+E Transcription factors KO
#
Transcription Factors - Sphingobacterium sp. DR205
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D G6053_11470 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D G6053_18360 AraC family transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D G6053_06575 AraC family transcriptional regulator K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D G6053_15695 helix-turn-helix transcriptional regulator K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D G6053_22510 helix-turn-helix transcriptional regulator K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D G6053_07295 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_07300 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_08250 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_08325 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_08590 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_09315 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_10555 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_10770 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_10775 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_13040 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_13650 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_14605 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_14725 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_14815 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_14835 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_14855 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_14935 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_15630 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_15645 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_15785 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_16400 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_16705 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_17360 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_17610 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_17990 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_18330 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_18450 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_18465 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_18520 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_18665 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_19025 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_20005 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_22175 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_23110 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_23525 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_23730 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_01570 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_01615 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_05880 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D G6053_13640 helix-turn-helix transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D G6053_14870 helix-turn-helix transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D G6053_15625 helix-turn-helix transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D G6053_15725 helix-turn-helix transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D G6053_22055 helix-turn-helix transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D G6053_15415 bifunctional transcriptional activator/DNA repair protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D G6053_05865 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D G6053_19655 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D G6053_04375 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
C DeoR family
D G6053_09510 DeoR/GlpR transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
C LacI family
D G6053_09670 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G6053_21215 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G6053_21900 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G6053_22450 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G6053_29305 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G6053_01935 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G6053_03920 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G6053_06225 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G6053_08560 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D G6053_04245 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
C GntR family
D G6053_10885 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D G6053_06980 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D G6053_24390 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D G6053_25485 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
C TetR/AcrR family
D G6053_20970 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D G6053_21015 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D G6053_17425 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D G6053_19015 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D G6053_19045 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D G6053_20340 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D G6053_12580 TetR/AcrR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
D G6053_13435 TetR/AcrR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
D G6053_17685 TetR/AcrR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
D G6053_22555 TetR/AcrR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
C Lrp/AsnC family
D G6053_12665 winged helix-turn-helix transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D G6053_02955 winged helix-turn-helix transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D G6053_13160 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D G6053_19435 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D G6053_19745 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D G6053_29195 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D G6053_05080 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
C MarR family
D G6053_23710 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D G6053_16060 MerR family DNA-binding protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C Fur family
D G6053_13800 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D G6053_25735 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
C IclR family
C CRP/FNR family
D G6053_22060 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D G6053_09240 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D G6053_06645 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D G6053_07525 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D G6053_18690 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
C ArsR family
C XRE family
C PadR family
D G6053_29320 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D G6053_24515 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D G6053_26720 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D G6053_04155 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D G6053_04555 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D G6053_05110 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D G6053_06500 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D G6053_29115 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D G6053_07320 sigma 54-interacting transcriptional regulator K15836 fhlA; formate hydrogenlyase transcriptional activator
D G6053_19890 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D G6053_08080 helix-turn-helix domain-containing protein K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
D G6053_28545 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D G6053_07900 UpxY family transcription antiterminator K05785 rfaH; transcriptional antiterminator RfaH
D G6053_02670 ROK family transcriptional regulator K02565 nagC; N-acetylglucosamine repressor
D G6053_03850 ROK family protein K02565 nagC; N-acetylglucosamine repressor
D G6053_03885 ROK family transcriptional regulator K02565 nagC; N-acetylglucosamine repressor
D G6053_09200 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D G6053_26115 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D G6053_26685 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D G6053_06685 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D G6053_14020 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D G6053_04460 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D G6053_24165 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0