+F Repair protein KO
#
DNA Repair and Recombination Proteins - Solanum stenotomum
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 125855148 DNA oxidative demethylase ALKBH2 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 125872047 DExH-box ATP-dependent RNA helicase DExH14 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 125878418 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 125846724 uracil-DNA glycosylase, mitochondrial isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 125865918 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 125871914 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 125846713 methyl-CpG-binding domain protein 4-like protein isoform X1 K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 125845117 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 125870681 endonuclease III homolog 1, chloroplastic-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 125872542 endonuclease III homolog 1, chloroplastic K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 125860859 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 125860963 DNA-(apurinic or apyrimidinic site) endonuclease 2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 125864721 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 125857440 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
F 125866002 sister chromatid cohesion protein PDS5 homolog C isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
F 125852456 uncharacterized protein LOC125852456 K03505 POLD4; DNA polymerase delta subunit 4
F 125870913 uncharacterized protein LOC125870913 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 125844086 DNA polymerase epsilon catalytic subunit A-like isoform X1 K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 125860669 DNA polymerase epsilon subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 125844125 uncharacterized protein LOC125844125 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 125874562 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 125868286 flap endonuclease 1 isoform X1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 125844290 DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 125874797 DNA-repair protein XRCC1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 125859710 tyrosyl-DNA phosphodiesterase 1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 125871177 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 125876903 polynucleotide 3'-phosphatase ZDP isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 125866974 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 125858533 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 125871012 protein ADP-ribosyltransferase PARP3-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 125843269 poly [ADP-ribose] polymerase 2 isoform X1 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 125844578 protein ADP-ribosyltransferase PARP3-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 125845344 LOW QUALITY PROTEIN: DNA repair protein RAD4 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 125847776 ubiquitin receptor RAD23d-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 125848650 ubiquitin receptor RAD23d-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 125852659 ubiquitin receptor RAD23c-like K10839 RAD23; UV excision repair protein RAD23
F 125859296 ubiquitin receptor RAD23b isoform X1 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 125857671 uncharacterized protein LOC125857671 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 125872505 uncharacterized protein LOC125872505 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 125862246 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 125848023 cullin-4-like K10609 CUL4; cullin 4
F 125846662 cullin-4-like K10609 CUL4; cullin 4
F 125846560 DNA damage-binding protein 1 isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 125870218 protein DAMAGED DNA-BINDING 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 125876783 uncharacterized protein LOC125876783 K15082 RAD7; DNA repair protein RAD7
F 125841944 uncharacterized protein LOC125841944 isoform X1 K15082 RAD7; DNA repair protein RAD7
F 125876030 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 125877059 DNA repair protein RAD16-like K15083 RAD16; DNA repair protein RAD16
F 125877060 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 125877061 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 125877229 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 125877295 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 125868429 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 125869272 DNA repair protein RAD16-like K15083 RAD16; DNA repair protein RAD16
F 125842294 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 125846665 DNA-directed RNA polymerase II subunit RPB1 isoform X1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 125848060 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 125850951 DNA-directed RNA polymerase II subunit RPB2-like K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 125866962 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 125852292 DNA-directed RNA polymerase II subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 125867163 DNA-directed RNA polymerases IV and V subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 125856582 DNA-directed RNA polymerases IV and V subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 125872961 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 125852468 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 125868168 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 125856725 DNA-directed RNA polymerase V subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 125858050 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 125846781 DNA-directed RNA polymerase V subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 125871664 DNA-directed RNA polymerases II and V subunit 6B-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 125872762 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 125847545 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 125860532 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 125869165 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 125874332 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 125843724 DNA-directed RNA polymerases II, IV and V subunit 11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 125864961 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 125857671 uncharacterized protein LOC125857671 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 125872505 uncharacterized protein LOC125872505 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 125862246 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 125848023 cullin-4-like K10609 CUL4; cullin 4
F 125846662 cullin-4-like K10609 CUL4; cullin 4
F 125846560 DNA damage-binding protein 1 isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 125862576 WD repeat-containing protein ATCSA-1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 125870276 protein CHROMATIN REMODELING 8 isoform X1 K10841 ERCC6; DNA excision repair protein ERCC-6
F 125862294 UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 125848829 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 125865392 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 125871708 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 125863946 general transcription and DNA repair factor IIH helicase subunit XPB1-like K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 125841321 general transcription and DNA repair factor IIH helicase subunit XPB1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 125874236 general transcription and DNA repair factor IIH helicase subunit XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 125864284 general transcription and DNA repair factor IIH subunit TFB1-1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 125851115 general transcription factor IIH subunit 2-like K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 125855230 general transcription factor IIH subunit 2-like K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 125872886 general transcription and DNA repair factor IIH subunit TFB4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 125846261 general transcription and DNA repair factor IIH subunit TFB2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 125875265 general transcription and DNA repair factor IIH subunit TFB5-like K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 125878431 general transcription and DNA repair factor IIH subunit TFB5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 125842440 cyclin-dependent kinase D-3-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 125853311 cyclin-H1-1-like isoform X1 K06634 CCNH; cyclin H
E 125856486 cyclin-H1-1-like K06634 CCNH; cyclin H
E 125853157 uncharacterized protein LOC125853157 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 125866824 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 125841599 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 125857754 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 125876278 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 125864597 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 125864733 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
E 125870999 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
D Other NER factors
E 125860694 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 125842038 DNA repair endonuclease UVH1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 125846758 DNA repair protein UVH3 isoform X1 K10846 ERCC5; DNA excision repair protein ERCC-5
E 125844290 DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 125858485 MMS19 nucleotide excision repair protein homolog K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 125863944 cullin-3A-like K03869 CUL3; cullin 3
E 125849401 cullin-3A-like K03869 CUL3; cullin 3
E 125849402 cullin-3A-like K03869 CUL3; cullin 3
E 125872609 uncharacterized protein LOC125872609 K03872 ELOC; elongin-C
E 125867301 uncharacterized protein LOC125867301 K03873 ELOB; elongin-B
E 125876777 uncharacterized protein LOC125876777 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 125874351 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 125858033 DNA mismatch repair protein MSH3 K08736 MSH3; DNA mismatch repair protein MSH3
E 125876627 DNA mismatch repair protein MSH7 K08737 MSH6; DNA mismatch repair protein MSH6
E 125853167 DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 125856538 DNA mismatch repair protein MLH1 isoform X1 K08734 MLH1; DNA mismatch repair protein MLH1
E 125871300 DNA mismatch repair protein PMS1 K10858 PMS2; DNA mismatch repair protein PMS2
E 125846761 DNA mismatch repair protein MLH3 isoform X1 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 125864721 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 125857440 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
E 125866002 sister chromatid cohesion protein PDS5 homolog C isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
E 125852456 uncharacterized protein LOC125852456 K03505 POLD4; DNA polymerase delta subunit 4
E 125870913 uncharacterized protein LOC125870913 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 125866824 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 125841599 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 125857754 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 125876278 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 125864597 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 125864733 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
E 125870999 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 125875888 replication factor C subunit 1 isoform X1 K10754 RFC1; replication factor C subunit 1
E 125842542 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 125844663 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 125847444 uncharacterized protein LOC125847444 K10756 RFC3_5; replication factor C subunit 3/5
E 125847490 uncharacterized protein LOC125847490 K10756 RFC3_5; replication factor C subunit 3/5
E 125875811 replication factor C subunit 3-like isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
E 125867403 replication factor C subunit 3 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
E 125872104 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 125874562 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 125848029 exonuclease 1 isoform X1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 125858109 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 125844290 DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 125846957 uncharacterized protein LOC125846957 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 125852147 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 125866612 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 125852744 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA1-core complex
E 125870301 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1
E 125842243 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 125874857 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 125862718 uncharacterized protein LOC125862718 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 125854387 uncharacterized protein LOC125854387 isoform X1 K12173 BRE; BRCA1-A complex subunit BRE
E 125874255 uncharacterized protein LOC125874255 isoform X1 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 125865960 uncharacterized protein LOC125865960 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 125877323 uncharacterized protein LOC125877323 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 125872699 BRCT domain-containing protein At4g02110-like K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 125853178 BRCT domain-containing protein At4g02110 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 125852147 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 125866612 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 125852744 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA complex
E 125871595 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 125876413 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 125876413 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 125845408 DNA repair protein RAD51 homolog 2 K10869 RAD51L1; RAD51-like protein 1
E 125867529 DNA repair protein RAD51 homolog 3 K10870 RAD51L2; RAD51-like protein 2
E 125843854 DNA repair protein RAD51 homolog 4 isoform X1 K10871 RAD51L3; RAD51-like protein 3
E 125849765 DNA repair protein XRCC2 homolog K10879 XRCC2; DNA-repair protein XRCC2
E 125875730 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 125841804 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 125844752 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 125875181 SNF2 domain-containing protein CLASSY 1-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125865186 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125853883 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125867358 protein CHROMATIN REMODELING 35 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125855212 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125856645 protein CHROMATIN REMODELING 25 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125841391 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125843132 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125843133 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125843135 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125843136 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125844648 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 125861278 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 125851078 ATP-dependent DNA helicase Q-like 1 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 125841502 ATP-dependent DNA helicase Q-like 2 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 125847786 ATP-dependent DNA helicase Q-like SIM isoform X1 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 125847708 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 125876821 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 125868330 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 125847708 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 125876821 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 125851369 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 125866832 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 125862157 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 125844549 uncharacterized protein LOC125844549 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 125866824 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 125841599 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 125857754 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 125876278 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 125864597 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 125864733 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
E 125870999 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 125875661 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 125860474 uncharacterized protein LOC125860474 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 125863217 uncharacterized protein LOC125863217 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 125869421 uncharacterized protein LOC125869421 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 125864664 uncharacterized protein LOC125864664 K19022 AP5B1; AP-5 complex subunit beta-1
E 125869605 AP-5 complex subunit mu isoform X1 K19023 AP5M1; AP-5 complex subunit mu-1
E 125865119 uncharacterized protein LOC125865119 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 125851163 structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E 125869093 structural maintenance of chromosomes protein 6B isoform X1 K22804 SMC6; structural maintenance of chromosomes protein 6
E 125853429 uncharacterized protein LOC125853429 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 125876296 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 125863261 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 125866086 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 125872838 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 125856865 crossover junction endonuclease EME1B-like K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 125853581 crossover junction endonuclease MUS81 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 125873388 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 125860921 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 125870881 structure-specific endonuclease subunit SLX1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 125872473 structure-specific endonuclease subunit slx1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 125863019 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 125858036 single-strand DNA endonuclease 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 125855205 uncharacterized protein LOC125855205 K19026 SPG11; spatacsin
E 125843251 uncharacterized protein LOC125843251 isoform X1 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 125847954 protein MRG1 K11339 MORF4L1; mortality factor 4-like protein 1
E 125857149 protein MRG1-like K11339 MORF4L1; mortality factor 4-like protein 1
E 125847812 uncharacterized protein LOC125847812 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 125867593 uncharacterized protein LOC125867593 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 125849017 ATPase family AAA domain-containing protein FIGL1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 125845525 uncharacterized protein LOC125845525 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 125870640 Werner Syndrome-like exonuclease K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 125863234 DNA-dependent metalloprotease WSS1-like K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 125857802 DNA-dependent metalloprotease WSS1-like isoform X1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 125868298 single-stranded DNA-binding protein WHY1, chloroplastic K26559 WHY1; single-stranded DNA-binding protein WHY1
E 125845414 single-stranded DNA-binding protein WHY2, mitochondrial isoform X1 K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 125852923 ATP-dependent DNA helicase 2 subunit KU70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 125844188 ATP-dependent DNA helicase 2 subunit KU80 isoform X1 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 125852147 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 125866612 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 125877803 DNA ligase 4 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 125875183 DNA repair protein XRCC4-like K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 125866974 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 125871177 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 125847614 uncharacterized protein LOC125847614 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
C FA (Fanconi anemia) pathway
D FA core complex
E 125859849 uncharacterized protein LOC125859849 K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 125844614 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 125876124 protein MHF1 homolog K11511 APITD1; centromere protein S
E 125860881 protein MHF2 homolog K15360 STRA13; centromere protein X
E 125877717 uncharacterized protein LOC125877717 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 125847708 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 125876821 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 125851369 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 125866832 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 125862157 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 125844549 uncharacterized protein LOC125844549 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 125853255 uncharacterized protein LOC125853255 isoform X1 K10891 FANCD2; fanconi anemia group D2 protein
E 125853777 uncharacterized protein LOC125853777 isoform X1 K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 125871595 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 125865960 uncharacterized protein LOC125865960 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 125852909 fanconi-associated nuclease 1 homolog isoform X1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 125876413 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 125867529 DNA repair protein RAD51 homolog 3 K10870 RAD51L2; RAD51-like protein 2
E 125864891 uncharacterized protein LOC125864891 isoform X1 K11137 TELO2; telomere length regulation protein
E 125863803 uncharacterized protein LOC125863803 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 125875162 phytochrome-associated serine/threonine-protein phosphatase 3 K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 125859636 phytochrome-associated serine/threonine-protein phosphatase 3-like K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 125843660 uncharacterized protein LOC125843660 isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 125874497 uncharacterized protein LOC125874497 isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 125846250 uncharacterized protein LOC125846250 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 125847410 uncharacterized protein LOC125847410 K23314 WRAP53; telomerase Cajal body protein 1
E 125872929 uncharacterized protein LOC125872929 K24752 WDR70; WD repeat-containing protein 70
E 125846957 uncharacterized protein LOC125846957 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 125868984 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 125841214 DNA polymerase kappa isoform X1 K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 125861316 DNA repair protein REV1 isoform X1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 125853734 DNA polymerase zeta catalytic subunit K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 125848016 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 125848950 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 125858206 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 125872226 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 125860072 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 125843544 DNA repair protein RAD5A isoform X1 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 125859588 DNA repair protein RAD5B-like K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 125862443 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 125865468 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 125865909 ubiquitin-conjugating enzyme E2 variant 1D-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 125857221 ubiquitin-conjugating enzyme E2 variant 1B K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 125876915 ubiquitin-conjugating enzyme E2 36-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 125865649 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 125874562 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 125865065 uncharacterized protein LOC125865065 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 125858250 uncharacterized protein LOC125858250 K10903 HUS1; HUS1 checkpoint protein
D 125843049 uncharacterized protein LOC125843049 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 125849500 cell cycle checkpoint protein RAD17 isoform X1 K06662 HRAD17; cell cycle checkpoint protein
D 125842542 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 125844663 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 125847444 uncharacterized protein LOC125847444 K10756 RFC3_5; replication factor C subunit 3/5
D 125847490 uncharacterized protein LOC125847490 K10756 RFC3_5; replication factor C subunit 3/5
D 125875811 replication factor C subunit 3-like isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
D 125867403 replication factor C subunit 3 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
D 125872104 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 125843049 uncharacterized protein LOC125843049 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 125860275 uncharacterized protein LOC125860275 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 125855290 chromosome segregation in meiosis protein 3 K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 125864891 uncharacterized protein LOC125864891 isoform X1 K11137 TELO2; telomere length regulation protein
D 125861866 uncharacterized protein LOC125861866 K20403 TTI1; TELO2-interacting protein 1
D 125874696 uncharacterized protein At2g39910 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 125862631 protein GET4-like K23387 GET4; golgi to ER traffic protein 4
D 125878202 protein GET4-like K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 125872967 serine/threonine-protein kinase ATR K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 125857461 serine/threonine-protein kinase ATM isoform X1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 125847526 14-3-3 protein 4 K06630 YWHAE; 14-3-3 protein epsilon
D 125862683 14-3-3 protein 2 K06630 YWHAE; 14-3-3 protein epsilon
D 125875340 14-3-3 protein 7-like K06630 YWHAE; 14-3-3 protein epsilon
D 125875855 14-3-3 protein 9 isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 125851043 14-3-3-like protein C K06630 YWHAE; 14-3-3 protein epsilon
D 125851059 14-3-3 protein 7 K06630 YWHAE; 14-3-3 protein epsilon
D 125867800 14-3-3 protein 8 isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 125854528 14-3-3 protein 10 K06630 YWHAE; 14-3-3 protein epsilon
D 125868227 LOW QUALITY PROTEIN: 14-3-3-like protein GF14 iota K06630 YWHAE; 14-3-3 protein epsilon
D 125856927 14-3-3 protein 5 K06630 YWHAE; 14-3-3 protein epsilon
D 125843808 14-3-3 protein 1 K06630 YWHAE; 14-3-3 protein epsilon
D 125859403 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 125845213 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 125870806 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 125848764 uncharacterized protein LOC125848764 isoform X1 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 125865007 serine/threonine-protein kinase Nek5-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125865639 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125851352 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125866054 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125858376 serine/threonine-protein kinase Nek6-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125871728 serine/threonine-protein kinase Nek2-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125843645 LOW QUALITY PROTEIN: serine/threonine-protein kinase Nek6 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125844185 serine/threonine-protein kinase Nek5-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 125849950 uncharacterized protein LOC125849950 K22422 DONSON; protein downstream neighbor of Son
D 125843855 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 125844102 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 125850432 uncharacterized protein LOC125850432 isoform X1 K25059 SDE2; replication stress response regulator SDE2
D 125845306 protein DECREASED SIZE EXCLUSION LIMIT 1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 125841203 helicase and polymerase-containing protein TEBICHI K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 125847305 rDNA transcriptional regulator pol5 K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 125863227 uncharacterized protein LOC125863227 isoform X1 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 125847524 DNA cross-link repair protein SNM1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 125842493 uncharacterized protein LOC125842493 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 125844999 uncharacterized protein LOC125844999 isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 125877959 uncharacterized protein LOC125877959 K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 125845495 exonuclease V, chloroplastic-like K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 125862477 uncharacterized protein LOC125862477 isoform X1 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 125858492 uncharacterized protein LOC125858492 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 125848384 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 125848385 endonuclease 4-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 125866893 endonuclease 2 isoform X1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 125878004 switch 2 isoform X1 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 125862976 pre-mRNA-processing factor 19 homolog 2-like isoform X1 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 125851234 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 125854356 cell division cycle 5-like protein isoform X1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 125858107 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 125870056 protein pleiotropic regulatory locus 1-like K12862 PLRG1; pleiotropic regulator 1
D 125870064 protein pleiotropic regulatory locus 1-like K12862 PLRG1; pleiotropic regulator 1
D 125872345 protein pleiotropic regulatory locus 1-like K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 125868181 nudix hydrolase 1 isoform X1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 125859652 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 125853386 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125855283 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125874086 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125855009 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 125855430 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 125848587 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 125869939 ribonucleoside-diphosphate reductase small chain A K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 125878418 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 125846724 uracil-DNA glycosylase, mitochondrial isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 125848879 alkylbase DNA glycosidase-like protein mag2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 125856340 alkylbase DNA glycosidase-like protein mag2 isoform X1 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 125865918 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 125871914 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 125847653 uncharacterized protein LOC125847653 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 125864995 uncharacterized protein LOC125864995 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 125852261 uncharacterized protein LOC125852261 isoform X1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 125867439 uncharacterized protein LOC125867439 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 125854800 uncharacterized protein LOC125854800 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 125856440 uncharacterized protein LOC125856440 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 125860014 uncharacterized protein LOC125860014 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 125858248 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 125870681 endonuclease III homolog 1, chloroplastic-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 125872542 endonuclease III homolog 1, chloroplastic K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 125860859 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 125856745 DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 125875779 DNA polymerase I B, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 125875779 DNA polymerase I B, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 125851800 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F 39717203 rpoB; RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F 125877432 LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit beta''-like K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 39717201 rpoC2; RpoC2 K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 39717202 rpoC1; RpoC1 K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 125852327 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 125873670 DNA-directed RNA polymerase subunit beta''-like K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 39717258 rpoA; RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 125846255 uncharacterized protein LOC125846255 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 125861851 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 125877180 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 125868125 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 125877180 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 125868125 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
E 125860093 uncharacterized protein LOC125860093 K04485 radA; DNA repair protein RadA/Sms
E 125867212 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 125867838 DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1 K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 125863125 DNA gyrase subunit B, chloroplastic/mitochondrial isoform X1 K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 125870435 uncharacterized protein LOC125870435 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 125877180 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D 125868125 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
D 125861851 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 125868181 nudix hydrolase 1 isoform X1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 125859652 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 125853386 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125855283 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 125874086 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024