+D GENES KO
#
KEGG Orthology (KO) - Serratia symbiotica
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ssz00010]
D SCc_014 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SCc_678 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCc_186 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCc_676 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SCc_448 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SCc_185 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SCc_296 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCc_150 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCc_388 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SCc_574 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SCc_573 aceF; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SCc_572 lpdA; pyruvate and 2-oxoglutarate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCc_253 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCc_442 ptsG; fused glucose-specific PTS enzymes: IIBcomponent, IIC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:ssz00020]
D SCc_572 lpdA; pyruvate and 2-oxoglutarate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCc_251 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SCc_252 sucC; succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SCc_574 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SCc_573 aceF; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ssz00030]
D SCc_014 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SCc_354 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SCc_297 pgl; 6-phosphogluconolactonase, cycloisomerase 2 family K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D SCc_529 gnd; gluconate-6-phosphate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SCc_636 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SCc_184 tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SCc_108 talA; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SCc_187 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SCc_283 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SCc_253 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCc_419 prsA; phosphoribosylpyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SCc_186 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCc_678 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ssz00040]
D SCc_335 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SCc_334 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCc_636 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:ssz00051]
D SCc_678 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCc_621 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SCc_186 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCc_676 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SCc_622 fruA; fused fructose-specific PTS enzymes K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:ssz00052]
D SCc_334 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCc_253 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCc_678 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:ssz00053]
D SCc_335 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SCc_336 wbnF; NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:ssz00500]
D SCc_334 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCc_253 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCc_014 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ssz00520]
D SCc_268 nagE; used N-acetyl glucosamine specific PTS enzymes: IIC component, IIB component, IIA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SCc_010 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SCc_060 mrsA; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SCc_009 glmU; UDP-N-acetylglucosamine pyrophosphorylase (N-acetylglucosamine-1-phosphate uridyltransferase) K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SCc_603 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SCc_736 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SCc_442 ptsG; fused glucose-specific PTS enzymes: IIBcomponent, IIC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCc_253 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCc_334 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCc_335 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SCc_336 wbnF; NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SCc_014 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:ssz00620]
D SCc_574 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SCc_573 aceF; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SCc_572 lpdA; pyruvate and 2-oxoglutarate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCc_499 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SCc_500 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SCc_388 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SCc_220 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SCc_738 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SCc_737 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SCc_493 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SCc_232 gloB; putative hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ssz00630]
D SCc_568 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SCc_572 lpdA; pyruvate and 2-oxoglutarate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:ssz00640]
D SCc_499 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SCc_500 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SCc_572 lpdA; pyruvate and 2-oxoglutarate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCc_220 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SCc_738 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SCc_737 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SCc_493 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SCc_252 sucC; succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SCc_251 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism
D SCc_447 fadH; trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
C 00660 C5-Branched dibasic acid metabolism
D SCc_252 sucC; succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SCc_251 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:ssz00562]
D SCc_567 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SCc_676 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ssz00190]
D SCc_445 ndh; FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SCc_475 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SCc_476 cyoD; cytochrome o ubiquinol oxidase operon protein K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D SCc_477 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D SCc_478 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D SCc_479 cyoA; cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D SCc_005 atpA; ATP synthase a chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SCc_007 atpD; ATP synthase b chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SCc_006 atpG; ATP synthase g chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SCc_004 atpH; ATP synthase d chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SCc_008 atpC; ATP synthase e chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SCc_001 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SCc_003 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SCc_002 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SCc_068 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D SCc_300 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ssz00710]
D SCc_185 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SCc_448 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SCc_186 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCc_184 tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SCc_187 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SCc_676 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SCc_636 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SCc_108 talA; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
C 00720 Other carbon fixation pathways [PATH:ssz00720]
D SCc_251 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SCc_252 sucC; succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SCc_220 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SCc_738 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SCc_737 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SCc_493 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SCc_329 folD; 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SCc_500 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SCc_499 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:ssz00680]
D SCc_568 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SCc_150 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCc_186 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCc_678 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCc_499 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SCc_500 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SCc_296 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCc_516 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism
C 00920 Sulfur metabolism [PATH:ssz00920]
D SCc_677 sbp; sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SCc_308 cysU; sulfate transport ABC transporter protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D SCc_309 cysW; sulfate transport system permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D SCc_310 cysA; sulfate transport system ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SCc_159 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SCc_158 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SCc_160 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D SCc_094 cysQ; CysQ/AmtA K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SCc_156 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D SCc_154 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D SCc_155 cysI; sulfite reductase (NADPH) hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D SCc_037 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SCc_313 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ssz00061]
D SCc_220 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SCc_738 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SCc_737 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SCc_493 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SCc_436 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D SCc_434 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SCc_433 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SCc_616 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SCc_437 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SCc_435 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCc_503 fabA; beta-hydroxydecanoyl thioester dehydrase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D SCc_216 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SCc_447 fadH; trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:ssz00074]
D SCc_250 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SCc_436 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D SCc_434 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ssz00561]
D SCc_015 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SCc_432 plsX; putative fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SCc_587 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:ssz00564]
D SCc_038 gpsA; glycerol-3-phosphate dehydrogenase (NAD+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SCc_015 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SCc_587 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SCc_211 cdsA; CDP-diglyceride synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SCc_225 pssA; phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SCc_078 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D SCc_457 pgsA; phosphatidylglycerophosphate synthetase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SCc_472 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D SCc_338 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ssz00230]
D SCc_600 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SCc_283 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SCc_253 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCc_419 prsA; phosphoribosylpyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SCc_497 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SCc_718 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SCc_302 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SCc_570 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D SCc_303 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SCc_406 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SCc_284 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SCc_272 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SCc_556 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SCc_564 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SCc_555 guaA; GMP synthase (glutamine-hydrolysing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SCc_762 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SCc_461 nrdA; ribonucleoside-diphosphate reductase (major subunit) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SCc_462 nrdB; ribonucleoside-diphosphate reductase (minor subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SCc_299 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D SCc_087 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SCc_364 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SCc_119 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D SCc_160 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D SCc_159 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SCc_158 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:ssz00240]
D SCc_117 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SCc_116 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SCc_770 pyrB; aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SCc_428 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SCc_504 pyrD; dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D SCc_027 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SCc_711 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SCc_207 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SCc_564 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SCc_149 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SCc_514 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SCc_536 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D SCc_461 nrdA; ribonucleoside-diphosphate reductase (major subunit) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SCc_462 nrdB; ribonucleoside-diphosphate reductase (minor subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SCc_439 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SCc_028 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SCc_196 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ssz00250]
D SCc_449 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SCc_087 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SCc_406 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SCc_770 pyrB; aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SCc_117 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SCc_116 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SCc_010 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SCc_497 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ssz00260]
D SCc_627 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SCc_568 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SCc_296 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCc_516 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SCc_572 lpdA; pyruvate and 2-oxoglutarate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCc_225 pssA; phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SCc_380 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SCc_379 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ssz00270]
D SCc_037 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SCc_313 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SCc_278 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SCc_627 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SCc_171 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SCc_016 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SCc_516 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ssz00280]
D SCc_572 lpdA; pyruvate and 2-oxoglutarate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:ssz00300]
D SCc_627 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SCc_305 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SCc_115 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SCc_203 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D SCc_332 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SCc_682 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SCc_132 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SCc_133 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D SCc_572 lpdA; pyruvate and 2-oxoglutarate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis
D SCc_117 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SCc_116 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
C 00330 Arginine and proline metabolism
D SCc_301 speG; diamine N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D SCc_572 lpdA; pyruvate and 2-oxoglutarate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ssz00400]
D SCc_638 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SCc_515 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SCc_617 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SCc_377 trpD; anthranilate synthase component II K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D SCc_378 trpC; indole-3-glycerol phosphate synthase (IGPS) / N-(5'-phospho-ribosyl)anthranilate isomerase (PRAI) K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D SCc_380 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SCc_379 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:ssz00430]
D SCc_500 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SCc_499 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:ssz00450]
D SCc_391 sufS; cysteine desulfurase / selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SCc_520 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SCc_159 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SCc_158 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SCc_537 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ssz00460]
D SCc_449 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SCc_568 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ssz00470]
D SCc_139 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SCc_768 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SCc_135 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SCc_682 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
C 00480 Glutathione metabolism [PATH:ssz00480]
D SCc_171 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SCc_016 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SCc_750 yrbA; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SCc_529 gnd; gluconate-6-phosphate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SCc_354 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:ssz00540]
D SCc_217 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SCc_143 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D SCc_215 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D SCc_331 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D SCc_218 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D SCc_510 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D SCc_610 kdsD; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SCc_414 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SCc_508 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SCc_035 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D SCc_322 lpxL; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SCc_228 lpcA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D SCc_595 rfaE; biproductal, ADP-L-glycero-D-manno-heptose synthase, N-terminal putative kinase and C-terminal putative sugar nucleotide transferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D SCc_224 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D SCc_043 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D SCc_045 rfaC; ADP-heptose:LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D SCc_044 rfaF; ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D SCc_101 rfaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ssz00541]
D SCc_334 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCc_335 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SCc_336 wbnF; NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SCc_009 glmU; UDP-N-acetylglucosamine pyrophosphorylase (N-acetylglucosamine-1-phosphate uridyltransferase) K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:ssz00550]
D SCc_603 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SCc_736 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SCc_138 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SCc_135 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SCc_132 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SCc_139 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SCc_133 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SCc_210 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SCc_527 bacA; undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SCc_134 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SCc_137 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SCc_634 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SCc_256 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SCc_131 ftsI; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:ssz00552]
D SCc_527 bacA; undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ssz00543]
D SCc_037 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ssz00730]
D SCc_720 thiC; thiamine biosynthesis K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D SCc_565 iscS; cysteine desulfurase-NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCc_473 dxs; 1-deoxyxylulose-5-phosphate synthase, flavoprotein K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SCc_471 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D SCc_444 thiK; thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D SCc_364 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ssz00740]
D SCc_372 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SCc_468 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SCc_685 yigB; FMN phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D SCc_596 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D SCc_469 ribH; riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D SCc_385 ribE; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D SCc_111 ribF; riboflavin kinase, FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SCc_011 fre; aquacobalamin reductase / NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D SCc_600 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:ssz00750]
D SCc_340 pdxY; pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SCc_491 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D SCc_516 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SCc_122 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D SCc_249 pdxJ; pyridoxine 5-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ssz00760]
D SCc_284 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SCc_287 nadR; nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SCc_257 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SCc_569 nadE; NH3-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D SCc_166 ygaD; competence damage-inducible protein A K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D SCc_241 ppnK; tmRNA K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:ssz00770]
D SCc_734 coaA; type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D SCc_033 coaD; 4'-phospho-pantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SCc_146 coaE; dephosphocoenzyme A kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SCc_250 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism [PATH:ssz00780]
D SCc_616 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SCc_437 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SCc_435 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCc_216 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SCc_554 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SCc_552 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D SCc_553 bioB; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D SCc_735 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ssz00785]
D SCc_230 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D SCc_229 lipA; lipoic acid synthetase (FeS enzyme) K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D SCc_572 lpdA; pyruvate and 2-oxoglutarate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCc_574 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SCc_573 aceF; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:ssz00790]
D SCc_538 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D SCc_275 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SCc_061 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SCc_118 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SCc_494 folC; dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SCc_372 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SCc_153 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SCc_152 hypothetical protein, radical SAM superfamily K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SCc_588 yqcD; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:ssz00670]
D SCc_118 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SCc_329 folD; 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SCc_568 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SCc_302 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SCc_071 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SCc_196 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ssz00860]
D SCc_317 gltX; glutamyl-tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SCc_681 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D SCc_680 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D SCc_719 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D SCc_333 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D SCc_013 hemG; protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D SCc_363 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D SCc_157 cysG; uroporphyrin-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D SCc_475 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ssz00900]
D SCc_473 dxs; 1-deoxyxylulose-5-phosphate synthase, flavoprotein K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SCc_209 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D SCc_162 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D SCc_418 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SCc_163 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D SCc_561 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D SCc_114 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D SCc_474 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SCc_210 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SCc_184 tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:ssz00261]
D SCc_159 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SCc_158 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SCc_627 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SCc_305 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SCc_115 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ssz00521]
D SCc_253 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCc_567 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D SCc_434 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SCc_435 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SCc_436 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D SCc_278 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ssz03020]
D SCc_722 rpoB; RNA polymerase, b subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SCc_721 rpoC; RNA polymerase, b' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SCc_674 rpoA; RNA polymerase, a subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ssz03010]
D SCc_513 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SCc_205 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SCc_655 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SCc_673 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SCc_666 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SCc_090 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SCc_645 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SCc_663 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SCc_584 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SCc_648 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SCc_672 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SCc_644 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SCc_671 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SCc_662 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SCc_051 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SCc_173 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SCc_658 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SCc_092 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SCc_653 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SCc_592 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SCc_725 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SCc_652 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SCc_649 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SCc_650 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SCc_661 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SCc_664 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SCc_723 rplL; 50S ribosomal protein L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SCc_093 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SCc_724 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SCc_726 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SCc_585 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SCc_659 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SCc_668 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SCc_656 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SCc_675 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SCc_665 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SCc_176 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SCc_401 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SCc_067 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SCc_654 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SCc_651 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SCc_660 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SCc_619 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D SCc_066 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SCc_030 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SCc_657 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SCc_667 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SCc_746 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SCc_431 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SCc_031 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SCc_757 rnpA; protein component of ribonuclease P K02914 RP-L34; large subunit ribosomal protein L34
D SCc_402 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SCc_670 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SCc_181 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCc_771 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCc_182 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ssz00970]
D SCc_318 trnA1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SCc_716 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SCc_328 trnR2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCc_320 trnR3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCc_170 trnR1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCc_697 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCc_489 trnN; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SCc_183 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SCc_326 pseudogene K14222 tRNA-Cys; tRNA Cys
D SCc_266 trnQ1; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SCc_267 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SCc_456 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCc_731 trnG1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCc_696 trnH; tRNA-His K14226 tRNA-His; tRNA His
D SCc_717 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SCc_058 tRNAL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCc_265 trnL3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCc_327 trnL2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCc_695 trnL1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCc_753 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCc_294 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SCc_057 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D SCc_200 trnM1; tRNA-Met K14230 tRNA-Met; tRNA Met
D SCc_264 trnM2; tRNA-Met K14230 tRNA-Met; tRNA Met
D SCc_323 trnI1; tRNA-Ile K14230 tRNA-Met; tRNA Met
D SCc_099 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SCc_694 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SCc_169 trnS2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCc_446 trnS1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCc_459 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCc_733 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCc_730 trnT1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCc_715 tRrnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SCc_732 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SCc_316 trnV1; tRNA-Val K14237 tRNA-Val; tRNA Val
D SCc_387 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D SCc_317 gltX; glutamyl-tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SCc_269 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SCc_167 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SCc_351 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SCc_306 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SCc_024 glyQ; glycyl-tRNA synthetase a subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SCc_023 glyS; glycyl-tRNA synthetase, b subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SCc_404 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SCc_517 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SCc_330 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SCc_537 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SCc_071 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SCc_748 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SCc_260 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SCc_112 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SCc_192 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SCc_451 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SCc_223 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SCc_560 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SCc_400 pheS; phenylalanyl-tRNA synthetase, a subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SCc_399 pheT; phenylalanyl-tRNA synthetase, b subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SCc_339 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SCc_635 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ssz03060]
D SCc_669 membrane-embebed preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY
D SCc_728 preprotein translocase IISP family, membrane subunit K03073 secE; preprotein translocase subunit SecE
D SCc_059 preprotein translocase IISP family, auxillary membrane component K03075 secG; preprotein translocase subunit SecG
D SCc_466 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D SCc_467 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SCc_465 yajC; SecYEG protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D SCc_760 yidC; preprotein translocase, membrane component K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCc_145 preprotein translocase subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCc_039 protein-export protein K03071 secB; preprotein translocase subunit SecB
D SCc_172 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SCc_422 ffs; signal recognition particle RNA K01983 ffs; SRP RNA
D SCc_689 ftsY; Cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor
D SCc_246 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SCc_113 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ssz04122]
D SCc_565 iscS; cysteine desulfurase-NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCc_688 sirA; tRNA 2-thiouridine synthesizing protein A K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D SCc_643 yheL; sulfur transfer protein complex, TusB subunit K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D SCc_642 yheM; sulfur transfer protein complex, TusC subunit K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D SCc_641 yheN; sulfur transfer protein complex, TusD subunit K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D SCc_319 yccK; putative membrane protein, putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D SCc_408 trmU; tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ssz03018]
D SCc_194 nudH; (di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SCc_429 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SCc_150 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCc_050 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SCc_088 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SCc_049 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SCc_705 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D SCc_678 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCc_109 dnaK; chaperone Hsp70 K04043 dnaK; molecular chaperone DnaK
D SCc_097 groEL; chaperone Hsp60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SCc_084 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SCc_300 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SCc_276 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ssz03030]
D SCc_237 dnaQ; DNA polymerase III, e subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SCc_219 dnaE; DNA polymerase III, a subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SCc_366 dnaX; DNA polymerase III, g and t subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SCc_440 holB; DNA polymerase III, d' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SCc_258 holA; DNA polymerase III, d subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SCc_281 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SCc_749 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SCc_755 dnaN; DNA polymerase III, b subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCc_708 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SCc_591 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SCc_710 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCc_236 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SCc_766 polA; 5'-3' exonuclease domain of DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SCc_315 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ssz03410]
D SCc_341 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SCc_243 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SCc_032 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SCc_623 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SCc_766 polA; 5'-3' exonuclease domain of DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SCc_315 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ssz03420]
D SCc_413 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SCc_709 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SCc_551 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SCc_458 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SCc_686 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SCc_766 polA; 5'-3' exonuclease domain of DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SCc_315 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ssz03430]
D SCc_686 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SCc_488 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D SCc_710 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCc_219 dnaE; DNA polymerase III, a subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SCc_755 dnaN; DNA polymerase III, b subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCc_366 dnaX; DNA polymerase III, g and t subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SCc_258 holA; DNA polymerase III, d subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SCc_440 holB; DNA polymerase III, d' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SCc_237 dnaQ; DNA polymerase III, e subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SCc_749 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SCc_281 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SCc_315 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ssz03440]
D SCc_710 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCc_766 polA; 5'-3' exonuclease domain of DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SCc_198 exodeoxyribonuclease V, b chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D SCc_197 exodeoxyribonuclease V, g chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D SCc_199 exodeoxyribonuclease V, a chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SCc_219 dnaE; DNA polymerase III, a subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SCc_755 dnaN; DNA polymerase III, b subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCc_366 dnaX; DNA polymerase III, g and t subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SCc_258 holA; DNA polymerase III, d subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SCc_440 holB; DNA polymerase III, d' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SCc_237 dnaQ; DNA polymerase III, e subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SCc_749 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SCc_281 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SCc_745 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SCc_091 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ssz02010]
D SCc_677 sbp; sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SCc_308 cysU; sulfate transport ABC transporter protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D SCc_309 cysW; sulfate transport system permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D SCc_310 cysA; sulfate transport system ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SCc_128 tbpA; thiamine transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D SCc_127 thiP; thiamine transporter membrane protein K02063 thiP; thiamine transport system permease protein
D SCc_126 thiQ; thiamine transporter ATP-binding subunit K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D SCc_606 mlaC; toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D SCc_607 mlaD; putative ABC transport system substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SCc_608 mlaE; integral membrane component of the phospholipid ABC transporte K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SCc_605 mlaB; anti-sigma-factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D SCc_609 mlaF; putative ABC transporter ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SCc_543 glnH; glutamine transport system substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D SCc_544 glnP; glutamine ABC transporter permease protein K10037 glnP; glutamine transport system permease protein
D SCc_545 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SCc_410 lolE; Lipoprotein releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D SCc_412 lolC; Lipoprotein releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D SCc_411 lolD; Lipoprotein releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SCc_751 lptF; lipopolysaccharide export system permease protein K07091 lptF; lipopolysaccharide export system permease protein
D SCc_752 lptG; lipopolysaccharide export system permease protein K11720 lptG; lipopolysaccharide export system permease protein
D SCc_613 lptB; putative ABC transporter ATP-binding protein lipopolysaccharide K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SCc_511 msbA; lipid transporter ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS) [PATH:ssz02060]
D SCc_311 ptsI; phosphotransferase system (PTS) enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SCc_312 ptsH; histidine-containing phosphocarrier protein of the phosphotransferase system (PTS) K02784 ptsH; phosphocarrier protein HPr
D SCc_442 ptsG; fused glucose-specific PTS enzymes: IIBcomponent, IIC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCc_268 nagE; used N-acetyl glucosamine specific PTS enzymes: IIC component, IIB component, IIA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SCc_620 fruB; fused fructose-specific PTS enzymes K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D SCc_622 fruA; fused fructose-specific PTS enzymes K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCc_621 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SCc_614 ptsN; PTS system, nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:ssz03070]
D SCc_599 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
D SCc_466 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D SCc_467 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SCc_728 preprotein translocase IISP family, membrane subunit K03073 secE; preprotein translocase subunit SecE
D SCc_059 preprotein translocase IISP family, auxillary membrane component K03075 secG; preprotein translocase subunit SecG
D SCc_669 membrane-embebed preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY
D SCc_465 yajC; SecYEG protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D SCc_760 yidC; preprotein translocase, membrane component K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCc_145 preprotein translocase subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCc_689 ftsY; Cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor
D SCc_039 protein-export protein K03071 secB; preprotein translocase subunit SecB
D SCc_172 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ssz02020]
D SCc_104 pagO; putative inner membrane protein K07790 pagO; putative membrane protein PagO
D SCc_631 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D SCc_506 ompN; porin K09476 ompF; outer membrane pore protein F
D SCc_148 htrA; periplasmic serine protease Do, heat shock protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SCc_756 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D SCc_168 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D SCc_540 fimD; fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D SCc_599 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ssz02024]
D SCc_084 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SCc_372 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SCc_468 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SCc_760 yidC; preprotein translocase, membrane component K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCc_728 preprotein translocase IISP family, membrane subunit K03073 secE; preprotein translocase subunit SecE
D SCc_059 preprotein translocase IISP family, auxillary membrane component K03075 secG; preprotein translocase subunit SecG
D SCc_669 membrane-embebed preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY
D SCc_465 yajC; SecYEG protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D SCc_145 preprotein translocase subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCc_689 ftsY; Cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor
D SCc_039 protein-export protein K03071 secB; preprotein translocase subunit SecB
D SCc_172 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D SCc_590 rpoD; RNA polymerase major s factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SCc_150 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ssz01501]
D SCc_506 ompN; porin K09476 ompF; outer membrane pore protein F
D SCc_599 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
D SCc_634 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SCc_256 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SCc_131 ftsI; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ssz01502]
D SCc_139 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SCc_133 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SCc_134 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SCc_137 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ssz01503]
D SCc_082 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SCc_148 htrA; periplasmic serine protease Do, heat shock protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SCc_767 dsbA; periplasmic protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SCc_599 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
D SCc_217 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ssz01000]
C 01001 Protein kinases [BR:ssz01001]
D SCc_547 Serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
C 01009 Protein phosphatases and associated proteins [BR:ssz01009]
D SCc_678 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCc_365 htpG; chaperone Hsp90, heat shock protein K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:ssz01002]
D SCc_113 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SCc_555 guaA; GMP synthase (glutamine-hydrolysing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SCc_497 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SCc_010 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SCc_714 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D SCc_750 yrbA; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SCc_332 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SCc_353 yebA; putative peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D SCc_204 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SCc_189 pepP; X-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SCc_062 hflB; ATP-dependent protease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SCc_409 htpX; heat shock protein, peptidase family M48 K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SCc_212 rseP; protease that resides in the inner membrane K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SCc_148 htrA; periplasmic serine protease Do, heat shock protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SCc_482 clpP; proteolytic subunit of clpA-clpP ATP-dependent serine protease, heat shock protein F21.5 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SCc_484 lon; DNA-binding ATP-dependent protease La, heat shock K-protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D SCc_502 ycbZ; Lon-like ATP-dependent protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D SCc_246 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SCc_450 sppA; protease IV, a signal peptide peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D SCc_375 sohB; putative peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-]
D SCc_086 hflC; FtsH protease regulator HflC K04087 hflC; modulator of FtsH protease HflC
D SCc_085 hflK; modulator for HflB protease specific for phage lambda cII repressor K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:ssz01003]
D SCc_634 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ssz01005]
D SCc_217 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SCc_218 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D SCc_143 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D SCc_215 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D SCc_331 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D SCc_510 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D SCc_322 lpxL; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SCc_035 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D SCc_414 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SCc_508 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SCc_610 kdsD; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SCc_045 rfaC; ADP-heptose:LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D SCc_034 hdtX; (heptosyl)LPS beta-1,4-glucosyltransferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D SCc_044 rfaF; ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D SCc_101 rfaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D SCc_228 lpcA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D SCc_224 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D SCc_595 rfaE; biproductal, ADP-L-glycero-D-manno-heptose synthase, N-terminal putative kinase and C-terminal putative sugar nucleotide transferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D SCc_043 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ssz01011]
D SCc_603 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SCc_736 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SCc_138 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SCc_135 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SCc_132 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SCc_139 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SCc_768 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SCc_134 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SCc_137 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SCc_527 bacA; undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SCc_452 mviN; virulence factor mviN-like protein, membrane protein, maybe involved in polysaccharydes biosynthesis K03980 murJ; putative peptidoglycan lipid II flippase
D SCc_634 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SCc_256 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SCc_131 ftsI; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SCc_353 yebA; putative peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D SCc_201 mltA; membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D SCc_234 mltD; membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D SCc_405 mltE; membrane-bound lytic murein transglycosylase E K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D SCc_438 yceG; aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D SCc_082 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SCc_389 lpp; murein lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:ssz01004]
D SCc_434 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SCc_433 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SCc_616 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SCc_437 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SCc_435 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCc_503 fabA; beta-hydroxydecanoyl thioester dehydrase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D SCc_216 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SCc_447 fadH; trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D SCc_015 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SCc_432 plsX; putative fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SCc_587 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:ssz01006]
D SCc_474 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SCc_210 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SCc_083 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SCc_475 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ssz01007]
D SCc_317 gltX; glutamyl-tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SCc_269 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SCc_339 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SCc_635 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SCc_330 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SCc_451 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SCc_537 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SCc_112 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SCc_748 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SCc_260 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SCc_192 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SCc_351 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SCc_306 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SCc_560 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SCc_024 glyQ; glycyl-tRNA synthetase a subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SCc_023 glyS; glycyl-tRNA synthetase, b subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SCc_517 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SCc_223 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SCc_404 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SCc_167 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SCc_400 pheS; phenylalanyl-tRNA synthetase, a subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SCc_399 pheT; phenylalanyl-tRNA synthetase, b subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SCc_554 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SCc_516 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ssz00194]
D SCc_008 atpC; ATP synthase e chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SCc_007 atpD; ATP synthase b chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SCc_006 atpG; ATP synthase g chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SCc_005 atpA; ATP synthase a chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SCc_004 atpH; ATP synthase d chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SCc_003 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SCc_002 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SCc_001 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ssz03000]
D SCc_373 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D SCc_270 fur; DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SCc_735 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SCc_589 fis; DNA-bending protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SCc_287 nadR; nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SCc_480 bolA; transcriptional activator of morphogenic pathway K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D SCc_017 hypothetical protein K07735 algH; putative transcriptional regulator
D SCc_277 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:ssz03021]
D SCc_674 rpoA; RNA polymerase, a subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SCc_722 rpoB; RNA polymerase, b subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SCc_721 rpoC; RNA polymerase, b' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SCc_590 rpoD; RNA polymerase major s factor K03086 rpoD; RNA polymerase primary sigma factor
D SCc_690 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D SCc_055 nusA; transcription pausing L factor K02600 nusA; transcription termination/antitermination protein NusA
D SCc_470 nusB; transcription termination, L factor K03625 nusB; transcription antitermination protein NusB
D SCc_727 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D SCc_455 RseC protein involved in reduction of the SoxR iron-sulfur cluster K03803 rseC; sigma-E factor negative regulatory protein RseC
D SCc_277 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D SCc_064 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
D SCc_705 rho; transcription termination factor K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ssz03019]
D SCc_429 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SCc_247 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SCc_088 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SCc_080 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D SCc_049 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SCc_150 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCc_050 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SCc_705 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D SCc_678 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCc_109 dnaK; chaperone Hsp70 K04043 dnaK; molecular chaperone DnaK
D SCc_097 groEL; chaperone Hsp60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SCc_084 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SCc_300 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SCc_276 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D SCc_194 nudH; (di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SCc_168 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D SCc_615 yhbJ; putative P-loop containing ATPase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:ssz03011]
D SCc_513 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SCc_205 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SCc_655 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SCc_673 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SCc_666 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SCc_090 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SCc_645 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SCc_663 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SCc_584 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SCc_648 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SCc_672 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SCc_644 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SCc_671 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SCc_662 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SCc_051 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SCc_173 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SCc_658 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SCc_092 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SCc_653 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SCc_592 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SCc_725 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SCc_652 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SCc_649 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SCc_650 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SCc_661 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SCc_664 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SCc_093 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SCc_724 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SCc_726 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SCc_723 rplL; 50S ribosomal protein L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SCc_585 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SCc_659 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SCc_668 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SCc_656 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SCc_675 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SCc_665 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SCc_176 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SCc_401 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SCc_067 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SCc_654 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SCc_651 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SCc_660 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SCc_066 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SCc_030 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SCc_657 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SCc_667 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SCc_746 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SCc_431 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SCc_031 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SCc_757 rnpA; protein component of ribonuclease P K02914 RP-L34; large subunit ribosomal protein L34
D SCc_402 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SCc_670 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SCc_619 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D SCc_182 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCc_181 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCc_771 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ssz03009]
D SCc_247 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SCc_547 Serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D SCc_080 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D SCc_248 era; GTP-binding protein K03595 era; GTPase
D SCc_065 yhbZ; GTP-binding protein, Obg family K03979 obgE; GTPase [EC:3.6.5.-]
D SCc_277 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D SCc_055 nusA; transcription pausing L factor K02600 nusA; transcription termination/antitermination protein NusA
D SCc_470 nusB; transcription termination, L factor K03625 nusB; transcription antitermination protein NusB
D SCc_727 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D SCc_121 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SCc_070 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SCc_280 rsmC; 16S RNA m2G1207 methylase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SCc_129 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SCc_580 yraL; 16S rRNA 2'-O-ribose C1402 methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SCc_713 yhiQ; putative methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D SCc_089 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SCc_063 ftsJ; ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D SCc_563 yfgB; 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SCc_376 yciL; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SCc_430 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D SCc_179 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SCc_174 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D SCc_618 prmB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D SCc_429 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SCc_018 yqgF; putative Holliday jonction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SCc_049 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SCc_244 srmB; ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D SCc_557 engA; GTP-binding protein K03977 engA; GTPase
D SCc_074 rimN; putative ribosome maturation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SCc_053 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D SCc_056 yhbC; ribosome maturation protein K09748 rimP; ribosome maturation factor RimP
D SCc_263 conserved hypothetical protein, Predicted metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D SCc_421 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:ssz03016]
D SCc_594 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SCc_317 gltX; glutamyl-tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SCc_223 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SCc_112 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SCc_260 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SCc_537 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SCc_269 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SCc_451 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SCc_192 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SCc_351 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SCc_167 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SCc_306 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SCc_404 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SCc_517 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SCc_330 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SCc_748 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SCc_560 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SCc_400 pheS; phenylalanyl-tRNA synthetase, a subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SCc_399 pheT; phenylalanyl-tRNA synthetase, b subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SCc_339 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SCc_635 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SCc_443 ycfF; purine nucleoside phosphoramidasepurine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SCc_576 yggH; tRNA(m7G46)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SCc_492 truA; pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SCc_052 truB; tRNA pseudouridine 55 synthetase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SCc_565 iscS; cysteine desulfurase-NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCc_074 rimN; putative ribosome maturation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SCc_083 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SCc_761 thdF; GTP-binding protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SCc_772 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SCc_094 cysQ; CysQ/AmtA K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SCc_758 rpmH; 50S ribosomal protein L34 K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SCc_581 drnpB; RNase P K01978 rnpB; M1 RNA
D SCc_383 rnt; exoribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D SCc_026 rph; rph, ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D SCc_359 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D SCc_024 glyQ; glycyl-tRNA synthetase a subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SCc_023 glyS; glycyl-tRNA synthetase, b subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SCc_571 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SCc_707 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D SCc_350 cmoA; tRNA cmo(5)U34 methyltransferase, SAM-dependent K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D SCc_349 cmoB; tRNA mo(5)U34 methyltransferase, SAM-dependent K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D SCc_175 trmD; tRNA (guanine-n1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SCc_566 trmJ; tRNA/rRNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D SCc_408 trmU; tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SCc_688 sirA; tRNA 2-thiouridine synthesizing protein A K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D SCc_643 yheL; sulfur transfer protein complex, TusB subunit K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D SCc_642 yheM; sulfur transfer protein complex, TusC subunit K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D SCc_641 yheN; sulfur transfer protein complex, TusD subunit K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D SCc_319 yccK; putative membrane protein, putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D SCc_190 ygfZ; putative folate-dependent regulatory protein involved in one-carbon metabolism K06980 ygfZ; tRNA-modifying protein YgfZ
D SCc_285 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SCc_153 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SCc_152 hypothetical protein, radical SAM superfamily K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SCc_588 yqcD; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SCc_464 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SCc_221 mesJ; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SCc_355 yeaZ; putative glycoprotein endopeptidase, M22 peptidase-like protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SCc_593 gcp; putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SCc_081 yjeE; ATPase with strong ADP affinity K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SCc_088 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SCc_050 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ssz03012]
D SCc_054 infB; initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SCc_403 infC; initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SCc_206 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D SCc_647 tuf1; elongation factor Tu K02358 tuf; elongation factor Tu
D SCc_646 fusA; elongation factor G K02355 fusA; elongation factor G
D SCc_416 prfA; peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1
D SCc_208 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D SCc_415 hemK; N5-glutamine methyltransferase, release factors activity modulator K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SCc_420 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SCc_521 infA; initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SCc_095 efp; elongation factor P K02356 efp; elongation factor P
D SCc_076 poxA; lysyl-tRNA synthetase, class II K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D SCc_096 yjeK; putative aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D SCc_191 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D SCc_282 prfC; peptide chain release factor RF-3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:ssz03110]
D SCc_180 clpB; protease of ClpA/ClpB type K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D SCc_483 clpX; ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SCc_365 htpG; chaperone Hsp90, heat shock protein K04079 HSP90A; molecular chaperone HtpG
D SCc_109 dnaK; chaperone Hsp70 K04043 dnaK; molecular chaperone DnaK
D SCc_097 groEL; chaperone Hsp60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SCc_110 dnaJ; Hsp70 co-chaperone K03686 dnaJ; molecular chaperone DnaJ
D SCc_125 djlA; Dna-J like membrane chaperone protein K05801 djlA; DnaJ like chaperone protein
D SCc_242 grpE; Hsp70 co-chaperone K03687 GRPE; molecular chaperone GrpE
D SCc_098 groES; chaperone Hsp10 K04078 groES; chaperonin GroES
D SCc_148 htrA; periplasmic serine protease Do, heat shock protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SCc_062 hflB; ATP-dependent protease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SCc_001 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SCc_039 protein-export protein K03071 secB; preprotein translocase subunit SecB
D SCc_486 ppiD; peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D SCc_640 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D SCc_123 surA; peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D SCc_706 trxA; thioredoxin K03671 TXN; thioredoxin
D SCc_384 grxD; monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D SCc_767 dsbA; periplasmic protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
C 04131 Membrane trafficking [BR:ssz04131]
D SCc_564 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SCc_448 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SCc_296 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCc_388 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SCc_365 htpG; chaperone Hsp90, heat shock protein K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:ssz03051]
D SCc_365 htpG; chaperone Hsp90, heat shock protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ssz03032]
D SCc_236 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SCc_485 hupB; histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SCc_398 himA; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D SCc_512 himD; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D SCc_756 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D SCc_708 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SCc_591 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SCc_710 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCc_219 dnaE; DNA polymerase III, a subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SCc_755 dnaN; DNA polymerase III, b subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCc_749 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SCc_258 holA; DNA polymerase III, d subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SCc_440 holB; DNA polymerase III, d' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SCc_237 dnaQ; DNA polymerase III, e subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SCc_366 dnaX; DNA polymerase III, g and t subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SCc_281 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SCc_766 polA; 5'-3' exonuclease domain of DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SCc_315 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SCc_460 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SCc_754 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SCc_602 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SCc_601 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SCc_374 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ssz03036]
D SCc_247 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SCc_337 hns; DNA-binding protein H-ns (histone-like protein hlp-II) K03746 hns; DNA-binding protein H-NS
D SCc_485 hupB; histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SCc_398 himA; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D SCc_512 himD; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D SCc_756 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D SCc_578 diaA; DnaA initiator-associating protein K12961 diaA; DnaA initiator-associating protein
D SCc_589 fis; DNA-bending protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SCc_084 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SCc_141 ftsA; ATP-binding cell division protein K03590 ftsA; cell division protein FtsA
D SCc_161 ygbQ; essential cell division protein K05589 ftsB; cell division protein FtsB
D SCc_131 ftsI; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SCc_130 ftsL; cell division protein K03586 ftsL; cell division protein FtsL
D SCc_140 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D SCc_136 ftsW; cell division membrane protein involved in shape determination K03588 ftsW; cell division protein FtsW
D SCc_142 ftsZ; cytoskeletal cell division protein K03531 ftsZ; cell division protein FtsZ
D SCc_082 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SCc_356 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D SCc_357 minD; septum site-determining protein K03609 minD; septum site-determining protein MinD
D SCc_358 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D SCc_740 mreB; rod shape-determining protein MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SCc_741 cell wall structural complex MreBCD transmembrane component MreC K03570 mreC; rod shape-determining protein MreC
D SCc_742 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D SCc_255 mrdB; rod shape determining protein RodA K05837 rodA; rod shape determining protein RodA
D SCc_602 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SCc_601 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SCc_772 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SCc_765 engB; putative GTPase, involved in coordination of cell cycle, engB family K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ssz03400]
D SCc_243 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SCc_341 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SCc_028 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SCc_032 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SCc_623 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SCc_315 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SCc_766 polA; 5'-3' exonuclease domain of DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SCc_709 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SCc_551 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SCc_458 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SCc_686 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SCc_722 rpoB; RNA polymerase, b subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SCc_721 rpoC; RNA polymerase, b' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SCc_674 rpoA; RNA polymerase, a subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SCc_413 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SCc_488 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D SCc_219 dnaE; DNA polymerase III, a subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SCc_755 dnaN; DNA polymerase III, b subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCc_749 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SCc_258 holA; DNA polymerase III, d subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SCc_440 holB; DNA polymerase III, d' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SCc_237 dnaQ; DNA polymerase III, e subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SCc_366 dnaX; DNA polymerase III, g and t subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SCc_281 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SCc_710 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCc_198 exodeoxyribonuclease V, b chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D SCc_197 exodeoxyribonuclease V, g chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D SCc_199 exodeoxyribonuclease V, a chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SCc_745 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SCc_091 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D SCc_460 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SCc_754 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SCc_374 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SCc_485 hupB; histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SCc_589 fis; DNA-bending protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SCc_398 himA; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D SCc_512 himD; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D SCc_337 hns; DNA-binding protein H-ns (histone-like protein hlp-II) K03746 hns; DNA-binding protein H-NS
D SCc_461 nrdA; ribonucleoside-diphosphate reductase (major subunit) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SCc_462 nrdB; ribonucleoside-diphosphate reductase (minor subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ssz03029]
D SCc_054 infB; initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SCc_403 infC; initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SCc_206 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D SCc_647 tuf1; elongation factor Tu K02358 tuf; elongation factor Tu
D SCc_646 fusA; elongation factor G K02355 fusA; elongation factor G
D SCc_248 era; GTP-binding protein K03595 era; GTPase
D SCc_339 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SCc_260 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SCc_351 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SCc_451 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SCc_710 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCc_213 bamA; Subunit of Outer Membrane Protein Assembly Complex: BamA K07277 SAM50; outer membrane protein insertion porin family
D SCc_109 dnaK; chaperone Hsp70 K04043 dnaK; molecular chaperone DnaK
D SCc_242 grpE; Hsp70 co-chaperone K03687 GRPE; molecular chaperone GrpE
D SCc_097 groEL; chaperone Hsp60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SCc_098 groES; chaperone Hsp10 K04078 groES; chaperonin GroES
D SCc_110 dnaJ; Hsp70 co-chaperone K03686 dnaJ; molecular chaperone DnaJ
D SCc_565 iscS; cysteine desulfurase-NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCc_384 grxD; monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D SCc_475 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SCc_760 yidC; preprotein translocase, membrane component K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCc_365 htpG; chaperone Hsp90, heat shock protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ssz02000]
D SCc_511 msbA; lipid transporter ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D SCc_677 sbp; sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SCc_308 cysU; sulfate transport ABC transporter protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D SCc_309 cysW; sulfate transport system permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D SCc_310 cysA; sulfate transport system ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SCc_128 tbpA; thiamine transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D SCc_127 thiP; thiamine transporter membrane protein K02063 thiP; thiamine transport system permease protein
D SCc_126 thiQ; thiamine transporter ATP-binding subunit K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D SCc_607 mlaD; putative ABC transport system substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SCc_608 mlaE; integral membrane component of the phospholipid ABC transporte K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SCc_609 mlaF; putative ABC transporter ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SCc_606 mlaC; toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D SCc_605 mlaB; anti-sigma-factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D SCc_543 glnH; glutamine transport system substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D SCc_544 glnP; glutamine ABC transporter permease protein K10037 glnP; glutamine transport system permease protein
D SCc_545 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SCc_367 znuA; zinc/manganese transport system substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D SCc_368 znuB; high-affinity zinc transport system permease protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D SCc_369 znuC; high-affinity zinc transport system ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D SCc_751 lptF; lipopolysaccharide export system permease protein K07091 lptF; lipopolysaccharide export system permease protein
D SCc_752 lptG; lipopolysaccharide export system permease protein K11720 lptG; lipopolysaccharide export system permease protein
D SCc_613 lptB; putative ABC transporter ATP-binding protein lipopolysaccharide K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SCc_410 lolE; Lipoprotein releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D SCc_412 lolC; Lipoprotein releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D SCc_411 lolD; Lipoprotein releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SCc_274 yadH; antibiotic transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SCc_273 yadG; antibiotic transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCc_393 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SCc_348 yfeH; putative sodium/bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SCc_386 mdtK; multidrug resistance protein, MATE family K26939 norM; MATE family, multidrug efflux pump
D SCc_325 proP; MFS transporter, MHS family, proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D SCc_226 emrB; MFS transporter, DHA2 family, multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D SCc_424 ynfM; putative transport protein, major facilitator superfamily (MFS) of permeases K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D SCc_639 yhfC; putative transport protein, major facilitator superfamily (MFS) of permeases K06141 tsgA; MFS transporter, TsgA protein
D SCc_311 ptsI; phosphotransferase system (PTS) enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SCc_312 ptsH; histidine-containing phosphocarrier protein of the phosphotransferase system (PTS) K02784 ptsH; phosphocarrier protein HPr
D SCc_620 fruB; fused fructose-specific PTS enzymes K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D SCc_442 ptsG; fused glucose-specific PTS enzymes: IIBcomponent, IIC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCc_268 nagE; used N-acetyl glucosamine specific PTS enzymes: IIC component, IIB component, IIA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SCc_622 fruA; fused fructose-specific PTS enzymes K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCc_614 ptsN; PTS system, nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D SCc_077 yjeP; putative mechanosensitive channel K22051 mscM; miniconductance mechanosensitive channel
D SCc_298 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D SCc_288 tolQ; biopolymer transport protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D SCc_289 tolR; biopolymer transport protein TolR K03560 tolR; biopolymer transport protein TolR
D SCc_506 ompN; porin K09476 ompF; outer membrane pore protein F
D SCc_501 ompA; outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D SCc_540 fimD; fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D SCc_599 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
D SCc_213 bamA; Subunit of Outer Membrane Protein Assembly Complex: BamA K07277 SAM50; outer membrane protein insertion porin family
D SCc_558 bamB; Subunit of Outer Membrane Protein Assembly Complex: BamB K17713 bamB; outer membrane protein assembly factor BamB
D SCc_178 bamD; Subunit of Outer Membrane Protein Assembly Complex: BamD K05807 bamD; outer membrane protein assembly factor BamD
D SCc_238 smpA; Subunit of Outer Membrane Protein Assembly Complex: SmpA K06186 bamE; outer membrane protein assembly factor BamE
D SCc_612 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D SCc_611 lptC; putative exported protein YrbK K11719 lptC; lipopolysaccharide export system protein LptC
D SCc_124 lptD; LPS-assembly lipoprotein K04744 lptD; LPS-assembly protein
D SCc_259 lptE; LPS-assembly lipoprotein K03643 lptE; LPS-assembly lipoprotein
D SCc_262 ybeX; putative integral membrane protein K06189 corC; hemolysin (HlyC) family protein
D SCc_625 lysP; lysine transporter K11733 lysP; lysine-specific permease
D SCc_361 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D SCc_548 ansP; L-asparagine permease K11738 ansP; L-asparagine permease
D SCc_712 pitA; low-affinity inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter
D SCc_075 gltP; sodium:dicarboxylate symporter K11102 gltP; proton glutamate symport protein
D SCc_324 cvrA; potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D SCc_012 trkH; potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D SCc_069 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein
D SCc_528 sdaC; serine transporter K03837 sdaC; serine transporter
D SCc_452 mviN; virulence factor mviN-like protein, membrane protein, maybe involved in polysaccharydes biosynthesis K03980 murJ; putative peptidoglycan lipid II flippase
D SCc_136 ftsW; cell division membrane protein involved in shape determination K03588 ftsW; cell division protein FtsW
D SCc_292 pal; peptidoglycan-associated outer membrane lipoprotein member of Tol-Pal system K03640 pal; peptidoglycan-associated lipoprotein
D SCc_290 tolA; cell envelope integrity inner membrane protein TolA K03646 tolA; colicin import membrane protein
D SCc_291 tolB; translocation protein TolB K03641 tolB; TolB protein
D SCc_227 emrA; multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D SCc_295 pnuC; nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D SCc_630 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D SCc_629 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:ssz02044]
D SCc_599 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
D SCc_020 yggT; YggT family protein K02221 yggT; YggT family protein
D SCc_540 fimD; fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D SCc_145 preprotein translocase subunit (ATPase) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCc_039 protein-export protein K03071 secB; preprotein translocase subunit SecB
D SCc_466 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D SCc_728 preprotein translocase IISP family, membrane subunit K03073 secE; preprotein translocase subunit SecE
D SCc_467 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SCc_059 preprotein translocase IISP family, auxillary membrane component K03075 secG; preprotein translocase subunit SecG
D SCc_669 membrane-embebed preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY
D SCc_172 ffh; Signal Recognition Particle (SRP) component with 4.5S RNA K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SCc_689 ftsY; Cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor
D SCc_465 yajC; SecYEG protein translocase auxillary subunit K03210 yajC; preprotein translocase subunit YajC
D SCc_760 yidC; preprotein translocase, membrane component K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins
C 02022 Two-component system [BR:ssz02022]
D SCc_631 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
C 02035 Bacterial motility proteins [BR:ssz02035]
D SCc_540 fimD; fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D SCc_542 fimA; major type 1 subunit fimbrin (pilin) K07352 sfmA; type 1 fimbrial protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ssz04812]
D SCc_740 mreB; rod shape-determining protein MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SCc_142 ftsZ; cytoskeletal cell division protein K03531 ftsZ; cell division protein FtsZ
D SCc_141 ftsA; ATP-binding cell division protein K03590 ftsA; cell division protein FtsA
D SCc_356 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D SCc_357 minD; septum site-determining protein K03609 minD; septum site-determining protein MinD
D SCc_358 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
C 04147 Exosome [BR:ssz04147]
D SCc_365 htpG; chaperone Hsp90, heat shock protein K04079 HSP90A; molecular chaperone HtpG
D SCc_150 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCc_448 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SCc_185 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SCc_388 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SCc_097 groEL; chaperone Hsp60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SCc_109 dnaK; chaperone Hsp70 K04043 dnaK; molecular chaperone DnaK
D SCc_014 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SCc_556 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SCc_647 tuf1; elongation factor Tu K02358 tuf; elongation factor Tu
D SCc_443 ycfF; purine nucleoside phosphoramidasepurine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SCc_348 yfeH; putative sodium/bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SCc_364 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SCc_572 lpdA; pyruvate and 2-oxoglutarate dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCc_354 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SCc_676 tpiA; triose phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SCc_296 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ssz02048]
D SCc_370 hha; hemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D SCc_142 ftsZ; cytoskeletal cell division protein K03531 ftsZ; cell division protein FtsZ
D SCc_740 mreB; rod shape-determining protein MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SCc_602 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SCc_601 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SCc_317 gltX; glutamyl-tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SCc_565 iscS; cysteine desulfurase-NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ssz01504]
D SCc_599 tolC; outer membrane channel protein K12340 tolC; outer membrane protein
D SCc_506 ompN; porin K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ssz03100]
D SCc_318 trnA1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SCc_716 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SCc_328 trnR2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCc_320 trnR3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCc_170 trnR1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCc_697 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCc_489 trnN; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SCc_183 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SCc_326 pseudogene K14222 tRNA-Cys; tRNA Cys
D SCc_266 trnQ1; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SCc_267 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SCc_456 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCc_731 trnG1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCc_696 trnH; tRNA-His K14226 tRNA-His; tRNA His
D SCc_717 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SCc_058 tRNAL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCc_265 trnL3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCc_327 trnL2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCc_695 trnL1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCc_753 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCc_294 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SCc_057 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D SCc_200 trnM1; tRNA-Met K14230 tRNA-Met; tRNA Met
D SCc_264 trnM2; tRNA-Met K14230 tRNA-Met; tRNA Met
D SCc_323 trnI1; tRNA-Ile K14230 tRNA-Met; tRNA Met
D SCc_099 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SCc_694 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SCc_169 trnS2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCc_446 trnS1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCc_459 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCc_733 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCc_730 trnT1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCc_715 tRrnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SCc_732 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SCc_316 trnV1; tRNA-Val K14237 tRNA-Val; tRNA Val
D SCc_387 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D SCc_181 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCc_771 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCc_182 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCc_422 ffs; signal recognition particle RNA K01983 ffs; SRP RNA
D SCc_581 drnpB; RNase P K01978 rnpB; M1 RNA
D SCc_240 tmRNA; tmRNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SCc_261 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D SCc_195 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SCc_490 apbE; thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SCc_441 ycfH; putative deoxyribonuclease, tatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SCc_072 def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SCc_344 rnfD; putative NADH:ubiquinone oxidoreductase, subunit RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D SCc_345 rnfC; putative NADH:ubiquinone oxidoreductase, subunit RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D SCc_346 rnfB; putative NADH:ubiquinone oxidoreductase, subunit RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D SCc_463 conserved hypothetical protein, 2Fe-2S ferredoxin-related protein K11107 yfaE; ferredoxin
D SCc_343 rnfG; putative NADH:ubiquinone oxidoreductase, subunit RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D SCc_342 rnfE; putative NADH:ubiquinone oxidoreductase, subunit RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D SCc_347 rnfA; putative NADH:ubiquinone oxidoreductase, subunit RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D SCc_271 fldA; flavodoxin 1 K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D SCc_371 yciS; putative membrane protein K08992 lapA; lipopolysaccharide assembly protein A
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SCc_360 cspC; cold shock protein K03704 cspA; cold shock protein
D SCc_454 cspE; RNA chaperone, transcription antiterminator K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D SCc_481 tig; tig peptidyl-prolyl cis/trans isomerase (trigger factor) K03545 tig; trigger factor
D SCc_239 smpB; tmRNA-binding protein K03664 smpB; SsrA-binding protein
D SCc_628 yhgI; iron-sulfur protein which is able to transfer its [4Fe-4S] iron-sulfur cluster to apo-aconitase K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D SCc_692 rmuC; putative recombination limiting protein K09760 rmuC; DNA recombination protein RmuC
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SCc_286 brnQ; branched-chain amino acid:cation transporter, LIVCS family K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D SCc_382 yciB; putative intracellular septation protein K06190 ispZ; intracellular septation protein
C 99993 Cell motility
C 99995 Signaling proteins
D SCc_764 typA; GTP-binding elongation factor family protein K06207 typA; GTP-binding protein
C 99992 Structural proteins
D SCc_518 lolA; outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D SCc_417 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D SCc_321 vacJ; VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D SCc_214 periplasmic chaperone K06142 hlpA; outer membrane protein
D SCc_165 nlpD; putative outer membrane lipoprotein K06194 nlpD; lipoprotein NlpD
D SCc_562 rodZ; rod shape-determining membrane protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D SCc_120 apaG; protein associated with Co2+ and Mg2+ efflux K06195 apaG; ApaG protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SCc_496 cvpA; embrane protein required for colicin V K03558 cvpA; membrane protein required for colicin V production
D SCc_147 yadR; A-type iron-sulfur protein K15724 erpA; iron-sulfur cluster insertion protein
D SCc_395 sufA; FeS assembly scaffold protein K05997 sufA; Fe-S cluster assembly protein SufA
D SCc_394 sufB; cysteine desulfurase activator complex subunit SufB K09014 sufB; Fe-S cluster assembly protein SufB
D SCc_392 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D SCc_425 ydjM; putative inner membrane protein regulated by LexA K07038 K07038; inner membrane protein
D SCc_390 sufE; cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D SCc_426 yceA; putative Rhodanese/Cell cycle control phosphatase K07146 K07146; UPF0176 protein
D SCc_407 ycfC; lysogenization regulator K07153 hflD; high frequency lysogenization protein
D SCc_637 damX; non-essential cell division protein K03112 damX; DamX protein
C 99997 Function unknown
D SCc_550 hypothetical protein K06890 K06890; uncharacterized protein
D SCc_579 yraM; LppC family lipoprotein K07121 K07121; uncharacterized protein
D SCc_759 hypothetical protein K08998 K08998; uncharacterized protein
D SCc_021 hypothetical protein K09131 K09131; uncharacterized protein
D SCc_231 hypothetical protein K09158 K09158; uncharacterized protein
D SCc_509 hypothetical protein K09791 K09791; uncharacterized protein
D SCc_586 hypothetical protein K09908 K09908; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 18, 2024