+E Transcription factors KO #

  Transcription Factors - Sphingobacterium sp. DR205

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D G6053_11470 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D G6053_18360 AraC family transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D G6053_06575 AraC family transcriptional regulator K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein D G6053_15695 helix-turn-helix transcriptional regulator K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors D G6053_22510 helix-turn-helix transcriptional regulator K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB D G6053_07295 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_07300 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_08250 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_08325 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_08590 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_09315 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_10555 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_10770 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_10775 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_13040 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_13650 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_14605 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_14725 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_14815 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_14835 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_14855 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_14935 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_15630 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_15645 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_15785 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_16400 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_16705 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_17360 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_17610 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_17990 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_18330 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_18450 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_18465 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_18520 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_18665 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_19025 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_20005 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_22175 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_23110 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_23525 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_23730 helix-turn-helix transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_01570 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_01615 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_05880 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D G6053_13640 helix-turn-helix transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D G6053_14870 helix-turn-helix transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D G6053_15625 helix-turn-helix transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D G6053_15725 helix-turn-helix transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D G6053_22055 helix-turn-helix transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D G6053_15415 bifunctional transcriptional activator/DNA repair protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D G6053_05865 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] C LysR family D G6053_19655 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D G6053_04375 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family D G6053_09510 DeoR/GlpR transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor C LacI family D G6053_09670 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G6053_21215 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G6053_21900 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G6053_22450 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G6053_29305 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G6053_01935 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G6053_03920 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G6053_06225 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G6053_08560 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D G6053_04245 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG C GntR family D G6053_10885 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D G6053_06980 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D G6053_24390 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D G6053_25485 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D G6053_20970 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D G6053_21015 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D G6053_17425 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D G6053_19015 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D G6053_19045 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D G6053_20340 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D G6053_12580 TetR/AcrR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon D G6053_13435 TetR/AcrR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon D G6053_17685 TetR/AcrR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon D G6053_22555 TetR/AcrR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon C Lrp/AsnC family D G6053_12665 winged helix-turn-helix transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D G6053_02955 winged helix-turn-helix transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D G6053_13160 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D G6053_19435 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D G6053_19745 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D G6053_29195 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D G6053_05080 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D G6053_23710 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D G6053_16060 MerR family DNA-binding protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator C Fur family D G6053_13800 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D G6053_25735 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator C IclR family C CRP/FNR family D G6053_22060 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D G6053_09240 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D G6053_06645 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D G6053_07525 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D G6053_18690 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family C ArsR family C XRE family C PadR family D G6053_29320 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator C Other families D G6053_24515 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D G6053_26720 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D G6053_04155 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D G6053_04555 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D G6053_05110 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D G6053_06500 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D G6053_29115 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D G6053_07320 sigma 54-interacting transcriptional regulator K15836 fhlA; formate hydrogenlyase transcriptional activator D G6053_19890 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D G6053_08080 helix-turn-helix domain-containing protein K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D G6053_28545 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D G6053_07900 UpxY family transcription antiterminator K05785 rfaH; transcriptional antiterminator RfaH D G6053_02670 ROK family transcriptional regulator K02565 nagC; N-acetylglucosamine repressor D G6053_03850 ROK family protein K02565 nagC; N-acetylglucosamine repressor D G6053_03885 ROK family transcriptional regulator K02565 nagC; N-acetylglucosamine repressor D G6053_09200 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D G6053_26115 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D G6053_26685 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D G6053_06685 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D G6053_14020 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D G6053_04460 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D G6053_24165 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0