+C Secretion system KO
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Secretion System - Stenotrophomonas maltophilia D457
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AType I secretion system
B alpha-Hemolysin/cyclolysin transporter
C SMD_3531 tolC; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
B RTX toxin transporter
C SMD_3531 tolC; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
B Multiple protein transporter
C SMD_3531 tolC; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
B Adhesin protein transporter
B RaxAB-RaxC type I secretion system protein
C SMD_3373 hypothetical protein K13408 cvaA; membrane fusion protein
C SMD_3374 colicin V secretion ABC transporter ATP-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
C SMD_3531 tolC; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
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AType II secretion system
B General secretion pathway protein
C SMD_2401 gspC; hypothetical protein K02452 gspC; general secretion pathway protein C
C SMD_0590 xpsD; General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) K02453 gspD; general secretion pathway protein D
C SMD_2409 gspD; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
C SMD_0580 xpsE; General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
C SMD_2408 gspE; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
C SMD_4168 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
C SMD_0581 xpsF; General secretion pathway protein F / Type II secretory pathway, component PulF K02455 gspF; general secretion pathway protein F
C SMD_2407 gspF; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
C SMD_0582 xpsG; General secretion pathway protein G K02456 gspG; general secretion pathway protein G
C SMD_2413 gspG; General secretion pathway protein G K02456 gspG; general secretion pathway protein G
C SMD_0583 xpsH; General secretion pathway protein H K02457 gspH; general secretion pathway protein H
C SMD_2402 gspH; General secretion pathway protein H K02457 gspH; general secretion pathway protein H
C SMD_0584 xpsI; General secretion pathway protein I K02458 gspI; general secretion pathway protein I
C SMD_2403 gspI; General secretion pathway protein I K02458 gspI; general secretion pathway protein I
C SMD_0585 xpsJ; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
C SMD_2404 gspJ; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
C SMD_0586 pefK; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
C SMD_2412 gspK; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
C SMD_0587 pefL; General secretion pathway protein L K02461 gspL; general secretion pathway protein L
C SMD_2411 gspL; General secretion pathway protein L K02461 gspL; general secretion pathway protein L
C SMD_0588 xpsM; General secretion pathway protein M K02462 gspM; general secretion pathway protein M
C SMD_2410 gspM; General secretion pathway protein M K02462 gspM; general secretion pathway protein M
C SMD_0589 xpsN; General secretion pathway protein N K02463 gspN; general secretion pathway protein N
C SMD_3361 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
B Pilin secretion/fimbrial assembly protein
C SMD_3359 pilA; Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
C SMD_3781 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
C SMD_3358 pilB; Type IV fimbrial assembly, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
C SMD_3360 pilC; Type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
C SMD_3361 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C SMD_1452 pilE; Type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
C SMD_1851 pilF; Type IV pilus biogenesis protein PilF K02656 pilF; type IV pilus assembly protein PilF
C SMD_3241 pilG; twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
C SMD_3170 pilH; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
C SMD_3240 pilH2; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
C SMD_3239 pilI; type IV pili signal transduction protein PilI K02659 pilI; twitching motility protein PilI
C SMD_3238 pilJ; pilus biogenesis protein K02660 pilJ; twitching motility protein PilJ
C SMD_3428 pilM; Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
C SMD_3427 pilN; Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
C SMD_3426 pilO; Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
C SMD_3425 pilP; Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
C SMD_3424 pilQ; Type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
C SMD_1013 pilT; Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
C SMD_0523 Type II secretion system protein-like protein K02670 pilU; twitching motility protein PilU
C SMD_1014 pilU; twitching motility protein K02670 pilU; twitching motility protein PilU
C SMD_1448 pilV; Type IV fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV
C SMD_1449 pilW; Type IV fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
C SMD_1450 pilX; Type IV fimbrial biogenesis protein PilX K02673 pilX; type IV pilus assembly protein PilX
C SMD_1451 pilY1; Type IV fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
C SMD_0986 pilZ; Type IV pilus biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
C SMD_1447 fimU; Type IV fimbrial biogenesis protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT
C SMD_1454 fimT; Type IV fimbrial biogenesis protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT
C SMD_3002 fimV; FimV protein K08086 fimV; pilus assembly protein FimV
B Tight adherence (Tad) export apparatus
C SMD_2506 probable prepilin peptidase transmembrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
C SMD_0954 SAF domain K02279 cpaB; pilus assembly protein CpaB
C SMD_2508 Flp pilus assembly protein RcpC/CpaB K02279 cpaB; pilus assembly protein CpaB
C SMD_0953 Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
C SMD_2509 Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
C SMD_2510 Probable pilus assembly protein K02282 cpaE; pilus assembly protein CpaE
C SMD_0952 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C SMD_2511 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C SMD_0951 type II secretion system protein K12510 tadB; tight adherence protein B
C SMD_2512 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
C SMD_0950 Type II/IV secretion system protein TadC,associated with Flp pilus assembly K12511 tadC; tight adherence protein C
C SMD_2513 type II secretion system protein K12511 tadC; tight adherence protein C
C SMD_2514 Flp pilus assembly protein TadD, contains TPR repeats K27079 tadD; tight adherence protein D
C SMD_2516 hypothetical protein K27080 tadG; tight adherence protein G
C SMD_2505 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
C SMD_0960 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
B Toxin co-regulated pilus biosynthesis protein
B MSHA pilus biogenesis protein
B Type IVa pilus homolog protein
C SMD_3361 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C SMD_1013 pilT; Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
B Archaeal flagellar protein
B Competence-related DNA transformation transporter (DNA-T) core components
C SMD_1057 DNA uptake protein and related DNA-binding proteins K02237 comEA; competence protein ComEA
C SMD_1463 Predicted hydrolase of the metallo-beta-lactamase superfamily, clustered with KDO2-Lipid A biosynthesis genes K02238 comEC; competence protein ComEC
B Competence-related DNA transformation transporter (DNA-T) related proteins
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AType III secretion system
B Type III secretion core apparatus
B Type III secretion related proteins
B Flagellar export apparatus
C SMD_2049 flhA; Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
C SMD_2050 flhB; Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
C SMD_2064 fliF; Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
C SMD_2062 fliH; Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
C SMD_2061 fliI; Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
C SMD_2056 fliN; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
C SMD_2055 fliO; Flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
C SMD_2054 fliP; Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
C SMD_2053 fliQ; Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
C SMD_2052 fliR; Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
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AType IV secretion system
B Conjugal DNA-protein transfer (VirB/D) protein
C SMD_2635 Bores hole in peptidoglycan layer allowing type IV secretion complex assembly to occur (VirB1) K03194 virB1; type IV secretion system protein VirB1
C SMD_2634 Major pilus subunit of type IV secretion complex (VirB2) K03197 virB2; type IV secretion system protein VirB2
C SMD_2633 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3) K03198 virB3; type IV secretion system protein VirB3
C SMD_2632 virB4; ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
C SMD_2630 trwI; Integral inner membrane protein of type IV secretion complex (VirB6) K03201 virB6; type IV secretion system protein VirB6
C SMD_2639 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8) K03203 virB8; type IV secretion system protein VirB8
C SMD_2638 virB9; Forms the bulk of type IV secretion complex that spans outer membrane and periplasm (VirB9) K03204 virB9; type IV secretion system protein VirB9
C SMD_2637 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) K03195 virB10; type IV secretion system protein VirB10
C SMD_2636 virB11; ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB11) K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
C SMD_0920 virD4; Type IV secretion system protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
C SMD_2641 virD4; Type IV secretion system protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B DNA uptake competence system protein
B Conjugal transfer pilus assembly protein
C SMD_1575 Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like K12055 K12055; chromosome partitioning related protein ParA
C SMD_1505 Pyruvate/2-oxoglutarate dehydrogenase complex,dihydrolipoamide acyltransferase (E2) component, and related enzymes K12070 traI; conjugal transfer pilus assembly protein TraI
C SMD_1535 Type IV secretory pathway, VirD4 components K12071 traD; conjugal transfer pilus assembly protein TraD
C SMD_0574 dsbC; Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
B Pertussis toxin exporter
B Cag pathogenicity island (PAI) protein
B Icm/Dot secretion system protein
B Trb secretion system protein
C SMD_0922 trbB; Conjugative transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
C SMD_0923 trbC; Conjugative transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
C SMD_0924 trbD; Conjugative transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD
C SMD_0925 trbE; Conjugative transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
C SMD_0929 trbF; Conjugative transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
C SMD_0930 trbG; Conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
C SMD_0931 trbI; Conjugative transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
C SMD_0926 trbJ; Conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
C SMD_0928 trbL; Conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
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AType V secretion system
B Autotransporter-1 (AT-1) family
C SMD_0759 hypothetical protein K12678 aidA-I; autotransporter family porin
C SMD_0623 putative autotransporter K12678 aidA-I; autotransporter family porin
C SMD_0624 Putative ATP-binding component of a transport system and adhesin protein K12678 aidA-I; autotransporter family porin
C SMD_3562 hypothetical protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
C SMD_3735 hypothetical protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
C SMD_3376 Phospholipase/lecithinase/hemolysin K12686 apeE; outer membrane lipase/esterase
B Autotransporter-2 (AT-2) family
B Two-partner secretion (TPS) family
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AType VI secretion system
B Imp/Vas secretion system core components
B Imp/Vas secretion system related proteins
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AType VII secretion system
B ESX secretion system protein
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AChaperone-usher system
B Type 1 pilus assembly protein
C SMD_0595 fimA; Fimbrial protein precursor K07345 fimA; major type 1 subunit fimbrin (pilin)
C SMD_1339 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
C SMD_1343 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
C SMD_0597 mrkC; outer membrane usher protein precursor K07347 fimD; outer membrane usher protein
C SMD_1342 Sigma-fimbriae usher protein K07347 fimD; outer membrane usher protein
C SMD_1341 Sigma-fimbriae tip adhesin K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C SMD_1344 Sigma-fimbriae tip adhesin K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
B P pilus assembly protein
B Mat/Ecp fimbriae assembly protein
C SMD_2328 hypothetical protein K21965 ecpB; Mat/Ecp fimbriae periplasmic chaperone
C SMD_2326 CFA/I fimbrial subunit C precursor K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein
C SMD_3435 cblC; Alpha-fimbriae usher protein K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein
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AExtracellular nucleation-precipitation pathway
B Curli assembly protein
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ASec (secretion) system
B Prokaryotic Sec-SRP core components
C SMD_0651 secA; Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
C SMD_0125 secB; Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
C SMD_1811 secD; Protein-export membrane protein SecD (TC 3.A.5.1.1) K03072 secD; preprotein translocase subunit SecD
C SMD_0772 Preprotein translocase subunit SecE (TC 3.A.5.1.1) K03073 secE; preprotein translocase subunit SecE
C SMD_1812 secF; Protein-export membrane protein SecF (TC 3.A.5.1.1) K03074 secF; preprotein translocase subunit SecF
C SMD_2982 secG; Preprotein translocase subunit SecG (TC 3.A.5.1.1) K03075 secG; preprotein translocase subunit SecG
C SMD_0805 secY; Preprotein translocase secY subunit (TC 3.A.5.1.1) K03076 secY; preprotein translocase subunit SecY
C SMD_1223 ffh; Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C SMD_1743 ftsY; Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) K03110 ftsY; fused signal recognition particle receptor
C SMD_1810 yajC; Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
C SMD_4237 yidC; Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
B Prokaryotic Sec-SRP related proteins
B Eukaryotic Sec-SRP protein
C SMD_1223 ffh; Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
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ATwin-arginine translocation (Tat) system
B Twin-arginine translocation (Tat) pathway protein
C SMD_4173 tatE; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
C SMD_4172 tatB; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
C SMD_4171 tatC; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: December 11, 2023