+E Transcription factors KO
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Transcription Factors - Streptomyces niveus
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D BBN63_22475 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BBN63_22480 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BBN63_00115 DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BBN63_32240 DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D BBN63_05445 DNA-3-methyladenine glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D BBN63_06080 AraC family transcriptional regulator K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D BBN63_02115 AraC family transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D BBN63_18065 AraC family transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
C LysR family
C DeoR family
D BBN63_03130 alkaline phosphatase K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D BBN63_20240 D-beta-D-heptose 1-phosphate adenosyltransferase K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D BBN63_03760 transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
C LacI family
D BBN63_33785 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BBN63_11195 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BBN63_04065 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BBN63_31335 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BBN63_04290 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BBN63_09075 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BBN63_22995 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BBN63_18515 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BBN63_00690 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BBN63_00720 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BBN63_28350 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D BBN63_33540 LacI family transcriptional regulator K17640 bxlR; LacI family transcriptional regulator, xylobiose transport system transcriptional regulator
C GntR family
D BBN63_10560 GntR family transcriptional regulator K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator
D BBN63_17770 hypothetical protein K03710 K03710; GntR family transcriptional regulator
D BBN63_17780 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BBN63_17795 transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BBN63_20730 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BBN63_17240 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BBN63_17250 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BBN63_17390 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BBN63_27870 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BBN63_01025 hypothetical protein K03710 K03710; GntR family transcriptional regulator
D BBN63_19225 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D BBN63_19220 UTRA domain-containing protein K03710 K03710; GntR family transcriptional regulator
D BBN63_28255 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BBN63_33210 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BBN63_01520 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D BBN63_04750 GntR family transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D BBN63_12260 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BBN63_30430 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BBN63_33485 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
C TetR/AcrR family
D BBN63_15805 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D BBN63_00700 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D BBN63_00580 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D BBN63_24110 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D BBN63_00515 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D BBN63_31840 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D BBN63_14930 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D BBN63_28885 TetR family transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D BBN63_01045 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D BBN63_02200 hypothetical protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D BBN63_08510 AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D BBN63_30395 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BBN63_29625 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BBN63_13515 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
D BBN63_05885 helix-turn-helix transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D BBN63_02915 helix-turn-helix transcriptional regulator K24912 ramR; LuxR family transcriptional regulator, transcriptional activator for aerial hyphae formation
C MarR family
C MerR family
D BBN63_00835 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D BBN63_28045 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D BBN63_24150 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D BBN63_15150 heat-shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D BBN63_18115 MerR family transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D BBN63_06745 transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
C Fur family
D BBN63_18580 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D BBN63_24035 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D BBN63_10700 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D BBN63_17715 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
C IclR family
D BBN63_05755 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D BBN63_02340 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
C CRP/FNR family
D BBN63_14625 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
C Rrf2 family
C ArsR family
D BBN63_04160 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D BBN63_07355 transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D BBN63_00345 transcriptional regulator K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor
C XRE family
D BBN63_08095 transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
C PadR family
D BBN63_05470 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D BBN63_19465 dihydrofolate reductase K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D BBN63_11840 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D BBN63_27705 transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D BBN63_31105 adenylate kinase K02019 modE; molybdate transport system regulatory protein
D BBN63_13875 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D BBN63_29495 transcriptional regulator K07727 K07727; putative transcriptional regulator
D BBN63_18470 transcriptional regulator K07727 K07727; putative transcriptional regulator
D BBN63_22910 transcriptional regulator K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
D BBN63_11325 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BBN63_21615 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BBN63_12580 hypothetical protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BBN63_04665 transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BBN63_00130 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BBN63_14655 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BBN63_10525 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BBN63_10795 WhiB family transcriptional regulator K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D BBN63_18295 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D BBN63_27645 transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D BBN63_24875 hypothetical protein K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D BBN63_16780 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BBN63_18815 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D BBN63_28850 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D BBN63_23925 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D BBN63_06920 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D BBN63_29300 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D BBN63_22030 hypothetical protein K07735 algH; putative transcriptional regulator
D BBN63_15760 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D BBN63_26215 DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
D BBN63_07865 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0