+F Repair protein KO #

  DNA Repair and Recombination Proteins - Staphylococcus aureus subsp. aureus ECT-R 2 (MSSA)

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AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D ECTR2_2399 methylated-DNA-[protein]-cysteine S-methyltransferase family protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D ECTR2_643 FAD binding domain of DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E ECTR2_534 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E ECTR2_2204 DNA-3-methyladenine glycosylase family protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E ECTR2_1739 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E ECTR2_1306 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D ECTR2_2346 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ECTR2_1628 ytkD; nucleoside triphosphatase YtkD K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D ECTR2_2399 methylated-DNA-[protein]-cysteine S-methyltransferase family protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D ECTR2_643 FAD binding domain of DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E ECTR2_534 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E ECTR2_2204 DNA-3-methyladenine glycosylase family protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E ECTR2_1739 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E ECTR2_1505 DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] E ECTR2_1529 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E ECTR2_1306 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E ECTR2_1407 apurinic endonuclease (APN1) family protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D RecJ E ECTR2_1484 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNA ligase E ECTR2_1776 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I E ECTR2_1530 polA; DNA polymerase I (POL I) K02335 polA; DNA polymerase I [EC:2.7.7.7] C NER (nucleotide excision repair) D GGR (global genome repair) factors E ECTR2_709 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A E ECTR2_708 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B E ECTR2_1000 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C E ECTR2_1777 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E ECTR2_1530 polA; DNA polymerase I (POL I) K02335 polA; DNA polymerase I [EC:2.7.7.7] E ECTR2_1776 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F ECTR2_496 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F ECTR2_497 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F ECTR2_2086 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F ECTR2_1984 DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta F ECTR2_1066 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) F ECTR2_443 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] C MMR (mismatch excision repair) D Mismatch and loop recognition factors E ECTR2_1151 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS E ECTR2_998 mutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2 D Molecular matchmaker E ECTR2_1152 mutL; DNA mismatch repair protein mutL. domain protein K03572 mutL; DNA mismatch repair protein MutL E ECTR2_1153 DNA mismatch repair protein mutL. domain protein K03572 mutL; DNA mismatch repair protein MutL D Strand discrimination factor D DNA exonucleases E ECTR2_1375 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] E ECTR2_1374 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DNA polymerase III holoenzyme E ECTR2_1543 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E ECTR2_1120 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] E ECTR2_2 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E ECTR2_1436 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E ECTR2_424 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E ECTR2_1765 exonuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E ECTR2_413 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNA ligase E ECTR2_1776 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E ECTR2_1777 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E ECTR2_1953 ssb; single-strand binding family protein K03111 ssb; single-strand DNA-binding protein E ECTR2_327 ssb; single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein) K03111 ssb; single-strand DNA-binding protein E ECTR2_1856 ssb; single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein) K03111 ssb; single-strand DNA-binding protein B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E ECTR2_1468 exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] E ECTR2_1141 recA; protein RecA K03553 recA; recombination protein RecA E ECTR2_1490 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E ECTR2_1489 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E ECTR2_1068 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] E ECTR2_1205 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 E ECTR2_1204 sbcD; nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 D RecFOR pathway proteins E ECTR2_1141 recA; protein RecA K03553 recA; recombination protein RecA E ECTR2_479 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms E ECTR2_4 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF E ECTR2_1083 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E ECTR2_1484 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] E ECTR2_1416 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) E ECTR2_415 recR; recombination protein RecR K06187 recR; recombination protein RecR E ECTR2_1371 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) E ECTR2_1303 recU; recombination protein U K03700 recU; recombination protein U E ECTR2_1490 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E ECTR2_1489 ruvB; holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AddAB pathway proteins E ECTR2_823 addA; recombination helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] E ECTR2_822 addB; ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Other HR factor D Archaeal homologous recombinant proteins E ECTR2_1205 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 E ECTR2_1204 sbcD; nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F ECTR2_6 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F ECTR2_5 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F ECTR2_1106 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor F ECTR2_1325 DNA-binding protein HU 1 (DNA-binding protein II) (HB) K03530 hupB; DNA-binding protein HU-beta D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F ECTR2_1858 recombinase, phage RecT family protein K07455 recT; recombination protein RecT F ECTR2_1484 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] F ECTR2_1416 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) F ECTR2_415 recR; recombination protein RecR K06187 recR; recombination protein RecR F ECTR2_1776 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator E Supressor F ECTR2_671 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F ECTR2_1333 ATP-dependent DNA helicase, RecQ family protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F ECTR2_709 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A F ECTR2_708 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D ECTR2_1766 impB/mucB/samB family protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D ECTR2_1221 impB/mucB/samB family protein K03502 umuC; DNA polymerase V C Other SOS response factors D ECTR2_1141 recA; protein RecA K03553 recA; recombination protein RecA D ECTR2_1198 lexA; lexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D ECTR2_1371 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D ECTR2_1953 ssb; single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D ECTR2_327 ssb; single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein) K03111 ssb; single-strand DNA-binding protein D ECTR2_1856 ssb; single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein) K03111 ssb; single-strand DNA-binding protein D ECTR2_1744 recX family protein K03565 recX; regulatory protein B Other factors with a suspected DNA repair function C DNA polymerase D ECTR2_997 PHP domain protein K02347 polX; DNA polymerase (family X) C DNA helicases D ECTR2_1309 dnaQ family exonuclease/DinG family helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] C Modulation of nucleotide pools D ECTR2_2346 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ECTR2_1628 ytkD; nucleoside triphosphatase YtkD K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ECTR2_681 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ECTR2_682 ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide reductase small subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C Others D ECTR2_1544 DHHA1 domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024