Sden_2180 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Sden_1942 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Sden_1665 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D Sden_1666 aconitase K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D Sden_1667 methylitaconate delta2-delta3-isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D Sden_3377 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Sden_1664 2,3-dimethylmalate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D Sden_1715 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] C 00650 Butanoate metabolism [PATH:sdn00650] D Sden_1943 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Sden_0015 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Sden_1530 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Sden_2487 short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Sden_2000 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Sden_2185 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Sden_2184 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Sden_2187 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Sden_2186 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Sden_0910 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Sden_0909 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Sden_2406 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Sden_2250 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Sden_2251 3-oxoacid CoA-transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D Sden_2252 butyryl-CoA:acetate CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D Sden_3414 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Sden_2122 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Sden_2123 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Sden_3413 acetolactate synthase, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:sdn00660] D Sden_3414 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Sden_2122 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Sden_2123 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Sden_3413 acetolactate synthase, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D Sden_2181 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Sden_2180 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Sden_0336 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Sden_0337 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Sden_0335 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:sdn00562] D Sden_1454 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Sden_1942 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Sden_1003 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:sdn00190] D Sden_2710 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Sden_2185 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Sden_2184 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Sden_2187 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Sden_2186 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Sden_3201 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Sden_3200 cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Sden_3199 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Sden_3524 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Sden_3520 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D Sden_1977 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D Sden_3518 Cytochrome-c oxidase K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D Sden_3517 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D Sden_3519 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D Sden_3523 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Sden_1851 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Sden_1850 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Sden_1849 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D Sden_1848 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Sden_1274 cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Sden_1275 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Sden_1276 Cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D Sden_3754 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Sden_3752 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Sden_3753 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Sden_3755 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Sden_3751 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Sden_3758 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Sden_3756 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Sden_3757 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Sden_0478 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:sdn00710] D Sden_1085 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Sden_1791 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Sden_1793 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Sden_1086 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Sden_2986 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Sden_1083 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Sden_1092 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Sden_3188 Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D Sden_1003 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Sden_0267 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Sden_2734 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Sden_0248 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Sden_0117 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Sden_3353 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Sden_0826 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:sdn00720] D Sden_2009 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Sden_0248 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Sden_0826 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Sden_1912 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Sden_1650 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Sden_2185 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Sden_2184 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Sden_2187 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Sden_2186 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Sden_2180 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Sden_2181 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Sden_1943 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Sden_1831 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Sden_3377 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Sden_2497 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Sden_0642 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Sden_2410 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Sden_2409 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Sden_2044 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:sdn00680] D Sden_3767 Alcohol dehydrogenase, zinc-binding K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Sden_3766 Carboxylesterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D Sden_0631 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Sden_1142 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Sden_0404 alanine-glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Sden_0552 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Sden_2881 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Sden_1196 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Sden_0248 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Sden_0826 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Sden_1086 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Sden_2986 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Sden_2409 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Sden_2410 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Sden_2044 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Sden_2009 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Sden_3698 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Sden_3097 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Sden_1947 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Sden_1032 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:sdn00910] D Sden_3714 Nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Sden_1497 periplasmic nitrate reductase subunit NapA apoprotein K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D Sden_1498 periplasmic nitrate reductase subunit NapB K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D Sden_3718 molybdopterin oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D Sden_3716 assimilatory nitrite reductase (NAD(P)H) large subunit precursor K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D Sden_3715 assimilatory nitrite reductase (NAD(P)H) small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D Sden_3482 Nitrite reductase, copper containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D Sden_1980 cytochrome c oxidase, subunit I K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D Sden_1981 Nitric-oxide reductase K02305 norC; nitric oxide reductase subunit C D Sden_2219 Twin-arginine translocation pathway signal K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4] D Sden_1729 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Sden_3032 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Sden_3454 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Sden_2790 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Sden_2791 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Sden_1811 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:sdn00920] D Sden_0960 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Sden_0959 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Sden_0962 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Sden_2611 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Sden_0225 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Sden_0934 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Sden_0932 sulfite reductase (NADPH) alpha subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D Sden_0933 sulfite reductase (NADPH) beta subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D Sden_3617 Rhodanese-like protein K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D Sden_1456 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Sden_2520 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Sden_2013 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Sden_2588 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Sden_0615 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Sden_1761 acyl-CoA dehydrogenase-like protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:sdn00061] D Sden_2292 acyl carrier protein K02078 acpP; acyl carrier protein D Sden_3111 conserved hypothetical protein K02078 acpP; acyl carrier protein D Sden_2294 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Sden_2295 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Sden_1381 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Sden_3119 3-oxoacyl-(acyl-carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Sden_3120 3-oxoacyl-(acyl-carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Sden_1482 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Sden_2291 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Sden_1937 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Sden_2293 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Sden_3106 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Sden_2465 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D Sden_1565 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Sden_2487 short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Sden_0072 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_1625 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_2934 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_3437 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_3736 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:sdn00071] D Sden_1943 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Sden_1529 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Sden_0014 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Sden_0015 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Sden_1530 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Sden_1764 acyl-CoA dehydrogenase-like protein K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D Sden_2115 acyl-CoA dehydrogenase-like protein K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D Sden_3018 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Sden_0072 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_1625 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_2934 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_3437 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_3736 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_3466 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D Sden_3767 Alcohol dehydrogenase, zinc-binding K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Sden_2000 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Sden_2578 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:sdn00561] D Sden_0342 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Sden_3514 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Sden_2296 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Sden_2829 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Sden_0530 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Sden_0801 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Sden_2308 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Sden_1098 alpha/beta hydrolase fold K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D Sden_0603 lipase, class 3 K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:sdn00564] D Sden_3695 Glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Sden_0369 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Sden_3514 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Sden_2829 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Sden_0530 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Sden_0801 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Sden_2308 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Sden_0955 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Sden_3669 alpha/beta hydrolase fold K01048 pldB; lysophospholipase [EC:3.1.1.5] D Sden_3215 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Sden_0469 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Sden_1073 Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D Sden_1072 Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D Sden_1559 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Sden_1779 phospholipase D/Transphosphatidylase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Sden_2859 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Sden_3214 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Sden_1438 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Sden_1150 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] C 00565 Ether lipid metabolism [PATH:sdn00565] D Sden_0955 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism [PATH:sdn00600] D Sden_0553 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism [PATH:sdn00590] D Sden_0955 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Sden_1680 Arachidonate 15-lipoxygenase K19246 loxA; arachidonate 15-lipoxygenase [EC:1.13.11.33] C 00591 Linoleic acid metabolism D Sden_0955 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:sdn00592] D Sden_0955 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Sden_1529 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Sden_0014 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:sdn01040] D Sden_0229 Delta-9 acyl-phospholipid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D Sden_2368 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Sden_1670 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:sdn00230] D Sden_3224 Nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Sden_0224 NUDIX hydrolase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D Sden_1027 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Sden_1985 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Sden_0916 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Sden_1490 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Sden_3406 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Sden_2095 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Sden_1273 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Sden_2094 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Sden_1223 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Sden_1224 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Sden_3063 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Sden_1826 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Sden_3407 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Sden_2382 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Sden_1252 5'-Nucleotidase-like protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Sden_2137 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Sden_1201 exopolyphosphatase / 5'-nucleotidase / 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Sden_1840 HAD-superfamily hydrolase, subfamily IIA K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Sden_0222 HAD-superfamily hydrolase subfamily IA, variant 3 K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D Sden_1431 inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73] D Sden_1028 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Sden_1472 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Sden_2862 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Sden_0654 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Sden_1269 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Sden_2390 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Sden_0756 protein of unknown function DUF84 K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D Sden_2686 Ham1-like protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Sden_1270 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Sden_3433 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Sden_1952 ribonucleoside-diphosphate reductase class Ia alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Sden_1953 ribonucleoside-diphosphate reductase class Ia beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Sden_1419 ribonucleoside-triphosphate reductase / ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Sden_1995 Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Sden_1994 metal dependent phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Sden_3435 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Sden_0450 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Sden_1193 (p)ppGpp synthetase I, SpoT/RelA K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D Sden_2784 adenylate cyclase-related protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Sden_0509 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Sden_3627 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D Sden_2557 conserved hypothetical protein 730 K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D Sden_1596 2, 3 -cyclic-nucleotide 2 -phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D Sden_1430 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Sden_1194 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Sden_3222 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D Sden_2890 Bis(5'nucleosyl)-tetraphosphatase, ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D Sden_0962 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Sden_0960 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Sden_0959 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:sdn00240] D Sden_0996 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Sden_0995 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Sden_2818 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Sden_1679 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Sden_1730 dihydroorotate oxidase A K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D Sden_0320 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Sden_1757 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Sden_1556 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Sden_2390 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Sden_1194 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Sden_3331 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Sden_1415 protein of unknown function DUF45 K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D Sden_1195 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Sden_1752 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Sden_2054 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Sden_1252 5'-Nucleotidase-like protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Sden_2137 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Sden_1201 exopolyphosphatase / 5'-nucleotidase / 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Sden_1840 HAD-superfamily hydrolase, subfamily IIA K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Sden_3427 HAD-superfamily hydrolase, subfamily IA, variant 1 K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D Sden_3074 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D Sden_1472 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Sden_2093 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Sden_1596 2, 3 -cyclic-nucleotide 2 -phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D Sden_0940 Purine nucleosidase K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-] D Sden_2557 conserved hypothetical protein 730 K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D Sden_2288 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Sden_1419 ribonucleoside-triphosphate reductase / ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Sden_1952 ribonucleoside-diphosphate reductase class Ia alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Sden_1953 ribonucleoside-diphosphate reductase class Ia beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Sden_1994 metal dependent phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Sden_0078 CMP/dCMP deaminase, zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Sden_2051 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Sden_1167 Thymidylate kinase-like protein K00943 tmk; dTMP kinase [EC:2.7.4.9] D Sden_0324 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Sden_1026 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D Sden_2536 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D Sden_2779 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:sdn00250] D Sden_1750 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Sden_2773 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Sden_1468 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Sden_1902 L-asparaginases, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Sden_3771 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Sden_3533 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Sden_2075 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Sden_1993 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Sden_0404 alanine-glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Sden_0552 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Sden_1741 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Sden_0253 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Sden_0509 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Sden_1826 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Sden_2818 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Sden_0910 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Sden_0909 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Sden_2790 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Sden_2791 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Sden_1729 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Sden_0689 delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Sden_3032 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Sden_3454 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Sden_0996 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Sden_0995 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Sden_2695 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Sden_2705 Glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Sden_3743 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Sden_1490 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:sdn00260] D Sden_2982 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Sden_2740 homoserine dehydrogenase / aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Sden_0616 homoserine dehydrogenase / aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D Sden_1484 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Sden_2739 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Sden_2738 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Sden_1361 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Sden_0631 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Sden_1142 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Sden_0404 alanine-glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Sden_0552 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Sden_2881 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Sden_3698 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Sden_3097 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Sden_1947 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Sden_1032 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Sden_3615 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Sden_3616 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D Sden_0835 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Sden_0833 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Sden_3381 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Sden_0834 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Sden_1779 phospholipase D/Transphosphatidylase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Sden_2859 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Sden_0715 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D Sden_0714 betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D Sden_1946 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Sden_3411 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Sden_0399 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Sden_1375 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Sden_2455 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Sden_2454 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:sdn00270] D Sden_1456 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Sden_2520 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Sden_2013 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Sden_2313 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Sden_1115 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Sden_0732 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Sden_1082 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Sden_2279 Adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Sden_0699 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Sden_2801 methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Sden_2862 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Sden_0077 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D Sden_1668 aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Sden_2521 Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D Sden_1720 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D Sden_0981 LuxS protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Sden_2982 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Sden_2740 homoserine dehydrogenase / aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Sden_0616 homoserine dehydrogenase / aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D Sden_1484 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Sden_2588 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Sden_0615 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Sden_0823 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Sden_0289 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Sden_1219 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Sden_2975 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Sden_1750 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Sden_1375 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Sden_0826 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Sden_1946 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Sden_3097 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Sden_1947 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:sdn00280] D Sden_0289 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Sden_1823 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D Sden_1786 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Sden_1787 Transketolase, central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Sden_3017 branched-chain alpha-keto acid dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Sden_1788 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Sden_3381 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Sden_2245 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D Sden_0015 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Sden_1530 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Sden_1529 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Sden_0014 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Sden_1938 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D Sden_1942 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Sden_0910 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Sden_2248 3-methylcrotonoyl-CoA carboxylase, alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D Sden_2246 Propionyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D Sden_2247 methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D Sden_2250 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Sden_2251 3-oxoacid CoA-transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D Sden_2252 butyryl-CoA:acetate CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D Sden_1943 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:sdn00290] D Sden_3411 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Sden_0399 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Sden_0336 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Sden_0337 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Sden_0335 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Sden_3414 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Sden_2122 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Sden_2123 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Sden_3413 acetolactate synthase, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D Sden_3415 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Sden_3412 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Sden_0289 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Sden_1823 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D Sden_1993 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Sden_0334 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:sdn00300] D Sden_2982 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Sden_2740 homoserine dehydrogenase / aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Sden_0616 homoserine dehydrogenase / aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D Sden_1484 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Sden_1735 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Sden_0994 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Sden_1551 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D Sden_3193 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Sden_1054 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Sden_1814 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Sden_0391 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Sden_0390 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Sden_0350 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Sden_0351 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:sdn00310] D Sden_2182 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Sden_3381 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Sden_3018 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Sden_0015 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Sden_1530 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Sden_1943 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Sden_1375 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Sden_0910 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Sden_0909 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:sdn00220] D Sden_0252 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Sden_0253 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Sden_2695 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Sden_3032 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Sden_3454 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Sden_0996 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Sden_0995 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Sden_1729 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Sden_1750 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Sden_1993 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Sden_0329 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D Sden_0251 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Sden_0250 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Sden_3193 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Sden_1054 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Sden_0249 hypothetical protein K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:sdn00330] D Sden_2280 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Sden_2278 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Sden_3075 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D Sden_0699 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Sden_2279 Adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Sden_3192 arginine succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D Sden_1055 arginine succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D Sden_2329 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D Sden_1056 succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D Sden_3191 succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D Sden_1785 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D Sden_0908 FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D Sden_3034 aldehyde dehydrogenase (acceptor) K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D Sden_2683 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Sden_0689 delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Sden_0150 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Sden_1180 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Sden_0151 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Sden_1750 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:sdn00340] D Sden_1618 ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Sden_1611 phosphoribosyl-ATP pyrophosphatase / phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Sden_1613 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Sden_1614 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Sden_1612 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Sden_1615 histidinol-phosphate phosphatase / imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D Sden_1616 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Sden_1617 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Sden_0084 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D Sden_0083 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D Sden_0081 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D Sden_0462 Arginase/agmatinase/formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] C 00350 Tyrosine metabolism [PATH:sdn00350] D Sden_1750 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Sden_1616 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Sden_1668 aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Sden_2163 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Sden_2162 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D Sden_2591 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D Sden_2592 fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D Sden_3767 Alcohol dehydrogenase, zinc-binding K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Sden_2000 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Sden_2578 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Sden_1896 hypothetical protein K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D Sden_0909 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:sdn00360] D Sden_2595 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D Sden_1750 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Sden_1616 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Sden_1668 aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Sden_3086 GCN5-related N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D Sden_2163 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Sden_1384 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D Sden_2668 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00380 Tryptophan metabolism [PATH:sdn00380] D Sden_3452 aminotransferase, class V K01556 KYNU; kynureninase [EC:3.7.1.3] D Sden_2182 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Sden_3381 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Sden_3018 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Sden_0015 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Sden_1530 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Sden_1943 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Sden_1384 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sdn00400] D Sden_2901 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Sden_2750 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Sden_2011 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Sden_0262 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Sden_3285 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Sden_0034 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Sden_0261 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Sden_1751 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Sden_1537 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Sden_2450 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Sden_0626 Anthranilate synthase component I and chorismate binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Sden_2451 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Sden_2452 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Sden_2453 phosphoribosylanthranilate isomerase / indole-3-glycerol phosphate synthase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D Sden_2455 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Sden_2454 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Sden_2749 prephenate dehydrogenase / chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D Sden_2747 prephenate dehydratase / chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Sden_0622 DAHP synthetase I/KDSA K04516 AROA1; chorismate mutase [EC:5.4.99.5] D Sden_1750 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Sden_1616 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Sden_1668 aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Sden_2595 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:sdn00410] D Sden_0910 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Sden_3175 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Sden_0015 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Sden_1530 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Sden_1942 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:sdn00430] D Sden_1655 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Sden_1741 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Sden_1729 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Sden_2410 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Sden_2409 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:sdn00440] D Sden_1161 2,3-dimethylmalate lyase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D Sden_1162 thiamine pyrophosphate enzyme-like TPP-binding K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] D Sden_1165 aminotransferase, class V K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] C 00450 Selenocompound metabolism [PATH:sdn00450] D Sden_0615 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Sden_2313 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Sden_1115 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Sden_0732 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Sden_2521 Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D Sden_0753 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Sden_1713 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Sden_0960 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Sden_0959 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Sden_0228 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Sden_2056 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:sdn00460] D Sden_2605 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Sden_2607 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Sden_1655 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Sden_1902 L-asparaginases, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Sden_0631 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Sden_1142 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:sdn00470] D Sden_0522 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Sden_2354 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Sden_1375 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Sden_2695 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Sden_0232 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Sden_0353 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Sden_1468 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Sden_0391 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Sden_0390 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:sdn00480] D Sden_1655 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Sden_1219 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Sden_2975 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Sden_0871 PepA aminopeptidase. Metallo peptidase. MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Sden_3168 PepB aminopeptidase. Metallo peptidase. MEROPS family M17 K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D Sden_1723 Peptidase M1, alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Sden_2915 aminopeptidase N. Metallo peptidase. MEROPS family M01 K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Sden_1011 Xaa-His dipeptidase. Metallo peptidase. MEROPS family M20C K01270 pepD; dipeptidase D [EC:3.4.13.-] D Sden_0739 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Sden_0764 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Sden_3511 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Sden_1385 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Sden_2101 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Sden_3592 NADPH-glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D Sden_1831 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Sden_1935 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Sden_2079 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Sden_2679 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D Sden_2552 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D Sden_3541 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D Sden_3075 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D Sden_0699 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:sdn00511] D Sden_0553 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00540 Lipopolysaccharide biosynthesis [PATH:sdn00540] D Sden_1566 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Sden_0360 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Sden_1564 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Sden_2500 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Sden_1567 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Sden_2198 lipid-A-disaccharide synthase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Sden_0494 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Sden_0925 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Sden_0493 Phosphatase kdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Sden_2666 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Sden_2134 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Sden_3613 Three-deoxy-D-manno-octulosonic-acid transferase-like protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Sden_0708 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Sden_1605 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D Sden_0802 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Sden_3612 lipopolysaccharide kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D Sden_0709 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D Sden_1383 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:sdn00541] D Sden_2596 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Sden_2597 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Sden_2644 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Sden_2662 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Sden_2663 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Sden_2655 conserved hypothetical protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Sden_2548 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Sden_2660 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Sden_2549 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Sden_2661 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Sden_2657 Nucleotidyl transferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Sden_2656 NAD-dependent epimerase/dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Sden_1966 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Sden_3748 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Sden_1286 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Sden_1283 putative polysaccharide biosynthesis protein K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Sden_1288 acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] D Sden_2645 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D Sden_2659 WxcM-like protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] C 00550 Peptidoglycan biosynthesis [PATH:sdn00550] D Sden_0502 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Sden_0153 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Sden_0356 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Sden_0353 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Sden_0350 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Sden_2354 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Sden_0351 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Sden_1558 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Sden_2826 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Sden_0465 phosphoesterase, PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Sden_0352 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Sden_0355 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Sden_1156 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Sden_0255 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Sden_3164 Penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Sden_0855 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Sden_0349 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Sden_0851 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Sden_1778 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:sdn00552] D Sden_2826 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Sden_0465 phosphoesterase, PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Sden_2645 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:sdn00543] D Sden_0580 membrane bound O-acyl transferase, MBOAT K19294 algI; alginate O-acetyltransferase complex protein AlgI D Sden_1456 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:sdn00730] D Sden_1770 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Sden_1771 thiamine-phosphate pyrophosphorylase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D Sden_1772 UBA/THIF-type NAD/FAD binding fold K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D Sden_1458 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Sden_2566 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Sden_1775 Thiazole biosynthesis ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Sden_2571 1-Deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Sden_1774 thiazole biosynthesis K03149 thiG; thiazole synthase [EC:2.8.1.10] D Sden_1149 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Sden_3213 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Sden_2976 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Sden_2371 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Sden_1430 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:sdn00740] D Sden_1447 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Sden_1146 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Sden_1144 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Sden_0394 HAD-superfamily hydrolase subfamily IA, variant 3 K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D Sden_1147 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Sden_1703 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Sden_1145 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Sden_2724 FMN adenylyltransferase / riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Sden_3058 oxidoreductase FAD/NAD(P)-binding K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D Sden_3224 Nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Sden_0655 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:sdn00750] D Sden_2277 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Sden_1170 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Sden_1084 Glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D Sden_1483 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D Sden_1947 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Sden_2887 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D Sden_2763 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D Sden_2738 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:sdn00760] D Sden_2773 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Sden_1789 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Sden_3387 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Sden_1028 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Sden_1252 5'-Nucleotidase-like protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Sden_2137 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Sden_1201 exopolyphosphatase / 5'-nucleotidase / 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Sden_1840 HAD-superfamily hydrolase, subfamily IIA K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Sden_0794 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Sden_1194 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Sden_1432 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Sden_0246 competence/damage-inducible protein cinA K03742 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D Sden_1594 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Sden_2573 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Sden_0931 NAD(P) transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Sden_0930 NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D Sden_0909 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:sdn00770] D Sden_3414 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Sden_2122 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Sden_2123 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Sden_3413 acetolactate synthase, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D Sden_3415 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Sden_3412 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Sden_3174 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Sden_0768 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Sden_1081 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Sden_3175 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Sden_0156 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D Sden_0325 Phosphopantothenoylcysteine decarboxylase / Phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Sden_1194 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Sden_0208 Coenzyme A biosynthesis protein K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Sden_3392 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Sden_2762 phosphopantethiene--protein transferase domain K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Sden_2625 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Sden_1399 protein of unknown function DUF479 K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D Sden_0289 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Sden_2434 Pyridoxal-dependent decarboxylase K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:sdn00780] D Sden_1660 Methyltransferase type 11 K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Sden_1482 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Sden_2291 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Sden_1937 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Sden_2293 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Sden_3106 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Sden_1565 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Sden_3530 bioH protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D Sden_1659 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Sden_1657 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Sden_1661 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Sden_1658 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D Sden_0154 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:sdn00785] D Sden_0868 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Sden_0867 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Sden_3381 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Sden_3383 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Sden_3382 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Sden_2183 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Sden_2182 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Sden_1786 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Sden_1787 Transketolase, central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Sden_3017 branched-chain alpha-keto acid dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Sden_1788 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Sden_0835 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Sden_0833 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Sden_0834 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:sdn00790] D Sden_0321 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Sden_2976 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Sden_2371 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Sden_3287 Twin-arginine translocation pathway signal K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Sden_2828 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Sden_3173 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Sden_2827 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Sden_1001 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Sden_2922 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Sden_1487 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Sden_1447 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Sden_1146 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Sden_3196 aminodeoxychorismate synthase, glutamine amidotransferase subunit K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D Sden_1913 aminodeoxychorismate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D Sden_2053 aminodeoxychorismate lyase apoprotein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D Sden_2361 dihydroneopterin aldolase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D Sden_0827 short-chain dehydrogenase/reductase SDR K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D Sden_2594 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Sden_2595 Phenylalanine 4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D Sden_2014 radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Sden_2015 ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Sden_1513 GTP cyclohydrolase I K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Sden_0101 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Sden_0102 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Sden_0104 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Sden_3688 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Sden_0114 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Sden_2225 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D Sden_0213 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:sdn00670] D Sden_2922 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Sden_0827 short-chain dehydrogenase/reductase SDR K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D Sden_2497 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Sden_0631 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Sden_1142 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Sden_2095 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Sden_3407 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Sden_0023 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Sden_0833 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Sden_1115 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Sden_2779 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Sden_1549 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D Sden_0642 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Sden_0828 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:sdn00860] D Sden_2533 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Sden_0919 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Sden_2819 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Sden_0303 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Sden_0452 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Sden_0388 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Sden_0387 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Sden_0468 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Sden_0030 Coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D Sden_3626 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D Sden_0019 Protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Sden_2678 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D Sden_0386 protein of unknown function DUF513, hemX K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Sden_0958 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Sden_3717 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Sden_1407 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Sden_3524 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Sden_3523 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Sden_1119 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Sden_2802 CobD-related protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Sden_1118 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Sden_0792 pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D Sden_0990 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D Sden_0991 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sdn00130] D Sden_0095 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D Sden_0483 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Sden_3059 3-octaprenyl-4hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D Sden_0655 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Sden_0832 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D Sden_1949 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D Sden_0831 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D Sden_0461 demethylmenaquinone methyltransferase / 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Sden_0817 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D Sden_3092 Phenylacetic acid degradation-related protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D Sden_1669 1,4-Dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Sden_1799 NAD(P)H dehydrogenase (quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Sden_2163 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:sdn00900] D Sden_2571 1-Deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Sden_1560 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Sden_1198 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Sden_0917 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Sden_1199 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Sden_1256 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Sden_2720 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Sden_1943 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Sden_1166 aspartate/glutamate/uridylate kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26] D Sden_0655 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Sden_2570 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Sden_2928 Trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Sden_1558 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:sdn00907] D Sden_0015 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Sden_1530 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Sden_2250 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Sden_1529 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Sden_0014 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Sden_1083 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products D Sden_2195 beta-lactamase-like protein K05555 actIV; cyclase [EC:4.-.-.-] C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:sdn00523] D Sden_2662 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Sden_2663 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Sden_2655 conserved hypothetical protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Sden_2548 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Sden_2660 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Sden_2549 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Sden_2661 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:sdn01054] D Sden_1468 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides D Sden_0634 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] C 01055 Biosynthesis of vancomycin group antibiotics D Sden_2663 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:sdn00946] D Sden_2605 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Sden_2607 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D Sden_3735 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:sdn00332] D Sden_0150 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Sden_1180 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Sden_0151 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:sdn00261] D Sden_0960 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Sden_0959 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Sden_2982 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Sden_2740 homoserine dehydrogenase / aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Sden_0616 homoserine dehydrogenase / aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D Sden_1484 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Sden_1735 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Sden_0994 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:sdn00521] D Sden_1985 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Sden_1454 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Sden_2662 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Sden_2663 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Sden_2655 conserved hypothetical protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Sden_2548 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Sden_2660 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Sden_2549 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Sden_2661 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:sdn00525] D Sden_2662 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Sden_2663 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:sdn00401] D Sden_2749 prephenate dehydrogenase / chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D Sden_1750 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Sden_1616 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Sden_1668 aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis D Sden_2030 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Sden_2707 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] C 00405 Phenazine biosynthesis D Sden_2450 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Sden_0626 Anthranilate synthase component I and chorismate binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Sden_2451 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Sden_2294 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Sden_1937 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Sden_2293 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Sden_3106 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics [PATH:sdn00998] D Sden_2292 acyl carrier protein K02078 acpP; acyl carrier protein D Sden_3111 conserved hypothetical protein K02078 acpP; acyl carrier protein D Sden_0590 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140] D Sden_0589 ornithine cyclodeaminase K21721 sbnB; N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase [EC:1.5.1.51] D Sden_1161 2,3-dimethylmalate lyase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D Sden_1162 thiamine pyrophosphate enzyme-like TPP-binding K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] C 00999 Biosynthesis of various plant secondary metabolites [PATH:sdn00999] D Sden_1082 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Sden_0034 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Sden_2605 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Sden_2607 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites [PATH:sdn00997] D Sden_0590 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140] D Sden_0589 ornithine cyclodeaminase K21721 sbnB; N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase [EC:1.5.1.51] D Sden_0584 Orn/DAP/Arg decarboxylase 2 K23373 sbnH; 2-[(L-alanin-3-ylcarbamoyl)methyl]-2-hydroxybutanedioate decarboxylase [EC:4.1.1.117] D Sden_0588 putative siderophore biosynthesis protein K23375 sbnC; staphyloferrin B synthase [EC:6.3.2.56] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:sdn00362] D Sden_1529 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Sden_0014 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Sden_2668 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Sden_0762 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Sden_1463 Ferredoxin, 2Fe-2S type K04755 fdx; ferredoxin, 2Fe-2S D Sden_1530 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Sden_0015 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Sden_3018 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Sden_1943 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D Sden_0655 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:sdn00364] D Sden_3046 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:sdn00625] D Sden_2578 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Sden_3767 Alcohol dehydrogenase, zinc-binding K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Sden_2000 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:sdn00361] D Sden_3046 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:sdn00623] D Sden_3046 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:sdn00622] D Sden_0762 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Sden_2668 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00633 Nitrotoluene degradation [PATH:sdn00633] D Sden_1230 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D Sden_1529 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Sden_0014 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:sdn00643] D Sden_2162 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D Sden_2591 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D Sden_2592 fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:sdn00930] D Sden_0015 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Sden_1530 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:sdn00621] D Sden_0762 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Sden_2668 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00626 Naphthalene degradation [PATH:sdn00626] D Sden_2578 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Sden_3767 Alcohol dehydrogenase, zinc-binding K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Sden_2000 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:sdn03020] D Sden_0163 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Sden_0164 DNA-directed RNA polymerase, subunit beta-prime K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Sden_0195 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Sden_3434 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:sdn03010] D Sden_1753 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Sden_1554 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Sden_0176 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Sden_0194 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Sden_0187 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Sden_0515 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D Sden_0166 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Sden_0184 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Sden_0507 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Sden_0169 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Sden_0193 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Sden_0165 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Sden_0192 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Sden_0183 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Sden_1010 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Sden_2754 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Sden_0179 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Sden_0517 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Sden_0174 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Sden_2726 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Sden_2831 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Sden_0160 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Sden_0173 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Sden_0170 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Sden_0171 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Sden_0182 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Sden_0185 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Sden_0162 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Sden_0518 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Sden_0161 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Sden_0159 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Sden_0506 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Sden_0180 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Sden_0189 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Sden_0177 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Sden_0196 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Sden_0186 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Sden_2751 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Sden_1708 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Sden_2927 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Sden_0175 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Sden_0172 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Sden_0181 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Sden_1503 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Sden_2926 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Sden_0327 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Sden_0178 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Sden_0188 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Sden_3354 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Sden_2297 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D Sden_0328 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Sden_3778 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D Sden_1707 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Sden_0191 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Sden_R0044 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0119 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0127 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0107 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0122 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0126 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0116 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0016 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0106 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0047 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0121 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0115 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0125 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0105 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0011 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0120 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0017 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0048 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:sdn00970] D Sden_R0096 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Sden_R0094 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Sden_R0009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Sden_R0117 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Sden_R0046 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Sden_R0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0086 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0041 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0037 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0043 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0069 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Sden_R0071 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Sden_R0072 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Sden_R0070 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Sden_R0068 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Sden_R0018 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Sden_R0124 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Sden_R0114 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Sden_R0056 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Sden_R0065 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Sden_R0028 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Sden_R0032 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Sden_R0029 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Sden_R0095 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Sden_R0101 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Sden_R0097 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Sden_R0098 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Sden_R0099 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Sden_R0100 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Sden_R0055 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Sden_R0111 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Sden_R0112 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Sden_R0064 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Sden_R0113 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Sden_R0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Sden_R0020 tRNA-His K14226 tRNA-His; tRNA His D Sden_R0085 tRNA-His K14226 tRNA-His; tRNA His D Sden_R0008 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Sden_R0118 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Sden_R0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Sden_R0023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0109 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0057 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0066 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0049 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Sden_R0051 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Sden_R0053 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Sden_R0052 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Sden_R0050 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Sden_R0054 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Sden_R0030 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0026 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0104 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0034 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0079 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0080 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0081 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0082 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0102 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Sden_R0108 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Sden_R0021 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Sden_R0087 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Sden_R0022 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Sden_R0078 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Sden_R0059 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Sden_R0067 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Sden_R0084 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Sden_R0036 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Sden_R0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Sden_R0073 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Sden_R0012 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Sden_R0004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Sden_R0103 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Sden_R0110 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Sden_R0005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Sden_R0074 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Sden_R0075 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Sden_R0076 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Sden_R0061 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0062 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0088 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0089 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0093 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0091 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0090 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0092 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_2533 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Sden_2413 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Sden_1213 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Sden_1887 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Sden_1958 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Sden_0009 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Sden_0008 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Sden_1705 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Sden_1747 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Sden_2498 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Sden_2056 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Sden_0023 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Sden_2867 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Sden_0797 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Sden_2723 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Sden_3127 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Sden_3357 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Sden_2544 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Sden_1257 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Sden_1602 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Sden_1603 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Sden_2810 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Sden_0269 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:sdn03060] D Sden_0190 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Sden_0157 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Sden_1004 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Sden_1403 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Sden_1404 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Sden_1402 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Sden_3775 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Sden_0363 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Sden_3696 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Sden_2755 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Sden_R0083 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Sden_3505 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Sden_0458 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Sden_0457 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB D Sden_0456 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D Sden_2462 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D Sden_2767 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D Sden_2722 signal peptidase II. Aspartic peptidase. MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:sdn04122] D Sden_1458 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Sden_0013 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Sden_1648 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Sden_1806 DsrH like protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B D Sden_1807 DsrE-like protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C D Sden_1808 DsrE-like protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Sden_1805 DsrC-like protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Sden_1828 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Sden_0104 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Sden_0101 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Sden_0103 molybdopterin synthase subunit MoaD K03636 moaD; sulfur-carrier protein D Sden_0113 [molybdopterin synthase] sulfurylase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Sden_0102 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Sden_3688 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Sden_2566 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Sden_1773 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Sden_1772 UBA/THIF-type NAD/FAD binding fold K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:sdn03018] D Sden_2782 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Sden_2302 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Sden_0449 DEAD/DEAH box helicase-like protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Sden_1196 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Sden_1019 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Sden_3026 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_0891 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_0886 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_1184 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_2529 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_2576 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_2952 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_0511 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Sden_3317 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Sden_1782 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Sden_0332 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Sden_0447 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Sden_1182 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Sden_0422 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Sden_3205 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Sden_3172 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:sdn03030] D Sden_3773 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Sden_2018 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Sden_1569 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Sden_2381 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Sden_2050 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Sden_0795 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Sden_2866 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Sden_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Sden_0521 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Sden_2833 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Sden_3313 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Sden_2019 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Sden_0758 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Sden_1568 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Sden_3620 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Sden_2514 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:sdn03410] D Sden_1869 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Sden_2929 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Sden_2698 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Sden_0210 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Sden_2531 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Sden_0010 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Sden_1465 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Sden_3620 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Sden_0749 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Sden_2514 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:sdn03420] D Sden_1674 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Sden_3315 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Sden_1797 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Sden_1437 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Sden_0484 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Sden_3620 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Sden_2514 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Sden_0291 ERCC4 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] C 03430 Mismatch repair [PATH:sdn03430] D Sden_1207 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Sden_3207 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Sden_2783 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D Sden_0484 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Sden_2287 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Sden_1268 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Sden_2569 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Sden_0749 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Sden_3313 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Sden_1569 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Sden_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Sden_2381 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Sden_0795 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Sden_2050 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Sden_3773 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Sden_2018 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Sden_2866 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Sden_2514 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Sden_0264 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:sdn03440] D Sden_0749 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Sden_3313 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Sden_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Sden_2764 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Sden_1427 recombination protein RecR K06187 recR; recombination protein RecR D Sden_1208 recA protein K03553 recA; recombination protein RecA D Sden_3620 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Sden_1884 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Sden_1883 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Sden_1885 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Sden_3476 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Sden_2352 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Sden_2351 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Sden_2353 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Sden_1569 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Sden_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Sden_2381 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Sden_0795 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Sden_2050 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Sden_3773 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Sden_2018 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Sden_2866 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Sden_3356 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Sden_0516 restart primosome assembly protein PriB K02686 priB; primosomal replication protein N D Sden_2431 primosomal replication protein N'', putative K04067 priC; primosomal replication protein N'' C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:sdn03250] D Sden_0773 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:sdn02010] D Sden_0105 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Sden_0106 Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D Sden_0107 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Sden_3031 extracellular solute-binding protein, family 1 K11073 potF; putrescine transport system substrate-binding protein D Sden_3028 binding-protein-dependent transport systems inner membrane component K11074 potI; putrescine transport system permease protein D Sden_3029 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein D Sden_3030 spermidine/putrescine ABC transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D Sden_0499 toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein D Sden_0498 Mammalian cell entry related K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Sden_0668 Mammalian cell entry related K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Sden_0670 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Sden_0497 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Sden_0500 SpoIIAA family protein K07122 mlaB; phospholipid transport system transporter-binding protein D Sden_0669 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Sden_0496 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Sden_2553 Phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Sden_2584 binding-protein-dependent transport systems inner membrane component K02037 pstC; phosphate transport system permease protein D Sden_2583 Phosphate transport system permease protein 2 K02038 pstA; phosphate transport system permease protein D Sden_2582 Phosphate transport system permease protein 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Sden_1899 Phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein D Sden_1897 binding-protein-dependent transport systems inner membrane component K02042 phnE; phosphonate transport system permease protein D Sden_1898 ABC transporter related K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Sden_2482 extracellular solute-binding protein, family 5 K19226 sapA; cationic peptide transport system substrate-binding protein D Sden_2483 binding-protein-dependent transport systems inner membrane component K19227 sapB; cationic peptide transport system permease protein D Sden_2484 binding-protein-dependent transport systems inner membrane component K19228 sapC; cationic peptide transport system permease protein D Sden_2485 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K19229 sapD; cationic peptide transport system ATP-binding protein D Sden_2486 ABC transporter related K19230 sapF; cationic peptide transport system ATP-binding protein D Sden_2853 periplasmic binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D Sden_0066 transport protein, putative K09696 natB; sodium transport system permease protein D Sden_0067 ABC transporter related K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Sden_1676 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Sden_1678 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Sden_1677 Lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Sden_3572 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D D Sden_3571 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D Sden_3570 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D Sden_3569 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Sden_0872 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein D Sden_0873 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein D Sden_0490 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Sden_2216 conserved hypothetical nitrous oxide metabolic protein K19341 nosY; Cu-processing system permease protein D Sden_2217 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein D Sden_3503 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Sden_3504 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Sden_2199 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Sden_0474 colicin V processing peptidase. Cysteine peptidase. MEROPS family C39 K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Sden_2899 ABC transporter related K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D Sden_2532 ABC transporter related K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D Sden_0383 ABC transporter related K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Sden_0859 ABC transporter related K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Sden_0860 ABC transporter related K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:sdn02060] D Sden_1817 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Sden_1818 Phosphotransferase system, HPr K02784 ptsH; phosphocarrier protein HPr D Sden_1816 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Sden_1548 PTS system, glucose-like IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D Sden_2781 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D Sden_0485 Phosphotransferase system, HPr K08485 ptsO; phosphocarrier protein NPr D Sden_0487 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:sdn03070] D Sden_3225 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein D Sden_0121 type II and III secretion system protein K02453 gspD; general secretion pathway protein D D Sden_0120 type II secretion system protein C K02452 gspC; general secretion pathway protein C D Sden_0123 General secretion pathway protein F K02455 gspF; general secretion pathway protein F D Sden_0124 General secretion pathway protein G K02456 gspG; general secretion pathway protein G D Sden_0125 General secretion pathway protein H K02457 gspH; general secretion pathway protein H D Sden_0126 General secretion pathway protein I K02458 gspI; general secretion pathway protein I D Sden_0127 General secretion pathway protein J K02459 gspJ; general secretion pathway protein J D Sden_0128 General secretion pathway protein K K02460 gspK; general secretion pathway protein K D Sden_0129 General secretion pathway L K02461 gspL; general secretion pathway protein L D Sden_0130 General secretion pathway M protein K02462 gspM; general secretion pathway protein M D Sden_0122 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Sden_1403 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Sden_1404 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Sden_0157 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Sden_1004 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Sden_0190 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Sden_1402 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Sden_3775 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Sden_0363 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Sden_3505 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Sden_3696 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Sden_2755 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Sden_0458 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Sden_0457 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB D Sden_0456 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:sdn02020] D Sden_2688 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Sden_2689 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Sden_2976 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Sden_2371 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Sden_3287 Twin-arginine translocation pathway signal K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Sden_2553 Phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Sden_1263 ATP-binding region, ATPase-like protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Sden_1264 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Sden_3539 ATP-binding region, ATPase-like protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Sden_3538 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Sden_3462 ATP-binding region, ATPase-like protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Sden_3461 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Sden_1906 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Sden_0504 peptidase Do. Serine peptidase. MEROPS family S01B K04771 degP; serine protease Do [EC:3.4.21.107] D Sden_0235 ATP-binding region, ATPase-like protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D Sden_0234 response regulator receiver K07664 baeR; two-component system, OmpR family, response regulator BaeR D Sden_3508 Secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system D Sden_3509 Heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein D Sden_3639 flagellin-like protein K02406 fliC; flagellin D Sden_1314 flagellin-like protein K02406 fliC; flagellin D Sden_1315 flagellin-like protein K02406 fliC; flagellin D Sden_3633 RNA polymerase sigma factor, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Sden_1343 RNA polymerase sigma factor, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Sden_2568 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Sden_3632 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Sden_2984 two component transcriptional regulator, winged helix family K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D Sden_3523 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Sden_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Sden_0558 ATP-binding region, ATPase-like protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D Sden_0736 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Sden_0067 ABC transporter related K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Sden_0066 transport protein, putative K09696 natB; sodium transport system permease protein D Sden_2541 lipoprotein, putative K06080 rcsF; RcsF protein D Sden_1191 Hpt sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Sden_2342 ATP-binding region, ATPase-like protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Sden_1436 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Sden_1214 carbon storage regulator, CsrA / carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Sden_0675 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D Sden_3474 histidine kinase, dimerisation and phosphoacceptor region K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D Sden_3054 histidine kinase, dimerisation and phosphoacceptor region K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D Sden_3475 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR D Sden_2877 protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D Sden_1552 protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D Sden_2711 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Sden_3457 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Sden_3458 nitrogen metabolism transcriptional regulator, NtrC, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Sden_3032 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Sden_3454 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Sden_1943 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Sden_0489 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Sden_3388 methylation K02650 pilA; type IV pilus assembly protein PilA D Sden_3299 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Sden_1302 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Sden_1600 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_0712 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_0099 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_1601 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_1963 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_1091 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_2891 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_2955 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3066 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3100 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3293 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3297 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3298 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW D Sden_1351 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Sden_1350 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Sden_3296 CheW-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Sden_1346 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Sden_3294 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Sden_0659 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Sden_1344 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Sden_3301 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Sden_1347 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Sden_2527 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Sden_2144 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Sden_1301 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Sden_1997 response regulator receiver K11443 divK; two-component system, cell cycle response regulator DivK D Sden_1320 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Sden_1321 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Sden_1322 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC D Sden_3661 sigma-54 factor, interaction region K10943 flrC; two-component system, response regulator FlrC D Sden_3190 cyclic nucleotide-binding K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Sden_2695 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Sden_0601 ATP-binding region, ATPase-like protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Sden_0602 response regulator receiver protein K15012 regA; two-component system, response regulator RegA D Sden_3201 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Sden_3200 cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Sden_3199 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Sden_1851 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Sden_1850 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Sden_1849 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D Sden_1848 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Sden_1274 cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Sden_1275 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Sden_1276 Cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D Sden_3225 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein D Sden_2671 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Sden_2307 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D Sden_1299 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Sden_3653 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:sdn04148] D Sden_3075 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D Sden_3201 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:sdn02024] D Sden_0981 LuxS protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Sden_3205 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Sden_2450 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Sden_0626 Anthranilate synthase component I and chorismate binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Sden_2451 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Sden_2622 staphylolysin. Metallo peptidase. MEROPS family M23A K08642 lasA; LasA protease [EC:3.4.24.-] D Sden_2901 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Sden_2750 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Sden_2011 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Sden_1074 spermidine/putrescine-binding periplasmic protein-like protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Sden_0072 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_1625 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_2934 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_3437 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_3736 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_3190 cyclic nucleotide-binding K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Sden_1447 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Sden_1144 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Sden_2916 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Sden_0761 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Sden_3775 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Sden_1016 secreted peptidase A. Serine peptidase. MEROPS family S08A K14645 K14645; serine protease [EC:3.4.21.-] D Sden_2868 secreted peptidase A. Serine peptidase. MEROPS family S08A K14645 K14645; serine protease [EC:3.4.21.-] D Sden_1409 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Sden_3289 Endonuclease I K14645 K14645; serine protease [EC:3.4.21.-] D Sden_0157 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Sden_1004 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Sden_0190 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Sden_1402 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Sden_0363 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Sden_3505 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Sden_3696 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Sden_2755 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:sdn02030] D Sden_1600 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_0712 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_0099 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_1601 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_1963 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_1091 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_2891 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_2955 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3066 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3100 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3293 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3297 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3296 CheW-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Sden_1346 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Sden_3298 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW D Sden_1351 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Sden_1350 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Sden_3294 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Sden_0659 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Sden_1344 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Sden_1345 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ D Sden_0523 CheC-like protein K03409 cheX; chemotaxis protein CheX D Sden_3301 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Sden_1347 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Sden_2527 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Sden_2144 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Sden_1301 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Sden_3300 chemotaxis protein, stimulates methylation of MCP protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Sden_3299 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Sden_1302 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Sden_3658 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Sden_1325 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Sden_1331 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Sden_1333 surface presentation of antigens (SPOA) protein K02416 fliM; flagellar motor switch protein FliM D Sden_3663 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN D Sden_1334 Flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN D Sden_0062 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN D Sden_2568 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Sden_3632 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Sden_2567 OmpA/MotB K02557 motB; chemotaxis protein MotB D Sden_3631 OmpA/MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:sdn02040] D Sden_0052 flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE D Sden_3660 flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE D Sden_1323 flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE D Sden_0053 secretory protein YscJ/FliF K02409 fliF; flagellar M-ring protein FliF D Sden_3659 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Sden_1324 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Sden_3658 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Sden_1325 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Sden_3657 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Sden_1326 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Sden_1327 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Sden_3656 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Sden_1328 Flagellar export FliJ K02413 fliJ; flagellar protein FliJ D Sden_3635 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Sden_1329 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Sden_0096 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Sden_3634 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Sden_1330 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Sden_1331 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Sden_1333 surface presentation of antigens (SPOA) protein K02416 fliM; flagellar motor switch protein FliM D Sden_3663 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN D Sden_1334 Flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN D Sden_0062 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN D Sden_1335 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ D Sden_0063 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Sden_3664 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Sden_1336 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Sden_0041 export protein FliQ, family 3 K02420 fliQ; flagellar biosynthesis protein FliQ D Sden_3665 export protein FliQ, family 3 K02420 fliQ; flagellar biosynthesis protein FliQ D Sden_1337 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Sden_3666 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Sden_1338 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Sden_0042 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR D Sden_0044 type III secretion FHIPEP K02400 flhA; flagellar biosynthesis protein FlhA D Sden_3668 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Sden_1340 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Sden_3667 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Sden_1339 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Sden_0043 type III secretion exporter K02401 flhB; flagellar biosynthesis protein FlhB D Sden_0047 Flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Sden_3652 Flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Sden_1300 Flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Sden_3651 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Sden_1303 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Sden_0051 putative flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Sden_3650 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Sden_1304 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Sden_0059 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Sden_3649 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Sden_1305 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Sden_0060 protein of unknown function DUF1078-like protein K02390 flgE; flagellar hook protein FlgE D Sden_3648 flagellar basal body FlaE K02390 flgE; flagellar hook protein FlgE D Sden_1306 protein of unknown function DUF1078-like protein K02390 flgE; flagellar hook protein FlgE D Sden_3647 Flagellar basal-body rod FlgF K02391 flgF; flagellar basal-body rod protein FlgF D Sden_1307 Flagellar basal-body rod FlgF K02391 flgF; flagellar basal-body rod protein FlgF D Sden_0045 Flagellar basal body rod protein-like protein K02391 flgF; flagellar basal-body rod protein FlgF D Sden_0046 protein of unknown function DUF1078-like protein K02392 flgG; flagellar basal-body rod protein FlgG D Sden_3646 Flagellar basal-body rod FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Sden_1308 Flagellar basal-body rod FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Sden_0048 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Sden_3645 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Sden_1309 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Sden_0049 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Sden_3644 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Sden_1310 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Sden_3643 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Sden_1311 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K02395 flgJ; peptidoglycan hydrolase FlgJ D Sden_3642 Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1 D Sden_1312 Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1 D Sden_3641 flagellin-like protein K02397 flgL; flagellar hook-associated protein 3 FlgL D Sden_1313 flagellin-like protein K02397 flgL; flagellar hook-associated protein 3 FlgL D Sden_1297 protein of unknown function DUF400 K09860 flgP; outer membrane protein FlgP D Sden_0510 Sel1 K21217 motX; sodium-type polar flagellar protein MotX D Sden_1398 OmpA/MotB K21218 motY; sodium-type flagellar protein MotY D Sden_3639 flagellin-like protein K02406 fliC; flagellin D Sden_1314 flagellin-like protein K02406 fliC; flagellin D Sden_1315 flagellin-like protein K02406 fliC; flagellin D Sden_3638 flagellar hook-associated 2-like protein K02407 fliD; flagellar hook-associated protein 2 D Sden_1317 flagellar hook-associated 2-like protein K02407 fliD; flagellar hook-associated protein 2 D Sden_3637 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Sden_1319 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Sden_2568 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Sden_3632 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Sden_2567 OmpA/MotB K02557 motB; chemotaxis protein MotB D Sden_3631 OmpA/MotB K02557 motB; chemotaxis protein MotB D Sden_1299 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Sden_3653 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D Sden_3654 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D Sden_1298 FlgN K02399 flgN; flagellar biosynthesis protein FlgN D Sden_2834 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Sden_1320 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Sden_0489 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Sden_1322 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC D Sden_3661 sigma-54 factor, interaction region K10943 flrC; two-component system, response regulator FlrC D Sden_3633 RNA polymerase sigma factor, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Sden_1343 RNA polymerase sigma factor, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Sden_1196 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D Sden_1115 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:sdn01501] D Sden_0771 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Sden_1945 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Sden_0675 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D Sden_0676 peptidase M23B K02172 blaR1; bla regulator protein blaR1 D Sden_0579 peptidase M56, BlaR1 K02172 blaR1; bla regulator protein blaR1 D Sden_0677 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Sden_0578 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Sden_0558 ATP-binding region, ATPase-like protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D Sden_3601 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_1737 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_1586 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_2192 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_3602 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump D Sden_1738 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Sden_1587 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Sden_3225 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein D Sden_0255 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Sden_0855 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Sden_0349 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Sden_0822 Beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6] D Sden_3154 Beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:sdn01502] D Sden_2354 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Sden_0522 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Sden_0351 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Sden_0352 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Sden_0355 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:sdn01503] D Sden_1263 ATP-binding region, ATPase-like protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Sden_1264 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Sden_0558 ATP-binding region, ATPase-like protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D Sden_0802 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Sden_2482 extracellular solute-binding protein, family 5 K19226 sapA; cationic peptide transport system substrate-binding protein D Sden_2483 binding-protein-dependent transport systems inner membrane component K19227 sapB; cationic peptide transport system permease protein D Sden_2484 binding-protein-dependent transport systems inner membrane component K19228 sapC; cationic peptide transport system permease protein D Sden_2485 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K19229 sapD; cationic peptide transport system ATP-binding protein D Sden_2486 ABC transporter related K19230 sapF; cationic peptide transport system ATP-binding protein D Sden_3462 ATP-binding region, ATPase-like protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Sden_3461 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Sden_1906 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Sden_3208 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Sden_0504 peptidase Do. Serine peptidase. MEROPS family S01B K04771 degP; serine protease Do [EC:3.4.21.107] D Sden_0285 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Sden_0773 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Sden_3601 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_1737 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_1586 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_2192 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_3602 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump D Sden_1738 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Sden_1587 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Sden_3225 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein D Sden_1566 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:sdn01000] C 01001 Protein kinases [BR:sdn01001] D Sden_1654 protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Sden_3725 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Sden_0307 HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Sden_2688 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Sden_1263 ATP-binding region, ATPase-like protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Sden_3539 ATP-binding region, ATPase-like protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Sden_3462 ATP-binding region, ATPase-like protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Sden_0235 ATP-binding region, ATPase-like protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D Sden_0558 ATP-binding region, ATPase-like protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D Sden_1191 Hpt sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Sden_2342 ATP-binding region, ATPase-like protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Sden_3474 histidine kinase, dimerisation and phosphoacceptor region K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D Sden_3054 histidine kinase, dimerisation and phosphoacceptor region K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D Sden_0848 histidine kinase internal region K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Sden_3457 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Sden_3296 CheW-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Sden_1346 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Sden_1321 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Sden_0601 ATP-binding region, ATPase-like protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Sden_0538 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:sdn01009] D Sden_1428 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Sden_1032 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:sdn01002] D Sden_2722 signal peptidase II. Aspartic peptidase. MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36] D Sden_3391 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Sden_1270 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Sden_3033 peptidase C26 K07010 K07010; putative glutamine amidotransferase D Sden_0474 colicin V processing peptidase. Cysteine peptidase. MEROPS family C39 K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Sden_3689 lipoprotein, NLP/P60 family K13695 nlpC; probable lipoprotein NlpC D Sden_1490 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Sden_2790 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Sden_2705 Glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Sden_3743 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Sden_3771 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Sden_3533 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Sden_2075 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Sden_0707 ErfK/YbiS/YcfS/YnhG K19235 ybiS; L,D-transpeptidase YbiS D Sden_1501 Peptidoglycan-binding domain 1 K21470 ycbB; L,D-transpeptidase YcbB D Sden_1909 Abortive infection protein K07052 K07052; CAAX protease family protein D Sden_0892 Abortive infection protein K07052 K07052; CAAX protease family protein D Sden_1723 Peptidase M1, alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Sden_2915 aminopeptidase N. Metallo peptidase. MEROPS family M01 K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Sden_2117 Peptidyl-dipeptidase A K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D Sden_3595 oligopeptidase A. Metallo peptidase. MEROPS family M03A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D Sden_3306 peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D Sden_1597 peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D Sden_3015 vibriolysin. Metallo peptidase. MEROPS family M04 K08604 hap; vibriolysin [EC:3.4.24.25] D Sden_0094 peptidase M6, immune inhibitor A K09607 ina; immune inhibitor A [EC:3.4.24.-] D Sden_1089 PgPepO oligopeptidase. Metallo peptidase. MEROPS family M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D Sden_1218 peptidase M16-like protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Sden_3485 peptidase M16-like protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Sden_3486 peptidase M16-like protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Sden_0871 PepA aminopeptidase. Metallo peptidase. MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Sden_3168 PepB aminopeptidase. Metallo peptidase. MEROPS family M17 K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D Sden_1814 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Sden_1011 Xaa-His dipeptidase. Metallo peptidase. MEROPS family M20C K01270 pepD; dipeptidase D [EC:3.4.13.-] D Sden_2622 staphylolysin. Metallo peptidase. MEROPS family M23A K08642 lasA; LasA protease [EC:3.4.24.-] D Sden_2504 peptidase M23B K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D Sden_1553 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Sden_0016 Xaa-Pro dipeptidase. Metallo peptidase. MEROPS family M24B K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Sden_0887 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Sden_0882 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D Sden_2616 extracellular peptidase. Metallo peptidase. MEROPS family M35 K08646 MEP; peptidyl-Lys metalloendopeptidase [EC:3.4.24.20] D Sden_1380 extracellular peptidase. Metallo peptidase. MEROPS family M35 K08646 MEP; peptidyl-Lys metalloendopeptidase [EC:3.4.24.20] D Sden_1000 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Sden_2130 HtpX peptidase. Metallo peptidase. MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Sden_1647 peptidase M48, Ste24p K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D Sden_1561 RseP peptidase. Metallo peptidase. MEROPS family M50B K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Sden_2265 hypothetical protein K16922 yydH; putative peptide zinc metalloprotease protein D Sden_0676 peptidase M23B K02172 blaR1; bla regulator protein blaR1 D Sden_0579 peptidase M56, BlaR1 K02172 blaR1; bla regulator protein blaR1 D Sden_1249 protein of unknown function DUF980 K09933 mtfA; MtfA peptidase D Sden_0504 peptidase Do. Serine peptidase. MEROPS family S01B K04771 degP; serine protease Do [EC:3.4.21.107] D Sden_0503 Peptidase S1C, DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-] D Sden_1016 secreted peptidase A. Serine peptidase. MEROPS family S08A K14645 K14645; serine protease [EC:3.4.21.-] D Sden_2868 secreted peptidase A. Serine peptidase. MEROPS family S08A K14645 K14645; serine protease [EC:3.4.21.-] D Sden_1409 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Sden_3289 Endonuclease I K14645 K14645; serine protease [EC:3.4.21.-] D Sden_0567 peptidase S8 and S53, subtilisin, kexin, sedolisin K13277 epr; minor extracellular protease Epr [EC:3.4.21.-] D Sden_2940 Prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D Sden_2985 dipeptidyl-peptidase IV. Serine peptidase. MEROPS family S09B K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D Sden_0851 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Sden_1095 murein-DD-endopeptidase. Serine peptidase. MEROPS family S11 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D Sden_1778 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Sden_2495 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Sden_2493 Lon-A peptidase. Serine peptidase. MEROPS family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Sden_2464 conserved hypothetical ATP-dependent protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D Sden_3515 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Sden_3236 peptidase S24, S26A and S26B K03503 umuD; DNA polymerase V [EC:3.4.21.-] D Sden_2462 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D Sden_2767 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D Sden_3700 C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Sden_1722 C-terminal processing peptidase-1. Serine peptidase. MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Sden_0954 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Sden_3735 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] D Sden_1901 signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-] D Sden_2471 sohB peptidase. Serine peptidase. MEROPS family S49 K04774 sohB; serine protease SohB [EC:3.4.21.-] D Sden_2131 alpha-aspartyl dipeptidase. Serine peptidase. MEROPS family S51 K05995 pepE; dipeptidase E [EC:3.4.13.21] D Sden_3618 Rhomboid-like protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D Sden_3361 HslV component of HslUV peptidase. Threonine peptidase. MEROPS family T01B K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Sden_1655 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Sden_1045 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Sden_0726 peptidase U32 K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D Sden_1038 peptidase U32 K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D Sden_1039 peptidase U32 K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D Sden_3067 microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 K03592 pmbA; PmbA protein D Sden_3327 microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 K03568 tldD; TldD protein D Sden_1880 hypothetical protein K08276 eco; ecotin D Sden_3202 HflC protein K04087 hflC; modulator of FtsH protease HflC D Sden_3203 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:sdn01003] D Sden_1156 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Sden_3164 Penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Sden_0255 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:sdn01005] D Sden_1566 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Sden_1567 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Sden_0360 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Sden_1564 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Sden_2500 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Sden_2198 lipid-A-disaccharide synthase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Sden_0708 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Sden_1605 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D Sden_3613 Three-deoxy-D-manno-octulosonic-acid transferase-like protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Sden_0802 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Sden_3612 lipopolysaccharide kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D Sden_2132 DegT/DnrJ/EryC1/StrS aminotransferase K19715 kdnA; 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:2.6.1.109] D Sden_2133 iron-containing alcohol dehydrogenase K19714 kdnB; 3-deoxy-alpha-D-manno-octulosonate 8-oxidase [EC:1.1.3.48] D Sden_0925 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Sden_2666 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Sden_2134 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Sden_0493 Phosphatase kdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Sden_0494 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Sden_3611 glycosyl transferase, family 9 K12982 opsX; heptosyltransferase I [EC:2.4.-.-] D Sden_1383 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Sden_0709 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sdn01011] D Sden_0502 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Sden_0153 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Sden_0356 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Sden_0353 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Sden_0350 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Sden_2354 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Sden_0522 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Sden_0232 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Sden_0352 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Sden_0355 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Sden_2826 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Sden_0465 phosphoesterase, PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Sden_2725 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Sden_0255 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Sden_3164 Penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Sden_0855 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Sden_0349 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Sden_0851 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Sden_1778 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Sden_1095 murein-DD-endopeptidase. Serine peptidase. MEROPS family S11 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D Sden_1156 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Sden_0707 ErfK/YbiS/YcfS/YnhG K19235 ybiS; L,D-transpeptidase YbiS D Sden_1501 Peptidoglycan-binding domain 1 K21470 ycbB; L,D-transpeptidase YcbB D Sden_2504 peptidase M23B K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D Sden_2347 Lytic transglycosylase, catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Sden_0853 Lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Sden_2141 Lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Sden_1631 membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Sden_2022 Lytic transglycosylase, catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D Sden_1857 Lytic transglycosylase, catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D Sden_1272 Lytic transglycosylase, catalytic K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D Sden_2052 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Sden_0852 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Sden_3208 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Sden_3386 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] D Sden_2824 major outer membrane lipoprotein, putative K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:sdn01004] D Sden_2294 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Sden_2295 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Sden_1381 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Sden_3119 3-oxoacyl-(acyl-carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Sden_3120 3-oxoacyl-(acyl-carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Sden_1482 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Sden_2291 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Sden_1937 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Sden_2293 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Sden_3106 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Sden_2465 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D Sden_1565 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Sden_2487 short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Sden_2368 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Sden_1670 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D Sden_0229 Delta-9 acyl-phospholipid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D Sden_2044 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Sden_0072 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_1625 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_2934 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_3437 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_3736 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_3514 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Sden_2296 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Sden_2829 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Sden_0530 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:sdn01008] D Sden_2195 beta-lactamase-like protein K05555 actIV; cyclase [EC:4.-.-.-] D Sden_0634 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D Sden_1468 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:sdn01006] D Sden_2570 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Sden_2928 Trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Sden_1558 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Sden_3206 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Sden_1669 1,4-Dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Sden_0483 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Sden_3524 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:sdn01007] D Sden_2533 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Sden_2413 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Sden_3171 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Sden_2810 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Sden_0269 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Sden_2498 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Sden_3357 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Sden_2056 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Sden_2723 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Sden_2867 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Sden_0797 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Sden_3127 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Sden_1887 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Sden_1958 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Sden_1257 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Sden_0009 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Sden_0008 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Sden_1747 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Sden_2544 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Sden_1705 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Sden_1213 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Sden_1602 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Sden_1603 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Sden_1750 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Sden_1993 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Sden_1668 aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Sden_1616 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Sden_3615 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Sden_1659 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Sden_3193 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Sden_1054 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Sden_0910 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Sden_1657 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Sden_2819 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Sden_0289 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Sden_1165 aminotransferase, class V K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D Sden_0404 alanine-glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Sden_0552 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Sden_1947 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:sdn00194] D Sden_3751 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Sden_3752 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Sden_3753 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Sden_3754 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Sden_3755 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Sden_3756 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Sden_3757 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Sden_3758 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Sden_3759 ATP synthase I chain K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:sdn03000] D Sden_2489 transcription activator, effector binding K13652 K13652; AraC family transcriptional regulator D Sden_3013 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator D Sden_1440 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator D Sden_1493 Transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D Sden_2531 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Sden_2565 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Sden_3416 transcriptional regulator, LysR family K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D Sden_0731 transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D Sden_2776 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D Sden_2788 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Sden_2096 transcriptional regulator, LysR family K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D Sden_2309 transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D Sden_2609 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Sden_2709 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Sden_0082 transcriptional regulator, histidine utilization repressor, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D Sden_1635 transcriptional regulator, GntR family K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D Sden_3384 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Sden_0713 transcriptional regulator, TetR family K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D Sden_0323 cell division inhibitor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D Sden_1388 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Sden_1279 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D Sden_0230 transcriptional regulator, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D Sden_2397 transcriptional regulator, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D Sden_3049 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D Sden_1742 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Sden_2327 transcriptional regulator, LuxR family K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation D Sden_3096 transcriptional regulator, LuxR family K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation D Sden_3161 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Sden_3690 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Sden_1798 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Sden_3408 transcriptional regulator, MerR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D Sden_2125 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D Sden_1593 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Sden_3190 cyclic nucleotide-binding K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Sden_1843 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Sden_3444 cyclic nucleotide-binding K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Sden_1457 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Sden_3702 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D Sden_3552 low molecular weight phosphotyrosine protein phosphatase K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D Sden_2727 transcriptional regulator, ArsR family K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D Sden_0020 transcriptional regulator, ArsR family K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D Sden_1064 transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D Sden_0473 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator D Sden_0894 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator D Sden_2080 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D Sden_0677 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Sden_0578 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Sden_0154 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Sden_0444 helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Sden_2743 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D Sden_0306 transciptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Sden_1320 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Sden_2338 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Sden_1970 sigma-54 factor, interaction region K12266 norR; anaerobic nitric oxide reductase transcription regulator D Sden_1687 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Sden_3598 Helix-turn-helix type 3 K07727 K07727; putative transcriptional regulator D Sden_1425 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Sden_0614 methionine repressor, MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D Sden_0689 delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Sden_2220 FMN-binding K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Sden_0980 transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D Sden_3760 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Sden_2672 transcription antitermination protein nusG K05785 rfaH; transcriptional antiterminator RfaH D Sden_0825 transcriptional regulator, ArgR family K03402 argR; transcriptional regulator of arginine metabolism D Sden_2593 transcriptional regulator, TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D Sden_3304 transcriptional regulatory protein-like protein K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1 D Sden_1734 glycine cleavage system transcriptional repressor, putative K03567 gcvR; glycine cleavage system transcriptional repressor D Sden_2481 sigma-54 factor, interaction region K03974 pspF; psp operon transcriptional activator D Sden_2478 phage shock protein C, PspC K03973 pspC; phage shock protein C D Sden_0315 Prophage CP4-57 regulatory K07733 alpA; prophage regulatory protein D Sden_3742 negative transcriptional regulator K07734 paiB; transcriptional regulator D Sden_2674 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator D Sden_3170 RNA polymerase-binding, DksA K06204 dksA; RNA polymerase-binding transcription factor D Sden_1143 Protein of unknown function DUF193 K07738 nrdR; transcriptional repressor NrdR D Sden_3267 conserved hypothetical protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D Sden_0346 protein of unknown function UPF0040 K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:sdn03021] D Sden_0195 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Sden_0163 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Sden_0164 DNA-directed RNA polymerase, subunit beta-prime K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Sden_3434 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Sden_2834 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Sden_1204 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D Sden_2772 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Sden_1522 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Sden_3502 RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D Sden_0489 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Sden_3633 RNA polymerase sigma factor, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Sden_1343 RNA polymerase sigma factor, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Sden_0536 SNF2-related K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D Sden_1006 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Sden_1148 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Sden_0158 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Sden_3198 glutathione S-transferase-like protein K03599 sspA; stringent starvation protein A D Sden_3197 Stringent starvation protein B K03600 sspB; stringent starvation protein B D Sden_2771 anti sigma-E protein, RseA K03597 rseA; sigma-E factor negative regulatory protein RseA D Sden_2770 sigma E regulatory protein, MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB D Sden_2769 positive regulator of sigma(E), RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC D Sden_3170 RNA polymerase-binding, DksA K06204 dksA; RNA polymerase-binding transcription factor D Sden_0997 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Sden_0240 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D Sden_0447 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Sden_2106 transcriptional antiterminator, Rof K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:sdn03019] D Sden_2302 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Sden_3330 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D Sden_2766 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Sden_0511 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Sden_3212 Exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Sden_0449 DEAD/DEAH box helicase-like protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Sden_3026 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_0891 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_0886 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_1184 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_2529 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_2576 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_2952 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Sden_3317 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Sden_1782 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Sden_0332 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Sden_1196 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Sden_1019 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Sden_0447 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Sden_1182 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Sden_0422 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Sden_3205 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Sden_3172 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Sden_2782 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Sden_1214 carbon storage regulator, CsrA / carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Sden_3352 diguanylate cyclase/phosphodiesterase K18765 csrD; RNase E specificity factor CsrD D Sden_1862 diguanylate cyclase/phosphodiesterase K18765 csrD; RNase E specificity factor CsrD D Sden_0463 Protein of unknown function 1935 K02553 rraA; regulator of ribonuclease activity A D Sden_2025 Protein of unknown function 1935 K02553 rraA; regulator of ribonuclease activity A D Sden_0531 protein of unknown function DUF1260 K09893 rraB; regulator of ribonuclease activity B D Sden_0486 Uncharacterised P-loop ATPase protein UPF0042 K06958 rapZ; RNase adapter protein RapZ D Sden_1507 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D Sden_3165 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:sdn03011] D Sden_1753 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Sden_1554 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Sden_0176 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Sden_0194 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Sden_0187 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Sden_0515 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D Sden_0166 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Sden_0184 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Sden_0507 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Sden_0169 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Sden_0193 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Sden_0165 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Sden_0192 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Sden_0183 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Sden_1010 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Sden_2754 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Sden_0179 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Sden_0517 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Sden_0174 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Sden_2726 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Sden_2831 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Sden_0160 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Sden_0173 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Sden_0170 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Sden_0171 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Sden_0182 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Sden_0185 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Sden_0518 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Sden_0161 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Sden_0159 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Sden_0162 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Sden_0506 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Sden_0180 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Sden_0189 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Sden_0177 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Sden_0196 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Sden_0186 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Sden_2751 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Sden_1708 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Sden_2927 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Sden_0175 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Sden_0172 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Sden_0181 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Sden_2926 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Sden_0327 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Sden_0178 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Sden_0188 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Sden_3354 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Sden_2297 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D Sden_0328 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Sden_3778 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D Sden_1707 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Sden_0191 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Sden_1503 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Sden_R0115 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0125 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0105 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0011 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0120 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0017 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0048 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0044 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0119 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0127 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0107 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0122 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0126 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0116 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0016 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0106 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0047 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0121 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:sdn03009] D Sden_2766 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Sden_1654 protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Sden_3212 Exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Sden_2765 GTP-binding protein Era K03595 era; GTPase D Sden_2925 GTP1/OBG subdomain K03979 obgE; GTPase [EC:3.6.5.-] D Sden_3170 RNA polymerase-binding, DksA K06204 dksA; RNA polymerase-binding transcription factor D Sden_1006 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Sden_1148 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Sden_0158 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Sden_1090 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Sden_0793 Pseudouridine synthase, Rsu K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Sden_2876 Pseudouridine synthase, Rsu K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Sden_0685 Pseudouridine synthase, Rsu K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Sden_2888 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Sden_0022 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Sden_2643 Fmu (Sun) K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Sden_1739 Fmu (Sun) K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Sden_2977 16S rRNA m(2)G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Sden_3506 conserved hypothetical protein 95 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Sden_2974 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Sden_2046 NOL1/NOP2/sun family putative RNA methylase K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] D Sden_3762 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Sden_0347 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Sden_0274 Protein of unknown function UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Sden_3610 protein of unknown function DUF548 K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D Sden_2825 Methyltransferase type 11 K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Sden_2286 rRNA (guanine-N(1)-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Sden_0512 RNA methyltransferase TrmH, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Sden_0999 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Sden_0097 protein of unknown function DUF890 K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D Sden_2937 rRNA (guanine-N(2)-)-methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D Sden_0856 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Sden_3286 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Sden_2359 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Sden_3155 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Sden_3609 protein of unknown function DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D Sden_2470 putative RNA methylase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D Sden_2562 conserved hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D Sden_1253 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Sden_1192 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Sden_0688 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Sden_3048 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Sden_1014 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Sden_2524 Pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Sden_0111 Pseudouridine synthase RluA-like protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Sden_0482 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Sden_2436 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Sden_2301 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Sden_2863 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Sden_1830 ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D Sden_1748 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D Sden_2855 SSU ribosomal protein S18P alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Sden_2398 SSU ribosomal protein S6P modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D Sden_2640 SSU ribosomal protein S6P modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D Sden_2753 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Sden_0824 protein of unknown function DUF181 K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D Sden_0446 LSU ribosomal protein L11P methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Sden_1536 modification methylase, HemK family K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D Sden_1825 Cupin 4 K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D Sden_2302 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Sden_3330 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D Sden_2673 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Sden_2949 DEAD/DEAH box helicase-like protein K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D Sden_3317 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Sden_0744 DEAD/DEAH box helicase-like protein K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D Sden_3213 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Sden_1260 Small GTP-binding protein domain K03977 engA; GTPase D Sden_2306 GTP-binding K14540 rbgA; ribosome biogenesis GTPase A D Sden_3204 GTP-binding protein, HSR1-related K03665 hflX; GTPase D Sden_0029 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Sden_3435 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Sden_1008 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Sden_1005 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Sden_2510 RNA-binding S4 K14761 rlbA; ribosome-associated protein D Sden_0857 Iojap-related protein K09710 ybeB; ribosome-associated protein D Sden_0813 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Sden_0998 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Sden_1446 conserved hypothetical protein K14762 yibL; ribosome-associated protein D Sden_3068 protein of unknown function DUF615 K09889 yjgA; ribosome-associated protein D Sden_2466 ribosome modulation factor K03812 rmf; ribosome modulation factor D Sden_0488 sigma 54 modulation protein / SSU ribosomal protein S30P K05808 hpf; ribosome hibernation promoting factor D Sden_2746 SSU ribosomal protein S30P / sigma 54 modulation protein K05809 raiA; ribosome-associated inhibitor A D Sden_1226 SSU ribosomal protein S30P / sigma 54 modulation protein K05809 raiA; ribosome-associated inhibitor A D Sden_0819 conserved hypothetical protein K06942 ychF; ribosome-binding ATPase D Sden_2298 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:sdn03016] D Sden_2823 metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Sden_2533 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Sden_2544 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Sden_2723 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Sden_0797 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Sden_2056 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Sden_2413 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Sden_3357 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Sden_3127 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Sden_1887 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Sden_1213 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Sden_1958 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Sden_1705 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Sden_1747 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Sden_2498 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Sden_2867 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Sden_1257 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Sden_1602 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Sden_1603 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Sden_2810 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Sden_0269 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Sden_3447 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Sden_3180 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Sden_2325 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Sden_1065 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Sden_2697 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Sden_2542 protein of unknown function UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Sden_1486 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Sden_1009 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Sden_1200 Pseudouridylate synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Sden_1458 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Sden_0029 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Sden_3206 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Sden_3774 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Sden_3763 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Sden_0228 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Sden_2611 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Sden_0225 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Sden_3777 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Sden_R0014 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Sden_1397 RNAse T K03683 rnt; ribonuclease T [EC:3.1.13.-] D Sden_0319 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Sden_1626 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D Sden_3167 2',5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Sden_1141 ABC transporter related K06020 ettA; energy-dependent translational throttle protein EttA D Sden_0009 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Sden_0008 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Sden_3171 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Sden_1271 CMP/dCMP deaminase, zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Sden_3232 TIM-barrel protein, yjbN family K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D Sden_0445 Dihydrouridine synthase TIM-barrel protein nifR3 K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Sden_2388 dihydrouridine synthase, DuS K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D Sden_0815 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Sden_1889 methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Sden_1890 methyltransferase, putative K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D Sden_0231 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D Sden_2752 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Sden_2942 tRNA (guanosine-2'-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D Sden_1455 RNA methyltransferase TrmH, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D Sden_2403 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D Sden_3484 RNA methyltransferase TrmH, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Sden_0745 conserved hypothetical O-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D Sden_1546 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D Sden_0688 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Sden_3048 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Sden_1014 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Sden_2524 Pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Sden_0111 Pseudouridine synthase RluA-like protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Sden_0482 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Sden_1828 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Sden_1841 PP-loop K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Sden_0013 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Sden_1648 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Sden_1806 DsrH like protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B D Sden_1807 DsrE-like protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C D Sden_1808 DsrE-like protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Sden_1805 DsrC-like protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Sden_1460 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D Sden_2956 glycine cleavage T protein (aminomethyl transferase) K06980 ygfZ; tRNA-modifying protein YgfZ D Sden_2203 tRNA--hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D Sden_1481 FAD dependent oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D Sden_1400 S-adenosylmethionine K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Sden_2015 ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Sden_2014 radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Sden_1513 GTP cyclohydrolase I K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Sden_0733 4Fe-4S cluster binding K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Sden_0227 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D Sden_1401 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Sden_2566 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Sden_1570 tRNA(Ile)-lysidine synthetase-like protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Sden_1620 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Sden_2830 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Sden_3209 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Sden_0542 UBA/THIF-type NAD/FAD binding fold K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Sden_0511 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Sden_1019 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:sdn03012] D Sden_2675 translation initiation factor 1 (eIF-1/SUI1) K03113 EIF1; translation initiation factor 1 D Sden_1007 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D Sden_1706 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D Sden_3178 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Sden_1555 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Sden_0168 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Sden_2958 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Sden_0167 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Sden_0920 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1 D Sden_1557 ribosome recycling factor K02838 frr; ribosome recycling factor D Sden_0921 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Sden_0818 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Sden_1835 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D Sden_1992 translation elongation factor P (EF-P) K02356 efp; elongation factor P D Sden_3128 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2 D Sden_1021 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3 D Sden_3284 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:sdn03110] D Sden_1834 ATPase AAA-2 K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D Sden_2861 ATPase AAA-2 K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Sden_2494 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Sden_3362 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Sden_1428 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Sden_1182 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Sden_1462 Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D Sden_2099 conserved hypothetical protein K04046 yegD; hypothetical chaperone protein D Sden_0422 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Sden_1183 Chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Sden_2882 heat shock protein DnaJ-like protein K05801 djlA; DnaJ like chaperone protein D Sden_1461 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB D Sden_0118 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Sden_2572 GrpE protein K03687 GRPE; molecular chaperone GrpE D Sden_2126 heat shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA D Sden_0119 RNA-binding S4 K04762 hslR; ribosome-associated heat shock protein Hsp15 D Sden_0421 chaperonin Cpn10 K04078 groES; chaperonin GroES D Sden_0504 peptidase Do. Serine peptidase. MEROPS family S01B K04771 degP; serine protease Do [EC:3.4.21.107] D Sden_1000 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Sden_3758 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Sden_3696 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Sden_3460 spheroplast protein y precursor, putative K06006 cpxP; periplasmic protein CpxP/Spy D Sden_3228 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A D Sden_3479 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A D Sden_1016 secreted peptidase A. Serine peptidase. MEROPS family S08A K14645 K14645; serine protease [EC:3.4.21.-] D Sden_2868 secreted peptidase A. Serine peptidase. MEROPS family S08A K14645 K14645; serine protease [EC:3.4.21.-] D Sden_1409 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Sden_3289 Endonuclease I K14645 K14645; serine protease [EC:3.4.21.-] D Sden_0567 peptidase S8 and S53, subtilisin, kexin, sedolisin K13277 epr; minor extracellular protease Epr [EC:3.4.21.-] D Sden_0553 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Sden_0773 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Sden_3302 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Sden_2499 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Sden_2491 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D Sden_2909 peptidylprolyl isomerase, FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D Sden_0993 peptidylprolyl isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D Sden_2721 peptidylprolyl isomerase, FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D Sden_2741 peptidylprolyl isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Sden_2140 peptidylprolyl isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Sden_2417 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Sden_3308 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Sden_2886 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D Sden_0448 thioredoxin K03671 TXN; thioredoxin D Sden_1429 thioredoxin-related K05838 ybbN; putative thioredoxin D Sden_2090 Glutaredoxin, GrxA K03674 grxA; glutaredoxin 1 D Sden_1640 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin D Sden_0285 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Sden_1633 Disulphide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D Sden_0748 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Sden_0416 Protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D Sden_3565 periplasmic protein thiol K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:sdn04131] D Sden_2390 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Sden_0682 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Sden_1791 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Sden_1793 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Sden_2081 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Sden_1428 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:sdn04121] C 03051 Proteasome [BR:sdn03051] D Sden_1428 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:sdn03032] D Sden_2019 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Sden_0758 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Sden_0291 ERCC4 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D Sden_1500 histone-like DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D Sden_2492 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Sden_0658 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Sden_1604 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Sden_1754 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Sden_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Sden_0521 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Sden_2833 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Sden_3313 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Sden_1569 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Sden_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Sden_2866 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Sden_0795 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Sden_2050 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Sden_3773 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Sden_2018 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Sden_2381 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Sden_1568 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Sden_3620 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Sden_2514 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Sden_0264 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Sden_1986 seqA protein K03645 seqA; negative modulator of initiation of replication D Sden_1643 regulatory inactivation of DnaA Hda protein K10763 hda; DnaA-homolog protein D Sden_1948 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Sden_0004 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Sden_3218 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Sden_3220 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Sden_2328 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Sden_2400 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:sdn03036] D Sden_2766 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Sden_2540 histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS D Sden_1500 histone-like DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D Sden_2492 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Sden_0658 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Sden_1604 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Sden_1754 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Sden_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Sden_0271 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein D Sden_0444 helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Sden_3205 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Sden_1742 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Sden_2335 37kDa nucleoid-associated protein K06899 ndpA; nucleoid-associated protein D Sden_0836 Nucleoid-associated protein-like protein K06899 ndpA; nucleoid-associated protein D Sden_2516 Chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Sden_2447 condensin subunit ScpA K05896 scpA; segregation and condensation protein A D Sden_2446 condensin subunit ScpB K06024 scpB; segregation and condensation protein B D Sden_0358 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Sden_1197 cell division protein FtsB K05589 ftsB; cell division protein FtsB D Sden_3504 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Sden_0349 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Sden_1743 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Sden_0348 Cell division protein, FtsL -like protein K03586 ftsL; cell division protein FtsL D Sden_3358 Sporulation related K03591 ftsN; cell division protein FtsN D Sden_0357 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D Sden_0354 Phosphopantetheine attachment site K03588 ftsW; cell division protein FtsW D Sden_3503 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Sden_0359 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Sden_1698 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Sden_2515 cell division protein ZipA K03528 zipA; cell division protein ZipA D Sden_0829 cell division protein ZapA K09888 zapA; cell division protein ZapA D Sden_0287 protein of unknown function DUF904 K09892 zapB; cell division protein ZapB D Sden_1731 protein of unknown function DUF1379 K18657 zapC; cell division protein ZapC D Sden_3393 protein of unknown function DUF1342 K18778 zapD; cell division protein ZapD D Sden_2522 AFG1-like ATPase K06916 zapE; cell division protein ZapE D Sden_0505 AFG1-like ATPase K06916 zapE; cell division protein ZapE D Sden_3208 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Sden_3601 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_1737 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_1586 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_2192 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_1629 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Sden_1628 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Sden_1627 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Sden_3516 conserved hypothetical protein K13053 sulA; cell division inhibitor SulA D Sden_0323 cell division inhibitor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D Sden_1986 seqA protein K03645 seqA; negative modulator of initiation of replication D Sden_3334 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Sden_2946 rod shape-determining-related protein K03569 mreB; rod shape-determining protein MreB and related proteins D Sden_3333 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Sden_3332 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Sden_0854 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Sden_3761 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Sden_1451 conserved hypothetical protein K03496 parA; chromosome partitioning protein D Sden_1349 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Sden_3760 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Sden_3218 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Sden_3220 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Sden_3763 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Sden_3762 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Sden_0393 Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D Sden_0747 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Sden_1137 phage integrase K04763 xerD; integrase/recombinase XerD D Sden_2055 ATP-binding protein, Mrp/Nbp35 family K03593 mrp; ATP-binding protein involved in chromosome partitioning D Sden_0294 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Sden_0297 conserved hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Sden_3621 cell division checkpoint GTPase YihA K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:sdn03400] D Sden_2530 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Sden_2838 Deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Sden_2929 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Sden_2698 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Sden_1869 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Sden_0291 ERCC4 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D Sden_3395 mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Sden_0324 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Sden_1493 Transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D Sden_2531 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Sden_0010 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Sden_0210 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Sden_1465 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Sden_0749 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Sden_2514 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Sden_3620 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Sden_3315 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Sden_1797 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Sden_1437 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Sden_0484 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Sden_0163 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Sden_0164 DNA-directed RNA polymerase, subunit beta-prime K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Sden_0195 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Sden_3434 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Sden_1674 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Sden_1207 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Sden_3207 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Sden_2783 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D Sden_2287 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Sden_1268 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Sden_2569 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Sden_1569 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Sden_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Sden_2866 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Sden_0795 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Sden_2050 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Sden_3773 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Sden_2018 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Sden_2381 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Sden_3313 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Sden_0264 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Sden_2352 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Sden_2351 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Sden_2353 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Sden_1208 recA protein K03553 recA; recombination protein RecA D Sden_1884 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Sden_1883 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Sden_1885 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Sden_3356 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Sden_0516 restart primosome assembly protein PriB K02686 priB; primosomal replication protein N D Sden_2431 primosomal replication protein N'', putative K04067 priC; primosomal replication protein N'' D Sden_2505 SMC protein-like protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Sden_2506 Exodeoxyribonuclease I subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D Sden_1035 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Sden_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Sden_3476 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Sden_2764 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Sden_1427 recombination protein RecR K06187 recR; recombination protein RecR D Sden_1151 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Sden_2691 putative exonuclease, RdgC K03554 rdgC; recombination associated protein RdgC D Sden_2089 type III restriction enzyme, res subunit K19789 radD; DNA repair protein RadD D Sden_1948 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Sden_0004 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Sden_2328 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Sden_1500 histone-like DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D Sden_2492 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Sden_0658 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Sden_0444 helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Sden_1604 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Sden_1754 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Sden_1782 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Sden_0332 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Sden_2540 histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS D Sden_1185 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Sden_3235 DNA-directed DNA polymerase K03502 umuC; DNA polymerase V D Sden_3236 peptidase S24, S26A and S26B K03503 umuD; DNA polymerase V [EC:3.4.21.-] D Sden_3515 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Sden_2428 DNA damage-inducible DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D Sden_0902 regulatory protein RecX K03565 recX; regulatory protein D Sden_0406 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D Sden_2429 Helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Sden_1619 Helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Sden_1952 ribonucleoside-diphosphate reductase class Ia alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Sden_1953 ribonucleoside-diphosphate reductase class Ia beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:sdn03029] D Sden_3200 cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Sden_1007 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D Sden_1706 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D Sden_1555 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Sden_0168 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Sden_2958 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Sden_0167 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Sden_2765 GTP-binding protein Era K03595 era; GTPase D Sden_2810 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Sden_0797 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Sden_1887 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Sden_3357 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Sden_3313 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Sden_1562 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family D Sden_1182 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Sden_2572 GrpE protein K03687 GRPE; molecular chaperone GrpE D Sden_0422 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Sden_0421 chaperonin Cpn10 K04078 groES; chaperonin GroES D Sden_1183 Chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Sden_1458 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Sden_1461 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB D Sden_1640 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin D Sden_2055 ATP-binding protein, Mrp/Nbp35 family K03593 mrp; ATP-binding protein involved in chromosome partitioning D Sden_3524 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Sden_3519 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D Sden_3523 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Sden_3775 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Sden_3521 conserved hypothetical protein K14998 SURF1; surfeit locus 1 family protein D Sden_3480 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 D Sden_3525 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 D Sden_1428 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:sdn02000] D Sden_2199 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Sden_0474 colicin V processing peptidase. Cysteine peptidase. MEROPS family C39 K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Sden_2899 ABC transporter related K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D Sden_2532 ABC transporter related K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D Sden_2936 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Sden_0383 ABC transporter related K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Sden_0859 ABC transporter related K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Sden_0860 ABC transporter related K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Sden_2468 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein D Sden_0105 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Sden_0106 Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D Sden_0107 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Sden_3031 extracellular solute-binding protein, family 1 K11073 potF; putrescine transport system substrate-binding protein D Sden_3028 binding-protein-dependent transport systems inner membrane component K11074 potI; putrescine transport system permease protein D Sden_3029 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein D Sden_3030 spermidine/putrescine ABC transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D Sden_1074 spermidine/putrescine-binding periplasmic protein-like protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Sden_0498 Mammalian cell entry related K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Sden_0668 Mammalian cell entry related K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Sden_0670 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Sden_0497 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Sden_0669 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Sden_0496 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Sden_0499 toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein D Sden_0500 SpoIIAA family protein K07122 mlaB; phospholipid transport system transporter-binding protein D Sden_2553 Phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Sden_2584 binding-protein-dependent transport systems inner membrane component K02037 pstC; phosphate transport system permease protein D Sden_2583 Phosphate transport system permease protein 2 K02038 pstA; phosphate transport system permease protein D Sden_2582 Phosphate transport system permease protein 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Sden_1899 Phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein D Sden_1897 binding-protein-dependent transport systems inner membrane component K02042 phnE; phosphonate transport system permease protein D Sden_1898 ABC transporter related K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Sden_2148 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Sden_1071 extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Sden_2202 ABC-type amino acid transport/signal transduction systems periplasmic component/domain-like protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Sden_1052 conserved hypothetical amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Sden_1583 ABC transporter, periplasmic domain K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Sden_3307 extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Sden_0883 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Sden_0704 putative amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Sden_0410 putative cation efflux protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Sden_2234 conserved hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Sden_2954 conserved hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Sden_2482 extracellular solute-binding protein, family 5 K19226 sapA; cationic peptide transport system substrate-binding protein D Sden_2483 binding-protein-dependent transport systems inner membrane component K19227 sapB; cationic peptide transport system permease protein D Sden_2484 binding-protein-dependent transport systems inner membrane component K19228 sapC; cationic peptide transport system permease protein D Sden_2485 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K19229 sapD; cationic peptide transport system ATP-binding protein D Sden_2486 ABC transporter related K19230 sapF; cationic peptide transport system ATP-binding protein D Sden_0786 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein D Sden_0785 transport system permease protein K25133 hmuU; heme transport system permease protein D Sden_0784 ABC transporter related K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D Sden_1117 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Sden_1116 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Sden_2853 periplasmic binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D Sden_0528 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D Sden_0529 ABC-3 K02075 ABC.ZM.P; zinc/manganese transport system permease protein D Sden_0872 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein D Sden_0873 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein D Sden_0490 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Sden_0066 transport protein, putative K09696 natB; sodium transport system permease protein D Sden_0067 ABC transporter related K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Sden_2216 conserved hypothetical nitrous oxide metabolic protein K19341 nosY; Cu-processing system permease protein D Sden_2217 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein D Sden_1676 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Sden_1678 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Sden_1677 Lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Sden_3572 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D D Sden_3571 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D Sden_3570 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D Sden_3569 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Sden_3503 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Sden_3504 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Sden_0652 ABC-2 K01992 ABC-2.P; ABC-2 type transport system permease protein D Sden_2283 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Sden_0070 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Sden_1076 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Sden_0653 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Sden_2284 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Sden_2848 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Sden_2849 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Sden_2366 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Sden_2850 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Sden_2367 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Sden_2459 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Sden_1702 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Sden_3527 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Sden_0420 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Sden_2374 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Sden_2027 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D Sden_2606 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D Sden_2702 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D Sden_1538 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D Sden_3550 major facilitator superfamily MFS_1 K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D Sden_3714 Nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Sden_0771 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Sden_3494 Drug resistance transporter Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Sden_2043 Drug resistance transporter Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Sden_0587 major facilitator superfamily MFS_1 K23361 sbnD; MFS transporter, DHA1 family, staphyloferrin B biosynthesis exporter D Sden_1672 major facilitator superfamily MFS_1 K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D Sden_1817 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Sden_2781 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D Sden_1818 Phosphotransferase system, HPr K02784 ptsH; phosphocarrier protein HPr D Sden_0485 Phosphotransferase system, HPr K08485 ptsO; phosphocarrier protein NPr D Sden_1816 PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Sden_1548 PTS system, glucose-like IIB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D Sden_0487 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Sden_2375 Ion transport protein K10716 kch; voltage-gated potassium channel D Sden_0694 Ion transport 2 K10716 kch; voltage-gated potassium channel D Sden_2904 Rh-like protein/ammonium transporter K03320 amt; ammonium transporter, Amt family D Sden_0766 ammonium transporter K03320 amt; ammonium transporter, Amt family D Sden_0739 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Sden_0764 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Sden_3511 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Sden_1385 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Sden_2101 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Sden_3198 glutathione S-transferase-like protein K03599 sspA; stringent starvation protein A D Sden_1524 TPR repeat K07114 yfbK; Ca-activated chloride channel homolog D Sden_1525 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog D Sden_1809 protein of unknown function UPF0005 K19416 yccA; modulator of FtsH protease D Sden_1359 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Sden_0086 MscS Mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel D Sden_2551 magnesium transporter K06213 mgtE; magnesium transporter D Sden_2568 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Sden_3632 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Sden_2567 OmpA/MotB K02557 motB; chemotaxis protein MotB D Sden_3631 OmpA/MotB K02557 motB; chemotaxis protein MotB D Sden_0510 Sel1 K21217 motX; sodium-type polar flagellar protein MotX D Sden_1398 OmpA/MotB K21218 motY; sodium-type flagellar protein MotY D Sden_2423 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Sden_2424 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Sden_0788 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Sden_2157 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Sden_2156 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Sden_2155 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Sden_2422 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Sden_1391 MotA/TolQ/ExbB proton channel K03562 tolQ; biopolymer transport protein TolQ D Sden_1392 Biopolymer transport protein ExbD/TolR K03560 tolR; biopolymer transport protein TolR D Sden_2334 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D Sden_2908 Mg2+ transporter protein, CorA-like protein K16074 zntB; zinc transporter D Sden_1746 camphor resistance protein CrcB K06199 crcB; fluoride exporter D Sden_2757 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Sden_3417 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Sden_2229 porin, Gram-negative type K16076 nmpC; outer membrane porin protein LC D Sden_2732 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Sden_2733 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Sden_0380 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Sden_1358 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Sden_0340 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Sden_1414 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Sden_1024 nucleoside-specific channel-forming protein, Tsx K05517 tsx; nucleoside-specific channel-forming protein D Sden_3728 Cadherin K19231 bmaC; fibronectin-binding autotransporter adhesin D Sden_0609 TonB-dependent siderophore receptor K16091 fecA; Fe(3+) dicitrate transport protein D Sden_3064 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D Sden_2172 TonB-dependent receptor, plug K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D Sden_2159 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D Sden_0790 TonB-dependent haem/haemoglobin receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D Sden_2503 TonB-dependent haem/haemoglobin receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D Sden_3124 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D Sden_0582 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Sden_0666 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Sden_0729 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Sden_0470 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Sden_2404 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Sden_2931 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Sden_2029 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Sden_2708 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Sden_0901 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Sden_0621 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Sden_0738 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Sden_2321 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Sden_2427 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Sden_3225 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein D Sden_0381 Type I secretion outer membrane protein, TolC K12543 lapE; outer membrane protein, adhesin transport system D Sden_3081 RND efflux system, outer membrane lipoprotein, NodT K18300 oprN; outer membrane protein, multidrug efflux system D Sden_2671 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Sden_1562 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family D Sden_1259 Pyrrolo-quinoline quinone K17713 bamB; outer membrane protein assembly factor BamB D Sden_1736 NlpBDapX lipoprotein K07287 bamC; outer membrane protein assembly factor BamC D Sden_2864 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D Sden_1242 SmpA/OmlA K06186 bamE; outer membrane protein assembly factor BamE D Sden_1505 surface antigen (D15) K07278 tamA; translocation and assembly module TamA D Sden_1504 protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB D Sden_0636 putative lipoprotein K21449 ata; trimeric autotransporter adhesin D Sden_0491 OstA-like protein K09774 lptA; lipopolysaccharide export system protein LptA D Sden_0492 protein of unknown function DUF1239 K11719 lptC; lipopolysaccharide export system protein LptC D Sden_2885 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein D Sden_0796 Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein D Sden_0812 CBS:transporter associated K06189 corC; hemolysin (HlyC) family protein D Sden_2003 major facilitator superfamily MFS_1 K16211 malY; maltose/moltooligosaccharide transporter D Sden_3500 amino acid permease-associated region K16263 yjeH; amino acid efflux transporter D Sden_1967 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D Sden_3459 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D Sden_0576 Heavy metal efflux pump CzcA K15726 czcA; heavy metal efflux system protein D Sden_3509 Heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein D Sden_3080 Hydrophobe/amphiphile efflux-1 HAE1 K18299 mexF; multidrug efflux pump D Sden_1277 acriflavin resistance protein K18303 mexK; multidrug efflux pump D Sden_3602 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump D Sden_1738 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Sden_1587 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Sden_0304 protein of unknown function DUF6, transmembrane K15268 eamA; O-acetylserine/cysteine efflux transporter D Sden_1964 protein of unknown function DUF6, transmembrane K11939 rhtA; inner membrane transporter RhtA D Sden_0330 rarD protein K05786 rarD; chloramphenicol-sensitive protein RarD D Sden_2508 permeases-like protein K05786 rarD; chloramphenicol-sensitive protein RarD D Sden_2916 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Sden_0761 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Sden_2092 Na+/H+ antiporter NhaC K07084 yuiF; putative amino acid transporter D Sden_2574 L-lactate permease K03303 lutP; lactate permease D Sden_1362 choline/carnitine/betaine transport K02168 betT; choline/glycine/proline betaine transport protein D Sden_0495 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter D Sden_3438 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter D Sden_1520 Sodium/proline symporter K11928 putP; sodium/proline symporter D Sden_2525 sodium:dicarboxylate symporter K07862 sstT; serine/threonine transporter D Sden_1480 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D Sden_2778 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D Sden_1634 Na+/H+ antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family D Sden_3405 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D Sden_2537 Na+/H+ antiporter NhaC K18218 tet35; tetracycline resistance efflux pump D Sden_1109 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter D Sden_0368 Potassium efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D Sden_2614 Potassium efflux system protein K03455 KEA1_2_3; K+:H+ antiporter D Sden_0018 K+ transporter Trk K03498 trkH; trk/ktr system potassium uptake protein D Sden_0021 TrkA-N K03499 trkA; trk/ktr system potassium uptake protein D Sden_1641 uracil-xanthine permease K02824 uraA; uracil permease D Sden_1012 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Sden_0683 aromatic amino acid permease K03834 tyrP; tyrosine-specific transport protein D Sden_3513 aromatic amino acid transport protein K03835 mtr; tryptophan-specific transport protein D Sden_2817 Cl-channel, voltage gated K03281 clcA; chloride channel protein, CIC family D Sden_3160 Chromate transporter K07240 chrA; chromate transporter D Sden_2303 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family D Sden_2725 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Sden_1189 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins D Sden_2179 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins D Sden_2164 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein D Sden_1078 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein D Sden_2363 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein D Sden_2930 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein D Sden_1649 protein of unknown function UPF0118 K03548 perM; putative permease D Sden_0214 protein of unknown function DUF165 K09125 yhhQ; queuosine precursor transporter D Sden_1910 multiple antibiotic resistance (MarC)-related proteins K05595 marC; multiple antibiotic resistance protein D Sden_0354 Phosphopantetheine attachment site K03588 ftsW; cell division protein FtsW D Sden_0682 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Sden_2421 TonB-like protein K03832 tonB; periplasmic protein TonB D Sden_0789 TonB-like protein K03832 tonB; periplasmic protein TonB D Sden_0905 TonB-like protein K03832 tonB; periplasmic protein TonB D Sden_1395 OmpA/MotB K03640 pal; peptidoglycan-associated lipoprotein D Sden_1393 TolA K03646 tolA; colicin import membrane protein D Sden_1394 TolB-like protein K03641 tolB; TolB protein D Sden_2178 WD40-like beta Propeller K03641 tolB; TolB protein D Sden_0575 Secretion protein HlyD K15727 czcB; membrane fusion protein, heavy metal efflux system D Sden_3508 Secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system D Sden_0382 Type I secretion membrane fusion protein, HlyD K12542 lapC; membrane fusion protein, adhesin transport system D Sden_0476 secretion protein HlyD K13408 cvaA; membrane fusion protein D Sden_3079 secretion protein HlyD K18298 mexE; membrane fusion protein, multidrug efflux system D Sden_3601 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_1737 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_1586 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_2192 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_3429 Secretion protein HlyD K21137 triB; membrane fusion protein, multidrug efflux system D Sden_2319 Nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D Sden_2415 FeoA K04758 feoA; ferrous iron transport protein A D Sden_2414 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Sden_3566 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D Sden_3543 copper resistance D K07245 pcoD; copper resistance protein D D Sden_3544 copper resistance protein CopC K07156 copC; copper resistance protein C D Sden_0561 MltA-interacting MipA K07274 mipA; MipA family protein C 02044 Secretion system [BR:sdn02044] D Sden_3225 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein D Sden_0383 ABC transporter related K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Sden_0382 Type I secretion membrane fusion protein, HlyD K12542 lapC; membrane fusion protein, adhesin transport system D Sden_0381 Type I secretion outer membrane protein, TolC K12543 lapE; outer membrane protein, adhesin transport system D Sden_0476 secretion protein HlyD K13408 cvaA; membrane fusion protein D Sden_0474 colicin V processing peptidase. Cysteine peptidase. MEROPS family C39 K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Sden_2822 Peptidoglycan-binding domain 1 K02450 gspA; general secretion pathway protein A D Sden_2821 general secretion pathway protein B K02451 gspB; general secretion pathway protein B D Sden_0120 type II secretion system protein C K02452 gspC; general secretion pathway protein C D Sden_0121 type II and III secretion system protein K02453 gspD; general secretion pathway protein D D Sden_0122 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Sden_0123 General secretion pathway protein F K02455 gspF; general secretion pathway protein F D Sden_0124 General secretion pathway protein G K02456 gspG; general secretion pathway protein G D Sden_0125 General secretion pathway protein H K02457 gspH; general secretion pathway protein H D Sden_0126 General secretion pathway protein I K02458 gspI; general secretion pathway protein I D Sden_0127 General secretion pathway protein J K02459 gspJ; general secretion pathway protein J D Sden_0128 General secretion pathway protein K K02460 gspK; general secretion pathway protein K D Sden_0129 General secretion pathway L K02461 gspL; general secretion pathway protein L D Sden_0130 General secretion pathway M protein K02462 gspM; general secretion pathway protein M D Sden_0131 type II secretion system protein N K02463 gspN; general secretion pathway protein N D Sden_3391 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Sden_3388 methylation K02650 pilA; type IV pilus assembly protein PilA D Sden_3389 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Sden_3390 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Sden_2715 methylation K02655 pilE; type IV pilus assembly protein PilE D Sden_1254 Tetratricopeptide TPR_2 K02656 pilF; type IV pilus assembly protein PilF D Sden_0256 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Sden_0257 Fimbrial assembly K02663 pilN; type IV pilus assembly protein PilN D Sden_0258 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO D Sden_0259 Pilus assembly protein, PilQ K02665 pilP; type IV pilus assembly protein PilP D Sden_0260 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ D Sden_2681 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D Sden_2680 twitching motility protein K02670 pilU; twitching motility protein PilU D Sden_2719 methylation K02671 pilV; type IV pilus assembly protein PilV D Sden_2718 type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D Sden_2717 type IV pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX D Sden_2716 type IV pilin biogenesis protein, putative K02674 pilY1; type IV pilus assembly protein PilY1 D Sden_2049 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Sden_2712 type IV pilus biogenesis protein, putative K08084 fimT; type IV fimbrial biogenesis protein FimT D Sden_2713 type IV pilus biogenesis protein, putative K08085 fimU; type IV fimbrial biogenesis protein FimU D Sden_1485 AAA ATPase containing von Willebrand factor type A (vWA) domain-like protein K08086 fimV; pilus assembly protein FimV D Sden_3340 methylation K10924 mshA; MSHA pilin protein MshA D Sden_3341 methylation K10925 mshB; MSHA pilin protein MshB D Sden_3339 methylation K10926 mshC; MSHA pilin protein MshC D Sden_3338 MSHA pilin protein MshD K10927 mshD; MSHA pilin protein MshD D Sden_3344 type II secretion system protein E K12276 mshE; MSHA biogenesis protein MshE D Sden_3343 type II secretion system protein K12278 mshG; MSHA biogenesis protein MshG D Sden_3351 conserved hypothetical biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI D Sden_3349 MSHA biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ D Sden_3348 MSHA biogenesis protein MshK K12281 mshK; MSHA biogenesis protein MshK D Sden_3347 type II and III secretion system protein K12282 mshL; MSHA biogenesis protein MshL D Sden_3346 MSHA biogenesis protein MshM K12283 mshM; MSHA biogenesis protein MshM D Sden_3345 Tetratricopeptide TPR_2 K12284 mshN; MSHA biogenesis protein MshN D Sden_3337 MSHA biogenesis protein MshO precursor K12285 mshO; MSHA biogenesis protein MshO D Sden_3336 MSHA biogenesis protein MshP K12286 mshP; MSHA biogenesis protein MshP D Sden_3335 hypothetical protein K12287 mshQ; MSHA biogenesis protein MshQ D Sden_2684 protein of unknown function YGGT K02221 yggT; YggT family protein D Sden_2474 Competence protein ComEA helix-hairpin-helix region K02237 comEA; competence protein ComEA D Sden_0078 CMP/dCMP deaminase, zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Sden_2200 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Sden_0044 type III secretion FHIPEP K02400 flhA; flagellar biosynthesis protein FlhA D Sden_3668 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Sden_1340 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Sden_3667 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Sden_1339 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Sden_0043 type III secretion exporter K02401 flhB; flagellar biosynthesis protein FlhB D Sden_1353 FlhB domain protein K04061 flhB2; flagellar biosynthesis protein D Sden_0053 secretory protein YscJ/FliF K02409 fliF; flagellar M-ring protein FliF D Sden_3659 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Sden_1324 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Sden_3657 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Sden_1326 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Sden_1327 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Sden_3656 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Sden_3663 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN D Sden_1334 Flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN D Sden_0062 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN D Sden_1335 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ D Sden_0063 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Sden_3664 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Sden_1336 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Sden_0041 export protein FliQ, family 3 K02420 fliQ; flagellar biosynthesis protein FliQ D Sden_3665 export protein FliQ, family 3 K02420 fliQ; flagellar biosynthesis protein FliQ D Sden_1337 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Sden_3666 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Sden_1338 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Sden_0042 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR D Sden_0903 hypothetical protein K12049 comB9; ComB9 competence protein D Sden_0748 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Sden_3094 Curlin associated K04335 csgB; minor curlin subunit D Sden_0969 curli production assembly/transport component CsgE, putative K04337 csgE; curli production assembly/transport component CsgE D Sden_0970 curli production assembly/transport component CsgF, putative K04338 csgF; curli production assembly/transport component CsgF D Sden_0971 Curli production assembly/transport component CsgG K06214 csgG; curli production assembly/transport component CsgG D Sden_0363 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Sden_3696 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Sden_1403 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Sden_0157 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Sden_1404 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Sden_1004 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Sden_0190 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Sden_2755 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Sden_3505 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Sden_1402 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Sden_3775 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Sden_0458 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Sden_0457 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB D Sden_0456 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:sdn02042] D Sden_2757 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Sden_3417 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Sden_1768 channel protein, hemolysin III family K11068 hlyIII; hemolysin III D Sden_1096 lipolytic enzyme, G-D-S-L K11018 tlh; thermolabile hemolysin C 02022 Two-component system [BR:sdn02022] D Sden_2688 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Sden_2689 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Sden_1263 ATP-binding region, ATPase-like protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Sden_1264 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Sden_3539 ATP-binding region, ATPase-like protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Sden_3538 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Sden_3462 ATP-binding region, ATPase-like protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Sden_3461 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Sden_1906 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Sden_0235 ATP-binding region, ATPase-like protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D Sden_0234 response regulator receiver K07664 baeR; two-component system, OmpR family, response regulator BaeR D Sden_2984 two component transcriptional regulator, winged helix family K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D Sden_0558 ATP-binding region, ATPase-like protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D Sden_0109 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Sden_1191 Hpt sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Sden_2342 ATP-binding region, ATPase-like protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Sden_1436 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Sden_3474 histidine kinase, dimerisation and phosphoacceptor region K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D Sden_3054 histidine kinase, dimerisation and phosphoacceptor region K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D Sden_3475 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR D Sden_0848 histidine kinase internal region K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Sden_0847 transcriptional regulator, LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator D Sden_3457 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Sden_3458 nitrogen metabolism transcriptional regulator, NtrC, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Sden_3296 CheW-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Sden_1346 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Sden_3294 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Sden_0659 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Sden_1344 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Sden_3301 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Sden_1347 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Sden_2527 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Sden_2144 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Sden_1301 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Sden_1997 response regulator receiver K11443 divK; two-component system, cell cycle response regulator DivK D Sden_1321 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Sden_1322 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC D Sden_3661 sigma-54 factor, interaction region K10943 flrC; two-component system, response regulator FlrC D Sden_0601 ATP-binding region, ATPase-like protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Sden_0602 response regulator receiver protein K15012 regA; two-component system, response regulator RegA D Sden_0538 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:sdn02035] D Sden_3296 CheW-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Sden_1346 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Sden_3298 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW D Sden_1351 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Sden_1350 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Sden_0523 CheC-like protein K03409 cheX; chemotaxis protein CheX D Sden_3300 chemotaxis protein, stimulates methylation of MCP protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Sden_3299 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Sden_1302 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Sden_3301 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Sden_1347 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Sden_3294 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Sden_0659 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Sden_1344 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Sden_1345 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ D Sden_2527 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Sden_2144 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Sden_1301 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Sden_1600 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_0712 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_0099 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_1601 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_1963 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_1091 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_2891 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_2955 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3066 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3100 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3293 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3297 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Sden_3657 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Sden_1326 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Sden_1327 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Sden_3656 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Sden_1328 Flagellar export FliJ K02413 fliJ; flagellar protein FliJ D Sden_1335 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ D Sden_0063 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Sden_3664 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Sden_1336 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Sden_0041 export protein FliQ, family 3 K02420 fliQ; flagellar biosynthesis protein FliQ D Sden_3665 export protein FliQ, family 3 K02420 fliQ; flagellar biosynthesis protein FliQ D Sden_1337 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Sden_3666 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Sden_1338 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Sden_0042 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR D Sden_0044 type III secretion FHIPEP K02400 flhA; flagellar biosynthesis protein FlhA D Sden_3668 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Sden_1340 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Sden_3667 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Sden_1339 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Sden_0043 type III secretion exporter K02401 flhB; flagellar biosynthesis protein FlhB D Sden_3658 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Sden_1325 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Sden_1331 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Sden_1333 surface presentation of antigens (SPOA) protein K02416 fliM; flagellar motor switch protein FliM D Sden_3663 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN D Sden_1334 Flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN D Sden_0062 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN D Sden_0053 secretory protein YscJ/FliF K02409 fliF; flagellar M-ring protein FliF D Sden_3659 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Sden_1324 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Sden_0049 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Sden_3644 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Sden_1310 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Sden_0047 Flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Sden_3652 Flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Sden_1300 Flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Sden_0048 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Sden_3645 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Sden_1309 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Sden_0096 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Sden_3634 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Sden_1330 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Sden_0052 flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE D Sden_3660 flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE D Sden_1323 flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE D Sden_3635 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Sden_1329 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Sden_3651 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Sden_1303 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Sden_0051 putative flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Sden_3650 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Sden_1304 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Sden_0059 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Sden_3649 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Sden_1305 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Sden_3647 Flagellar basal-body rod FlgF K02391 flgF; flagellar basal-body rod protein FlgF D Sden_1307 Flagellar basal-body rod FlgF K02391 flgF; flagellar basal-body rod protein FlgF D Sden_0045 Flagellar basal body rod protein-like protein K02391 flgF; flagellar basal-body rod protein FlgF D Sden_0046 protein of unknown function DUF1078-like protein K02392 flgG; flagellar basal-body rod protein FlgG D Sden_3646 Flagellar basal-body rod FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Sden_1308 Flagellar basal-body rod FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Sden_3643 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Sden_1311 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K02395 flgJ; peptidoglycan hydrolase FlgJ D Sden_0060 protein of unknown function DUF1078-like protein K02390 flgE; flagellar hook protein FlgE D Sden_3648 flagellar basal body FlaE K02390 flgE; flagellar hook protein FlgE D Sden_1306 protein of unknown function DUF1078-like protein K02390 flgE; flagellar hook protein FlgE D Sden_3642 Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1 D Sden_1312 Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1 D Sden_3641 flagellin-like protein K02397 flgL; flagellar hook-associated protein 3 FlgL D Sden_1313 flagellin-like protein K02397 flgL; flagellar hook-associated protein 3 FlgL D Sden_3654 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D Sden_1298 FlgN K02399 flgN; flagellar biosynthesis protein FlgN D Sden_1297 protein of unknown function DUF400 K09860 flgP; outer membrane protein FlgP D Sden_0510 Sel1 K21217 motX; sodium-type polar flagellar protein MotX D Sden_1398 OmpA/MotB K21218 motY; sodium-type flagellar protein MotY D Sden_0750 protein of unknown function UPF0153 K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D Sden_3639 flagellin-like protein K02406 fliC; flagellin D Sden_1314 flagellin-like protein K02406 fliC; flagellin D Sden_1315 flagellin-like protein K02406 fliC; flagellin D Sden_3638 flagellar hook-associated 2-like protein K02407 fliD; flagellar hook-associated protein 2 D Sden_1317 flagellar hook-associated 2-like protein K02407 fliD; flagellar hook-associated protein 2 D Sden_3637 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Sden_1319 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Sden_3633 RNA polymerase sigma factor, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Sden_1343 RNA polymerase sigma factor, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Sden_2568 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Sden_3632 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Sden_2567 OmpA/MotB K02557 motB; chemotaxis protein MotB D Sden_3631 OmpA/MotB K02557 motB; chemotaxis protein MotB D Sden_1320 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Sden_1321 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Sden_1322 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC D Sden_3661 sigma-54 factor, interaction region K10943 flrC; two-component system, response regulator FlrC D Sden_1299 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Sden_3653 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D Sden_1316 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG D Sden_1341 GTP-binding signal recognition particle SRP54, G-domain K02404 flhF; flagellar biosynthesis protein FlhF D Sden_1342 Cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D Sden_2681 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D Sden_2680 twitching motility protein K02670 pilU; twitching motility protein PilU D Sden_3388 methylation K02650 pilA; type IV pilus assembly protein PilA D Sden_3389 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Sden_3390 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Sden_3391 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Sden_1254 Tetratricopeptide TPR_2 K02656 pilF; type IV pilus assembly protein PilF D Sden_0260 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ D Sden_0259 Pilus assembly protein, PilQ K02665 pilP; type IV pilus assembly protein PilP D Sden_0258 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO D Sden_0257 Fimbrial assembly K02663 pilN; type IV pilus assembly protein PilN D Sden_0256 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Sden_2049 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Sden_2719 methylation K02671 pilV; type IV pilus assembly protein PilV D Sden_2718 type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D Sden_2717 type IV pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX D Sden_2716 type IV pilin biogenesis protein, putative K02674 pilY1; type IV pilus assembly protein PilY1 D Sden_2715 methylation K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:sdn04812] D Sden_3334 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Sden_2946 rod shape-determining-related protein K03569 mreB; rod shape-determining protein MreB and related proteins D Sden_0359 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Sden_1698 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Sden_0358 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Sden_1629 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Sden_1628 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Sden_1627 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Sden_3761 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Sden_1451 conserved hypothetical protein K03496 parA; chromosome partitioning protein D Sden_1349 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Sden_3760 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:sdn04147] D Sden_1428 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Sden_1196 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Sden_1791 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Sden_1793 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Sden_1085 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Sden_2081 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Sden_0773 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Sden_2091 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Sden_0422 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Sden_1182 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Sden_2735 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Sden_2985 dipeptidyl-peptidase IV. Serine peptidase. MEROPS family S09B K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D Sden_1269 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Sden_0168 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Sden_3180 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Sden_2325 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Sden_1065 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Sden_0072 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_1625 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_2934 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_3437 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_3736 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Sden_1943 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Sden_2117 Peptidyl-dipeptidase A K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D Sden_1430 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Sden_2382 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Sden_0253 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Sden_2986 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Sden_0414 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Sden_0342 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Sden_3032 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Sden_3454 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Sden_0303 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Sden_0452 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Sden_2163 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Sden_2594 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Sden_2976 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Sden_2371 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Sden_3097 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Sden_3407 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Sden_3381 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Sden_2538 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Sden_2079 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Sden_1003 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Sden_2438 Serum amyloid A protein K17310 SAA; serum amyloid A protein C 02048 Prokaryotic defense system [BR:sdn02048] D Sden_1234 type III restriction enzyme, res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Sden_1237 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Sden_1235 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Sden_0264 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Sden_0840 putative inner membrane protein K06218 relE; mRNA interferase RelE/StbE D Sden_0307 HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Sden_0306 transciptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Sden_2478 phage shock protein C, PspC K03973 pspC; phage shock protein C D Sden_2479 phage shock B K03970 pspB; phage shock protein B D Sden_0359 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Sden_1698 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Sden_3334 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Sden_2946 rod shape-determining-related protein K03569 mreB; rod shape-determining protein MreB and related proteins D Sden_3218 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Sden_3220 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Sden_2533 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Sden_2774 conserved hypothetical protein K19168 cptA; toxin CptA D Sden_2775 protein of unknown function DUF339 K09159 cptB; antitoxin CptB D Sden_1458 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Sden_1983 ATPase involved in DNA repair K19171 dndD; DNA sulfur modification protein DndD D Sden_1984 conserved hypothetical protein K19172 dndE; DNA sulfur modification protein DndE C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:sdn04090] D Sden_2985 dipeptidyl-peptidase IV. Serine peptidase. MEROPS family S09B K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D Sden_2117 Peptidyl-dipeptidase A K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] C 01504 Antimicrobial resistance genes [BR:sdn01504] D Sden_2943 aminoglycoside phosphotransferase K17880 hyg; hygromycin-B 7''-O-kinase [EC:2.7.1.119] D Sden_2537 Na+/H+ antiporter NhaC K18218 tet35; tetracycline resistance efflux pump D Sden_2490 pentapeptide repeat K18555 qnr; fluoroquinolone resistance protein D Sden_0676 peptidase M23B K02172 blaR1; bla regulator protein blaR1 D Sden_0579 peptidase M56, BlaR1 K02172 blaR1; bla regulator protein blaR1 D Sden_0677 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Sden_0578 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Sden_0558 ATP-binding region, ATPase-like protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D Sden_1263 ATP-binding region, ATPase-like protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Sden_1264 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Sden_3601 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_1737 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_1586 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_2192 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Sden_3602 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump D Sden_1738 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Sden_1587 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Sden_3079 secretion protein HlyD K18298 mexE; membrane fusion protein, multidrug efflux system D Sden_3080 Hydrophobe/amphiphile efflux-1 HAE1 K18299 mexF; multidrug efflux pump D Sden_3081 RND efflux system, outer membrane lipoprotein, NodT K18300 oprN; outer membrane protein, multidrug efflux system D Sden_1279 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D Sden_1277 acriflavin resistance protein K18303 mexK; multidrug efflux pump D Sden_3690 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Sden_1798 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Sden_3225 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sdn00537] D Sden_2976 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Sden_2371 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:sdn03100] D Sden_R0096 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Sden_R0094 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Sden_R0009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Sden_R0117 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Sden_R0046 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Sden_R0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0086 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0041 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0037 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0043 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Sden_R0069 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Sden_R0071 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Sden_R0072 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Sden_R0070 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Sden_R0068 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Sden_R0018 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Sden_R0124 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Sden_R0114 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Sden_R0056 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Sden_R0065 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Sden_R0028 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Sden_R0032 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Sden_R0029 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Sden_R0095 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Sden_R0101 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Sden_R0097 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Sden_R0098 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Sden_R0099 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Sden_R0100 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Sden_R0055 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Sden_R0111 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Sden_R0112 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Sden_R0064 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Sden_R0113 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Sden_R0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Sden_R0020 tRNA-His K14226 tRNA-His; tRNA His D Sden_R0085 tRNA-His K14226 tRNA-His; tRNA His D Sden_R0008 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Sden_R0118 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Sden_R0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Sden_R0023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0109 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0057 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0066 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Sden_R0049 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Sden_R0051 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Sden_R0053 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Sden_R0052 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Sden_R0050 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Sden_R0054 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Sden_R0030 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0026 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0104 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0034 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0079 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0080 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0081 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0082 tRNA-Met K14230 tRNA-Met; tRNA Met D Sden_R0102 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Sden_R0108 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Sden_R0021 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Sden_R0087 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Sden_R0022 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Sden_R0078 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Sden_R0059 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Sden_R0067 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Sden_R0084 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Sden_R0036 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Sden_R0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Sden_R0073 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Sden_R0012 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Sden_R0004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Sden_R0103 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Sden_R0110 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Sden_R0005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Sden_R0074 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Sden_R0075 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Sden_R0076 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Sden_R0061 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0062 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0088 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0089 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0093 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0091 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0090 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0092 tRNA-Val K14237 tRNA-Val; tRNA Val D Sden_R0044 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0119 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0127 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0107 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0122 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Sden_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0126 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0116 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0016 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0106 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0047 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0121 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Sden_R0115 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0125 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0105 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0011 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0120 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0017 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0048 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Sden_R0083 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Sden_R0014 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Sden_R0042 ssrA; prediction based on tmRNA website at Indiana University K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Sden_1372 3-beta hydroxysteroid dehydrogenase/isomerase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412] D Sden_0975 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D Sden_3551 glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D Sden_1900 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D Sden_1387 Alcohol dehydrogenase, zinc-binding K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D Sden_2224 (2Fe-2S)-binding K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D Sden_2223 Twin-arginine translocation pathway signal K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D Sden_0100 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D Sden_0411 Alcohol dehydrogenase, zinc-binding K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Sden_3478 (Acyl-carrier protein) phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D Sden_3011 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D Sden_1784 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Sden_2304 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D Sden_0635 glutathione S-transferase-like protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D Sden_2345 Twin-arginine translocation pathway signal K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D Sden_0005 Di-haem cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D Sden_1733 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Sden_1360 thiol peroxidase (atypical 2-Cys peroxiredoxin) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Sden_3012 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Sden_0377 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D Sden_2894 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D Sden_3746 Pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Sden_2950 Pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Sden_2896 oxidoreductase FAD/NAD(P)-binding K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Sden_1646 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D Sden_1420 ribonucleoside-triphosphate reductase class III activase subunit K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D Sden_2407 Pyruvate formate-lyase activating K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Sden_1202 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Sden_3368 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D Sden_2519 3-oxoacyl-(acyl-carrier protein) synthase K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D Sden_0811 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Sden_2760 GCN5-related N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D Sden_0755 GCN5-related N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D Sden_1474 GCN5-related N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D Sden_3557 Acetyltransferase, GNAT family K03830 yafP; putative acetyltransferase [EC:2.3.1.-] D Sden_1837 Leucyltransferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D Sden_2350 transglutaminase-like protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D Sden_1836 Arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D Sden_1369 putative 3-oxoacyl-(acyl-carrier-protein) synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20] D Sden_1780 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D Sden_2613 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D Sden_3493 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D Sden_1079 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Sden_0988 ApbE-like lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Sden_2010 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D Sden_0702 Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D Sden_0539 serine/threonine protein kinase K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1] D Sden_0073 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Sden_0074 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Sden_1390 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Sden_1051 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Sden_2449 PHP-like protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Sden_1534 phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Sden_0663 response regulator receiver K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Sden_3723 response regulator receiver modulated metal dependent phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Sden_2399 metal dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Sden_0215 metal dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Sden_2973 Deoxyribonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D Sden_0454 Sec-independent protein translocase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Sden_2048 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Sden_1022 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Sden_1987 alpha/beta hydrolase fold K01175 ybfF; esterase [EC:3.1.-.-] D Sden_3256 glycoside hydrolase, family 24 K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D Sden_2031 alpha amylase, catalytic region K21575 susA; neopullulanase [EC:3.2.1.135] D Sden_1697 N-acetylmuramoyl-L-alanine amidase, family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Sden_2912 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Sden_0024 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Sden_0898 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Sden_2843 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Sden_3328 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D Sden_1651 conserved hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135] D Sden_0693 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25] D Sden_2299 maf protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D Sden_1528 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Sden_2348 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Sden_1370 alpha/beta hydrolase fold K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114] D Sden_2235 protein of unknown function UPF0031 K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Sden_2207 peptidylprolyl isomerase, FKBP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D Sden_1371 AMP-dependent synthetase and ligase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1] D Sden_0656 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D Sden_1866 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Sden_1865 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Sden_1864 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Sden_0982 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D Sden_0983 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D Sden_0984 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D Sden_0985 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D Sden_0986 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D Sden_0987 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D Sden_1846 Heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism D Sden_3169 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D Sden_1962 CBS domain protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D Sden_1954 ferredoxin K11107 yfaE; ferredoxin D Sden_1867 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Sden_1868 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Sden_1863 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Sden_3764 flavodoxin/nitric oxide synthase K06205 mioC; MioC protein D Sden_1459 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D Sden_1979 von Willebrand factor, type A K02448 norD; nitric oxide reductase NorD protein D Sden_1968 cytochrome c oxidase, subunit III K02164 norE; nitric oxide reductase NorE protein D Sden_1978 ATPase associated with various cellular activities, AAA_5 K04748 norQ; nitric oxide reductase NorQ protein D Sden_1496 periplasmic nitrate reductase chaperone NapD K02570 napD; periplasmic nitrate reductase NapD D Sden_2598 ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF D Sden_1495 periplasmic nitrate reductase NapE K02571 napE; periplasmic nitrate reductase NapE D Sden_1990 Flavodoxin, long chain K03839 fldA; flavodoxin I D Sden_1499 periplasmic nitrate reductase subunit NapC K02569 napC; cytochrome c-type protein NapC D Sden_2539 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Sden_2517 protein of unknown function DUF540 K06203 cysZ; CysZ protein D Sden_1377 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein D Sden_2682 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein D Sden_1154 conserved hypothetical protein K22479 argA; N-acetyltransferase D Sden_3121 GCN5-related N-acetyltransferase K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D Sden_1755 protein of unknown function DUF1049 K08992 lapA; lipopolysaccharide assembly protein A D Sden_1756 conserved hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B D Sden_0207 glycosyl transferase, family 25 K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism D Sden_0385 HemY-like protein K02498 hemY; HemY protein D Sden_0459 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D Sden_0460 protein of unknown function DUF1243 K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D Sden_0405 protein of unknown function DUF526 K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D Sden_1040 conserved hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D Sden_0212 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D Sden_1015 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D Sden_0585 HpcH/HpaI aldolase K23376 sbnG; staphyloferrin B biosynthesis citrate synthase C 99999 Others D Sden_0782 DoxX K15977 K15977; putative oxidoreductase D Sden_2138 Carboxylesterase K06999 K06999; phospholipase/carboxylesterase D Sden_1877 GCN5-related N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D Sden_1832 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Sden_0927 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Sden_2285 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Sden_0467 regulator of RpoD, Rsd/AlgQ K07740 rsd; regulator of sigma D D Sden_2905 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2 D Sden_0243 RNA binding S1 K06959 tex; protein Tex C 99974 Translation D Sden_3292 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Sden_1833 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D Sden_2496 trigger factor K03545 tig; trigger factor D Sden_2344 Ferric reductase-like transmembrane component-like K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D Sden_1239 SsrA-binding protein K03664 smpB; SsrA-binding protein D Sden_3421 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein D Sden_2041 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D Sden_3528 HesB/YadR/YfhF K07400 nfuA; Fe/S biogenesis protein NfuA D Sden_2226 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor D Sden_2190 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D Sden_1767 methylated-DNA-(protein)-cysteine S-methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D Sden_2558 5'-3' exonuclease K01146 xni; protein Xni D Sden_0326 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Sden_2346 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC D Sden_0272 protein of unknown function UPF0102 K07460 yraN; putative endonuclease D Sden_0115 Excinuclease ABC, C subunit-like protein K07461 K07461; putative endonuclease D Sden_0026 DNA processing protein DprA, putative K04096 smf; DNA processing protein D Sden_1745 Recombination protein MgsA K07478 ycaJ; putative ATPase D Sden_0028 DNA topoisomerase I K07479 yrdD; putative DNA topoisomerase D Sden_0238 Integrase, catalytic region K07482 K07482; transposase, IS30 family D Sden_0037 Integrase, catalytic region K07482 K07482; transposase, IS30 family D Sden_0038 Integrase, catalytic region K07482 K07482; transposase, IS30 family D Sden_0401 Integrase, catalytic region K07482 K07482; transposase, IS30 family D Sden_2262 Integrase, catalytic region K07482 K07482; transposase, IS30 family D Sden_3589 Integrase, catalytic region K07482 K07482; transposase, IS30 family D Sden_1574 Integrase, catalytic region K07482 K07482; transposase, IS30 family D Sden_1879 Integrase, catalytic region K07482 K07482; transposase, IS30 family D Sden_1572 transposase IS3/IS911 K07483 K07483; transposase D Sden_0424 transposase IS3/IS911 K07483 K07483; transposase D Sden_0593 putative glycine betaine/choline/proline transport system permease protein K07483 K07483; transposase D Sden_0366 putative glycine betaine/choline/proline transport system permease protein K07483 K07483; transposase D Sden_1050 transposase IS3/IS911 K07483 K07483; transposase D Sden_1139 putative glycine betaine/choline/proline transport system permease protein K07483 K07483; transposase D Sden_3020 transposase IS3/IS911 K07483 K07483; transposase D Sden_3490 putative glycine betaine/choline/proline transport system permease protein K07483 K07483; transposase D Sden_0592 transposase IS116/IS110/IS902 K07486 K07486; transposase D Sden_1134 transposase IS116/IS110/IS902 K07486 K07486; transposase D Sden_3445 transposase IS116/IS110/IS902 K07486 K07486; transposase D Sden_1332 transposase IS116/IS110/IS902 K07486 K07486; transposase D Sden_0881 transposase IS116/IS110/IS902 K07486 K07486; transposase D Sden_3311 transposase IS116/IS110/IS902 K07486 K07486; transposase D Sden_3360 transposase IS116/IS110/IS902 K07486 K07486; transposase D Sden_3681 transposase IS116/IS110/IS902 K07486 K07486; transposase D Sden_2806 transposase IS116/IS110/IS902 K07486 K07486; transposase D Sden_0199 transposase IS116/IS110/IS902 K07486 K07486; transposase D Sden_0364 transposase, mutator type K07493 K07493; putative transposase D Sden_3720 transposase, mutator type K07493 K07493; putative transposase D Sden_2058 transposase, mutator type K07493 K07493; putative transposase D Sden_2176 transposase, mutator type K07493 K07493; putative transposase D Sden_0425 Integrase, catalytic region K07497 K07497; putative transposase D Sden_1179 ISSod2, transposase OrfA K07497 K07497; putative transposase D Sden_3021 Integrase, catalytic region K07497 K07497; putative transposase D Sden_1049 Integrase, catalytic region K07497 K07497; putative transposase D Sden_0594 Integrase, catalytic region K07497 K07497; putative transposase D Sden_0365 Integrase, catalytic region K07497 K07497; putative transposase D Sden_1140 Integrase, catalytic region K07497 K07497; putative transposase D Sden_1475 Integrase, catalytic region K07497 K07497; putative transposase D Sden_1571 Integrase, catalytic region K07497 K07497; putative transposase D Sden_2068 Integrase, catalytic region K07497 K07497; putative transposase D Sden_2168 Integrase, catalytic region K07497 K07497; putative transposase D Sden_3491 Integrase, catalytic region K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Sden_2480 phage shock protein A, PspA K03969 pspA; phage shock protein A D Sden_1410 Rhodanese-like protein K03972 pspE; phage shock protein E D Sden_1111 protein of unknown function DUF450 K07504 K07504; predicted type IV restriction endonuclease D Sden_2380 conserved hypothetical protein 103 K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Sden_2608 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Sden_2193 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Sden_2194 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Sden_3303 Amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D Sden_0945 Amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D Sden_1357 Amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D Sden_0691 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Sden_0149 Sodium/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Sden_2730 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Sden_0617 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Sden_0649 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Sden_0746 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D Sden_1023 nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D Sden_1467 intracellular septation protein A K06190 ispZ; intracellular septation protein D Sden_3112 acylneuraminate cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF D Sden_3699 peptidase M23B K22719 envC; murein hydrolase activator C 99993 Cell motility D Sden_2914 conserved hypothetical protein K07337 K07337; penicillin-binding protein activator D Sden_1514 Syd K15723 syd; SecY interacting protein Syd C 99995 Signaling proteins D Sden_3385 signaling modulator of AmpD, AmpE K03807 ampE; AmpE protein D Sden_1721 ProQ activator of osmoprotectant transporter ProP K03607 proQ; ProP effector D Sden_0976 UspA K06149 uspA; universal stress protein A D Sden_1842 UspA K14055 uspE; universal stress protein E D Sden_3443 hypothetical protein K14055 uspE; universal stress protein E D Sden_2938 universal stress protein family K14055 uspE; universal stress protein E D Sden_3455 GTP-binding protein TypA K06207 typA; GTP-binding protein D Sden_3373 Anti-sigma factor ChrR, putative K07167 chrR; putative transcriptional regulator D Sden_3288 CBS domain protein K07168 K07168; CBS domain-containing membrane protein D Sden_0814 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Sden_0537 PhoH-like protein K07175 phoH2; PhoH-like ATPase D Sden_1638 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase D Sden_0690 SH3, type 3 K07184 ygiM; SH3 domain protein D Sden_1031 membrane protein K07186 smp; membrane protein D Sden_0770 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D Sden_1744 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D Sden_0918 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D Sden_1355 VacJ-like lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D Sden_1838 17 kDa surface antigen K06077 slyB; outer membrane lipoprotein SlyB D Sden_1563 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein D Sden_1203 peptidase M23B K06194 nlpD; lipoprotein NlpD D Sden_1020 TPR repeat K05803 nlpI; lipoprotein NlpI D Sden_2589 OmpW K07275 ompW; outer membrane protein D Sden_0514 protein of unknown function DUF481 K07283 ydiY; putative salt-induced outer membrane protein D Sden_1087 protein of unknown function DUF481 K07283 ydiY; putative salt-induced outer membrane protein D Sden_0774 lipoprotein, putative K07286 yajG; uncharacterized lipoprotein D Sden_2024 AsmA K07289 asmA; AsmA protein D Sden_3072 protein of unknown function DUF107 K07340 ybbJ; inner membrane protein D Sden_2852 Secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein D Sden_2360 protein of unknown function UPF0118 K11744 tqsA; AI-2 transport protein TqsA D Sden_3573 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE D Sden_3567 Tetratricopeptide region K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Sden_1255 conserved hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D Sden_2581 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Sden_3217 BFD-like (2Fe-2S)-binding region K02192 bfd; bacterioferritin-associated ferredoxin D Sden_0417 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D Sden_2889 ApaG K06195 apaG; ApaG protein D Sden_0389 Frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY D Sden_2218 periplasmic copper-binding K07218 nosD; nitrous oxidase accessory protein D Sden_0791 heme utilization protein HuvX K07227 chuX; heme iron utilization protein D Sden_0722 imelysin. Metallo peptidase. MEROPS family M75 K07231 K07231; putative iron-regulated protein D Sden_3545 copper resistance B precursor K07233 pcoB; copper resistance protein B D Sden_2837 NnrS K07234 K07234; uncharacterized protein involved in response to NO D Sden_2215 NosL K19342 nosL; copper chaperone NosL B B 09194 Poorly characterized C 99996 General function prediction only D Sden_1489 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D Sden_3077 GCN5-related N-acetyltransferase K02348 elaA; ElaA protein D Sden_3707 transport-associated K04065 osmY; hyperosmotically inducible periplasmic protein D Sden_0031 globin K06886 glbN; hemoglobin D Sden_0373 globin K06886 glbN; hemoglobin D Sden_3379 Patatin K07001 K07001; NTE family protein D Sden_2547 Patatin K07001 K07001; NTE family protein D Sden_1418 Patatin K07001 K07001; NTE family protein D Sden_3101 Patatin K07001 K07001; NTE family protein D Sden_2815 HesB/YadR/YfhF K15724 erpA; iron-sulfur cluster insertion protein D Sden_3448 tRNA-processing RNAse BN K07058 K07058; membrane protein D Sden_0418 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA D Sden_0752 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE D Sden_2100 Rhodanese-like protein K07146 K07146; UPF0176 protein D Sden_1827 protein of unknown function DUF489 K07153 hflD; high frequency lysogenization protein D Sden_3606 lemA protein K03744 lemA; LemA protein D Sden_2911 SlyX K03745 slyX; SlyX protein D Sden_0027 protein of unknown function DUF494 K03747 smg; Smg protein D Sden_2098 CreA K05805 creA; CreA protein D Sden_2972 protein of unknown function DUF335, SprT K02742 sprT; SprT protein D Sden_1488 Sporulation related K03749 dedD; DedD protein D Sden_0263 Sporulation related K03112 damX; DamX protein D Sden_1717 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D Sden_1718 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D Sden_2840 protein of unknown function DUF368 K08974 K08974; putative membrane protein D Sden_3321 conserved hypothetical protein K08984 yjdF; putative membrane protein D Sden_2475 conserved hypothetical protein 1620 K08990 ycjF; putative membrane protein D Sden_2119 metal-binding protein K09858 K09858; SEC-C motif domain protein D Sden_1453 phosphate-starvation-inducible E K13256 psiE; protein PsiE D Sden_1233 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D Sden_3488 hypothetical protein K06867 K06867; uncharacterized protein D Sden_3599 hypothetical protein K06889 K06889; uncharacterized protein D Sden_3001 GPW/gp25 K06903 W; Bacteriophage baseplate protein W D Sden_3007 conserved hypothetical protein K06907 FI; Bacteriophage tail sheath protein D Sden_2477 protein of unknown function DUF463, YcjX-like protein K06918 K06918; uncharacterized protein D Sden_2880 protein of unknown function DUF1289 K06938 K06938; uncharacterized protein D Sden_1367 protein of unknown function DUF1289 K06938 K06938; uncharacterized protein D Sden_2035 protein of unknown function DUF1289 K06938 K06938; uncharacterized protein D Sden_1508 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Sden_3703 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Sden_2221 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Sden_3370 amine oxidase K06954 K06954; uncharacterized protein D Sden_2639 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein D Sden_2967 peptidase C39, bacteriocin processing K06992 K06992; uncharacterized protein D Sden_3512 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein D Sden_2036 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein D Sden_3221 protein of unknown function UPF0227 K07000 K07000; uncharacterized protein D Sden_1728 conserved hypothetical protein K07003 K07003; uncharacterized protein D Sden_2906 Endonuclease/exonuclease/phosphatase K07004 K07004; uncharacterized protein D Sden_2272 Endonuclease/exonuclease/phosphatase K07004 K07004; uncharacterized protein D Sden_2337 sulfatase K07014 K07014; uncharacterized protein D Sden_3186 alpha/beta hydrolase fold K07019 K07019; uncharacterized protein D Sden_2564 conserved hypothetical protein K07020 K07020; uncharacterized protein D Sden_3177 conserved hypothetical protein K07070 K07070; uncharacterized protein D Sden_2362 conserved hypothetical protein K07071 K07071; uncharacterized protein D Sden_0703 protein of unknown function DUF897 K07086 K07086; uncharacterized protein D Sden_3409 permease K07089 K07089; uncharacterized protein D Sden_2430 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Sden_0613 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Sden_2507 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Sden_2780 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Sden_0611 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Sden_2951 protein of unknown function DUF839 K07093 K07093; uncharacterized protein D Sden_0725 hypoxanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein D Sden_2892 putative NADH-flavin reductase K07118 K07118; uncharacterized protein D Sden_0273 LppC putative lipoprotein K07121 K07121; uncharacterized protein D Sden_2457 Sel1 K07126 K07126; uncharacterized protein D Sden_1133 Sel1 K07126 K07126; uncharacterized protein D Sden_3189 Sel1-like protein K07126 K07126; uncharacterized protein D Sden_0298 conserved hypothetical protein K07133 K07133; uncharacterized protein D Sden_3440 Uncharacterized relative of glutathione S-transferase MAPEG superfamily-like protein K07136 K07136; uncharacterized protein D Sden_2210 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein D Sden_3375 conserved hypothetical protein K07157 K07157; uncharacterized protein D Sden_0481 ATP-dependent protease La (LON) domain protein, putative K07157 K07157; uncharacterized protein D Sden_3776 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Sden_2832 GatB/Yqey K09117 K09117; uncharacterized protein D Sden_0869 protein of unknown function DUF493 K09158 K09158; uncharacterized protein D Sden_1632 Uncharacterised conserved protein UCP006173 K09160 K09160; uncharacterized protein D Sden_3369 protein of unknown function DUF1365 K09701 K09701; uncharacterized protein D Sden_2978 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Sden_2276 protein of unknown function DUF188 K09768 K09768; uncharacterized protein D Sden_1466 YCII-related K09780 K09780; uncharacterized protein D Sden_1821 protein of unknown function DUF808 K09781 K09781; uncharacterized protein D Sden_1637 protein of unknown function DUF444 K09786 K09786; uncharacterized protein D Sden_2383 protein of unknown function DUF454 K09790 K09790; uncharacterized protein D Sden_2197 protein of unknown function DUF343 K09791 K09791; uncharacterized protein D Sden_1844 conserved hypothetical protein K09792 K09792; uncharacterized protein D Sden_0577 conserved hypothetical protein K09794 K09794; uncharacterized protein D Sden_2104 protein of unknown function DUF541 K09797 K09797; uncharacterized protein D Sden_3701 protein of unknown function DUF610, YibQ K09798 K09798; uncharacterized protein D Sden_1241 protein of unknown function UPF0125 K09801 K09801; uncharacterized protein D Sden_0947 protein of unknown function DUF541 K09807 K09807; uncharacterized protein D Sden_0989 protein of unknown function DUF539 K05952 K05952; uncharacterized protein D Sden_2281 conserved hypothetical protein K00243 K00243; uncharacterized protein D Sden_0667 protein of unknown function DUF330 K09857 K09857; uncharacterized protein D Sden_2913 Tetratricopeptide TPR_2 K09859 K09859; uncharacterized protein D Sden_2729 protein of unknown function DUF328 K09861 K09861; uncharacterized protein D Sden_3394 protein of unknown function DUF329 K09862 K09862; uncharacterized protein D Sden_1190 protein of unknown function DUF416 K09891 K09891; uncharacterized protein D Sden_3624 conserved hypothetical protein K09894 K09894; uncharacterized protein D Sden_0830 YgfB and YecA K09895 K09895; uncharacterized protein D Sden_2310 conserved hypothetical protein K09897 K09897; uncharacterized protein D Sden_3187 protein of unknown function UPF0270 K09898 K09898; uncharacterized protein D Sden_2408 protein of unknown function DUF412 K09899 K09899; uncharacterized protein D Sden_1630 protein of unknown function DUF709 K09902 K09902; uncharacterized protein D Sden_2336 protein of unknown function DUF1414 K09904 K09904; uncharacterized protein D Sden_2377 protein of unknown function DUF991 K09907 K09907; uncharacterized protein D Sden_2432 conserved hypothetical protein K09909 K09909; uncharacterized protein D Sden_2907 Uncharacterised conserved protein UCP006287 K09910 K09910; uncharacterized protein D Sden_1759 conserved hypothetical protein K09912 K09912; uncharacterized protein D Sden_2282 protein of unknown function DUF480 K09915 K09915; uncharacterized protein D Sden_1903 protein of unknown function DUF1315 K09916 K09916; uncharacterized protein D Sden_1719 YebG K09918 K09918; uncharacterized protein D Sden_1656 protein of unknown function DUF482 K09919 K09919; uncharacterized protein D Sden_3223 protein of unknown function DUF1249 K09920 K09920; uncharacterized protein D Sden_0392 protein of unknown function DUF484 K09921 K09921; uncharacterized protein D Sden_2696 protein of unknown function DUF469 K09923 K09923; uncharacterized protein D Sden_1847 conserved hypothetical protein K09926 K09926; uncharacterized protein D Sden_3291 protein of unknown function DUF1006 K09927 K09927; uncharacterized protein D Sden_2201 conserved hypothetical protein K09928 K09928; uncharacterized protein D Sden_2385 conserved hypothetical protein K09929 K09929; uncharacterized protein D Sden_2386 protein of unknown function DUF692 K09930 K09930; uncharacterized protein D Sden_0967 protein of unknown function DUF692 K09930 K09930; uncharacterized protein D Sden_0508 hypothetical protein K09937 K09937; uncharacterized protein D Sden_1642 conserved hypothetical protein K09938 K09938; uncharacterized protein D Sden_3126 conserved hypothetical protein K09939 K09939; uncharacterized protein D Sden_2152 PepSY-associated TM helix K09939 K09939; uncharacterized protein D Sden_2233 protein of unknown function DUF1415 K09941 K09941; uncharacterized protein D Sden_1250 conserved hypothetical protein K09954 K09954; uncharacterized protein D Sden_2590 protein of unknown function DUF925 K09962 K09962; uncharacterized protein D Sden_0767 transporter K09964 K09964; uncharacterized protein D Sden_0672 GumN K09973 K09973; uncharacterized protein D Sden_1080 protein of unknown function DUF886 K09975 K09975; uncharacterized protein D Sden_2112 Uncharacterised conserved protein UCP025560 K09978 K09978; uncharacterized protein D Sden_0698 conserved hypothetical protein K09980 K09980; uncharacterized protein D Sden_0562 conserved hypothetical protein K09983 K09983; uncharacterized protein D Sden_2007 hypothetical protein K09986 K09986; uncharacterized protein D Sden_0692 protein of unknown function DUF47 K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 13, 2024