+D GENES KO #

  KEGG Orthology (KO) - Shewanella woodyi

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:swd00010] D Swoo_0562 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Swoo_1279 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Swoo_3770 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Swoo_0879 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Swoo_3565 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Swoo_2393 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Swoo_2395 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Swoo_0878 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Swoo_4877 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Swoo_3350 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Swoo_2541 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Swoo_2715 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Swoo_0319 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Swoo_0320 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Swoo_0321 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Swoo_1137 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Swoo_1138 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Swoo_0375 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Swoo_2241 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Swoo_1359 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Swoo_2255 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D Swoo_2254 Aldehyde Dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Swoo_2725 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Swoo_0651 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Swoo_2275 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Swoo_1915 Aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D Swoo_4740 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Swoo_2190 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Swoo_3287 phosphotransferase system EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:swd00020] D Swoo_1832 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1] D Swoo_0285 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Swoo_2702 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Swoo_3466 Isocitrate dehydrogenase (NAD(+)) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D Swoo_1837 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Swoo_1838 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Swoo_0321 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Swoo_1137 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Swoo_1138 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Swoo_1840 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Swoo_1839 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Swoo_1835 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Swoo_1836 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Swoo_1833 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Swoo_1834 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Swoo_0509 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D Swoo_0510 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D Swoo_0507 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Swoo_0508 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Swoo_3776 flavocytochrome c K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4] D Swoo_2227 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Swoo_4264 fumarate lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Swoo_1002 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Swoo_4740 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Swoo_0319 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Swoo_0320 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:swd00030] D Swoo_1279 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Swoo_2539 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Swoo_2538 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D Swoo_3220 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Swoo_0346 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Swoo_0876 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Swoo_1280 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Swoo_0955 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Swoo_1282 Phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D Swoo_3549 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Swoo_1119 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D Swoo_3547 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Swoo_2275 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Swoo_3892 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D Swoo_3689 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Swoo_2537 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D Swoo_2536 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Swoo_3940 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D Swoo_3000 conserved hypothetical protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D Swoo_0879 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Swoo_3770 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:swd00040] D Swoo_1714 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Swoo_0346 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Swoo_3666 short-chain dehydrogenase/reductase SDR K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175] D Swoo_2824 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D Swoo_0813 Aldehyde Dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] C 00051 Fructose and mannose metabolism [PATH:swd00051] D Swoo_1708 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Swoo_1150 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Swoo_3833 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Swoo_3151 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Swoo_3770 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Swoo_0879 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Swoo_3565 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Swoo_0284 HAD-superfamily hydrolase, subfamily IA, variant 3 K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68] C 00052 Galactose metabolism [PATH:swd00052] D Swoo_0651 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Swoo_2085 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Swoo_0652 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Swoo_3662 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Swoo_2084 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Swoo_1713 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Swoo_0595 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Swoo_3663 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Swoo_1714 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Swoo_2275 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Swoo_0562 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Swoo_3665 2-keto-3-deoxy-galactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D Swoo_2210 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:swd00053] D Swoo_3940 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D Swoo_2824 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00500 Starch and sucrose metabolism [PATH:swd00500] D Swoo_2210 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Swoo_1714 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Swoo_4379 glycoside hydrolase family 17 K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58] D Swoo_4366 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_3058 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_1149 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_4365 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_1147 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Swoo_2201 Glucan 1,4-alpha-glucosidase K01178 SGA1; glucoamylase [EC:3.2.1.3] D Swoo_1436 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D Swoo_2190 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Swoo_3416 alpha amylase catalytic region K00701 cgt; cyclomaltodextrin glucanotransferase [EC:2.4.1.19] D Swoo_1437 Kojibiose phosphorylase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64] D Swoo_2275 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Swoo_0562 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Swoo_1279 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Swoo_1708 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Swoo_1150 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Swoo_3833 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:swd00520] D Swoo_1100 glycoside hydrolase family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D Swoo_2348 hypothetical protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D Swoo_1807 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Swoo_1311 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Swoo_3941 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Swoo_0561 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Swoo_2190 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Swoo_1313 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Swoo_0943 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D Swoo_1312 ATPase BadF/BadG/BcrA/BcrD type K18676 gspK; glucosamine kinase [EC:2.7.1.8] D Swoo_1708 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Swoo_1150 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Swoo_3833 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Swoo_4892 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Swoo_3566 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Swoo_4895 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Swoo_1210 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D Swoo_2304 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D Swoo_1018 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D Swoo_1019 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D Swoo_4227 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Swoo_4707 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Swoo_1662 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Swoo_1655 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] D Swoo_1654 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Swoo_1660 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Swoo_3287 phosphotransferase system EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D Swoo_0562 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Swoo_2275 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Swoo_1714 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Swoo_2085 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Swoo_0652 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Swoo_3662 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Swoo_2084 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Swoo_1713 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Swoo_0595 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Swoo_3663 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Swoo_1279 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Swoo_3151 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] C 00620 Pyruvate metabolism [PATH:swd00620] D Swoo_2725 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Swoo_1137 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Swoo_1138 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Swoo_0319 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Swoo_0320 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Swoo_0321 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Swoo_2883 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Swoo_2241 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Swoo_1391 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Swoo_1359 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Swoo_0375 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Swoo_2255 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D Swoo_2886 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Swoo_2887 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Swoo_2541 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Swoo_0545 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Swoo_0544 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Swoo_1809 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Swoo_2254 Aldehyde Dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Swoo_0923 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D Swoo_3368 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Swoo_2563 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Swoo_3214 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Swoo_2611 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Swoo_2954 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Swoo_2968 ThiJ/PfpI domain protein K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D Swoo_0902 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Swoo_4423 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Swoo_3336 oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Swoo_1740 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Swoo_1741 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Swoo_3335 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Swoo_3337 sodium pump decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D Swoo_1002 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Swoo_2227 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Swoo_4264 fumarate lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Swoo_0509 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D Swoo_0510 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D Swoo_0507 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Swoo_0508 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Swoo_3776 flavocytochrome c K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4] D Swoo_0327 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Swoo_4740 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Swoo_2715 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Swoo_2236 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D Swoo_1528 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D Swoo_3202 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Swoo_4550 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:swd00630] D Swoo_2234 isocitrate lyase and phosphorylmutase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D Swoo_2725 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Swoo_2236 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D Swoo_1528 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D Swoo_1002 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Swoo_1832 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1] D Swoo_0285 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Swoo_3202 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Swoo_3881 Catalase K03781 katE; catalase [EC:1.11.1.6] D Swoo_3394 Catalase K03781 katE; catalase [EC:1.11.1.6] D Swoo_4923 Catalase domain protein K03781 katE; catalase [EC:1.11.1.6] D Swoo_1022 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Swoo_2034 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Swoo_0347 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Swoo_0447 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Swoo_4643 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_1130 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_2101 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_1380 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Swoo_3967 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Swoo_3969 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Swoo_0321 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Swoo_3968 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Swoo_2047 6-phosphogluconate dehydrogenase NAD-binding K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D Swoo_3134 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Swoo_2536 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Swoo_3926 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Swoo_0937 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Swoo_4809 molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Swoo_4813 molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Swoo_3925 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D Swoo_4812 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Swoo_4808 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Swoo_4811 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma D Swoo_4807 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma D Swoo_1402 putative esterase K01432 AFMID; arylformamidase [EC:3.5.1.9] D Swoo_3286 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:swd00640] D Swoo_2725 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Swoo_3221 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D Swoo_2886 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Swoo_2887 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Swoo_2278 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Swoo_2279 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Swoo_1035 Transketolase central region K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Swoo_2280 Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Swoo_0321 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Swoo_2883 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Swoo_0272 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Swoo_0021 fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Swoo_3026 fatty acid oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Swoo_0545 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Swoo_0544 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Swoo_3862 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Swoo_1114 aminotransferase class-III K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D Swoo_1839 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Swoo_1840 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Swoo_1113 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Swoo_3201 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Swoo_2498 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D Swoo_2497 2-methylisocitrate dehydratase, Fe/S-dependent K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D Swoo_2496 AcnD-accessory protein PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D Swoo_0285 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Swoo_2499 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:swd00650] D Swoo_3202 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Swoo_0214 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Swoo_0021 fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Swoo_3026 fatty acid oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Swoo_3107 Trans-2-enoyl-CoA reductase (NAD(+)) K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Swoo_2241 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Swoo_1391 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Swoo_1741 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Swoo_3335 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Swoo_0109 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D Swoo_1835 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Swoo_1836 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Swoo_1833 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Swoo_1834 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Swoo_0509 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D Swoo_0510 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D Swoo_0507 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Swoo_0508 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Swoo_3776 flavocytochrome c K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4] D Swoo_4739 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Swoo_3862 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Swoo_3863 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Swoo_2883 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Swoo_1137 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Swoo_1138 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Swoo_3227 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Swoo_3228 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D Swoo_3229 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D Swoo_1955 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Swoo_0442 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Swoo_1954 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Swoo_0443 amino acid-binding ACT domain protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:swd00660] D Swoo_1955 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Swoo_0442 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Swoo_1954 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Swoo_0443 amino acid-binding ACT domain protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D Swoo_1839 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Swoo_1840 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Swoo_4548 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Swoo_4547 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Swoo_4549 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:swd00562] D Swoo_1772 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Swoo_1113 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Swoo_3201 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Swoo_3565 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:swd00190] D Swoo_2860 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Swoo_2861 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Swoo_2862 NADH dehydrogenase I, D subunit K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D Swoo_2863 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Swoo_2864 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Swoo_2865 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Swoo_2866 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Swoo_2867 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Swoo_2868 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D Swoo_2869 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Swoo_2870 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Swoo_2871 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Swoo_2872 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Swoo_2098 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Swoo_0369 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Swoo_1835 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Swoo_1836 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Swoo_1833 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Swoo_1834 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Swoo_0509 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D Swoo_0510 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D Swoo_0507 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Swoo_0508 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Swoo_4166 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Swoo_4165 Cytochrome b/b6 domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Swoo_4164 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Swoo_0170 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Swoo_0429 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Swoo_0430 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D Swoo_0175 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D Swoo_0177 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D Swoo_0178 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D Swoo_0176 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D Swoo_0171 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Swoo_2425 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Swoo_2424 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Swoo_2423 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D Swoo_2422 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Swoo_0431 cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D Swoo_0432 cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D Swoo_0433 ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D Swoo_1565 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Swoo_1566 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Swoo_1567 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D Swoo_4900 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Swoo_4898 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Swoo_4899 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Swoo_4901 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Swoo_4897 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Swoo_4904 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Swoo_4902 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Swoo_4903 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Swoo_2464 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms [PATH:swd00710] D Swoo_0878 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Swoo_2393 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Swoo_2395 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Swoo_0879 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Swoo_3770 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Swoo_0876 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Swoo_0955 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Swoo_0668 Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D Swoo_3565 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Swoo_0346 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Swoo_0327 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Swoo_4740 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Swoo_4423 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Swoo_1002 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Carbon fixation pathways in prokaryotes [PATH:swd00720] D Swoo_2715 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Swoo_0327 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Swoo_1002 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Swoo_2227 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Swoo_4264 fumarate lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Swoo_1835 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Swoo_1836 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Swoo_1833 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Swoo_1834 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Swoo_0509 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D Swoo_0510 succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D Swoo_0507 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Swoo_0508 fumarate reductase respiratory complex transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Swoo_3776 flavocytochrome c K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4] D Swoo_1840 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Swoo_1839 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Swoo_3202 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Swoo_1137 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Swoo_1138 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Swoo_2702 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Swoo_0285 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Swoo_0545 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Swoo_0544 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Swoo_4339 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Swoo_3115 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Swoo_0624 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Swoo_2887 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Swoo_2886 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Swoo_2725 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:swd00680] D Swoo_0373 S-(hydroxymethyl)glutathione synthase K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22] D Swoo_0375 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Swoo_0376 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D Swoo_3926 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Swoo_0937 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Swoo_4809 molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Swoo_4813 molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Swoo_3925 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D Swoo_4812 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Swoo_4808 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Swoo_4811 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma D Swoo_4807 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma D Swoo_1380 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Swoo_0447 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Swoo_1022 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Swoo_3350 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Swoo_0327 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Swoo_1002 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Swoo_0879 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Swoo_3770 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Swoo_3526 trimethylamine-N-oxide reductase TorA K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D Swoo_3525 trimethylamine-N-oxide reductase c-type cytochrome TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D Swoo_3527 cytoplasmic chaperone TorD family protein K03533 torD; TorA specific chaperone D Swoo_3007 ferredoxin-dependent glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D Swoo_2886 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Swoo_2887 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Swoo_2725 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Swoo_2715 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Swoo_4877 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Swoo_3889 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Swoo_2307 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Swoo_3544 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:swd00910] D Swoo_1877 nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Swoo_2626 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Swoo_2635 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Swoo_2640 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Swoo_1860 molybdopterin oxidoreductase K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2] D Swoo_2634 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D Swoo_2633 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D Swoo_2631 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D Swoo_2680 periplasmic nitrate reductase, large subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D Swoo_4110 periplasmic nitrate reductase, large subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D Swoo_2679 Nitrate reductase cytochrome c-type subunit (NapB) K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D Swoo_4111 Nitrate reductase cytochrome c-type subunit (NapB) K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D Swoo_1875 nitrite reductase (NAD(P)H), large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D Swoo_1876 nitrite reductase (NAD(P)H), small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D Swoo_0972 formate-dependent cytochrome c nitrite reductase, c552 subunit K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D Swoo_1417 multicopper oxidase type 3 K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D Swoo_0761 putative nitric oxide reductase (subunit B) transmembrane protein K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D Swoo_1260 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Swoo_4755 conserved hypothetical protein K10535 hao; hydroxylamine dehydrogenase [EC:1.7.2.6] D Swoo_3596 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Swoo_0212 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Swoo_2140 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Swoo_4643 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_1130 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_2101 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_1221 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Swoo_1220 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Swoo_2185 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:swd00920] D Swoo_1687 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Swoo_1686 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Swoo_1689 Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Swoo_4717 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Swoo_0778 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Swoo_0776 sulfite reductase (NADPH) flavoprotein, alpha chain K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D Swoo_0777 sulfite reductase (NADPH) hemoprotein, beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D Swoo_0063 Rhodanese domain protein K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D Swoo_0438 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Swoo_1774 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Swoo_2550 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Swoo_2857 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Swoo_3204 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Swoo_0622 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Swoo_0233 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D Swoo_0234 dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D Swoo_1916 acyl-CoA dehydrogenase domain protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D Swoo_2323 acyl-CoA dehydrogenase domain protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:swd00061] D Swoo_0545 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Swoo_0544 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Swoo_1666 phosphopantetheine-binding K02078 acpP; acyl carrier protein D Swoo_4597 phosphopantetheine-binding K02078 acpP; acyl carrier protein D Swoo_2043 acyl carrier protein K02078 acpP; acyl carrier protein D Swoo_4596 conserved hypothetical protein K02078 acpP; acyl carrier protein D Swoo_2041 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Swoo_2040 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Swoo_1667 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Swoo_1669 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Swoo_2826 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Swoo_4044 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Swoo_3181 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Swoo_3008 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Swoo_4609 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Swoo_4612 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Swoo_2044 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Swoo_2042 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Swoo_4611 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Swoo_3196 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Swoo_2148 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D Swoo_3270 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Swoo_3107 Trans-2-enoyl-CoA reductase (NAD(+)) K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Swoo_2110 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_3995 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2941 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2409 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_4860 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2322 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_4587 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:swd00071] D Swoo_3202 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Swoo_3027 acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Swoo_0020 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Swoo_0021 fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Swoo_3026 fatty acid oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Swoo_0214 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Swoo_2604 Protein of unknown function DUF1974 K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D Swoo_2542 Protein of unknown function DUF1974 K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D Swoo_1504 Protein of unknown function DUF1974 K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D Swoo_1033 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Swoo_2110 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_3995 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2941 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2409 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_4860 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2322 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_4587 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_0375 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Swoo_2241 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Swoo_1359 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:swd00121] D Swoo_2365 Choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:swd00561] D Swoo_3134 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Swoo_4544 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Swoo_0181 Glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Swoo_2039 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Swoo_1158 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Swoo_4331 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Swoo_1989 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Swoo_3176 alpha/beta hydrolase fold K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D Swoo_4259 PGAP1 family protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:swd00564] D Swoo_4874 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Swoo_4358 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Swoo_0935 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Swoo_0181 Glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Swoo_1158 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Swoo_4331 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Swoo_1692 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] D Swoo_1989 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Swoo_0786 Phospholipase A(2) K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Swoo_0051 Lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5] D Swoo_4183 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Swoo_1026 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Swoo_3276 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Swoo_2327 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Swoo_3718 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Swoo_4180 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Swoo_2152 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Swoo_1388 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D Swoo_0462 phosphoesterase PA-phosphatase related K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] D Swoo_2290 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:swd00565] D Swoo_4359 Alkylglycerone-phosphate synthase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] D Swoo_0786 Phospholipase A(2) K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism [PATH:swd00600] D Swoo_3660 sulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8] D Swoo_1311 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Swoo_3941 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Swoo_0561 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism [PATH:swd00590] D Swoo_0786 Phospholipase A(2) K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Swoo_3448 Peptidase M1 membrane alanine aminopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] D Swoo_2919 Arachidonate 15-lipoxygenase K19246 loxA; arachidonate 15-lipoxygenase [EC:1.13.11.33] D Swoo_3415 Lipoxygenase K19246 loxA; arachidonate 15-lipoxygenase [EC:1.13.11.33] D Swoo_2318 hypothetical protein K19246 loxA; arachidonate 15-lipoxygenase [EC:1.13.11.33] C 00591 Linoleic acid metabolism D Swoo_0786 Phospholipase A(2) K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:swd00592] D Swoo_0786 Phospholipase A(2) K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Swoo_3027 acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Swoo_0020 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:swd01040] D Swoo_4712 Stearoyl-CoA 9-desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D Swoo_2898 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Swoo_3734 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Swoo_3210 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:swd00230] D Swoo_4194 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Swoo_4718 NUDIX hydrolase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D Swoo_3547 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Swoo_2275 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Swoo_3689 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Swoo_2980 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Swoo_0295 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Swoo_2745 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Swoo_1564 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Swoo_2744 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Swoo_3322 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Swoo_3321 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Swoo_2078 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Swoo_2707 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Swoo_0296 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Swoo_1792 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Swoo_1539 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Swoo_1952 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Swoo_1951 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Swoo_3345 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Swoo_2746 HAD-superfamily hydrolase, subfamily IIA K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Swoo_4719 HAD-superfamily hydrolase, subfamily IA, variant 3 K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D Swoo_1799 Inosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73] D Swoo_3546 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Swoo_3422 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Swoo_3884 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Swoo_3721 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Swoo_3818 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Swoo_1559 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Swoo_1783 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Swoo_0862 protein of unknown function DUF84 K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D Swoo_1327 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Swoo_1560 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Swoo_4581 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Swoo_2303 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Swoo_2302 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Swoo_3049 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Swoo_2264 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Swoo_2265 metal dependent phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Swoo_4583 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Swoo_0515 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Swoo_3353 (p)ppGpp synthetase I, SpoT/RelA K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D Swoo_1225 putative adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Swoo_0484 putative adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D Swoo_4219 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Swoo_1121 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D Swoo_3459 conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D Swoo_1926 5'-Nucleotidase domain protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D Swoo_1798 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Swoo_3352 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Swoo_4192 Calcineurin phosphoesterase domain protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D Swoo_1012 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D Swoo_1689 Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Swoo_1687 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Swoo_1686 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:swd00240] D Swoo_3577 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Swoo_3578 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Swoo_1172 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Swoo_3761 dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Swoo_2141 Dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D Swoo_4567 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Swoo_2315 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Swoo_3279 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Swoo_1783 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Swoo_3352 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Swoo_4399 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Swoo_3056 protein of unknown function DUF45 K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D Swoo_3351 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Swoo_2310 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Swoo_1979 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Swoo_1539 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Swoo_1952 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Swoo_1951 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Swoo_3345 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Swoo_2746 HAD-superfamily hydrolase, subfamily IIA K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Swoo_2232 HAD-superfamily hydrolase, subfamily IA, variant 1 K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D Swoo_4509 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D Swoo_2743 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Swoo_1926 5'-Nucleotidase domain protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D Swoo_1445 PfkB domain protein K16328 psuK; pseudouridine kinase [EC:2.7.1.83] D Swoo_1446 Indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D Swoo_1120 Purine nucleosidase K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-] D Swoo_3459 conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D Swoo_2048 Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Swoo_1853 N-isopropylammelide isopropylaminohydrolase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Swoo_3049 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Swoo_2303 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Swoo_2302 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Swoo_2265 metal dependent phosphohydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Swoo_3945 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Swoo_1982 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Swoo_4563 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Swoo_3548 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D Swoo_3233 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D Swoo_1230 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:swd00250] D Swoo_2308 Aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Swoo_1236 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Swoo_2298 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Swoo_2686 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Swoo_2749 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Swoo_2267 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Swoo_0447 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Swoo_2485 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Swoo_1178 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D Swoo_0332 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Swoo_0333 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Swoo_4219 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Swoo_2707 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Swoo_1172 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Swoo_4739 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Swoo_3862 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Swoo_3863 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Swoo_1221 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Swoo_1220 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Swoo_2140 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Swoo_0714 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Swoo_4643 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_1130 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_2101 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_3577 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Swoo_3578 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Swoo_1322 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Swoo_4892 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Swoo_2980 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:swd00260] D Swoo_3764 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Swoo_1270 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Swoo_0623 aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D Swoo_2986 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Swoo_1271 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Swoo_1272 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Swoo_1347 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Swoo_2345 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Swoo_1380 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Swoo_0447 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Swoo_1022 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Swoo_3134 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Swoo_4877 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Swoo_3889 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Swoo_2307 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Swoo_3544 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Swoo_0065 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Swoo_0064 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D Swoo_3967 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Swoo_3969 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Swoo_0321 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Swoo_3968 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Swoo_2327 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Swoo_3718 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Swoo_1196 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D Swoo_1197 Aldehyde Dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D Swoo_0864 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Swoo_1806 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Swoo_0446 threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Swoo_1908 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Swoo_2917 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Swoo_2916 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Swoo_2012 Pyridoxal-5'-phosphate-dependent protein beta subunit K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:swd00270] D Swoo_0438 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Swoo_1774 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Swoo_2550 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Swoo_2857 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Swoo_2120 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Swoo_4088 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Swoo_4458 Methionine synthase vitamin-B12 independent K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Swoo_0875 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Swoo_0588 dTDP-4-dehydrorhamnose reductase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Swoo_2058 Adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Swoo_0724 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Swoo_4916 purine or other phosphorylase family 1 K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Swoo_1217 Adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Swoo_3721 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Swoo_4855 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D Swoo_2411 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Swoo_3095 Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D Swoo_2131 putative GAF sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D Swoo_4919 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Swoo_3618 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Swoo_1941 conserved hypothetical protein K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D Swoo_3764 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Swoo_1270 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Swoo_0623 aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D Swoo_2986 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Swoo_3204 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Swoo_0622 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Swoo_3427 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Swoo_0406 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Swoo_0444 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Swoo_3326 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Swoo_2096 Glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Swoo_0914 Glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Swoo_4135 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Swoo_2308 Aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Swoo_1908 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Swoo_1002 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Swoo_0864 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Swoo_1806 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Swoo_3889 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Swoo_2307 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:swd00280] D Swoo_0406 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Swoo_0444 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Swoo_2710 Glu/Leu/Phe/Val dehydrogenase dimerisation region K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D Swoo_2278 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Swoo_2279 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Swoo_1035 Transketolase central region K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Swoo_2280 Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Swoo_0321 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Swoo_3223 acyl-CoA dehydrogenase domain protein K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D Swoo_0021 fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Swoo_3026 fatty acid oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Swoo_3027 acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Swoo_0020 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Swoo_3197 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D Swoo_1113 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Swoo_3201 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Swoo_1114 aminotransferase class-III K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D Swoo_3862 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Swoo_3226 Carbamoyl-phosphate synthase L chain ATP-binding K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D Swoo_3224 Propionyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D Swoo_3225 Enoyl-CoA hydratase/isomerase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D Swoo_3227 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Swoo_3228 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D Swoo_3229 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D Swoo_3202 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:swd00290] D Swoo_0446 threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Swoo_4548 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Swoo_4547 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Swoo_4549 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Swoo_1955 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Swoo_0442 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Swoo_1954 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Swoo_0443 amino acid-binding ACT domain protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D Swoo_0441 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Swoo_0445 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Swoo_0406 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Swoo_0444 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Swoo_2710 Glu/Leu/Phe/Val dehydrogenase dimerisation region K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D Swoo_3063 aminotransferase class I and II K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D Swoo_2267 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Swoo_4550 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:swd00300] D Swoo_3764 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Swoo_1270 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Swoo_0623 aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D Swoo_2986 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Swoo_2177 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Swoo_3579 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Swoo_3284 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D Swoo_0655 succinylornithine transaminase family K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Swoo_2188 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Swoo_0487 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Swoo_0486 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Swoo_4538 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Swoo_4537 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:swd00310] D Swoo_1838 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Swoo_0321 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Swoo_1033 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Swoo_0021 fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Swoo_3026 fatty acid oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Swoo_3202 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Swoo_1908 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Swoo_3862 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Swoo_3863 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Swoo_2344 Gamma-butyrobetaine dioxygenase K00474 TMLHE; trimethyllysine dioxygenase [EC:1.14.11.8] C 00220 Arginine biosynthesis [PATH:swd00220] D Swoo_0331 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Swoo_0332 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Swoo_0333 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Swoo_1322 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Swoo_4643 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_1130 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_2101 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_3577 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Swoo_3578 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Swoo_2140 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Swoo_2308 Aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Swoo_2267 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Swoo_4558 amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D Swoo_0330 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Swoo_0329 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Swoo_0655 succinylornithine transaminase family K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Swoo_0328 acetylornithine deacetylase (ArgE) K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:swd00330] D Swoo_1853 N-isopropylammelide isopropylaminohydrolase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Swoo_4028 5-oxoprolinase (ATP-hydrolyzing) K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D Swoo_4027 5-oxoprolinase (ATP-hydrolyzing) K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D Swoo_2057 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Swoo_2059 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Swoo_2009 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D Swoo_0724 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Swoo_2058 Adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Swoo_3441 GCN5-related N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D Swoo_4038 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Swoo_0656 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D Swoo_1802 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D Swoo_0657 succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D Swoo_2277 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D Swoo_1135 FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D Swoo_2722 FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D Swoo_1127 FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D Swoo_1115 Aldehyde Dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D Swoo_1331 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Swoo_0714 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Swoo_3599 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Swoo_3598 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Swoo_4617 Prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Swoo_2262 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Swoo_2308 Aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Swoo_2821 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] D Swoo_3726 Ornithine cyclodeaminase K19742 lhpI; 1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.49] C 00340 Histidine metabolism [PATH:swd00340] D Swoo_2092 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Swoo_2081 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Swoo_2087 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Swoo_2088 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Swoo_2082 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Swoo_2089 histidinol-phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D Swoo_4751 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Swoo_2090 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Swoo_2091 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Swoo_4602 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D Swoo_4837 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D Swoo_3913 phenylalanine/histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D Swoo_4838 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D Swoo_4840 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D Swoo_0528 Arginase/agmatinase/formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D Swoo_3912 flavocytochrome c K17363 urdA; urocanate reductase [EC:1.3.99.33] D Swoo_0827 glutamate decarboxylase K01590 hdc; histidine decarboxylase [EC:4.1.1.22] D Swoo_2444 conserved hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:swd00350] D Swoo_2308 Aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Swoo_4751 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Swoo_2090 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Swoo_2411 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Swoo_1932 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Swoo_2336 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D Swoo_1719 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D Swoo_1718 fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D Swoo_0375 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Swoo_2241 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Swoo_1359 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Swoo_2019 4-hydroxyphenylacetate 3-hydroxylase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D Swoo_0976 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D Swoo_3863 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:swd00360] D Swoo_1715 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D Swoo_0227 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Swoo_0223 thioesterase superfamily protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D Swoo_0221 phenylacetate-CoA oxygenase, PaaG subunit K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D Swoo_0220 phenylacetate-CoA oxygenase, PaaH subunit K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D Swoo_0219 phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D Swoo_0218 phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D Swoo_0217 ferredoxin K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D Swoo_0224 phenylacetate degradation, enoyl-CoA hydratase paaB K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D Swoo_0226 phenylacetic acid degradation protein paaN K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D Swoo_2308 Aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Swoo_4751 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Swoo_2090 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Swoo_2411 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Swoo_1851 GCN5-related N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D Swoo_1932 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Swoo_3905 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D Swoo_4038 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:swd00380] D Swoo_1403 tryptophan 23-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D Swoo_1402 putative esterase K01432 AFMID; arylformamidase [EC:3.5.1.9] D Swoo_1404 Kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9] D Swoo_1405 kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D Swoo_1408 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6] D Swoo_1407 Aminocarboxymuconate-semialdehyde decarboxylase K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] D Swoo_1410 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Swoo_1409 Endoribonuclease L-PSP K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5] D Swoo_1838 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Swoo_0321 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Swoo_1033 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Swoo_0021 fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Swoo_3026 fatty acid oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Swoo_3202 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Swoo_0212 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Swoo_4038 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Swoo_0229 Amidase K21801 iaaH; indoleacetamide hydrolase [EC:3.5.1.-] D Swoo_3881 Catalase K03781 katE; catalase [EC:1.11.1.6] D Swoo_3394 Catalase K03781 katE; catalase [EC:1.11.1.6] D Swoo_4923 Catalase domain protein K03781 katE; catalase [EC:1.11.1.6] D Swoo_3905 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:swd00400] D Swoo_2717 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Swoo_1258 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Swoo_0986 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Swoo_0341 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Swoo_0546 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Swoo_0047 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Swoo_0340 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Swoo_2309 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Swoo_3017 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Swoo_2912 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Swoo_2913 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Swoo_2914 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Swoo_2915 Indole-3-glycerol-phosphate synthase, Phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D Swoo_2917 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Swoo_2916 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Swoo_2012 Pyridoxal-5'-phosphate-dependent protein beta subunit K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Swoo_1259 chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D Swoo_3147 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D Swoo_1263 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Swoo_2308 Aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Swoo_4751 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Swoo_2090 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Swoo_2411 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Swoo_1715 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:swd00410] D Swoo_4739 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Swoo_3862 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Swoo_3803 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Swoo_1114 aminotransferase class-III K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D Swoo_0021 fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Swoo_3026 fatty acid oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Swoo_1113 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Swoo_3201 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:swd00430] D Swoo_4739 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Swoo_0999 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Swoo_1929 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Swoo_2485 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Swoo_2140 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Swoo_3154 protein of unknown function DUF1486 K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-] D Swoo_2887 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Swoo_2886 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:swd00450] D Swoo_0622 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Swoo_2120 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Swoo_4088 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Swoo_4458 Methionine synthase vitamin-B12 independent K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Swoo_3095 Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D Swoo_0859 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Swoo_2486 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Swoo_1687 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Swoo_1686 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Swoo_4713 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Swoo_1977 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:swd00460] D Swoo_4366 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_3058 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_1149 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_4365 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_1147 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Swoo_0212 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Swoo_0999 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Swoo_1929 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Swoo_2298 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Swoo_2686 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Swoo_1380 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:swd00470] D Swoo_4206 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Swoo_2674 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Swoo_1908 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Swoo_1322 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Swoo_4709 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Swoo_4535 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Swoo_3257 protein of unknown function DUF1611 K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312] D Swoo_3258 Mandelate racemase/muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D Swoo_0487 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Swoo_0486 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Swoo_2821 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] D Swoo_2823 proline racemase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D Swoo_2820 FAD dependent oxidoreductase K21060 lhpB; D-hydroxyproline dehydrogenase [EC:1.5.99.-] D Swoo_2822 dihydrodipicolinate synthetase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D Swoo_2824 Aldehyde Dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00480 Glutathione metabolism [PATH:swd00480] D Swoo_0999 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Swoo_1929 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Swoo_1736 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D Swoo_0008 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D Swoo_0010 Allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D Swoo_0009 urea amidolyase related protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D Swoo_3326 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Swoo_2096 Glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Swoo_0914 Glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Swoo_4135 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Swoo_3602 peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Swoo_2996 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Swoo_1076 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Swoo_3188 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Swoo_3796 PepB aminopeptidase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D Swoo_2134 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Swoo_0962 Peptidase M1 membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Swoo_3603 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Swoo_1928 dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Swoo_0907 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Swoo_0994 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Swoo_0127 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Swoo_0424 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Swoo_1972 glutathione S-transferase, N-terminal domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Swoo_3219 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Swoo_0121 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D Swoo_2702 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Swoo_3220 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Swoo_2539 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Swoo_3447 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D Swoo_0147 Redoxin domain protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D Swoo_0724 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:swd00511] D Swoo_1311 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Swoo_3941 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Swoo_0561 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00540 Lipopolysaccharide biosynthesis [PATH:swd00540] D Swoo_3269 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Swoo_4528 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Swoo_3271 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Swoo_3118 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Swoo_3268 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Swoo_1820 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Swoo_4235 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Swoo_3674 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Swoo_4236 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Swoo_2182 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Swoo_0067 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Swoo_0768 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Swoo_2069 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D Swoo_1515 conserved hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D Swoo_2532 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Swoo_0068 lipopolysaccharide kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D Swoo_0769 rfaE bifunctional protein K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D Swoo_2815 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:swd00541] D Swoo_1714 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Swoo_1713 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Swoo_0595 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Swoo_3663 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Swoo_1681 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Swoo_1683 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Swoo_1682 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Swoo_1661 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Swoo_1684 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Swoo_3151 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Swoo_4895 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Swoo_1662 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Swoo_1660 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Swoo_1680 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D Swoo_1654 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Swoo_1655 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] C 00550 Peptidoglycan biosynthesis [PATH:swd00550] D Swoo_4227 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Swoo_4707 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Swoo_4532 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Swoo_4535 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Swoo_4538 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Swoo_2674 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Swoo_4537 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Swoo_3277 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Swoo_1161 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Swoo_0532 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Swoo_4536 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Swoo_4533 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Swoo_0334 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Swoo_3792 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Swoo_3708 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Swoo_4539 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Swoo_3712 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Swoo_2324 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:swd00552] D Swoo_1161 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Swoo_0532 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Swoo_1691 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12] D Swoo_1680 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:swd00543] D Swoo_1673 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D Swoo_0438 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Swoo_1774 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:swd00730] D Swoo_2592 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Swoo_2591 phosphomethylpyrimidine kinase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D Swoo_2590 UBA/THIF-type NAD/FAD binding protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D Swoo_1776 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Swoo_0566 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Swoo_3473 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Swoo_2587 thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Swoo_3478 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Swoo_2588 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10] D Swoo_1387 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Swoo_4179 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Swoo_1350 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_4136 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_1207 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_1349 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_1798 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:swd00740] D Swoo_3046 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Swoo_1384 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Swoo_1382 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Swoo_0490 HAD-superfamily hydrolase, subfamily IA, variant 1 K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D Swoo_4764 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D Swoo_1385 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Swoo_1383 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Swoo_2495 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Swoo_1290 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Swoo_4445 oxidoreductase FAD/NAD(P)-binding domain protein K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D Swoo_1863 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D Swoo_4194 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Swoo_2704 NUDIX hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-] D Swoo_3819 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:swd00750] D Swoo_2060 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Swoo_4637 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D Swoo_0877 D-erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D Swoo_2987 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D Swoo_2307 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Swoo_1015 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D Swoo_1246 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D Swoo_1272 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:swd00760] D Swoo_1236 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Swoo_2281 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Swoo_0315 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Swoo_3546 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Swoo_3422 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Swoo_3884 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Swoo_1539 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Swoo_1952 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Swoo_1951 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Swoo_3345 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Swoo_2746 HAD-superfamily hydrolase, subfamily IIA K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Swoo_3705 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Swoo_3352 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Swoo_2791 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Swoo_0325 competence/damage-inducible protein CinA K03742 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D Swoo_1843 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Swoo_3480 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Swoo_2831 NAD(P) transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Swoo_2830 NAD(P)(+) transhydrogenase (AB-specific) K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D Swoo_0109 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D Swoo_3863 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:swd00770] D Swoo_1955 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Swoo_0442 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Swoo_1954 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Swoo_0443 amino acid-binding ACT domain protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D Swoo_0441 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Swoo_0445 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Swoo_3802 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Swoo_3648 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Swoo_3803 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Swoo_4705 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D Swoo_4562 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Swoo_3352 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Swoo_0076 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Swoo_0302 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Swoo_1247 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Swoo_3304 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Swoo_1753 protein of unknown function DUF479 K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D Swoo_0406 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Swoo_0444 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Swoo_3135 Pyridoxal-dependent decarboxylase K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:swd00780] D Swoo_1868 Methyltransferase type 11 K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Swoo_3008 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Swoo_4609 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Swoo_4612 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Swoo_2044 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Swoo_2042 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Swoo_4611 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Swoo_3196 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Swoo_3270 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Swoo_0156 bioH protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D Swoo_1867 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Swoo_1865 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Swoo_1869 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Swoo_1866 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D Swoo_4706 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:swd00785] D Swoo_3714 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Swoo_3715 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Swoo_0321 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Swoo_0319 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Swoo_0320 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Swoo_1837 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Swoo_1838 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Swoo_2278 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Swoo_2279 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Swoo_1035 Transketolase central region K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Swoo_2280 Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Swoo_3967 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Swoo_3969 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Swoo_3968 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:swd00790] D Swoo_4566 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Swoo_1350 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_4136 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_1207 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_1349 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_0959 Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Swoo_1159 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Swoo_3801 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Swoo_1160 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Swoo_3567 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Swoo_1009 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Swoo_2983 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Swoo_3046 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Swoo_1384 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Swoo_4160 glutamine amidotransferase of anthranilate synthase K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D Swoo_2226 para-aminobenzoate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D Swoo_1980 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D Swoo_2892 dihydroneopterin aldolase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D Swoo_0378 short-chain dehydrogenase/reductase SDR K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D Swoo_1716 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Swoo_1715 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D Swoo_2551 radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Swoo_2552 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Swoo_3300 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Swoo_1375 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D Swoo_4793 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Swoo_0082 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Swoo_4791 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Swoo_4789 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Swoo_4871 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Swoo_4792 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Swoo_0083 molybdopterin-guanine dinucleotide biosynthesis protein B K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Swoo_4769 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Swoo_2951 isoquinoline 1-oxidoreductase maturation factor K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D Swoo_0084 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:swd00670] D Swoo_1009 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Swoo_0378 short-chain dehydrogenase/reductase SDR K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D Swoo_4339 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Swoo_3115 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Swoo_1380 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Swoo_2745 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Swoo_0296 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Swoo_0037 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Swoo_3969 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Swoo_4088 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Swoo_1230 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Swoo_3286 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D Swoo_0624 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Swoo_3984 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:swd00860] D Swoo_1728 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Swoo_3686 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Swoo_1171 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Swoo_0518 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Swoo_0483 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Swoo_0482 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Swoo_0287 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Swoo_0045 Coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D Swoo_0053 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D Swoo_0025 Protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Swoo_0793 protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Swoo_0027 Protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Swoo_1335 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D Swoo_0481 protein of unknown function DUF513 hemX K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Swoo_1872 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Swoo_0787 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Swoo_1762 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Swoo_0170 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Swoo_0429 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Swoo_0171 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Swoo_4080 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Swoo_4081 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Swoo_1216 cobalamin biosynthesis protein CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Swoo_4082 cobalbumin biosynthesis protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Swoo_4083 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Swoo_4084 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Swoo_4087 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Swoo_4002 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D Swoo_3608 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D Swoo_3607 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:swd00130] D Swoo_4826 Chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D Swoo_4497 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Swoo_4444 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D Swoo_3819 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Swoo_3970 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D Swoo_2305 ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D Swoo_4911 ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D Swoo_3972 2-polyprenyl-6-methoxyphenol 4-hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D Swoo_0527 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Swoo_3694 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D Swoo_0093 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D Swoo_0209 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D Swoo_0208 alpha/beta hydrolase fold K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D Swoo_0207 Mandelate racemase/muconate lactonizing protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D Swoo_0206 O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D Swoo_4886 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D Swoo_3883 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D Swoo_3212 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Swoo_1932 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:swd00900] D Swoo_3478 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Swoo_3275 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Swoo_3348 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Swoo_3688 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Swoo_3347 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Swoo_1544 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Swoo_1294 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Swoo_3202 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Swoo_3819 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Swoo_3477 Polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Swoo_1003 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Swoo_3277 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:swd00907] D Swoo_0021 fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Swoo_3026 fatty acid oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Swoo_3227 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Swoo_3027 acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Swoo_0020 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Swoo_0876 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics D Swoo_1678 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4 C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products D Swoo_1827 beta-lactamase domain protein K05555 actIV; cyclase [EC:4.-.-.-] C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:swd00523] D Swoo_1681 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Swoo_1683 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Swoo_1682 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Swoo_1661 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Swoo_1684 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D Swoo_0093 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D Swoo_1683 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:swd00946] D Swoo_4366 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_3058 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_1149 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_4365 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_1147 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D Swoo_3361 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:swd00332] D Swoo_3599 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Swoo_3598 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:swd00261] D Swoo_1687 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Swoo_1686 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Swoo_3764 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Swoo_1270 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Swoo_0623 aspartate kinase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D Swoo_2986 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Swoo_2177 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Swoo_3579 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:swd00521] D Swoo_0562 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Swoo_2275 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Swoo_1772 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Swoo_1681 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Swoo_1683 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Swoo_1682 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Swoo_1661 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Swoo_1684 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Swoo_0562 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:swd00525] D Swoo_1681 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Swoo_1683 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:swd00401] D Swoo_1259 chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D Swoo_2308 Aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Swoo_4751 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Swoo_2090 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Swoo_2411 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis D Swoo_1140 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Swoo_3937 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Swoo_2208 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Swoo_1306 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Swoo_3936 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Swoo_3938 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Swoo_1143 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D Swoo_3837 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] C 00405 Phenazine biosynthesis D Swoo_2912 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Swoo_2913 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Swoo_2041 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Swoo_2042 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Swoo_4611 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Swoo_3196 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Swoo_1666 phosphopantetheine-binding K02078 acpP; acyl carrier protein D Swoo_4597 phosphopantetheine-binding K02078 acpP; acyl carrier protein D Swoo_2043 acyl carrier protein K02078 acpP; acyl carrier protein D Swoo_4596 conserved hypothetical protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:swd00999] D Swoo_0875 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Swoo_0588 dTDP-4-dehydrorhamnose reductase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Swoo_0047 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Swoo_4366 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_3058 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_1149 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_4365 glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Swoo_1147 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites [PATH:swd00997] D Swoo_0586 L-lysine 6-monooxygenase (NADPH) K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59] D Swoo_2658 IucA/IucC family protein K03895 iucC; aerobactin synthase [EC:6.3.2.39] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:swd00362] D Swoo_3027 acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Swoo_0020 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Swoo_0222 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D Swoo_1392 4-oxalocrotonate decarboxylase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D Swoo_1390 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Swoo_1391 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Swoo_1410 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Swoo_1406 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D Swoo_4049 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D Swoo_3026 fatty acid oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Swoo_0021 fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Swoo_0214 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Swoo_1741 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Swoo_3335 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Swoo_1033 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Swoo_3202 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:swd00627] D Swoo_4038 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Swoo_0212 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Swoo_1809 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Swoo_3819 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:swd00364] D Swoo_0924 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:swd00625] D Swoo_1359 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Swoo_0375 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Swoo_2241 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Swoo_2255 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:swd00361] D Swoo_0924 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:swd00623] D Swoo_0924 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:swd00622] D Swoo_1410 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Swoo_1406 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D Swoo_1392 4-oxalocrotonate decarboxylase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D Swoo_1390 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Swoo_1391 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] C 00633 Nitrotoluene degradation [PATH:swd00633] D Swoo_0593 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D Swoo_4055 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D Swoo_3027 acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Swoo_0020 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:swd00643] D Swoo_2336 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D Swoo_1719 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D Swoo_1718 fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D Swoo_4038 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Swoo_0212 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:swd00930] D Swoo_3940 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D Swoo_0021 fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Swoo_3026 fatty acid oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:swd00621] D Swoo_1406 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D Swoo_1392 4-oxalocrotonate decarboxylase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D Swoo_1390 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Swoo_1391 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] C 00626 Naphthalene degradation [PATH:swd00626] D Swoo_1359 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D Swoo_0375 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Swoo_2241 iron-containing alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:swd03020] D Swoo_4697 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Swoo_4696 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Swoo_4665 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Swoo_4582 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:swd03010] D Swoo_2311 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Swoo_3281 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Swoo_4684 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Swoo_4666 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Swoo_4673 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Swoo_4212 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Swoo_4694 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Swoo_4676 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Swoo_4221 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Swoo_4691 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Swoo_4667 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Swoo_4695 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Swoo_4668 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Swoo_4677 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Swoo_3558 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Swoo_1254 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Swoo_4681 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Swoo_4210 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Swoo_4686 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Swoo_1288 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Swoo_1156 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Swoo_4700 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Swoo_4687 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Swoo_4690 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Swoo_4689 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Swoo_4678 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Swoo_4675 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Swoo_4698 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Swoo_4209 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Swoo_4699 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Swoo_4701 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Swoo_4222 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Swoo_4680 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Swoo_4671 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Swoo_4683 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Swoo_4664 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Swoo_4674 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Swoo_1257 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Swoo_2488 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Swoo_1004 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Swoo_4685 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Swoo_4688 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Swoo_4679 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Swoo_2155 ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Swoo_1005 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Swoo_4560 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Swoo_4682 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Swoo_4672 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Swoo_4424 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Swoo_2038 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Swoo_4559 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Swoo_4932 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Swoo_2489 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Swoo_4669 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Swoo_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0132 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0099 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0153 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0143 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0161 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0165 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0142 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0147 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0152 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0158 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0131 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0096 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0164 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0144 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0141 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0151 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0130 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0163 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0095 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0157 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0146 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:swd00970] D Swoo_R0097 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Swoo_R0159 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Swoo_R0148 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Swoo_R0035 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Swoo_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Swoo_R0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0025 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0102 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0107 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0112 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0109 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0108 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0113 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0114 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0115 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0074 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0075 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0077 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0073 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0081 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0078 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0079 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0076 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0080 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0004 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Swoo_R0162 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Swoo_R0083 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Swoo_R0094 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Swoo_R0082 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Swoo_R0051 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Swoo_R0053 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Swoo_R0057 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Swoo_R0119 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Swoo_R0121 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Swoo_R0126 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Swoo_R0123 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Swoo_R0036 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0040 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0038 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0039 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0044 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0041 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0042 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0045 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0046 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0037 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0136 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0138 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0137 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0056 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0139 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0154 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0015 tRNA-His K14226 tRNA-His; tRNA His D Swoo_R0101 tRNA-His K14226 tRNA-His; tRNA His D Swoo_R0098 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Swoo_R0149 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Swoo_R0160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Swoo_R0135 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0122 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0120 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0127 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0124 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0052 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0058 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0118 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0084 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0091 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0085 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0089 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0086 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0088 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0092 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0090 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0087 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0125 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0128 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0018 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0061 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0062 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0063 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0064 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0065 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0067 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0117 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0020 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Swoo_R0023 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Swoo_R0133 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Swoo_R0016 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Swoo_R0017 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Swoo_R0103 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Swoo_R0093 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Swoo_R0106 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0116 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0111 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0048 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0049 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0140 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0059 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0145 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Swoo_R0019 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Swoo_R0022 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Swoo_R0156 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Swoo_R0129 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Swoo_R0069 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Swoo_R0070 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Swoo_R0071 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Swoo_R0155 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Swoo_R0072 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Swoo_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0027 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0028 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0029 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0033 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0034 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0031 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0032 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0030 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0060 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0066 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0068 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_1728 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Swoo_3121 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Swoo_3339 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Swoo_2575 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Swoo_2223 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Swoo_0013 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Swoo_0012 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Swoo_2491 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Swoo_2479 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Swoo_3116 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Swoo_1977 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Swoo_0037 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Swoo_1059 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Swoo_3702 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Swoo_1291 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Swoo_0940 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Swoo_4427 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Swoo_3251 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Swoo_1545 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Swoo_2066 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Swoo_2067 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Swoo_1212 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Swoo_0348 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:swd03060] D Swoo_4670 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Swoo_4703 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Swoo_3564 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Swoo_1758 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Swoo_3572 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Swoo_1759 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Swoo_3571 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Swoo_1757 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Swoo_4929 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Swoo_4525 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Swoo_4875 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Swoo_1253 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Swoo_R0100 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Swoo_0201 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Swoo_0524 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Swoo_0523 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB D Swoo_0522 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Swoo_0360 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Swoo_1242 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Swoo_1292 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:swd04122] D Swoo_1776 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Swoo_0566 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Swoo_0017 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Swoo_2170 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Swoo_2476 sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B D Swoo_2475 sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C D Swoo_2474 sulfur relay protein TusD/DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Swoo_2477 sulfur relay protein, TusE/DsrC/DsvC family K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Swoo_2705 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Swoo_4789 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Swoo_4793 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Swoo_0082 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Swoo_4790 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein D Swoo_4770 molybdopterin synthase sulfurylase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Swoo_4791 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Swoo_4871 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Swoo_4792 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Swoo_3473 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Swoo_2589 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Swoo_2590 UBA/THIF-type NAD/FAD binding protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:swd03018] D Swoo_1227 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Swoo_2032 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D Swoo_0514 DEAD/DEAH box helicase domain protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Swoo_3350 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Swoo_3556 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Swoo_0703 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Swoo_1745 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Swoo_2205 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Swoo_3506 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Swoo_3529 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Swoo_1095 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Swoo_4217 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Swoo_0636 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Swoo_4552 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Swoo_2292 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Swoo_0512 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Swoo_3583 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Swoo_4308 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Swoo_4170 RNA chaperone Hfq K03666 hfq; host factor-I protein D Swoo_3800 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:swd03030] D Swoo_2607 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_2197 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_2834 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_3266 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Swoo_1793 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Swoo_1983 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Swoo_3704 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Swoo_1060 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Swoo_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Swoo_4207 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Swoo_1154 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Swoo_0640 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Swoo_2608 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Swoo_3186 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Swoo_3267 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Swoo_0060 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Swoo_2847 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:swd03410] D Swoo_2562 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Swoo_3988 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Swoo_1319 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Swoo_0078 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Swoo_1743 transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Swoo_0014 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Swoo_2927 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Swoo_1274 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Swoo_0060 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Swoo_0897 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Swoo_2847 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:swd03420] D Swoo_1811 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Swoo_0638 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Swoo_2026 ABC transporter related K03701 uvrA; excinuclease ABC subunit A D Swoo_2554 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Swoo_2151 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Swoo_4498 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Swoo_0596 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Swoo_0060 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Swoo_2847 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:swd03430] D Swoo_3341 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Swoo_4172 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Swoo_1226 DNA mismatch repair endonuclease mutH K03573 mutH; DNA mismatch repair protein MutH D Swoo_4498 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Swoo_0596 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Swoo_2049 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Swoo_1558 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Swoo_3476 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Swoo_0897 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Swoo_0640 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Swoo_3266 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Swoo_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Swoo_1793 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Swoo_3704 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Swoo_1983 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Swoo_2607 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_2197 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_2834 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_1060 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Swoo_2847 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Swoo_0343 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:swd03440] D Swoo_0897 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Swoo_0640 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Swoo_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Swoo_1245 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Swoo_1795 recombination protein RecR K06187 recR; recombination protein RecR D Swoo_3340 recA protein K03553 recA; recombination protein RecA D Swoo_0060 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Swoo_2572 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Swoo_2571 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Swoo_2573 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Swoo_4592 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Swoo_2642 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Swoo_2641 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Swoo_2643 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Swoo_0306 AAA ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Swoo_3266 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Swoo_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Swoo_1793 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Swoo_3704 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Swoo_1983 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Swoo_2607 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_2197 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_2834 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_1060 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Swoo_4426 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Swoo_4211 single-strand binding protein/Primosomal replication protein n K02686 priB; primosomal replication protein N D Swoo_3088 primosomal replication protein N'', putative K04067 priC; primosomal replication protein N'' C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:swd03250] D Swoo_3642 peptidyl-prolyl cis-trans isomerase cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Swoo_0957 peptidyl-prolyl cis-trans isomerase cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus D Swoo_3021 peptidase M16 domain protein K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:swd02010] D Swoo_0087 extracellular solute-binding protein, family 1 K05772 tupA; tungstate transport system substrate-binding protein D Swoo_0086 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein D Swoo_0085 ABC transporter related K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Swoo_4788 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Swoo_4247 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Swoo_4787 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Swoo_4786 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Swoo_0996 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Swoo_0997 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Swoo_0998 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Swoo_1131 extracellular solute-binding protein family 1 K11073 potF; putrescine transport system substrate-binding protein D Swoo_1134 Ornithine carbamoyltransferase K11074 potI; putrescine transport system permease protein D Swoo_1133 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein D Swoo_1132 spermidine/putrescine ABC transporter ATPase subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D Swoo_1845 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D Swoo_1846 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein D Swoo_1847 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Swoo_4230 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein D Swoo_4231 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Swoo_4232 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Swoo_4229 anti-sigma-factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein D Swoo_4233 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Swoo_3450 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Swoo_3168 binding-protein-dependent transport systems inner membrane component K02037 pstC; phosphate transport system permease protein D Swoo_3167 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Swoo_3166 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Swoo_2803 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D Swoo_2801 binding-protein-dependent transport systems inner membrane component K02042 phnE; phosphonate transport system permease protein D Swoo_2802 ABC transporter related K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Swoo_4040 regulatory protein K11959 urtA; urea transport system substrate-binding protein D Swoo_3102 extracellular solute-binding protein family 5 K19226 sapA; cationic peptide transport system substrate-binding protein D Swoo_3103 binding-protein-dependent transport systems inner membrane component K19227 sapB; cationic peptide transport system permease protein D Swoo_3104 binding-protein-dependent transport systems inner membrane component K19228 sapC; cationic peptide transport system permease protein D Swoo_3105 oligopeptide/dipeptide ABC transporter, ATPase subunit K19229 sapD; cationic peptide transport system ATP-binding protein D Swoo_3106 ABC transporter related K19230 sapF; cationic peptide transport system ATP-binding protein D Swoo_4079 periplasmic binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D Swoo_0096 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Swoo_4866 ABC-2 type transporter K09696 natB; sodium transport system permease protein D Swoo_4865 ABC transporter related K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Swoo_1813 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Swoo_1815 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Swoo_1814 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Swoo_4662 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D Swoo_4661 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D Swoo_4660 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D Swoo_4659 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Swoo_1077 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D Swoo_1078 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Swoo_4239 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Swoo_4447 copper ABC transporter, permease protein K19341 nosY; Cu-processing system permease protein D Swoo_4468 copper ABC transporter, permease protein K19341 nosY; Cu-processing system permease protein D Swoo_4469 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein D Swoo_4448 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein D Swoo_0203 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Swoo_0202 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Swoo_1819 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Swoo_3807 ABC transporter related K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Swoo_0988 ABC transporter related K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D Swoo_1742 ABC transporter related K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D Swoo_0476 type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Swoo_0711 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Swoo_0710 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:swd02060] D Swoo_2191 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Swoo_2192 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Swoo_2190 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Swoo_3287 phosphotransferase system EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D Swoo_1228 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D Swoo_4244 Phosphotransferase system, phosphocarrier protein HPr K08485 ptsO; phosphocarrier protein NPr D Swoo_4242 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:swd03070] D Swoo_4195 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Swoo_4734 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D Swoo_4735 general secretion pathway protein C K02452 gspC; general secretion pathway protein C D Swoo_4732 general secretion pathway protein F K02455 gspF; general secretion pathway protein F D Swoo_4731 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Swoo_4730 general secretion pathway protein H K02457 gspH; general secretion pathway protein H D Swoo_4729 general secretion pathway protein I K02458 gspI; general secretion pathway protein I D Swoo_4728 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J D Swoo_4727 General secretion pathway protein K K02460 gspK; general secretion pathway protein K D Swoo_4726 general secretion pathway protein L K02461 gspL; general secretion pathway protein L D Swoo_4725 General secretion pathway M protein K02462 gspM; general secretion pathway protein M D Swoo_4733 general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Swoo_1758 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Swoo_3572 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Swoo_1759 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Swoo_3571 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Swoo_4703 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Swoo_3564 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Swoo_4670 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Swoo_1757 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Swoo_4929 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Swoo_4525 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Swoo_0201 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Swoo_4875 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Swoo_1253 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Swoo_0524 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Swoo_0523 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB D Swoo_0522 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Swoo_2513 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D Swoo_2514 type VI secretion system effector, Hcp1 family K11903 hcp; type VI secretion system secreted protein Hcp D Swoo_2523 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD D Swoo_2516 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D Swoo_2521 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK D Swoo_2520 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:swd02020] D Swoo_3451 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Swoo_3452 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Swoo_1350 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_4136 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_1207 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_1349 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_0959 Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Swoo_3450 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Swoo_3381 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Swoo_2805 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Swoo_2804 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Swoo_3380 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Swoo_0149 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Swoo_0150 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Swoo_0280 integral membrane sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Swoo_0281 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Swoo_2294 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Swoo_3963 integral membrane sensor signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D Swoo_3962 two component transcriptional regulator, winged helix family K07664 baeR; two-component system, OmpR family, response regulator BaeR D Swoo_0891 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D Swoo_0190 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Swoo_0189 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D Swoo_1608 flagellin domain protein K02406 fliC; flagellin D Swoo_1609 flagellin domain protein K02406 fliC; flagellin D Swoo_2216 flagellin domain protein K02406 fliC; flagellin D Swoo_1635 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Swoo_3475 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Swoo_3532 multi-sensor hybrid histidine kinase K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3] D Swoo_3534 two component transcriptional regulator, winged helix family K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D Swoo_3525 trimethylamine-N-oxide reductase c-type cytochrome TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D Swoo_3526 trimethylamine-N-oxide reductase TorA K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D Swoo_3527 cytoplasmic chaperone TorD family protein K03533 torD; TorA specific chaperone D Swoo_3762 two component transcriptional regulator, winged helix family K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D Swoo_0171 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Swoo_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Swoo_3977 integral membrane sensor signal transduction histidine kinase K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D Swoo_3919 integral membrane sensor signal transduction histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D Swoo_3920 two component transcriptional regulator, winged helix family K19610 pfeR; two-component system, OmpR family, response regulator PfeR D Swoo_0902 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Swoo_4865 ABC transporter related K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Swoo_4866 ABC-2 type transporter K09696 natB; sodium transport system permease protein D Swoo_2636 integral membrane sensor signal transduction histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Swoo_2637 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Swoo_3747 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Swoo_0971 integral membrane sensor signal transduction histidine kinase K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D Swoo_0970 two component transcriptional regulator, LuxR family K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D Swoo_2634 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D Swoo_2633 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D Swoo_2631 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D Swoo_2632 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D Swoo_3240 lipoprotein, putative K06080 rcsF; RcsF protein D Swoo_3355 multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Swoo_2150 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Swoo_2997 transcriptional regulator, LuxR family K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D Swoo_3338 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Swoo_2118 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D Swoo_4590 integral membrane sensor signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D Swoo_4591 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR D Swoo_0602 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA D Swoo_0750 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D Swoo_0604 conserved hypothetical protein K02279 cpaB; pilus assembly protein CpaB D Swoo_0749 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D Swoo_0605 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D Swoo_0607 conserved hypothetical protein K02282 cpaE; pilus assembly protein CpaE D Swoo_0608 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Swoo_0748 FHA domain containing protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Swoo_0609 type II secretion system protein K12510 tadB; tight adherence protein B D Swoo_0747 type II secretion system protein K12510 tadB; tight adherence protein B D Swoo_0610 type II secretion system protein K12511 tadC; tight adherence protein C D Swoo_0746 type II secretion system protein K12511 tadC; tight adherence protein C D Swoo_3942 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D Swoo_3283 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D Swoo_1303 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Swoo_4650 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Swoo_4651 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Swoo_4643 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_1130 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_2101 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_3778 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D Swoo_3202 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Swoo_1723 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D Swoo_1722 two component, sigma54 specific, transcriptional regulator, Fis family K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D Swoo_4240 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Swoo_0314 General secretion pathway protein K02650 pilA; type IV pilus assembly protein PilA D Swoo_0163 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Swoo_1962 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Swoo_1596 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Swoo_2617 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_4795 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_2814 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_1568 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_2794 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_3958 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0164 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0808 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0252 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0559 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0712 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0732 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_1011 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_1310 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_2194 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_2947 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_3399 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_3576 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_3725 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_4441 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_4186 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D Swoo_3519 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D Swoo_1642 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Swoo_1643 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Swoo_0165 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Swoo_0166 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Swoo_1638 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Swoo_1636 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_0167 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_4352 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_3051 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_0162 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Swoo_1963 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Swoo_1639 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Swoo_4442 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_1595 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_1944 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_1747 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_3633 Long-chain-fatty-acyl-CoA reductase K03400 luxC; long-chain-fatty-acyl-CoA reductase [EC:1.2.1.50] D Swoo_3634 acyl transferase K15853 luxD; acyl transferase [EC:2.3.1.-] D Swoo_3635 Alkanal monooxygenase (FMN-linked) K00494 luxA; alkanal monooxygenase alpha chain [EC:1.14.14.3] D Swoo_3636 Alkanal monooxygenase (FMN-linked) K15854 luxB; alkanal monooxygenase beta chain [EC:1.14.14.3] D Swoo_3637 Long-chain-fatty-acid--luciferin-component ligase K06046 luxE; long-chain-fatty-acid---luciferin-component ligase [EC:6.2.1.19] D Swoo_1726 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP D Swoo_1725 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D Swoo_1724 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Swoo_1735 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Swoo_1614 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Swoo_1615 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Swoo_1616 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC D Swoo_0662 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Swoo_4557 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Swoo_1322 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Swoo_0589 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Swoo_0590 two component transcriptional regulator, Fis family K15012 regA; two-component system, response regulator RegA D Swoo_4166 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Swoo_4165 Cytochrome b/b6 domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Swoo_4164 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Swoo_2425 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Swoo_2424 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Swoo_2423 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D Swoo_2422 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Swoo_1565 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Swoo_1566 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Swoo_1567 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D Swoo_4195 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Swoo_1651 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Swoo_2028 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D Swoo_1662 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Swoo_3834 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor D Swoo_0701 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor D Swoo_2833 histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Swoo_2246 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D Swoo_1593 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D Swoo_4166 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:swd02024] D Swoo_3618 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Swoo_4170 RNA chaperone Hfq K03666 hfq; host factor-I protein D Swoo_3635 Alkanal monooxygenase (FMN-linked) K00494 luxA; alkanal monooxygenase alpha chain [EC:1.14.14.3] D Swoo_3636 Alkanal monooxygenase (FMN-linked) K15854 luxB; alkanal monooxygenase beta chain [EC:1.14.14.3] D Swoo_3633 Long-chain-fatty-acyl-CoA reductase K03400 luxC; long-chain-fatty-acyl-CoA reductase [EC:1.2.1.50] D Swoo_3634 acyl transferase K15853 luxD; acyl transferase [EC:2.3.1.-] D Swoo_3637 Long-chain-fatty-acid--luciferin-component ligase K06046 luxE; long-chain-fatty-acid---luciferin-component ligase [EC:6.2.1.19] D Swoo_3638 oxidoreductase FAD/NAD(P)-binding domain protein K20256 luxG; flavin reductase [EC:1.-.-.-] D Swoo_2912 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Swoo_2913 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Swoo_2717 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Swoo_1258 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Swoo_0986 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Swoo_2997 transcriptional regulator, LuxR family K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D Swoo_4739 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Swoo_3745 carbohydrate kinase FGGY K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189] D Swoo_3366 spermidine/putrescine-binding periplasmic protein-like protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Swoo_0479 outer membrane adhesin like proteiin K20276 bapA; large repetitive protein D Swoo_2110 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_3995 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2941 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2409 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_4860 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2322 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_4587 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_0662 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Swoo_4557 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Swoo_3046 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Swoo_1382 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Swoo_4929 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Swoo_3041 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_2373 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_3396 Endonuclease I K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_4623 peptidase domain protein K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_4648 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_4703 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Swoo_3564 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Swoo_4670 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Swoo_1757 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Swoo_4525 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Swoo_0201 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Swoo_4875 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Swoo_1253 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:swd02030] D Swoo_2617 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_4795 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_2814 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_1568 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_2794 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_3958 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0164 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0808 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0252 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0559 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0712 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0732 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_1011 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_1310 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_2194 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_2947 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_3399 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_3576 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_3725 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_4441 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_4186 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D Swoo_3519 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D Swoo_0166 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Swoo_1638 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Swoo_1642 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Swoo_1643 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Swoo_0165 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Swoo_1636 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_0167 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_4352 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_3051 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_1637 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ D Swoo_4204 CheC domain protein K03409 cheX; chemotaxis protein CheX D Swoo_0162 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Swoo_1963 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Swoo_1639 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Swoo_4442 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_1595 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_1944 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_1747 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_4342 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Swoo_0163 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Swoo_1962 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Swoo_1596 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Swoo_1619 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Swoo_1625 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Swoo_1626 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Swoo_3475 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Swoo_3474 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:swd02040] D Swoo_1617 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Swoo_1618 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Swoo_1619 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Swoo_1620 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Swoo_1621 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Swoo_1622 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Swoo_1623 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Swoo_4825 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Swoo_1624 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Swoo_1625 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Swoo_1626 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Swoo_1627 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D Swoo_1628 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Swoo_1629 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Swoo_1630 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Swoo_1632 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Swoo_1631 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Swoo_1594 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Swoo_1597 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Swoo_1598 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Swoo_1599 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Swoo_1600 flagellar basal body FlaE domain protein K02390 flgE; flagellar hook protein FlgE D Swoo_1601 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D Swoo_1602 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Swoo_1603 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Swoo_1604 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Swoo_1605 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D Swoo_1606 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Swoo_1607 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Swoo_1591 protein of unknown function DUF400 K09860 flgP; outer membrane protein FlgP D Swoo_4218 Sel1 domain protein repeat-containing protein K21217 motX; sodium-type polar flagellar protein MotX D Swoo_2738 OmpA/MotB domain protein K21218 motY; sodium-type flagellar protein MotY D Swoo_1608 flagellin domain protein K02406 fliC; flagellin D Swoo_1609 flagellin domain protein K02406 fliC; flagellin D Swoo_2216 flagellin domain protein K02406 fliC; flagellin D Swoo_1611 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2 D Swoo_1613 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Swoo_3475 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Swoo_3474 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Swoo_1593 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Swoo_1592 FlgN family protein K02399 flgN; flagellar biosynthesis protein FlgN D Swoo_1153 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Swoo_1614 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Swoo_4240 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Swoo_1616 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC D Swoo_1635 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Swoo_3350 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D Swoo_4088 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:swd01501] D Swoo_3644 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Swoo_1807 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Swoo_2118 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D Swoo_3738 TonB family protein K02172 blaR1; bla regulator protein blaR1 D Swoo_3737 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Swoo_3977 integral membrane sensor signal transduction histidine kinase K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D Swoo_3903 release factor H-coupled RctB family protein K18148 rtcB; release factor H-coupled RctB family protein D Swoo_0467 transcriptional regulator, TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D Swoo_0131 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1356 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_2179 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_0466 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1830 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1365 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_0132 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump D Swoo_2180 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Swoo_0465 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Swoo_1357 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump D Swoo_4195 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Swoo_0334 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Swoo_3708 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Swoo_4539 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Swoo_3595 Beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:swd01502] D Swoo_2674 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Swoo_4206 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Swoo_4537 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Swoo_4536 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Swoo_4533 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:swd01503] D Swoo_3381 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Swoo_2805 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Swoo_2804 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Swoo_3380 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Swoo_3977 integral membrane sensor signal transduction histidine kinase K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D Swoo_2532 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Swoo_3102 extracellular solute-binding protein family 5 K19226 sapA; cationic peptide transport system substrate-binding protein D Swoo_3103 binding-protein-dependent transport systems inner membrane component K19227 sapB; cationic peptide transport system permease protein D Swoo_3104 binding-protein-dependent transport systems inner membrane component K19228 sapC; cationic peptide transport system permease protein D Swoo_3105 oligopeptide/dipeptide ABC transporter, ATPase subunit K19229 sapD; cationic peptide transport system ATP-binding protein D Swoo_3106 ABC transporter related K19230 sapF; cationic peptide transport system ATP-binding protein D Swoo_0280 integral membrane sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Swoo_0281 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Swoo_2294 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Swoo_4173 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Swoo_0400 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Swoo_2842 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Swoo_3642 peptidyl-prolyl cis-trans isomerase cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Swoo_0957 peptidyl-prolyl cis-trans isomerase cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Swoo_0131 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1356 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_2179 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_0466 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1830 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1365 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_0132 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump D Swoo_2180 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Swoo_0465 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Swoo_1357 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump D Swoo_4195 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Swoo_3269 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:swd01000] C 01001 Protein kinases [BR:swd01001] D Swoo_0781 protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Swoo_1858 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Swoo_4571 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Swoo_0495 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Swoo_0497 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Swoo_4573 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Swoo_1701 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Swoo_3451 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Swoo_3381 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Swoo_2805 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Swoo_0149 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Swoo_0280 integral membrane sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Swoo_3963 integral membrane sensor signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D Swoo_3532 multi-sensor hybrid histidine kinase K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3] D Swoo_3977 integral membrane sensor signal transduction histidine kinase K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D Swoo_3919 integral membrane sensor signal transduction histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D Swoo_1029 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Swoo_2636 integral membrane sensor signal transduction histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Swoo_0971 integral membrane sensor signal transduction histidine kinase K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D Swoo_3355 multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Swoo_4590 integral membrane sensor signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D Swoo_3748 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D Swoo_1766 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Swoo_4381 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Swoo_4650 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Swoo_1723 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D Swoo_0089 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Swoo_0166 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Swoo_1638 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Swoo_1615 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Swoo_0589 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Swoo_2833 histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Swoo_2246 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D Swoo_2664 putative PAS/PAC sensor protein K19694 chiS; two-component system, sensor histidine kinase ChiS D Swoo_1704 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Swoo_0829 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Swoo_2979 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Swoo_4322 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Swoo_3314 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:swd01009] D Swoo_3410 conserved hypothetical protein K17550 PPP1R7; protein phosphatase 1 regulatory subunit 7 D Swoo_1796 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Swoo_3544 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:swd01002] D Swoo_1292 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Swoo_0303 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Swoo_0603 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Swoo_1560 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Swoo_1129 peptidase C26 K07010 K07010; putative glutamine amidotransferase D Swoo_3807 ABC transporter related K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Swoo_4872 NLP/P60 protein K13695 nlpC; probable lipoprotein NlpC D Swoo_2980 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Swoo_1221 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Swoo_4892 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Swoo_2749 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Swoo_2968 ThiJ/PfpI domain protein K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D Swoo_2365 Choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D Swoo_2125 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D Swoo_1163 ErfK/YbiS/YcfS/YnhG family protein K19235 ybiS; L,D-transpeptidase YbiS D Swoo_2153 Peptidoglycan-binding domain 1 protein K21470 ycbB; L,D-transpeptidase YcbB D Swoo_3448 Peptidase M1 membrane alanine aminopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] D Swoo_2134 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Swoo_0962 Peptidase M1 membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Swoo_2544 Peptidyl-dipeptidase A K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D Swoo_0124 Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D Swoo_1927 Peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D Swoo_0557 peptidase M4 thermolysin K08604 hap; vibriolysin [EC:3.4.24.25] D Swoo_3129 peptidase M4 thermolysin K08604 hap; vibriolysin [EC:3.4.24.25] D Swoo_4827 M6 family metalloprotease domain protein K09607 ina; immune inhibitor A [EC:3.4.24.-] D Swoo_0042 Microbial collagenase K01387 colA; microbial collagenase [EC:3.4.24.3] D Swoo_0648 Microbial collagenase K01387 colA; microbial collagenase [EC:3.4.24.3] D Swoo_3909 Endothelin-converting enzyme 1 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D Swoo_0911 Endothelin-converting enzyme 1 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D Swoo_0324 Endothelin-converting enzyme 1 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D Swoo_2953 peptidase M14 carboxypeptidase A K05996 cpt; carboxypeptidase T [EC:3.4.17.18] D Swoo_3021 peptidase M16 domain protein K01408 IDE; insulysin [EC:3.4.24.56] D Swoo_3327 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Swoo_0759 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Swoo_0260 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Swoo_0261 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Swoo_3602 peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Swoo_2996 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Swoo_1076 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Swoo_3188 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Swoo_3796 PepB aminopeptidase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D Swoo_0814 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Swoo_2188 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Swoo_4149 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Swoo_3603 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Swoo_1928 dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Swoo_3059 peptidase M23B K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D Swoo_3282 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Swoo_0022 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Swoo_1096 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Swoo_2816 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Swoo_1082 Carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D Swoo_1511 Peptidyl-Lys metalloendopeptidase K08646 MEP; peptidyl-Lys metalloendopeptidase [EC:3.4.24.20] D Swoo_3568 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Swoo_1870 HtpX domain protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Swoo_2169 peptidase M48 Ste24p K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D Swoo_3274 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Swoo_3738 TonB family protein K02172 blaR1; bla regulator protein blaR1 D Swoo_3429 MAM protein K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33] D Swoo_0560 peptidase U6 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D Swoo_1054 conserved hypothetical protein K21429 impA; immunomodulating metalloprotease D Swoo_1531 protein of unknown function DUF980 K09933 mtfA; MtfA peptidase D Swoo_4226 periplasmic serine protease DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-] D Swoo_0115 Lysyl endopeptidase K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50] D Swoo_3041 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_2373 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_3396 Endonuclease I K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_4623 peptidase domain protein K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_4648 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_2736 Prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D Swoo_3769 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D Swoo_4763 Oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D Swoo_3712 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Swoo_2324 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Swoo_3113 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Swoo_3111 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Swoo_0180 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D Swoo_2465 peptidase S24 and S26 domain protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D Swoo_0360 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Swoo_1242 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Swoo_4617 Prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Swoo_2262 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Swoo_4879 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Swoo_2133 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Swoo_4634 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Swoo_3891 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-] D Swoo_3315 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-] D Swoo_3361 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] D Swoo_2299 signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-] D Swoo_2903 Peptidase S49 domain protein K04774 sohB; serine protease SohB [EC:3.4.21.-] D Swoo_2119 peptidase S51 dipeptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21] D Swoo_0062 Rhomboid family protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D Swoo_4429 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Swoo_2686 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Swoo_0999 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Swoo_1929 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Swoo_3512 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Swoo_3218 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Swoo_0949 peptidase U32 K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D Swoo_3517 peptidase U32 K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D Swoo_3516 peptidase U32 K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D Swoo_4388 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein D Swoo_4395 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein D Swoo_2535 proteinase inhibitor I11 ecotin K08276 eco; ecotin D Swoo_4167 HflC protein K04087 hflC; modulator of FtsH protease HflC D Swoo_4168 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:swd01003] D Swoo_3792 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Swoo_0334 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:swd01005] D Swoo_3269 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Swoo_3268 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Swoo_4528 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Swoo_3271 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Swoo_3118 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Swoo_1820 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Swoo_0768 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Swoo_2069 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D Swoo_1515 conserved hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D Swoo_0067 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Swoo_2532 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Swoo_0068 lipopolysaccharide kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D Swoo_2184 DegT/DnrJ/EryC1/StrS aminotransferase K19715 kdnA; 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:2.6.1.109] D Swoo_2183 iron-containing alcohol dehydrogenase K19714 kdnB; 3-deoxy-alpha-D-manno-octulosonate 8-oxidase [EC:1.1.3.48] D Swoo_3674 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Swoo_2182 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Swoo_4236 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Swoo_4235 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Swoo_0070 glycosyl transferase family 9 K12982 opsX; heptosyltransferase I [EC:2.4.-.-] D Swoo_2815 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Swoo_0769 rfaE bifunctional protein K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D Swoo_4251 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:swd01011] D Swoo_4227 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Swoo_4707 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Swoo_4532 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Swoo_4535 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Swoo_4538 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Swoo_2674 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Swoo_4206 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Swoo_4709 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Swoo_4536 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Swoo_4533 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Swoo_1161 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Swoo_0532 phosphoesterase PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Swoo_1289 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Swoo_1659 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase D Swoo_0334 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Swoo_3792 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Swoo_3708 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Swoo_4539 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Swoo_3712 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Swoo_2324 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Swoo_1163 ErfK/YbiS/YcfS/YnhG family protein K19235 ybiS; L,D-transpeptidase YbiS D Swoo_2153 Peptidoglycan-binding domain 1 protein K21470 ycbB; L,D-transpeptidase YcbB D Swoo_0560 peptidase U6 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D Swoo_3059 peptidase M23B K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D Swoo_2125 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D Swoo_2621 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Swoo_1947 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Swoo_3710 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Swoo_2116 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Swoo_3132 Lytic transglycosylase catalytic K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D Swoo_2612 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D Swoo_1563 Lytic transglycosylase catalytic K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D Swoo_1981 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Swoo_3711 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Swoo_4173 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Swoo_0316 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] D Swoo_1165 major outer membrane lipoprotein, putative K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:swd01004] D Swoo_2041 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Swoo_2040 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Swoo_1667 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Swoo_1669 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Swoo_2826 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Swoo_4044 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Swoo_3181 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Swoo_3008 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Swoo_4609 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Swoo_4612 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Swoo_2044 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Swoo_2042 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Swoo_4611 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Swoo_3196 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Swoo_2148 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D Swoo_3270 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Swoo_3107 Trans-2-enoyl-CoA reductase (NAD(+)) K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D Swoo_2898 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Swoo_3734 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Swoo_3210 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D Swoo_4712 Stearoyl-CoA 9-desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D Swoo_2725 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Swoo_3221 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D Swoo_2110 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_3995 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2941 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2409 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_4860 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2322 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_4587 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_4037 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Swoo_0181 Glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Swoo_2039 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Swoo_1158 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Swoo_4331 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:swd01008] D Swoo_1827 beta-lactamase domain protein K05555 actIV; cyclase [EC:4.-.-.-] D Swoo_1678 ASPIC/UnbV domain protein K21162 sgcE4; enediyne biosynthesis protein E4 C 01006 Prenyltransferases [BR:swd01006] D Swoo_3477 Polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Swoo_1003 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Swoo_3277 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Swoo_4171 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Swoo_3212 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Swoo_4497 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Swoo_0170 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Swoo_0429 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:swd01007] D Swoo_1728 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Swoo_3121 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Swoo_3799 glutamyl-tRNA synthetase class Ic K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Swoo_1212 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Swoo_0348 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Swoo_3116 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Swoo_4427 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Swoo_1977 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Swoo_1291 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Swoo_1059 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Swoo_3702 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Swoo_0940 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Swoo_2575 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Swoo_2223 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Swoo_1545 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Swoo_0013 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Swoo_0012 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Swoo_2479 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Swoo_3251 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Swoo_2491 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Swoo_3339 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Swoo_2066 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Swoo_2067 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Swoo_2308 Aspartate transaminase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Swoo_3063 aminotransferase class I and II K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D Swoo_2267 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Swoo_2411 Aspartate transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Swoo_0852 aminotransferase class I and II K14287 ybdL; methionine transaminase [EC:2.6.1.88] D Swoo_4751 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Swoo_2090 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Swoo_0065 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Swoo_1867 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Swoo_1114 aminotransferase class-III K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D Swoo_0655 succinylornithine transaminase family K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Swoo_3862 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Swoo_1865 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Swoo_1171 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Swoo_0406 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Swoo_0444 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Swoo_0447 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Swoo_2307 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:swd00194] D Swoo_4897 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Swoo_4898 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Swoo_4899 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Swoo_4900 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Swoo_4901 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Swoo_4902 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Swoo_4903 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Swoo_4904 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Swoo_4905 ATP synthase I chain K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:swd03000] D Swoo_4919 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Swoo_3311 transcriptional regulator, AraC family K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D Swoo_0820 transcriptional regulator, AraC family K25495 nimR; AraC family transcriptional regulator, regulator of nimT D Swoo_4046 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator D Swoo_2093 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Swoo_1743 transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Swoo_3471 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Swoo_3066 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Swoo_0440 transcriptional regulator, LysR family K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D Swoo_3732 transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D Swoo_1393 transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D Swoo_1233 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D Swoo_1224 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Swoo_2173 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D Swoo_1805 transcriptional regulator, LysR family K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D Swoo_3864 transcriptional regulator, LysR family K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D Swoo_3668 transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D Swoo_2083 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Swoo_1145 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Swoo_1304 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Swoo_4839 transcriptional regulator, histidine utilization repressor, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D Swoo_2689 fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D Swoo_0318 regulatory protein GntR HTH K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Swoo_3373 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Swoo_1198 transcriptional regulator, TetR family K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D Swoo_0467 transcriptional regulator, TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D Swoo_4564 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator D Swoo_0450 transcriptional regulator, TetR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D Swoo_3845 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Swoo_3433 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Swoo_4056 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Swoo_1571 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D Swoo_4711 transcriptional regulator, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D Swoo_0916 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D Swoo_2484 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Swoo_0461 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Swoo_0243 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Swoo_2997 transcriptional regulator, LuxR family K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D Swoo_1880 transcriptional regulator, LuxR family K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation D Swoo_0757 transcriptional regulator, LuxR family K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation D Swoo_4115 ATP-dependent transcriptional regulator, MalT-like, LuxR family K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D Swoo_0934 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Swoo_3365 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Swoo_3192 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Swoo_0297 transcriptional regulator, MerR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D Swoo_1842 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Swoo_0662 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Swoo_4557 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Swoo_2417 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Swoo_1775 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Swoo_4881 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D Swoo_4387 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Swoo_1287 transcriptional regulator, ArsR family K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D Swoo_0026 transcriptional regulator, ArsR family K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D Swoo_2540 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D Swoo_3737 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Swoo_4706 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Swoo_0504 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Swoo_1267 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D Swoo_0496 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Swoo_4574 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Swoo_1614 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Swoo_2936 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Swoo_2519 putative sigma54 specific transcriptional regulator K11908 vasH; sigma-54 dependent transcriptional regulator D Swoo_0688 transcriptional regulator, NifA subfamily, Fis Family K12266 norR; anaerobic nitric oxide reductase transcription regulator D Swoo_0760 putative phytochrome sensor protein K12266 norR; anaerobic nitric oxide reductase transcription regulator D Swoo_3993 transcriptional regulator, Fis family K15836 fhlA; formate hydrogenlyase transcriptional activator D Swoo_3130 transcriptional regulator, CdaR K02647 cdaR; carbohydrate diacid regulator D Swoo_4481 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Swoo_3592 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Swoo_4745 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Swoo_0621 methionine repressor, MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D Swoo_0714 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Swoo_2253 FMN-binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D Swoo_3622 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D Swoo_4906 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Swoo_1650 transcriptional acivator RfaH K05785 rfaH; transcriptional antiterminator RfaH D Swoo_1001 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism D Swoo_1717 transcriptional regulator, TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D Swoo_2176 amino acid-binding ACT domain protein K03567 gcvR; glycine cleavage system transcriptional repressor D Swoo_0216 transcriptional regulator, PaaX family K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D Swoo_3101 sigma54 specific transcriptional regulator, Fis family K03974 pspF; psp operon transcriptional activator D Swoo_3098 phage shock protein C, PspC K03973 pspC; phage shock protein C D Swoo_3371 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D Swoo_1337 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator D Swoo_2439 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Swoo_3798 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Swoo_3893 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Swoo_1381 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D Swoo_4542 MraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:swd03021] D Swoo_4665 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Swoo_4697 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Swoo_4696 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Swoo_4582 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Swoo_1153 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Swoo_3342 RNA polymerase, sigma 70 subunit, RpoD family K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D Swoo_1237 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Swoo_3034 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Swoo_0204 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor D Swoo_4240 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Swoo_1635 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Swoo_4324 SNF2-related protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D Swoo_3562 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Swoo_1386 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Swoo_4702 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Swoo_4163 Glutathione S-transferase domain K03599 sspA; stringent starvation protein A D Swoo_4162 Stringent starvation protein B K03600 sspB; stringent starvation protein B D Swoo_1702 response regulator receiver modulated serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Swoo_1700 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D Swoo_1701 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Swoo_1238 anti sigma-E protein, RseA K03597 rseA; sigma-E factor negative regulatory protein RseA D Swoo_1239 sigma E regulatory protein, MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB D Swoo_1240 positive regulator of sigma E, RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC D Swoo_2439 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Swoo_3798 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Swoo_3893 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Swoo_3574 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Swoo_0151 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D Swoo_0512 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Swoo_0437 transcriptional antiterminator, Rof K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:swd03019] D Swoo_2032 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D Swoo_4398 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Swoo_1243 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Swoo_4217 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Swoo_4178 Exonuclease RNase T and DNA polymerase III K13288 orn; oligoribonuclease [EC:3.1.-.-] D Swoo_0514 DEAD/DEAH box helicase domain protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Swoo_0703 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Swoo_1745 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Swoo_2205 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Swoo_3506 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Swoo_3529 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Swoo_1095 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Swoo_0636 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Swoo_4552 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Swoo_2292 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Swoo_3350 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Swoo_3556 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Swoo_0512 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Swoo_3583 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Swoo_4308 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Swoo_4170 RNA chaperone Hfq K03666 hfq; host factor-I protein D Swoo_3800 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Swoo_1227 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Swoo_3338 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Swoo_4422 diguanylate cyclase/phosphodiesterase K18765 csrD; RNase E specificity factor CsrD D Swoo_0530 regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A D Swoo_2615 regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A D Swoo_4330 protein of unknown function DUF1260 K09893 rraB; regulator of ribonuclease activity B D Swoo_4243 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ D Swoo_2683 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D Swoo_3793 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] D Swoo_R0105 CsrB RNA K18515 csrB; small regulatory RNA CsrB D Swoo_R0005 Spot 42 RNA K18527 spf; small regulatory RNA Spot 42 C 03041 Spliceosome C 03011 Ribosome [BR:swd03011] D Swoo_2311 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Swoo_3281 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Swoo_4684 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Swoo_4666 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Swoo_4673 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Swoo_4212 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Swoo_4694 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Swoo_4676 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Swoo_4221 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Swoo_4691 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Swoo_4667 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Swoo_4695 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Swoo_4668 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Swoo_4677 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Swoo_3558 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Swoo_1254 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Swoo_4681 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Swoo_4210 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Swoo_4686 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Swoo_1288 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Swoo_1156 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Swoo_4700 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Swoo_4687 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Swoo_4690 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Swoo_4689 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Swoo_4678 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Swoo_4675 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Swoo_4209 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Swoo_4699 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Swoo_4701 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Swoo_4698 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Swoo_4222 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Swoo_4680 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Swoo_4671 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Swoo_4683 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Swoo_4664 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Swoo_4674 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Swoo_1257 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Swoo_2488 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Swoo_1004 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Swoo_4685 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Swoo_4688 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Swoo_4679 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Swoo_1005 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Swoo_4560 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Swoo_4682 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Swoo_4672 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Swoo_4424 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Swoo_2038 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Swoo_4559 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Swoo_4932 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Swoo_2489 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Swoo_4669 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Swoo_2155 ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Swoo_R0144 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0141 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0151 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0130 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0163 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0095 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0157 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0146 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0132 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0099 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0153 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0143 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0161 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0165 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0142 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0147 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0152 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0158 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0131 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0096 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0164 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:swd03009] D Swoo_1243 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Swoo_0781 protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Swoo_4178 Exonuclease RNase T and DNA polymerase III K13288 orn; oligoribonuclease [EC:3.1.-.-] D Swoo_1244 GTP-binding protein Era K03595 era; GTPase D Swoo_1006 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Swoo_2439 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Swoo_3798 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Swoo_3893 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Swoo_3562 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Swoo_1386 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Swoo_4702 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Swoo_1049 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Swoo_3411 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Swoo_3730 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Swoo_3873 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Swoo_1014 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Swoo_0036 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Swoo_3442 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Swoo_2212 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Swoo_4140 rRNA (guanine-N(2)-)-methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Swoo_0200 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Swoo_4134 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Swoo_1986 RNA methylase, NOL1/NOP2/sun family K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] D Swoo_4908 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Swoo_4541 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Swoo_0353 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Swoo_0144 protein of unknown function DUF548 K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D Swoo_1162 rRNA (guanine-N(1)-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Swoo_2051 rRNA (guanine-N(1)-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Swoo_4216 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Swoo_3569 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Swoo_4824 protein of unknown function DUF890 K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D Swoo_3625 rRNA (guanine-N(2)-)-methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D Swoo_3707 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Swoo_4260 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Swoo_2890 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Swoo_0143 protein of unknown function DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D Swoo_2143 putative RNA methylase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D Swoo_3468 conserved hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D Swoo_1541 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Swoo_3354 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Swoo_4781 pseudouridine synthase Rlu family protein, TIGR01621 K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_2380 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_0913 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_0917 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_1751 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_3153 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_0572 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_2907 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Swoo_2033 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Swoo_3722 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Swoo_2703 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D Swoo_0942 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D Swoo_3716 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Swoo_4122 alpha-L-glutamate ligase, RimK family K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D Swoo_1255 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Swoo_3928 protein of unknown function DUF181 K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D Swoo_0506 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Swoo_3018 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D Swoo_2708 Cupin 4 family protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D Swoo_2199 Cupin 4 family protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D Swoo_2032 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D Swoo_4398 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Swoo_1336 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Swoo_0690 DEAD/DEAH box helicase domain protein K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D Swoo_0636 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Swoo_0892 DEAD/DEAH box helicase domain protein K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D Swoo_4179 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Swoo_1548 small GTP-binding protein K03977 engA; GTPase D Swoo_2029 GTP-binding protein HSR1-related K14540 rbgA; ribosome biogenesis GTPase A D Swoo_4169 GTP-binding proten HflX K03665 hflX; GTPase D Swoo_0044 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Swoo_4583 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Swoo_3560 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Swoo_3563 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Swoo_3069 RNA-binding S4 domain protein K14761 rlbA; ribosome-associated protein D Swoo_3706 iojap-like protein K09710 ybeB; ribosome-associated protein D Swoo_3698 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Swoo_3570 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Swoo_3047 conserved hypothetical protein K14762 yibL; ribosome-associated protein D Swoo_4389 protein of unknown function DUF615 K09889 yjgA; ribosome-associated protein D Swoo_2147 ribosome modulation factor K03812 rmf; ribosome modulation factor D Swoo_4241 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D Swoo_1264 sigma 54 modulation protein/ribosomal protein S30EA K05809 raiA; ribosome-associated inhibitor A D Swoo_3306 sigma 54 modulation protein/ribosomal protein S30EA K05809 raiA; ribosome-associated inhibitor A D Swoo_3692 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Swoo_2037 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:swd03016] D Swoo_1166 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Swoo_1728 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Swoo_3251 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Swoo_1291 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Swoo_3702 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Swoo_1977 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Swoo_3121 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Swoo_4427 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Swoo_0940 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Swoo_2575 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Swoo_3339 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Swoo_2223 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Swoo_2491 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Swoo_2479 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Swoo_3116 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Swoo_1059 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Swoo_1545 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Swoo_2066 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Swoo_2067 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Swoo_1212 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Swoo_0348 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Swoo_4615 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Swoo_1883 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Swoo_1320 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Swoo_3241 protein of unknown function UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Swoo_2984 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Swoo_3559 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Swoo_3346 tRNA pseudouridine synthase D TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Swoo_1776 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Swoo_0566 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Swoo_0044 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Swoo_4171 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Swoo_4928 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Swoo_4909 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Swoo_4713 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Swoo_4717 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Swoo_4931 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Swoo_R0013 RNA component of RNaseP K01978 rnpB; M1 RNA D Swoo_2739 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D Swoo_4568 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Swoo_2111 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D Swoo_3794 Phosphoesterase HXTX K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Swoo_1379 ABC transporter related K06020 ettA; energy-dependent translational throttle protein EttA D Swoo_0013 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Swoo_0012 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Swoo_3799 glutamyl-tRNA synthetase class Ic K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Swoo_0018 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Swoo_1361 YbaK/prolyl-tRNA synthetase associated region K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D Swoo_1562 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Swoo_4203 TIM-barrel protein, yjbN family K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D Swoo_0505 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Swoo_1786 dihydrouridine synthase DuS K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D Swoo_3696 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Swoo_2577 methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Swoo_2578 methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D Swoo_3417 Methyltransferase type 12 K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D Swoo_4710 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D Swoo_1256 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Swoo_4585 tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D Swoo_1773 RNA methyltransferase, TrmH family, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D Swoo_0264 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Swoo_0893 methyltransferase small K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D Swoo_3289 pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D Swoo_4781 pseudouridine synthase Rlu family protein, TIGR01621 K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_2380 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_0913 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_0917 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_1751 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_3153 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_0572 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Swoo_2705 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Swoo_2415 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Swoo_0017 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Swoo_2170 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Swoo_2476 sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B D Swoo_2475 sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C D Swoo_2474 sulfur relay protein TusD/DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Swoo_2477 sulfur relay protein, TusE/DsrC/DsvC family K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Swoo_1778 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D Swoo_3890 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D Swoo_3119 tRNA--hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D Swoo_3009 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D Swoo_1755 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Swoo_2552 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Swoo_2551 radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Swoo_3300 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Swoo_2991 iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Swoo_4714 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D Swoo_3473 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Swoo_3265 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Swoo_2105 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Swoo_1157 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Swoo_4174 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Swoo_4150 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Swoo_4217 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Swoo_3556 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:swd03012] D Swoo_1338 translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1 D Swoo_3561 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Swoo_2490 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Swoo_0678 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Swoo_3280 translation elongation factor Ts K02357 tsf; elongation factor Ts D Swoo_4704 translation elongation factor Tu K02358 tuf; elongation factor Tu D Swoo_4692 translation elongation factor Tu K02358 tuf; elongation factor Tu D Swoo_4693 translation elongation factor G K02355 fusA; elongation factor G D Swoo_2198 translation elongation factor G K02355 fusA; elongation factor G D Swoo_3685 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Swoo_3278 ribosome recycling factor K02838 frr; ribosome recycling factor D Swoo_3684 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Swoo_3693 Aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Swoo_2698 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Swoo_2268 translation elongation factor P K02356 efp; elongation factor P D Swoo_0939 hypothetical protein K02836 prfB; peptide chain release factor 2 D Swoo_3554 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D Swoo_3902 peptide chain release factor H K02839 prfH; peptide chain release factor D Swoo_0807 protein of unknown function DUF331 K09890 arfA; alternative ribosome-rescue factor D Swoo_0550 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:swd03110] D Swoo_2699 ATP-dependent Clp protease, ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D Swoo_3720 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Swoo_3112 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Swoo_4430 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Swoo_1796 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Swoo_3583 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Swoo_1780 Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D Swoo_2505 2-alkenal reductase K04045 hscC; molecular chaperone HscC D Swoo_1974 conserved hypothetical protein K04046 yegD; hypothetical chaperone protein D Swoo_4308 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Swoo_3582 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Swoo_1020 heat shock protein DnaJ domain protein K05801 djlA; DnaJ like chaperone protein D Swoo_1779 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB D Swoo_4737 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Swoo_3479 GrpE protein K03687 GRPE; molecular chaperone GrpE D Swoo_1953 heat shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA D Swoo_4736 RNA-binding S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D Swoo_4309 chaperonin Cpn10 K04078 groES; chaperonin GroES D Swoo_3568 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Swoo_4904 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Swoo_4875 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Swoo_0282 protein of unknown function Spy-related K06006 cpxP; periplasmic protein CpxP/Spy D Swoo_3965 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D Swoo_4198 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A D Swoo_3527 cytoplasmic chaperone TorD family protein K03533 torD; TorA specific chaperone D Swoo_0235 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Swoo_3041 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_2373 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_3396 Endonuclease I K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_4623 peptidase domain protein K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_4648 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Swoo_1311 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Swoo_3941 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Swoo_0561 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Swoo_3642 peptidyl-prolyl cis-trans isomerase cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Swoo_0957 peptidyl-prolyl cis-trans isomerase cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Swoo_3117 peptidyl-prolyl cis-trans isomerase cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Swoo_4282 peptidyl-prolyl cis-trans isomerase cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Swoo_3109 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D Swoo_0968 peptidylprolyl isomerase FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D Swoo_4454 peptidylprolyl isomerase FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D Swoo_4475 peptidylprolyl isomerase FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D Swoo_3580 peptidylprolyl isomerase FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D Swoo_1293 peptidylprolyl isomerase, FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D Swoo_1269 peptidylprolyl isomerase FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Swoo_1948 peptidylprolyl isomerase FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Swoo_2630 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Swoo_3071 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Swoo_0952 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Swoo_1016 SurA domain K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D Swoo_0513 thioredoxin K03671 TXN; thioredoxin D Swoo_1797 Thioredoxin domain K05838 ybbN; putative thioredoxin D Swoo_2727 glutaredoxin, GrxA family K03674 grxA; glutaredoxin 1 D Swoo_2160 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin D Swoo_0400 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Swoo_2842 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Swoo_2691 Disulphide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D Swoo_0896 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Swoo_4158 Protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D Swoo_4655 periplasmic protein thiol--disulphide oxidoreductase DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:swd04131] D Swoo_1783 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Swoo_1084 band 7 protein K07192 FLOT; flotillin D Swoo_3880 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Swoo_2393 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Swoo_2395 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Swoo_2541 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Swoo_1796 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:swd04121] C 03051 Proteasome [BR:swd03051] D Swoo_1796 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:swd03032] D Swoo_2608 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Swoo_3186 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Swoo_4919 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Swoo_3110 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Swoo_4353 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Swoo_2068 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Swoo_2312 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Swoo_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Swoo_4207 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Swoo_1154 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Swoo_0640 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Swoo_3266 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Swoo_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Swoo_1060 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Swoo_3704 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Swoo_1983 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Swoo_2607 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_2197 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_2834 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_1793 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Swoo_3267 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Swoo_0060 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Swoo_2847 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Swoo_0343 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Swoo_2274 SeqA family protein K03645 seqA; negative modulator of initiation of replication D Swoo_2164 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D Swoo_2306 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Swoo_0004 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Swoo_4188 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Swoo_4190 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Swoo_1803 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Swoo_2976 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:swd03036] D Swoo_4919 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Swoo_1243 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Swoo_1084 band 7 protein K07192 FLOT; flotillin D Swoo_3237 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS D Swoo_3110 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Swoo_4353 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Swoo_2068 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Swoo_2312 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Swoo_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Swoo_0350 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein D Swoo_0504 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Swoo_4170 RNA chaperone Hfq K03666 hfq; host factor-I protein D Swoo_2173 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D Swoo_2484 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Swoo_0461 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Swoo_0243 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Swoo_2785 37kDa nucleoid-associated protein K06899 ndpA; nucleoid-associated protein D Swoo_2849 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Swoo_2909 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Swoo_2908 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D Swoo_4530 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Swoo_3349 Septum formation initiator K05589 ftsB; cell division protein FtsB D Swoo_0202 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Swoo_4539 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Swoo_2483 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Swoo_4540 cell division protein FtsL K03586 ftsL; cell division protein FtsL D Swoo_4428 Sporulation domain protein K03591 ftsN; cell division protein FtsN D Swoo_4531 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ D Swoo_4534 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Swoo_0203 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Swoo_4529 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Swoo_2848 cell division protein ZipA K03528 zipA; cell division protein ZipA D Swoo_3974 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA D Swoo_0402 protein of unknown function DUF904 K09892 zapB; cell division protein ZapB D Swoo_2142 protein of unknown function DUF1379 K18657 zapC; cell division protein ZapC D Swoo_0301 protein of unknown function DUF1342 K18778 zapD; cell division protein ZapD D Swoo_4223 AFG1-family ATPase K06916 zapE; cell division protein ZapE D Swoo_0734 AFG1-family ATPase K06916 zapE; cell division protein ZapE D Swoo_4173 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Swoo_0131 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1356 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_2179 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_0466 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1830 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1365 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_2114 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Swoo_2113 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Swoo_4628 hypothetical protein K03609 minD; septum site-determining protein MinD D Swoo_2112 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Swoo_0179 conserved hypothetical protein K13053 sulA; cell division inhibitor SulA D Swoo_4564 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator D Swoo_2274 SeqA family protein K03645 seqA; negative modulator of initiation of replication D Swoo_4402 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Swoo_4401 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Swoo_4400 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Swoo_3709 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Swoo_1769 conserved hypothetical protein K03496 parA; chromosome partitioning protein D Swoo_1641 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Swoo_4907 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Swoo_1535 conserved hypothetical protein K03496 parA; chromosome partitioning protein D Swoo_4906 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Swoo_4188 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Swoo_4190 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Swoo_4909 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Swoo_4908 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Swoo_0489 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D Swoo_0895 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Swoo_1978 ATP-binding protein, Mrp/Nbp35 family K03593 mrp; ATP-binding protein involved in chromosome partitioning D Swoo_0058 GTP-binding protein HSR1-related K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:swd03400] D Swoo_1744 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Swoo_2777 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Swoo_3988 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Swoo_1319 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Swoo_2562 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Swoo_0299 mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Swoo_4504 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Swoo_4563 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Swoo_3929 deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D Swoo_1743 transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Swoo_0014 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Swoo_0078 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Swoo_2927 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Swoo_1274 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Swoo_0897 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Swoo_2847 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Swoo_0060 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Swoo_0638 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Swoo_2026 ABC transporter related K03701 uvrA; excinuclease ABC subunit A D Swoo_2554 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Swoo_2151 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Swoo_4498 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Swoo_0596 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Swoo_4697 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Swoo_4696 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Swoo_4665 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Swoo_4582 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Swoo_1811 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Swoo_3341 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Swoo_4172 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Swoo_1226 DNA mismatch repair endonuclease mutH K03573 mutH; DNA mismatch repair protein MutH D Swoo_2049 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Swoo_1558 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Swoo_3476 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Swoo_3266 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Swoo_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Swoo_1060 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Swoo_3704 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Swoo_1983 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Swoo_2607 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_2197 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_2834 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Swoo_1793 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Swoo_0640 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Swoo_0343 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Swoo_2642 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Swoo_2641 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Swoo_2643 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Swoo_0306 AAA ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Swoo_3340 recA protein K03553 recA; recombination protein RecA D Swoo_2572 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Swoo_2571 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Swoo_2573 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Swoo_4426 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Swoo_4211 single-strand binding protein/Primosomal replication protein n K02686 priB; primosomal replication protein N D Swoo_3088 primosomal replication protein N'', putative K04067 priC; primosomal replication protein N'' D Swoo_3060 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Swoo_3061 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 D Swoo_3540 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Swoo_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Swoo_4592 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Swoo_1245 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Swoo_1795 recombination protein RecR K06187 recR; recombination protein RecR D Swoo_3359 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Swoo_3455 putative exonuclease RdgC K03554 rdgC; recombination associated protein RdgC D Swoo_2726 type III restriction protein res subunit K19789 radD; DNA repair protein RadD D Swoo_2306 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Swoo_0004 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Swoo_1803 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Swoo_3110 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Swoo_4353 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Swoo_0504 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Swoo_2068 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Swoo_2312 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Swoo_4552 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Swoo_2292 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Swoo_3237 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS D Swoo_3604 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Swoo_2466 UMUC domain protein DNA-repair protein K03502 umuC; DNA polymerase V D Swoo_2465 peptidase S24 and S26 domain protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D Swoo_0180 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D Swoo_3085 DNA polymerase B region K02336 polB; DNA polymerase II [EC:2.7.7.7] D Swoo_2970 regulatory protein RecX K03565 recX; regulatory protein D Swoo_0468 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D Swoo_3086 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Swoo_2097 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Swoo_2303 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Swoo_2302 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:swd03029] D Swoo_4165 Cytochrome b/b6 domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Swoo_3561 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Swoo_2490 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Swoo_3280 translation elongation factor Ts K02357 tsf; elongation factor Ts D Swoo_4704 translation elongation factor Tu K02358 tuf; elongation factor Tu D Swoo_4692 translation elongation factor Tu K02358 tuf; elongation factor Tu D Swoo_4693 translation elongation factor G K02355 fusA; elongation factor G D Swoo_2198 translation elongation factor G K02355 fusA; elongation factor G D Swoo_1244 GTP-binding protein Era K03595 era; GTPase D Swoo_1212 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Swoo_3702 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Swoo_2575 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Swoo_4427 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Swoo_0640 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Swoo_3273 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D Swoo_3583 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Swoo_3479 GrpE protein K03687 GRPE; molecular chaperone GrpE D Swoo_4308 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Swoo_4309 chaperonin Cpn10 K04078 groES; chaperonin GroES D Swoo_3582 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Swoo_1776 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Swoo_0566 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Swoo_1779 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB D Swoo_2160 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin D Swoo_1978 ATP-binding protein, Mrp/Nbp35 family K03593 mrp; ATP-binding protein involved in chromosome partitioning D Swoo_0170 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Swoo_0429 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Swoo_0176 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D Swoo_0171 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Swoo_4929 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Swoo_0173 conserved hypothetical protein K14998 SURF1; surfeit locus 1 family protein D Swoo_0169 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 D Swoo_1796 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:swd02000] D Swoo_1819 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Swoo_3807 ABC transporter related K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Swoo_0988 ABC transporter related K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D Swoo_1742 ABC transporter related K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D Swoo_4001 lipid A ABC exporter family, fused ATPase and inner membrane subunits K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Swoo_0476 type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Swoo_0711 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Swoo_0710 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Swoo_2145 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein D Swoo_4788 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Swoo_4247 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Swoo_4787 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Swoo_4786 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Swoo_0087 extracellular solute-binding protein, family 1 K05772 tupA; tungstate transport system substrate-binding protein D Swoo_0086 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein D Swoo_0085 ABC transporter related K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Swoo_0996 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Swoo_0997 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Swoo_0998 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Swoo_1131 extracellular solute-binding protein family 1 K11073 potF; putrescine transport system substrate-binding protein D Swoo_1134 Ornithine carbamoyltransferase K11074 potI; putrescine transport system permease protein D Swoo_1133 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein D Swoo_1132 spermidine/putrescine ABC transporter ATPase subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D Swoo_3366 spermidine/putrescine-binding periplasmic protein-like protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Swoo_1845 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D Swoo_1846 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein D Swoo_1847 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Swoo_4644 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Swoo_0731 conserved hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein D Swoo_4231 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Swoo_4232 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Swoo_4233 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Swoo_4230 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein D Swoo_4229 anti-sigma-factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein D Swoo_1533 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Swoo_3450 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Swoo_3168 binding-protein-dependent transport systems inner membrane component K02037 pstC; phosphate transport system permease protein D Swoo_3167 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Swoo_3166 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Swoo_2803 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D Swoo_2801 binding-protein-dependent transport systems inner membrane component K02042 phnE; phosphonate transport system permease protein D Swoo_2802 ABC transporter related K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Swoo_4040 regulatory protein K11959 urtA; urea transport system substrate-binding protein D Swoo_1419 conserved hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Swoo_3985 conserved hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Swoo_3508 conserved hypothetical amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Swoo_2080 conserved hypothetical amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Swoo_2079 extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Swoo_1937 conserved hypothetical ABC transporter protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Swoo_2990 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Swoo_2256 conserved hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Swoo_0809 conserved hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Swoo_0092 conserved hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Swoo_3102 extracellular solute-binding protein family 5 K19226 sapA; cationic peptide transport system substrate-binding protein D Swoo_3103 binding-protein-dependent transport systems inner membrane component K19227 sapB; cationic peptide transport system permease protein D Swoo_3104 binding-protein-dependent transport systems inner membrane component K19228 sapC; cationic peptide transport system permease protein D Swoo_3105 oligopeptide/dipeptide ABC transporter, ATPase subunit K19229 sapD; cationic peptide transport system ATP-binding protein D Swoo_3106 ABC transporter related K19230 sapF; cationic peptide transport system ATP-binding protein D Swoo_4008 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein D Swoo_4009 transport system permease protein K25133 hmuU; heme transport system permease protein D Swoo_4010 ABC transporter related K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D Swoo_4085 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Swoo_4086 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Swoo_4079 periplasmic binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D Swoo_0096 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Swoo_0095 ABC transporter related K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Swoo_4333 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D Swoo_4332 ABC-3 protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D Swoo_1077 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D Swoo_1078 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Swoo_4239 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Swoo_4866 ABC-2 type transporter K09696 natB; sodium transport system permease protein D Swoo_4865 ABC transporter related K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Swoo_4447 copper ABC transporter, permease protein K19341 nosY; Cu-processing system permease protein D Swoo_4468 copper ABC transporter, permease protein K19341 nosY; Cu-processing system permease protein D Swoo_4469 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein D Swoo_4448 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein D Swoo_1813 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Swoo_1815 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Swoo_1814 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Swoo_4662 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D Swoo_4661 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D Swoo_4660 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D Swoo_4659 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Swoo_0203 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Swoo_0202 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Swoo_2004 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Swoo_2261 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Swoo_3816 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Swoo_4392 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Swoo_4391 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Swoo_2054 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Swoo_4363 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Swoo_4862 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Swoo_4362 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Swoo_2003 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Swoo_2260 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Swoo_3817 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Swoo_2053 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Swoo_4070 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Swoo_4848 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Swoo_4071 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Swoo_4107 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Swoo_2022 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Swoo_1903 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Swoo_2896 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Swoo_2023 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Swoo_1430 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Swoo_2897 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Swoo_4849 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Swoo_1899 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Swoo_4072 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Swoo_2021 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Swoo_4106 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Swoo_1431 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Swoo_3094 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Swoo_2494 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Swoo_2765 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Swoo_0160 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Swoo_4310 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Swoo_0140 multi antimicrobial extrusion protein MatE K26937 dinF; MATE family, multidrug efflux pump D Swoo_3482 multi antimicrobial extrusion protein MatE K26937 dinF; MATE family, multidrug efflux pump D Swoo_2211 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D Swoo_1148 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D Swoo_1315 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D Swoo_0819 major facilitator superfamily MFS_1 K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D Swoo_3016 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D Swoo_4384 major facilitator superfamily MFS_1 K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D Swoo_1877 nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Swoo_2626 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Swoo_2635 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Swoo_2640 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Swoo_3644 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Swoo_1956 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Swoo_0254 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Swoo_2329 major facilitator superfamily MFS_1 K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD D Swoo_3791 major facilitator superfamily MFS_1 K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D Swoo_4522 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Swoo_1721 major facilitator superfamily MFS_1 K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D Swoo_3423 major facilitator superfamily MFS_1 K06141 tsgA; MFS transporter, TsgA protein D Swoo_2191 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Swoo_1228 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D Swoo_2192 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Swoo_4244 Phosphotransferase system, phosphocarrier protein HPr K08485 ptsO; phosphocarrier protein NPr D Swoo_2190 PTS system, glucose subfamily, IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Swoo_3287 phosphotransferase system EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D Swoo_4242 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Swoo_1206 MIP family channel protein K06188 aqpZ; aquaporin Z D Swoo_2766 Ion transport protein K10716 kch; voltage-gated potassium channel D Swoo_0719 Ion transport 2 domain protein K10716 kch; voltage-gated potassium channel D Swoo_4024 Ion transport protein K08714 VGSC; voltage-gated sodium channel D Swoo_1182 ammonium transporter K03320 amt; ammonium transporter, Amt family D Swoo_0980 Rh family protein/ammonium transporter K03320 amt; ammonium transporter, Amt family D Swoo_0907 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Swoo_0994 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Swoo_0127 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Swoo_0424 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Swoo_1972 glutathione S-transferase, N-terminal domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Swoo_3219 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Swoo_4163 Glutathione S-transferase domain K03599 sspA; stringent starvation protein A D Swoo_2124 LPXTG-motif cell wall anchor domain protein K07114 yfbK; Ca-activated chloride channel homolog D Swoo_3031 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog D Swoo_3032 Tetratricopeptide TPR_2 repeat protein K07114 yfbK; Ca-activated chloride channel homolog D Swoo_3319 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog D Swoo_2473 protein of unknown function UPF0005 K19416 yccA; modulator of FtsH protease D Swoo_2880 formate/nitrite transporter K06212 focA; formate transporter D Swoo_4182 MscS Mechanosensitive ion channel K22051 mscM; miniconductance mechanosensitive channel D Swoo_4338 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Swoo_1345 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Swoo_4512 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Swoo_1943 MscS Mechanosensitive ion channel K16052 ynaI; MscS family membrane protein D Swoo_4834 MscS Mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel D Swoo_3528 MgtE intracellular region K06213 mgtE; magnesium transporter D Swoo_4245 magnesium transporter K06213 mgtE; magnesium transporter D Swoo_3475 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Swoo_3474 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Swoo_4218 Sel1 domain protein repeat-containing protein K21217 motX; sodium-type polar flagellar protein MotX D Swoo_2738 OmpA/MotB domain protein K21218 motY; sodium-type flagellar protein MotY D Swoo_4006 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Swoo_3077 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Swoo_3078 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Swoo_3076 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Swoo_2734 protein TolQ K03562 tolQ; biopolymer transport protein TolQ D Swoo_2733 protein TolR K03560 tolR; biopolymer transport protein TolR D Swoo_2809 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D Swoo_2480 CrcB protein K06199 crcB; fluoride exporter D Swoo_1540 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Swoo_1251 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Swoo_1075 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Swoo_3084 porin Gram-negative type K14062 ompN; outer membrane protein N D Swoo_4843 OmpA domain protein transmembrane region-containing protein K16079 omp31; outer membrane immunogenic protein D Swoo_3376 OmpA domain protein transmembrane region-containing protein K16079 omp31; outer membrane immunogenic protein D Swoo_1281 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Swoo_4513 OmpA domain protein transmembrane region-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Swoo_1344 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Swoo_0473 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Swoo_0615 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Swoo_4546 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Swoo_3037 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Swoo_2401 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Swoo_3550 nucleoside-specific channel-forming protein Tsx K05517 tsx; nucleoside-specific channel-forming protein D Swoo_3787 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein D Swoo_3735 TonB-dependent receptor plug K16092 btuB; vitamin B12 transporter D Swoo_4004 TonB-dependent heme/hemoglobin receptor family protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D Swoo_3918 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D Swoo_4894 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_0452 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_0702 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_1412 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_2875 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_0946 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_3992 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_0516 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_2921 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_0213 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_2209 outer membrane insertion C-terminal signal K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_0587 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_1305 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_1784 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_1886 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_4555 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_4114 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_0230 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_2662 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_2565 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_2993 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_3082 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_3083 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_2924 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_3658 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_3836 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_0906 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_1426 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_1434 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_4030 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_4039 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_3254 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_3939 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Swoo_0665 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Swoo_4195 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Swoo_0474 type I secretion outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system D Swoo_1651 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Swoo_3273 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D Swoo_1547 outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB D Swoo_2178 NlpBDapX family lipoprotein K07287 bamC; outer membrane protein assembly factor BamC D Swoo_3723 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D Swoo_1523 SmpA/OmlA domain protein K06186 bamE; outer membrane protein assembly factor BamE D Swoo_2687 surface antigen (D15) K07278 tamA; translocation and assembly module TamA D Swoo_2688 protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB D Swoo_1677 conserved repeat domain protein K21449 ata; trimeric autotransporter adhesin D Swoo_4238 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D Swoo_4237 protein of unknown function DUF1239 K11719 lptC; lipopolysaccharide export system protein LptC D Swoo_1017 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein D Swoo_3703 Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein D Swoo_3699 CBS domain containing protein K06189 corC; hemolysin (HlyC) family protein D Swoo_2202 major facilitator superfamily MFS_1 K16211 malY; maltose/moltooligosaccharide transporter D Swoo_2100 ethanolamine transproter K16238 eat; ethanolamine permease D Swoo_0244 amino acid permease-associated region K16263 yjeH; amino acid efflux transporter D Swoo_0283 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D Swoo_0556 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein D Swoo_0667 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein D Swoo_0189 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D Swoo_1569 acriflavin resistance protein K18303 mexK; multidrug efflux pump D Swoo_0132 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump D Swoo_2180 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Swoo_0465 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Swoo_1357 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump D Swoo_0377 small multidrug resistance protein K03297 emrE; small multidrug resistance pump D Swoo_4554 RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD D Swoo_4258 RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD D Swoo_2742 Na+/H+ antiporter NhaC K07084 yuiF; putative amino acid transporter D Swoo_3133 Gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D Swoo_1910 anaerobic c4-dicarboxylate antiporter, Dcu family K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D Swoo_1195 putative transporter, BCCT family protein K05020 opuD; glycine betaine transporter D Swoo_1351 BCCT transporter K05020 opuD; glycine betaine transporter D Swoo_0815 BCCT transporter K05020 opuD; glycine betaine transporter D Swoo_3164 choline/carnitine/betaine transporter K02168 betT; choline/glycine/proline betaine transport protein D Swoo_4234 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter D Swoo_4588 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter D Swoo_2877 sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter D Swoo_3036 sodium/proline symporter K11928 putP; sodium/proline symporter D Swoo_2838 Na+/solute symporter K14393 actP; cation/acetate symporter D Swoo_1748 sodium:dicarboxylate symporter K07862 sstT; serine/threonine transporter D Swoo_1451 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D Swoo_4778 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D Swoo_4777 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D Swoo_2690 Na+/H+ antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family D Swoo_4486 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D Swoo_3234 Na+/H+ antiporter NhaC K18218 tet35; tetracycline resistance efflux pump D Swoo_0762 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter D Swoo_3825 sodium/hydrogen exchanger K03316 nhaP; Na+:H+ antiporter D Swoo_1441 potassium efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D Swoo_1442 NAD(P)H dehydrogenase (quinone) K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D Swoo_3263 sodium/hydrogen exchanger K03455 KEA1_2_3; K+:H+ antiporter D Swoo_0034 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D Swoo_0024 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D Swoo_0035 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Swoo_1854 permease for cytosine/purines uracil thiamine allantoin K10974 codB; cytosine permease D Swoo_2162 uracil-xanthine permease K02824 uraA; uracil permease D Swoo_3523 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Swoo_3600 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Swoo_4434 aromatic amino acid transporter K03834 tyrP; tyrosine-specific transport protein D Swoo_3878 aromatic amino acid permease K03834 tyrP; tyrosine-specific transport protein D Swoo_0182 aromatic amino acid transporter K03835 mtr; tryptophan-specific transport protein D Swoo_0863 aromatic amino acid permease K03837 sdaC; serine transporter D Swoo_3149 putative serine transporter K03837 sdaC; serine transporter D Swoo_4890 serine transporter K26604 cyuP; cysteine uptake transport protein D Swoo_1201 Chloride channel core K03281 clcA; chloride channel protein, CIC family D Swoo_0936 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter D Swoo_3320 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D Swoo_4288 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family D Swoo_2031 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family D Swoo_3408 natural resistance-associated macrophage protein K03322 mntH; manganese transport protein D Swoo_1726 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP D Swoo_1725 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D Swoo_1724 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Swoo_1735 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Swoo_4386 arsenical-resistance protein K03325 ACR3; arsenite transporter D Swoo_3951 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D Swoo_3952 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Swoo_3953 NADH dehydrogenase (quinone) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Swoo_3954 NADH dehydrogenase (quinone) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Swoo_3956 NADH dehydrogenase (quinone) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Swoo_3948 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Swoo_3949 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Swoo_3950 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Swoo_1289 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Swoo_1659 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase D Swoo_3358 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins D Swoo_2174 Lysine exporter protein (LYSE/YGGA) K06895 lysE; L-lysine exporter family protein LysE/ArgO D Swoo_2668 lysine exporter protein (LysE/YggA) K06895 lysE; L-lysine exporter family protein LysE/ArgO D Swoo_1931 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein D Swoo_4833 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein D Swoo_2796 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein D Swoo_3991 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein D Swoo_3139 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D Swoo_3140 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D Swoo_2171 protein of unknown function UPF0118 K03548 perM; putative permease D Swoo_0091 conserved hypothetical integral membrane protein K09125 yhhQ; queuosine precursor transporter D Swoo_2242 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D Swoo_4534 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Swoo_3880 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Swoo_3075 TonB family protein K03832 tonB; periplasmic protein TonB D Swoo_4005 TonB family protein K03832 tonB; periplasmic protein TonB D Swoo_0245 TonB family protein K03832 tonB; periplasmic protein TonB D Swoo_2730 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D Swoo_2732 protein TolA K03646 tolA; colicin import membrane protein D Swoo_2731 Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D Swoo_1741 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Swoo_3335 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Swoo_3336 oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Swoo_1740 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Swoo_3337 sodium pump decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D Swoo_3005 cytochrome c biogenesis protein transmembrane region K08344 scsB; suppressor for copper-sensitivity B D Swoo_2634 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D Swoo_2633 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D Swoo_2631 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D Swoo_0233 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D Swoo_0234 dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D Swoo_3526 trimethylamine-N-oxide reductase TorA K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D Swoo_3525 trimethylamine-N-oxide reductase c-type cytochrome TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D Swoo_3527 cytoplasmic chaperone TorD family protein K03533 torD; TorA specific chaperone D Swoo_4521 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system D Swoo_0666 biotin/lipoyl attachment domain-containing protein K15727 czcB; membrane fusion protein, heavy metal efflux system D Swoo_0555 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D Swoo_0190 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Swoo_0475 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system D Swoo_3808 secretion protein HlyD family protein K13408 cvaA; membrane fusion protein D Swoo_0131 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1356 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_2179 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_0466 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1830 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1365 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_0891 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D Swoo_1888 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D Swoo_3123 FeoA family protein K04758 feoA; ferrous iron transport protein A D Swoo_3122 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Swoo_4478 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D Swoo_4656 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D Swoo_1032 MltA-interacting MipA family protein K07274 mipA; MipA family protein D Swoo_3975 MltA-interacting MipA family protein K07274 mipA; MipA family protein D Swoo_0775 MltA-interacting MipA family protein K07274 mipA; MipA family protein D Swoo_3980 MltA-interacting MipA family protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:swd02044] D Swoo_4195 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Swoo_0476 type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Swoo_0475 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system D Swoo_0474 type I secretion outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system D Swoo_3808 secretion protein HlyD family protein K13408 cvaA; membrane fusion protein D Swoo_3807 ABC transporter related K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Swoo_1167 Peptidoglycan-binding domain 1 protein K02450 gspA; general secretion pathway protein A D Swoo_1168 general secretion pathway protein B K02451 gspB; general secretion pathway protein B D Swoo_4735 general secretion pathway protein C K02452 gspC; general secretion pathway protein C D Swoo_4734 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D Swoo_4733 general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Swoo_4732 general secretion pathway protein F K02455 gspF; general secretion pathway protein F D Swoo_4731 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Swoo_4730 general secretion pathway protein H K02457 gspH; general secretion pathway protein H D Swoo_4729 general secretion pathway protein I K02458 gspI; general secretion pathway protein I D Swoo_4728 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J D Swoo_4727 General secretion pathway protein K K02460 gspK; general secretion pathway protein K D Swoo_4726 general secretion pathway protein L K02461 gspL; general secretion pathway protein L D Swoo_4725 General secretion pathway M protein K02462 gspM; general secretion pathway protein M D Swoo_4724 type II secretion system protein N K02463 gspN; general secretion pathway protein N D Swoo_0303 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Swoo_0314 General secretion pathway protein K02650 pilA; type IV pilus assembly protein PilA D Swoo_0313 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Swoo_0312 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Swoo_1299 Type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE D Swoo_1542 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D Swoo_0335 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Swoo_0336 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Swoo_0337 Pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D Swoo_0338 Pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D Swoo_0339 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D Swoo_1333 twitching motility protein K02669 pilT; twitching motility protein PilT D Swoo_1334 twitching motility protein K02670 pilU; twitching motility protein PilU D Swoo_1295 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D Swoo_1296 type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D Swoo_1297 type IV pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX D Swoo_1367 undecaprenol kinase, rRNA (guanine-N(1)-)-methyltransferase K02674 pilY1; type IV pilus assembly protein PilY1 D Swoo_1298 type IV pilin biogenesis protein, putative K02674 pilY1; type IV pilus assembly protein PilY1 D Swoo_1984 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Swoo_1302 type IV pilus biogenesis protein, putative K08084 fimT; type IV fimbrial biogenesis protein FimT D Swoo_1301 type IV pilus biogenesis protein, putative K08085 fimU; type IV fimbrial biogenesis protein FimU D Swoo_2985 conserved hypothetical protein K08086 fimV; pilus assembly protein FimV D Swoo_0603 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Swoo_0750 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D Swoo_0604 conserved hypothetical protein K02279 cpaB; pilus assembly protein CpaB D Swoo_0749 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D Swoo_0605 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D Swoo_0607 conserved hypothetical protein K02282 cpaE; pilus assembly protein CpaE D Swoo_0608 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Swoo_0748 FHA domain containing protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Swoo_0609 type II secretion system protein K12510 tadB; tight adherence protein B D Swoo_0747 type II secretion system protein K12510 tadB; tight adherence protein B D Swoo_0610 type II secretion system protein K12511 tadC; tight adherence protein C D Swoo_0746 type II secretion system protein K12511 tadC; tight adherence protein C D Swoo_0611 TPR repeat-containing protein K12512 tadD; tight adherence protein D D Swoo_0612 TadE family protein K12513 tadE; tight adherence protein E D Swoo_0613 conserved hypothetical protein K12514 tadF; tight adherence protein F D Swoo_0614 conserved hypothetical protein K12515 tadG; tight adherence protein G D Swoo_0602 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA D Swoo_4410 methylation site containing protein K10924 mshA; MSHA pilin protein MshA D Swoo_4409 methylation site containing protein K10924 mshA; MSHA pilin protein MshA D Swoo_4408 MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA D Swoo_3821 conserved hypothetical protein K10924 mshA; MSHA pilin protein MshA D Swoo_3230 methylation site containing protein K10924 mshA; MSHA pilin protein MshA D Swoo_4411 methylation site containing protein K10925 mshB; MSHA pilin protein MshB D Swoo_0580 conserved hypothetical protein K10925 mshB; MSHA pilin protein MshB D Swoo_3989 pilin, putative K10925 mshB; MSHA pilin protein MshB D Swoo_4407 MSHA pilin protein MshC K10926 mshC; MSHA pilin protein MshC D Swoo_4406 methylation site containing protein K10927 mshD; MSHA pilin protein MshD D Swoo_4414 type II secretion system protein E K12276 mshE; MSHA biogenesis protein MshE D Swoo_4413 type II secretion system protein K12278 mshG; MSHA biogenesis protein MshG D Swoo_4421 conserved hypothetical biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI D Swoo_4419 MSHA biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ D Swoo_4418 MSHA biogenesis protein MshK K12281 mshK; MSHA biogenesis protein MshK D Swoo_4417 pilus (MSHA type) biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL D Swoo_4416 MSHA biogenesis protein MshM K12283 mshM; MSHA biogenesis protein MshM D Swoo_4415 Tetratricopeptide TPR_2 repeat protein K12284 mshN; MSHA biogenesis protein MshN D Swoo_4405 methylation site containing protein K12285 mshO; MSHA biogenesis protein MshO D Swoo_4404 MSHA biogenesis protein MshP K12286 mshP; MSHA biogenesis protein MshP D Swoo_4403 conserved hypothetical protein K12287 mshQ; MSHA biogenesis protein MshQ D Swoo_1330 protein of unknown function YGGT K02221 yggT; YggT family protein D Swoo_3093 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D Swoo_3945 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Swoo_1818 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Swoo_1632 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Swoo_1631 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Swoo_1645 FlhB domain protein K04061 flhB2; flagellar biosynthesis protein D Swoo_1618 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Swoo_1620 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Swoo_1621 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Swoo_1626 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Swoo_1627 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D Swoo_1628 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Swoo_1629 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Swoo_1630 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Swoo_0896 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Swoo_2516 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D Swoo_2521 conserved hypothetical protein K11892 impK; type VI secretion system protein ImpK D Swoo_2522 type VI secretion protein, VC_A0114 family K11893 impJ; type VI secretion system protein ImpJ D Swoo_2525 type VI secretion protein, VC_A0111 family K11895 impH; type VI secretion system protein ImpH D Swoo_2526 type VI secretion protein, VC_A0110 family K11896 impG; type VI secretion system protein ImpG D Swoo_2528 type VI secretion protein, EvpB/VC_A0108 family K11900 impC; type VI secretion system protein ImpC D Swoo_2529 type VI secretion protein, VC_A0107 family K11901 impB; type VI secretion system protein ImpB D Swoo_2514 type VI secretion system effector, Hcp1 family K11903 hcp; type VI secretion system secreted protein Hcp D Swoo_2513 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG D Swoo_2527 type VI secretion system lysozyme-related protein K11905 K11905; type VI secretion system protein D Swoo_2523 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD D Swoo_2520 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG D Swoo_2517 type VI secretion-associated protein, VC_A0119 family K11910 vasJ; type VI secretion system protein VasJ D Swoo_2515 hypothetical protein K11911 vasL; type VI secretion system protein VasL D Swoo_2524 FHA domain containing protein K11894 impI; type VI secretion system protein ImpI D Swoo_2518 conserved hypothetical protein K11909 vasI; type VI secretion system protein VasI D Swoo_0646 Curlin associated repeat protein K04335 csgB; minor curlin subunit D Swoo_0642 curli production assembly/transport component CsgF, putative K04338 csgF; curli production assembly/transport component CsgF D Swoo_0643 Curli production assembly/transport component CsgG K06214 csgG; curli production assembly/transport component CsgG D Swoo_4525 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Swoo_4875 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Swoo_1758 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Swoo_3572 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Swoo_4703 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Swoo_1759 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Swoo_3571 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Swoo_3564 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Swoo_4670 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Swoo_1253 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Swoo_0201 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Swoo_1757 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Swoo_4929 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Swoo_0524 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Swoo_0523 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB D Swoo_0522 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:swd02042] D Swoo_2874 C4-dicarboxylate transporter/malic acid transport protein K11041 eta; exfoliative toxin A/B D Swoo_1540 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Swoo_1251 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Swoo_1075 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Swoo_2594 channel protein, hemolysin III family K11068 hlyIII; hemolysin III D Swoo_0042 Microbial collagenase K01387 colA; microbial collagenase [EC:3.4.24.3] D Swoo_0648 Microbial collagenase K01387 colA; microbial collagenase [EC:3.4.24.3] C 02022 Two-component system [BR:swd02022] D Swoo_3451 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Swoo_3452 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Swoo_3381 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Swoo_2805 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Swoo_2804 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Swoo_3380 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Swoo_0149 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Swoo_0150 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Swoo_0280 integral membrane sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Swoo_0281 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Swoo_2294 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Swoo_3963 integral membrane sensor signal transduction histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D Swoo_3962 two component transcriptional regulator, winged helix family K07664 baeR; two-component system, OmpR family, response regulator BaeR D Swoo_3532 multi-sensor hybrid histidine kinase K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3] D Swoo_3534 two component transcriptional regulator, winged helix family K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D Swoo_3762 two component transcriptional regulator, winged helix family K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D Swoo_3977 integral membrane sensor signal transduction histidine kinase K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D Swoo_3919 integral membrane sensor signal transduction histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D Swoo_3920 two component transcriptional regulator, winged helix family K19610 pfeR; two-component system, OmpR family, response regulator PfeR D Swoo_1029 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Swoo_3978 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Swoo_2122 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Swoo_4783 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Swoo_1030 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Swoo_0660 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Swoo_2636 integral membrane sensor signal transduction histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Swoo_2637 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Swoo_3747 two component transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Swoo_0971 integral membrane sensor signal transduction histidine kinase K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D Swoo_0970 two component transcriptional regulator, LuxR family K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D Swoo_3355 multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Swoo_2150 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Swoo_4590 integral membrane sensor signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D Swoo_4591 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR D Swoo_3748 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D Swoo_1766 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Swoo_4381 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Swoo_1765 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D Swoo_4382 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D Swoo_4846 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D Swoo_2437 response regulator receiver protein K02477 K02477; two-component system, LytTR family, response regulator D Swoo_4650 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Swoo_4651 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Swoo_3778 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D Swoo_1723 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D Swoo_1722 two component, sigma54 specific, transcriptional regulator, Fis family K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D Swoo_0089 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Swoo_0166 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Swoo_1638 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Swoo_1636 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_0167 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_4352 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_3051 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_0162 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Swoo_1963 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Swoo_1639 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Swoo_4442 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_1595 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_1944 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_1747 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_1615 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Swoo_1616 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC D Swoo_0589 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Swoo_0590 two component transcriptional regulator, Fis family K15012 regA; two-component system, response regulator RegA D Swoo_2833 histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Swoo_2246 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D Swoo_1874 response regulator with putative antiterminator output domain-like protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator D Swoo_2664 putative PAS/PAC sensor protein K19694 chiS; two-component system, sensor histidine kinase ChiS D Swoo_1704 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Swoo_0829 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Swoo_2979 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Swoo_4322 PAS/PAC sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Swoo_3314 multi-sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:swd02035] D Swoo_0166 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Swoo_1638 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Swoo_1642 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Swoo_1643 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Swoo_0165 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Swoo_4204 CheC domain protein K03409 cheX; chemotaxis protein CheX D Swoo_4342 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Swoo_0163 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Swoo_1962 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Swoo_1596 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Swoo_0162 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Swoo_1963 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Swoo_1639 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Swoo_1636 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_0167 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_4352 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_3051 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Swoo_1637 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ D Swoo_4442 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_1595 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_1944 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_1747 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Swoo_2617 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_4795 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_2814 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_1568 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_2794 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_3958 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0164 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0808 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0252 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0559 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0712 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Swoo_0732 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_1011 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_1310 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_2194 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_2947 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_3399 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_3576 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_3725 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_4441 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Swoo_4186 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D Swoo_3519 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D Swoo_1620 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Swoo_1621 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Swoo_1622 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D Swoo_1627 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D Swoo_1628 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Swoo_1629 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Swoo_1630 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Swoo_1632 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Swoo_1631 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Swoo_1619 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Swoo_1625 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Swoo_1626 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Swoo_1618 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Swoo_1604 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Swoo_1594 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Swoo_1603 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Swoo_4825 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Swoo_1624 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Swoo_1617 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Swoo_1623 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Swoo_1597 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Swoo_1598 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Swoo_1599 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Swoo_1601 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D Swoo_1602 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Swoo_1605 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D Swoo_1600 flagellar basal body FlaE domain protein K02390 flgE; flagellar hook protein FlgE D Swoo_1606 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Swoo_1607 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Swoo_1592 FlgN family protein K02399 flgN; flagellar biosynthesis protein FlgN D Swoo_1591 protein of unknown function DUF400 K09860 flgP; outer membrane protein FlgP D Swoo_4218 Sel1 domain protein repeat-containing protein K21217 motX; sodium-type polar flagellar protein MotX D Swoo_2738 OmpA/MotB domain protein K21218 motY; sodium-type flagellar protein MotY D Swoo_0763 flagellar biosynthesis protein, putative K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D Swoo_1608 flagellin domain protein K02406 fliC; flagellin D Swoo_1609 flagellin domain protein K02406 fliC; flagellin D Swoo_2216 flagellin domain protein K02406 fliC; flagellin D Swoo_1611 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2 D Swoo_1613 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Swoo_1635 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Swoo_3475 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Swoo_3474 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Swoo_1614 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Swoo_1615 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Swoo_1616 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC D Swoo_1593 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D Swoo_1610 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG D Swoo_1633 GTP-binding signal recognition particle SRP54 G-domain K02404 flhF; flagellar biosynthesis protein FlhF D Swoo_1634 Cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D Swoo_1333 twitching motility protein K02669 pilT; twitching motility protein PilT D Swoo_1334 twitching motility protein K02670 pilU; twitching motility protein PilU D Swoo_0314 General secretion pathway protein K02650 pilA; type IV pilus assembly protein PilA D Swoo_0313 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Swoo_0312 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Swoo_0303 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Swoo_1542 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D Swoo_0339 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D Swoo_0338 Pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D Swoo_0337 Pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D Swoo_0336 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Swoo_0335 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Swoo_1984 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Swoo_1295 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D Swoo_1296 type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D Swoo_1297 type IV pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX D Swoo_1367 undecaprenol kinase, rRNA (guanine-N(1)-)-methyltransferase K02674 pilY1; type IV pilus assembly protein PilY1 D Swoo_1298 type IV pilin biogenesis protein, putative K02674 pilY1; type IV pilus assembly protein PilY1 D Swoo_1299 Type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE D Swoo_0602 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA D Swoo_0603 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Swoo_0750 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D Swoo_0604 conserved hypothetical protein K02279 cpaB; pilus assembly protein CpaB D Swoo_0749 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D Swoo_0605 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D Swoo_0607 conserved hypothetical protein K02282 cpaE; pilus assembly protein CpaE D Swoo_0608 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Swoo_0748 FHA domain containing protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:swd04812] D Swoo_1057 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein D Swoo_4402 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Swoo_4529 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Swoo_4530 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Swoo_2114 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Swoo_2113 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Swoo_4628 hypothetical protein K03609 minD; septum site-determining protein MinD D Swoo_2112 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Swoo_1769 conserved hypothetical protein K03496 parA; chromosome partitioning protein D Swoo_1641 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Swoo_4907 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Swoo_1535 conserved hypothetical protein K03496 parA; chromosome partitioning protein D Swoo_4906 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:swd04147] D Swoo_1796 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Swoo_3350 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Swoo_2393 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Swoo_2395 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Swoo_0878 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Swoo_2541 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Swoo_3642 peptidyl-prolyl cis-trans isomerase cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Swoo_0957 peptidyl-prolyl cis-trans isomerase cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Swoo_0814 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Swoo_2741 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Swoo_1084 band 7 protein K07192 FLOT; flotillin D Swoo_4308 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Swoo_3583 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Swoo_1279 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Swoo_3769 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D Swoo_3940 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D Swoo_1559 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Swoo_4704 translation elongation factor Tu K02358 tuf; elongation factor Tu D Swoo_4692 translation elongation factor Tu K02358 tuf; elongation factor Tu D Swoo_1883 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Swoo_2110 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_3995 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2941 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2409 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_4860 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_2322 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_4587 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Swoo_3202 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Swoo_2544 Peptidyl-dipeptidase A K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D Swoo_1798 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Swoo_1792 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Swoo_0333 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Swoo_0332 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Swoo_3770 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Swoo_2085 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Swoo_0652 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Swoo_3662 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Swoo_4544 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Swoo_4643 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_1130 Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_2101 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Swoo_0518 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Swoo_1932 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Swoo_1716 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Swoo_1350 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_4136 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_1207 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_1349 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_3889 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Swoo_0296 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Swoo_0321 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Swoo_3235 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Swoo_2539 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Swoo_3565 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:swd02048] D Swoo_0503 EcoEI R domain protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Swoo_0501 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Swoo_0502 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Swoo_0343 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Swoo_4919 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Swoo_0304 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] D Swoo_0305 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Swoo_4571 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Swoo_0495 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Swoo_0497 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Swoo_4573 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Swoo_0496 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Swoo_4574 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Swoo_3098 phage shock protein C, PspC K03973 pspC; phage shock protein C D Swoo_3099 phage shock protein B K03970 pspB; phage shock protein B D Swoo_4529 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Swoo_4402 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Swoo_4188 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Swoo_4190 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Swoo_1728 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Swoo_1235 conserved hypothetical protein K19168 cptA; toxin CptA D Swoo_1234 protein of unknown function DUF339 K09159 cptB; antitoxin CptB D Swoo_1776 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Swoo_0566 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:swd04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:swd04090] D Swoo_3769 peptidase S9B dipeptidylpeptidase IV domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D Swoo_2544 Peptidyl-dipeptidase A K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] C 01504 Antimicrobial resistance genes [BR:swd01504] D Swoo_3234 Na+/H+ antiporter NhaC K18218 tet35; tetracycline resistance efflux pump D Swoo_3738 TonB family protein K02172 blaR1; bla regulator protein blaR1 D Swoo_3737 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Swoo_3977 integral membrane sensor signal transduction histidine kinase K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3] D Swoo_3381 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Swoo_2805 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Swoo_2804 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Swoo_3380 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP D Swoo_0131 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1356 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_2179 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_0466 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1830 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1365 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_0132 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump D Swoo_2180 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Swoo_0465 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Swoo_1357 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump D Swoo_1571 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D Swoo_1569 acriflavin resistance protein K18303 mexK; multidrug efflux pump D Swoo_3192 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Swoo_4195 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:swd00536] D Swoo_1481 hypothetical protein K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:swd00537] D Swoo_1350 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_4136 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_1207 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_1349 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Swoo_0814 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:swd03100] D Swoo_R0097 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Swoo_R0159 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Swoo_R0148 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Swoo_R0035 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Swoo_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Swoo_R0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0025 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0102 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0107 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0112 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0109 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0108 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0113 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0114 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0115 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Swoo_R0074 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0075 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0077 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0073 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0081 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0078 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0079 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0076 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0080 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Swoo_R0004 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Swoo_R0162 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Swoo_R0083 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Swoo_R0094 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Swoo_R0082 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Swoo_R0051 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Swoo_R0053 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Swoo_R0057 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Swoo_R0119 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Swoo_R0121 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Swoo_R0126 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Swoo_R0123 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Swoo_R0036 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0040 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0038 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0039 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0044 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0041 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0042 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0045 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0046 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0037 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Swoo_R0050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0136 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0138 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0137 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0056 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0139 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0154 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Swoo_R0015 tRNA-His K14226 tRNA-His; tRNA His D Swoo_R0101 tRNA-His K14226 tRNA-His; tRNA His D Swoo_R0098 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Swoo_R0149 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Swoo_R0160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Swoo_R0135 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0122 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0120 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0127 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0124 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0052 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0058 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0118 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Swoo_R0084 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0091 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0085 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0089 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0086 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0088 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0092 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0090 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0087 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Swoo_R0125 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0128 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0018 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0061 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0062 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0063 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0064 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0065 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0067 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0117 tRNA-Met K14230 tRNA-Met; tRNA Met D Swoo_R0020 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Swoo_R0023 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Swoo_R0133 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Swoo_R0016 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Swoo_R0017 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Swoo_R0103 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Swoo_R0093 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Swoo_R0106 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0116 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0111 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0048 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0049 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0140 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0059 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Swoo_R0145 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Swoo_R0019 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Swoo_R0022 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Swoo_R0156 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Swoo_R0129 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Swoo_R0069 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Swoo_R0070 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Swoo_R0071 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Swoo_R0155 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Swoo_R0072 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Swoo_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0027 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0028 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0029 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0033 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0034 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0031 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0032 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0030 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0060 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0066 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0068 tRNA-Val K14237 tRNA-Val; tRNA Val D Swoo_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0132 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0099 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0153 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0143 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0161 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0165 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Swoo_R0142 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0147 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0152 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0158 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0131 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0096 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0164 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Swoo_R0144 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0141 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0151 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0130 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0163 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0095 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0157 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0146 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Swoo_R0100 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Swoo_R0013 RNA component of RNaseP K01978 rnpB; M1 RNA D Swoo_R0024 ssrA; tmRNA as predicted by Rfam (RF00023), score 195.47 K15035 ssrA; transfer-messenger RNA D Swoo_R0105 CsrB RNA K18515 csrB; small regulatory RNA CsrB D Swoo_R0005 Spot 42 RNA K18527 spf; small regulatory RNA Spot 42 # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Swoo_3156 3-beta hydroxysteroid dehydrogenase/isomerase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412] D Swoo_2931 Pyruvate dehydrogenase (acetyl-transferring) K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D Swoo_2932 Transketolase central region K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D Swoo_4064 Aldehyde Dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D Swoo_4385 glyceraldehyde-3-phosphate dehydrogenase, type I K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D Swoo_2300 NADH:flavin oxidoreductase/NADH oxidase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D Swoo_2943 NADH:flavin oxidoreductase/NADH oxidase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D Swoo_2251 coenzyme PQQ biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D Swoo_2950 (2Fe-2S)-binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D Swoo_2949 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D Swoo_4794 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D Swoo_0649 NAD(P)H quinone oxidoreductase, PIG3 family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Swoo_1047 NADPH-dependent FMN reductase K03206 azr; azobenzene reductase [EC:1.7.1.6] D Swoo_0929 alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D Swoo_2276 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Swoo_0822 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Swoo_0826 Methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Swoo_2441 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Swoo_3914 Glutathione S-transferase domain K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D Swoo_3435 Glutathione S-transferase domain K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D Swoo_2451 glutathione S-transferase-like protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D Swoo_2450 Glutathione S-transferase domain K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D Swoo_2619 oxidoreductase molybdopterin binding K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D Swoo_0005 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D Swoo_2378 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D Swoo_0540 di-haem cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D Swoo_1935 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D Swoo_3904 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D Swoo_2175 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Swoo_0782 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Swoo_0928 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Swoo_1516 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D Swoo_1000 Dyp-type peroxidase family K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D Swoo_4822 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Swoo_0685 globin K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D Swoo_1068 superoxide dismutase, Ni K00518 sodN; nickel superoxide dismutase [EC:1.15.1.1] D Swoo_4766 Ferroxidase K02217 ftnA; ferritin [EC:1.16.3.2] D Swoo_0993 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Swoo_2168 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D Swoo_2249 coenzyme PQQ biosynthesis protein E K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D Swoo_3048 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D Swoo_0270 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Swoo_2884 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Swoo_1058 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Swoo_1261 ferredoxin K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-] D Swoo_3344 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Swoo_2772 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D Swoo_4806 Coproporphyrinogen dehydrogenase K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350] D Swoo_3397 Coproporphyrinogen dehydrogenase K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350] D Swoo_2025 hypothetical protein K05303 K05303; O-methyltransferase [EC:2.1.1.-] D Swoo_3590 hexapeptide-repeat containing-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D Swoo_3700 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Swoo_0861 transcriptional regulator, MarR family with acetyltransferase activity K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D Swoo_1831 GCN5-related N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-] D Swoo_1538 GCN5-related N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-] D Swoo_2696 Leucyltransferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D Swoo_2625 transglutaminase domain protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D Swoo_2697 Arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D Swoo_3159 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20] D Swoo_2330 DTW domain containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D Swoo_2595 DTW domain containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D Swoo_0255 DTW domain containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D Swoo_3859 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Swoo_3611 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Swoo_3407 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Swoo_2716 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D Swoo_0727 (Glutamate--ammonia-ligase) adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D Swoo_4493 diguanylate cyclase K18967 dge1; diguanylate cyclase [EC:2.7.7.65] D Swoo_0823 protein of unknown function UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D Swoo_4155 serine/threonine protein kinase K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1] D Swoo_1752 Arylsulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22] D Swoo_0499 conserved hypothetical protein K20993 estP; pyrethroid hydrolase [EC:3.1.1.88] D Swoo_4603 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Swoo_4857 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Swoo_4859 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Swoo_2735 tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Swoo_3509 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Swoo_2911 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Swoo_3020 phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Swoo_3823 response regulator receiver modulated metal dependent phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Swoo_3313 response regulator receiver modulated metal dependent phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Swoo_2978 response regulator receiver modulated metal dependent phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Swoo_2918 metal dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Swoo_0146 metal dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Swoo_0100 metal dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Swoo_3302 beta-lactamase domain protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D Swoo_4267 beta-lactamase domain protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D Swoo_3651 sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-] D Swoo_4133 Deoxyribonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D Swoo_0520 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Swoo_1985 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Swoo_3552 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Swoo_2273 alpha/beta hydrolase fold K01175 ybfF; esterase [EC:3.1.-.-] D Swoo_2207 alpha amylase catalytic region K21575 susA; neopullulanase [EC:3.2.1.135] D Swoo_2719 glycoside hydrolase family 18 K21606 endo_I; endo-chitodextinase [EC:3.2.1.202] D Swoo_3252 N-acyl-D-amino-acid deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D Swoo_0038 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Swoo_2597 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Swoo_0136 peptidase S45 penicillin amidase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D Swoo_4312 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Swoo_0564 polysaccharide deacetylase K18454 deaA; chitin disaccharide deacetylase [EC:3.5.1.105] D Swoo_4396 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D Swoo_2005 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D Swoo_3436 protein of unknown function DUF437 K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135] D Swoo_1583 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D Swoo_0630 LmbE family protein K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-] D Swoo_0812 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Swoo_0106 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Swoo_0718 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25] D Swoo_2036 maf protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D Swoo_2623 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Swoo_3028 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Swoo_3158 alpha/beta hydrolase fold K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114] D Swoo_4175 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Swoo_0105 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D Swoo_0211 Phenylacetaldoxime dehydratase K13028 oxdA; aliphatic aldoxime dehydratase [EC:4.8.1.2] D Swoo_1971 peptidylprolyl isomerase FKBP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D Swoo_3157 AMP-dependent synthetase and ligase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1] D Swoo_3820 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D Swoo_1990 ATP dependent DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D Swoo_2559 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Swoo_2558 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Swoo_2557 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Swoo_3405 NADH:ubiquinone oxidoreductase, subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D Swoo_3617 NADH:ubiquinone oxidoreductase, subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D Swoo_3404 NADH:ubiquinone oxidoreductase, subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D Swoo_3616 NADH:ubiquinone oxidoreductase, subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D Swoo_3403 NADH:ubiquinone oxidoreductase, subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D Swoo_3615 NADH:ubiquinone oxidoreductase, subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D Swoo_3402 NADH:ubiquinone oxidoreductase, subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D Swoo_3614 NADH:ubiquinone oxidoreductase, subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D Swoo_3613 NADH:ubiquinone oxidoreductase, subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D Swoo_3401 NADH:ubiquinone oxidoreductase, subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D Swoo_3400 NADH:ubiquinone oxidoreductase, subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D Swoo_3612 NADH:ubiquinone oxidoreductase, subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D Swoo_2334 oxidoreductase FAD/NAD(P)-binding domain protein K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D Swoo_2420 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism D Swoo_3797 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D Swoo_3533 TMAO reductase system periplasmic protein TorT K11930 torT; periplasmic protein TorT D Swoo_3522 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D Swoo_4819 formate dehydrogenase subunit FdhD K02379 fdhD; FdhD protein D Swoo_1781 ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S D Swoo_2017 hypothetical protein K05337 fer; ferredoxin D Swoo_3413 4Fe-4S ferredoxin iron-sulfur binding domain protein K05524 fdxA; ferredoxin D Swoo_2301 ferredoxin K11107 yfaE; ferredoxin D Swoo_2560 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Swoo_2561 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Swoo_2556 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Swoo_4910 flavodoxin/nitric oxide synthase K06205 mioC; MioC protein D Swoo_1777 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D Swoo_4109 NapD family protein K02570 napD; periplasmic nitrate reductase NapD D Swoo_2681 NapD family protein K02570 napD; periplasmic nitrate reductase NapD D Swoo_1712 ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF D Swoo_3524 trimethylamine N-oxide reductase system, TorE protein K02571 napE; periplasmic nitrate reductase NapE D Swoo_2682 periplasmic nitrate reductase NapE K02571 napE; periplasmic nitrate reductase NapE D Swoo_4453 tetratricopeptide TPR_2 repeat protein K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG D Swoo_4474 conserved hypothetical protein K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG D Swoo_2270 flavodoxin K03839 fldA; flavodoxin I D Swoo_2678 periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family K02569 napC; cytochrome c-type protein NapC D Swoo_4756 NapC/NirT cytochrome c domain protein K02569 napC; cytochrome c-type protein NapC D Swoo_3236 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Swoo_0240 formate-dependent nitrite reductase K04013 nrfB; cytochrome c-type protein NrfB D Swoo_0241 4Fe-4S ferredoxin iron-sulfur binding domain protein K04014 nrfC; protein NrfC D Swoo_4452 4Fe-4S ferredoxin iron-sulfur binding domain protein K04014 nrfC; protein NrfC D Swoo_4473 4Fe-4S ferredoxin iron-sulfur binding domain protein K04014 nrfC; protein NrfC D Swoo_0242 cytochrome c nitrite reductase, NrfD subunit K04015 nrfD; protein NrfD D Swoo_4451 Polysulphide reductase NrfD K04015 nrfD; protein NrfD D Swoo_4472 Polysulphide reductase NrfD K04015 nrfD; protein NrfD D Swoo_2992 protein of unknown function DUF1458 K09165 K09165; dodecin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Swoo_2850 protein of unknown function DUF540 K06203 cysZ; CysZ protein D Swoo_1332 alanine racemase domain protein K06997 yggS; PLP dependent protein D Swoo_1895 GCN5-related N-acetyltransferase K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D Swoo_2313 protein of unknown function DUF1049 K08992 lapA; lipopolysaccharide assembly protein A D Swoo_2314 Tetratricopeptide domain protein K19804 lapB; lipopolysaccharide assembly protein B D Swoo_0075 glycosyl transferase family 25 K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism D Swoo_0480 HemY domain protein K02498 hemY; HemY protein D Swoo_0525 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D Swoo_0526 Sterol-binding domain protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D Swoo_0464 protein of unknown function DUF526 K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D Swoo_3515 Sterol-binding domain protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D Swoo_0134 AbgT putative transporter K12942 abgT; aminobenzoyl-glutamate transport protein D Swoo_3673 AbgT putative transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D Swoo_3754 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D Swoo_1517 DoxX family protein K15977 K15977; putative oxidoreductase D Swoo_1950 Carboxylesterase K06999 K06999; phospholipase/carboxylesterase D Swoo_2530 GCN5-related N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D Swoo_2095 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Swoo_1358 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Swoo_2701 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Swoo_2052 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Swoo_0286 regulator of RpoD, Rsd/AlgQ K07740 rsd; regulator of sigma D D Swoo_1181 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2 D Swoo_0979 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2 D Swoo_0153 RNA binding S1 domain protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D Swoo_0867 protein of unknown function DUF306 Meta and HslJ K03668 hslJ; heat shock protein HslJ D Swoo_2700 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D Swoo_3114 trigger factor K03545 tig; trigger factor D Swoo_2618 Ferric reductase domain protein transmembrane component domain K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D Swoo_1520 SsrA-binding protein K03664 smpB; SsrA-binding protein D Swoo_0410 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D Swoo_0453 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D Swoo_2644 conserved hypothetical protein K07396 K07396; putative protein-disulfide isomerase D Swoo_0159 IscR-regulated protein YhgI K07400 nfuA; Fe/S biogenesis protein NfuA D Swoo_2952 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D Swoo_2600 Methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D Swoo_3460 5'-3' exonuclease K01146 xni; protein Xni D Swoo_4561 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Swoo_2620 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC D Swoo_0597 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D Swoo_0351 protein of unknown function UPF0102 K07460 yraN; putative endonuclease D Swoo_4762 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease D Swoo_0040 DNA protecting protein DprA K04096 smf; DNA processing protein D Swoo_2481 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Swoo_0043 DNA topoisomerase type IA zn finger domain protein K07479 yrdD; putative DNA topoisomerase D Swoo_2646 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase D Swoo_3683 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase D Swoo_0388 transposase IS111A/IS1328/IS1533 K07486 K07486; transposase D Swoo_3496 transposase IS111A/IS1328/IS1533 K07486 K07486; transposase D Swoo_2289 transposase IS111A/IS1328/IS1533 K07486 K07486; transposase D Swoo_1484 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase D Swoo_2752 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Swoo_0470 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Swoo_3987 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Swoo_3775 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Swoo_2737 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Swoo_2692 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Swoo_2564 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Swoo_2237 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Swoo_1034 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Swoo_1672 transposase IS3/IS911 family protein K07497 K07497; putative transposase D Swoo_2161 transposase K07497 K07497; putative transposase D Swoo_3467 transposase K07497 K07497; putative transposase D Swoo_3827 hypothetical protein K07497 K07497; putative transposase D Swoo_0059 transposase K07497 K07497; putative transposase D Swoo_3334 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Swoo_3100 phage shock protein A, PspA K03969 pspA; phage shock protein A D Swoo_3040 Rhodanese domain protein K03972 pspE; phage shock protein E D Swoo_1794 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Swoo_1146 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Swoo_4367 major facilitator superfamily MFS_1 K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Swoo_2346 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Swoo_1829 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Swoo_1828 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Swoo_4104 choline/carnitine/betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D Swoo_1649 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D Swoo_4484 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D Swoo_2598 major facilitator superfamily MFS_1 K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D Swoo_0716 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Swoo_3840 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family D Swoo_2086 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family D Swoo_0460 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Swoo_1411 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Swoo_3649 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Swoo_4913 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Swoo_1283 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Swoo_4364 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Swoo_3785 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Swoo_0894 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D Swoo_3551 nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D Swoo_2675 Na+ dependent nucleoside transporter domain protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family D Swoo_3189 nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D Swoo_3885 Na+ dependent nucleoside transporter domain protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family D Swoo_4915 nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D Swoo_4738 YidE/YbjL duplication K07085 K07085; putative transport protein C 99978 Cell growth D Swoo_2925 intracellular septation protein A K06190 ispZ; intracellular septation protein D Swoo_0492 protein of unknown function DUF542 ScdA domain protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D Swoo_1071 AAA ATPase central domain protein K06413 spoVK; stage V sporulation protein K D Swoo_2156 SpoVR family protein K06415 spoVR; stage V sporulation protein R D Swoo_4878 peptidase M23B K22719 envC; murein hydrolase activator C 99993 Cell motility D Swoo_0964 membrane lipoprotein lipid attachment site K07337 K07337; penicillin-binding protein activator D Swoo_3851 membrane lipoprotein lipid attachment site K07337 K07337; penicillin-binding protein activator C 99995 Signaling proteins D Swoo_0317 signaling modulator of AmpD, AmpE K03807 ampE; AmpE protein D Swoo_2132 ProQ activator of osmoprotectant transporter ProP K03607 proQ; ProP effector D Swoo_1452 UspA domain protein K06149 uspA; universal stress protein A D Swoo_4060 UspA domain protein K06149 uspA; universal stress protein A D Swoo_2416 UspA domain protein K14055 uspE; universal stress protein E D Swoo_1041 UspA domain protein K14055 uspE; universal stress protein E D Swoo_1764 carbon starvation protein CstA K06200 cstA; carbon starvation protein D Swoo_4642 GTP-binding protein TypA K06207 typA; GTP-binding protein D Swoo_2779 anti-ECFsigma factor, ChrR K07167 chrR; putative transcriptional regulator D Swoo_2629 HPP family protein? K07168 K07168; CBS domain-containing membrane protein D Swoo_0958 CBS domain containing membrane protein K07168 K07168; CBS domain-containing membrane protein D Swoo_3697 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Swoo_4323 PhoH family protein K07175 phoH2; PhoH-like ATPase D Swoo_2158 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase D Swoo_2835 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase K07182 K07182; CBS domain-containing protein D Swoo_0715 SH3 type 3 domain protein K07184 ygiM; SH3 domain protein D Swoo_3545 membrane protein K07186 smp; membrane protein D Swoo_3646 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D Swoo_2482 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D Swoo_3687 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D Swoo_1647 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D Swoo_2695 17 kDa surface antigen K06077 slyB; outer membrane lipoprotein SlyB D Swoo_3272 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein D Swoo_3343 peptidase M23B K06194 nlpD; lipoprotein NlpD D Swoo_3555 TPR repeat-containing protein K05803 nlpI; lipoprotein NlpI D Swoo_3207 OmpW family protein K07275 ompW; outer membrane protein D Swoo_4213 protein of unknown function DUF481 K07283 ydiY; putative salt-induced outer membrane protein D Swoo_0880 protein of unknown function DUF481 K07283 ydiY; putative salt-induced outer membrane protein D Swoo_3641 Uncharacterized lipoprotein K07286 yajG; uncharacterized lipoprotein D Swoo_2614 AsmA family protein K07289 asmA; AsmA protein D Swoo_4393 secretion protein HlyD family protein K01993 ABC-2.TX; HlyD family secretion protein D Swoo_4361 secretion protein HlyD family protein K01993 ABC-2.TX; HlyD family secretion protein D Swoo_4850 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Swoo_4074 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Swoo_1901 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein D Swoo_1902 membrane-fusion protein K02005 ABC.CD.TX; HlyD family secretion protein D Swoo_2891 protein of unknown function UPF0118 K11744 tqsA; AI-2 transport protein TqsA D Swoo_0463 Inner membrane CreD family protein K06143 creD; inner membrane protein D Swoo_4663 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE D Swoo_4654 cytochrome c nitrite reductase, accessory protein NrfF K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Swoo_4657 cytochrome c-type biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Swoo_1543 conserved hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D Swoo_3165 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Swoo_4187 BFD domain protein (2Fe-2S)-binding domain protein K02192 bfd; bacterioferritin-associated ferredoxin D Swoo_4157 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D Swoo_1013 ApaG domain protein K06195 apaG; ApaG protein D Swoo_0485 iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D Swoo_4470 periplasmic copper-binding K07218 nosD; nitrous oxidase accessory protein D Swoo_4449 Carbohydrate-binding and sugar hydrolysis K07218 nosD; nitrous oxidase accessory protein D Swoo_4820 DNA binding domain protein, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein D Swoo_4003 protein of unknown function DUF1008 K07227 chuX; heme iron utilization protein D Swoo_0791 putative lipoprotein K07231 K07231; putative iron-regulated protein D Swoo_0686 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO D Swoo_4450 NosL family protein K19342 nosL; copper chaperone NosL D Swoo_4471 NosL family protein K19342 nosL; copper chaperone NosL B B 09194 Poorly characterized C 99996 General function prediction only D Swoo_2981 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D Swoo_2413 Bax protein, putative K03796 bax; Bax protein D Swoo_0417 BAX protein K03796 bax; Bax protein D Swoo_0422 BAX protein K03796 bax; Bax protein D Swoo_2074 Mammalian cell entry related domain protein K06192 pqiB; paraquat-inducible protein B D Swoo_4523 GCN5-related N-acetyltransferase K02348 elaA; ElaA protein D Swoo_0225 regulatory PhaM protein K02617 paaY; phenylacetic acid degradation protein D Swoo_1706 PHP domain protein K04477 ycdX; putative hydrolase D Swoo_2252 coenzyme PQQ biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D Swoo_0898 coenzyme PQQ synthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D Swoo_2250 coenzyme PQQ synthesis D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D Swoo_0576 globin K06886 glbN; hemoglobin D Swoo_3906 globin K06886 glbN; hemoglobin D Swoo_0046 globin K06886 glbN; hemoglobin D Swoo_0323 Patatin K07001 K07001; NTE family protein D Swoo_3260 Patatin K07001 K07001; NTE family protein D Swoo_3052 Patatin K07001 K07001; NTE family protein D Swoo_1397 conserved hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily D Swoo_1992 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D Swoo_1203 iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein D Swoo_4618 ribonuclease BN K07058 K07058; membrane protein D Swoo_4156 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA D Swoo_0858 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE D Swoo_1973 Rhodanese domain protein K07146 K07146; UPF0176 protein D Swoo_2706 protein of unknown function DUF489 K07153 hflD; high frequency lysogenization protein D Swoo_0137 LemA family protein K03744 lemA; LemA protein D Swoo_0966 SlyX family protein K03745 slyX; SlyX protein D Swoo_0041 protein of unknown function DUF494 K03747 smg; Smg protein D Swoo_1975 CreA family protein K05805 creA; CreA protein D Swoo_4132 protein of unknown function DUF335 SprT K02742 sprT; SprT protein D Swoo_2982 Sporulation domain protein K03749 dedD; DedD protein D Swoo_0342 Sporulation domain protein K03112 damX; DamX protein D Swoo_2128 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D Swoo_2073 integral membrane protein, PqiA family K03808 pqiA; paraquat-inducible protein A D Swoo_2129 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D Swoo_1107 protein of unknown function DUF368 K08974 K08974; putative membrane protein D Swoo_4033 membrane-flanked domain K08981 K08981; putative membrane protein D Swoo_3888 conserved hypothetical protein K08984 yjdF; putative membrane protein D Swoo_3096 conserved hypothetical protein K08990 ycjF; putative membrane protein D Swoo_0199 protein of unknown function DUF1145 K08993 yhhL; putative membrane protein D Swoo_2546 SEC-C motif domain protein K09858 K09858; SEC-C motif domain protein D Swoo_2470 protein of unknown function DUF306 Meta and HslJ K09914 K09914; putative lipoprotein D Swoo_3205 conserved hypothetical protein K09914 K09914; putative lipoprotein D Swoo_3209 conserved hypothetical protein K09914 K09914; putative lipoprotein D Swoo_0948 Cupin 2 conserved barrel domain protein K11312 K11312; cupin 2 domain-containing protein D Swoo_1771 phosphate-starvation-inducible E K13256 psiE; protein PsiE D Swoo_1443 PhnA protein K06193 phnA; protein PhnA D Swoo_4922 protein of unknown function DUF417 K21741 rclC; reactive chlorine resistance protein C C 99997 Function unknown D Swoo_0764 Ankyrin K06867 K06867; uncharacterized protein D Swoo_3395 Ankyrin K06867 K06867; uncharacterized protein D Swoo_2511 Ankyrin K06867 K06867; uncharacterized protein D Swoo_0951 Ankyrin K06867 K06867; uncharacterized protein D Swoo_0418 Radical SAM domain protein K06871 K06871; uncharacterized protein D Swoo_1679 protein of unknown function DUF255 K06888 K06888; uncharacterized protein D Swoo_0698 peptidase S15 K06889 K06889; uncharacterized protein D Swoo_3097 protein of unknown function DUF463 YcjX family protein K06918 K06918; uncharacterized protein D Swoo_1028 protein of unknown function DUF1289 K06938 K06938; uncharacterized protein D Swoo_3162 protein of unknown function DUF1289 K06938 K06938; uncharacterized protein D Swoo_4882 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Swoo_4057 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Swoo_2774 amine oxidase K06954 K06954; uncharacterized protein D Swoo_4858 conserved hypothetical protein K06975 K06975; uncharacterized protein D Swoo_3765 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein D Swoo_4127 peptidase C39 bacteriocin processing K06992 K06992; uncharacterized protein D Swoo_1112 protein of unknown function DUF861 cupin_3 K06995 K06995; uncharacterized protein D Swoo_2755 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein D Swoo_0188 glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein D Swoo_1191 conserved hypothetical protein K06996 K06996; uncharacterized protein D Swoo_4750 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein D Swoo_3144 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein D Swoo_4191 protein of unknown function UPF0227 K07000 K07000; uncharacterized protein D Swoo_1808 protein of unknown function UPF0227 K07000 K07000; uncharacterized protein D Swoo_3183 exporter of the RND superfamily protein-like protein K07003 K07003; uncharacterized protein D Swoo_2139 conserved hypothetical protein K07003 K07003; uncharacterized protein D Swoo_1911 Endonuclease/exonuclease/phosphatase K07004 K07004; uncharacterized protein D Swoo_3886 Endonuclease/exonuclease/phosphatase K07004 K07004; uncharacterized protein D Swoo_2787 sulfatase K07014 K07014; uncharacterized protein D Swoo_0670 alpha/beta hydrolase fold K07019 K07019; uncharacterized protein D Swoo_3470 dienelactone hydrolase K07020 K07020; uncharacterized protein D Swoo_1050 GPR1/FUN34/yaaH family protein K07034 K07034; uncharacterized protein D Swoo_0679 conserved hypothetical protein K07070 K07070; uncharacterized protein D Swoo_2895 domain of unknown function DUF1731 K07071 K07071; uncharacterized protein D Swoo_1192 conserved hypothetical protein K07074 K07074; uncharacterized protein D Swoo_0846 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Swoo_0298 permease K07089 K07089; uncharacterized protein D Swoo_1498 permease K07089 K07089; uncharacterized protein D Swoo_3908 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Swoo_3087 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Swoo_3065 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Swoo_0620 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Swoo_1229 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Swoo_1308 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Swoo_4460 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Swoo_3998 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Swoo_0963 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Swoo_0960 phosphoribosyltransferase K07101 K07101; uncharacterized protein D Swoo_2347 conserved hypothetical protein K07112 K07112; uncharacterized protein D Swoo_4075 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein D Swoo_4076 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein D Swoo_0352 LppC family lipoprotein K07121 K07121; uncharacterized protein D Swoo_2922 TonB family protein K07126 K07126; uncharacterized protein D Swoo_0249 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein D Swoo_0663 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein D Swoo_0381 conserved hypothetical protein K07136 K07136; uncharacterized protein D Swoo_3412 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein D Swoo_1222 conserved hypothetical radical SAM protein K07139 K07139; uncharacterized protein D Swoo_4097 protein of unknown function DUF405 K07148 K07148; uncharacterized protein D Swoo_2781 conserved hypothetical protein K07157 K07157; uncharacterized protein D Swoo_0571 ATP-dependent protease La (LON) domain protein, putative K07157 K07157; uncharacterized protein D Swoo_4930 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Swoo_0745 protein of unknown function DUF192 K09005 K09005; uncharacterized protein D Swoo_1155 GatB/YqeY domain protein K09117 K09117; uncharacterized protein D Swoo_1329 protein of unknown function DUF167 K09131 K09131; uncharacterized protein D Swoo_1056 AMMECR1 domain protein K09141 K09141; uncharacterized protein D Swoo_3713 protein of unknown function DUF493 K09158 K09158; uncharacterized protein D Swoo_2117 protein of unknown function UPF0153 K09160 K09160; uncharacterized protein D Swoo_4032 membrane-flanked domain K09167 K09167; uncharacterized protein D Swoo_2773 protein of unknown function DUF1365 K09701 K09701; uncharacterized protein D Swoo_4113 protein of unknown function DUF917 K09703 K09703; uncharacterized protein D Swoo_3916 protein of unknown function DUF985 K09705 K09705; uncharacterized protein D Swoo_2193 conserved hypothetical protein K09707 K09707; uncharacterized protein D Swoo_4771 protein of unknown function DUF333 K09712 K09712; uncharacterized protein D Swoo_4141 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Swoo_1444 protein of unknown function DUF188 K09768 K09768; uncharacterized protein D Swoo_2926 YCII-related K09780 K09780; uncharacterized protein D Swoo_0956 protein of unknown function DUF808 K09781 K09781; uncharacterized protein D Swoo_2157 protein of unknown function DUF444 K09786 K09786; uncharacterized protein D Swoo_1791 protein of unknown function DUF454 K09790 K09790; uncharacterized protein D Swoo_1821 protein of unknown function DUF343 K09791 K09791; uncharacterized protein D Swoo_2418 conserved hypothetical protein K09792 K09792; uncharacterized protein D Swoo_0834 conserved hypothetical protein K09794 K09794; uncharacterized protein D Swoo_4510 protein of unknown function DUF465 K09794 K09794; uncharacterized protein D Swoo_3039 protein of unknown function DUF541 K09797 K09797; uncharacterized protein D Swoo_4880 protein of unknown function DUF610 YibQ K09798 K09798; uncharacterized protein D Swoo_1522 protein of unknown function UPF0125 K09801 K09801; uncharacterized protein D Swoo_3826 protein of unknown function DUF541 K09807 K09807; uncharacterized protein D Swoo_3610 protein of unknown function DUF539 K05952 K05952; uncharacterized protein D Swoo_2056 conserved hypothetical protein K00243 K00243; uncharacterized protein D Swoo_2075 protein of unknown function DUF330 K09857 K09857; uncharacterized protein D Swoo_0965 Tetratricopeptide TPR_2 repeat protein K09859 K09859; uncharacterized protein D Swoo_3852 conserved hypothetical protein K09859 K09859; uncharacterized protein D Swoo_1284 protein of unknown function DUF328 K09861 K09861; uncharacterized protein D Swoo_0300 protein of unknown function DUF329 K09862 K09862; uncharacterized protein D Swoo_3356 protein of unknown function DUF416 K09891 K09891; uncharacterized protein D Swoo_0055 protein of unknown function DUF414 K09894 K09894; uncharacterized protein D Swoo_3973 yecA family protein K09895 K09895; uncharacterized protein D Swoo_3669 protein of unknown function DUF413 K09897 K09897; uncharacterized protein D Swoo_0669 protein of unknown function UPF0270 K09898 K09898; uncharacterized protein D Swoo_2885 protein of unknown function DUF412 K09899 K09899; uncharacterized protein D Swoo_2115 protein of unknown function DUF709 K09902 K09902; uncharacterized protein D Swoo_2786 protein of unknown function DUF1414 K09904 K09904; uncharacterized protein D Swoo_2768 protein of unknown function DUF991 K09907 K09907; uncharacterized protein D Swoo_3089 conserved hypothetical protein K09909 K09909; uncharacterized protein D Swoo_2811 conserved hypothetical protein K09909 K09909; uncharacterized protein D Swoo_0969 conserved hypothetical protein K09910 K09910; uncharacterized protein D Swoo_2316 conserved hypothetical protein K09912 K09912; uncharacterized protein D Swoo_2055 protein of unknown function DUF480 K09915 K09915; uncharacterized protein D Swoo_2297 protein of unknown function DUF1315 K09916 K09916; uncharacterized protein D Swoo_2130 YebG family protein K09918 K09918; uncharacterized protein D Swoo_1930 protein of unknown function DUF482 K09919 K09919; uncharacterized protein D Swoo_4193 protein of unknown function DUF1249 K09920 K09920; uncharacterized protein D Swoo_0488 protein of unknown function DUF484 K09921 K09921; uncharacterized protein D Swoo_1321 protein of unknown function DUF469 K09923 K09923; uncharacterized protein D Swoo_2421 conserved hypothetical protein K09926 K09926; uncharacterized protein D Swoo_4914 protein of unknown function DUF1006 K09927 K09927; uncharacterized protein D Swoo_1817 conserved hypothetical protein K09928 K09928; uncharacterized protein D Swoo_1789 conserved hypothetical protein K09929 K09929; uncharacterized protein D Swoo_4775 protein of unknown function DUF692 K09930 K09930; uncharacterized protein D Swoo_4062 protein of unknown function DUF692 K09930 K09930; uncharacterized protein D Swoo_1788 protein of unknown function DUF692 K09930 K09930; uncharacterized protein D Swoo_4220 conserved hypothetical protein K09937 K09937; uncharacterized protein D Swoo_2163 conserved hypothetical protein K09938 K09938; uncharacterized protein D Swoo_4796 conserved hypothetical protein K09940 K09940; uncharacterized protein D Swoo_3180 protein of unknown function DUF1415 K09941 K09941; uncharacterized protein D Swoo_3437 putative periplasmic ligand-binding sensor protein K09945 K09945; uncharacterized protein D Swoo_1536 conserved hypothetical protein K09954 K09954; uncharacterized protein D Swoo_3208 protein of unknown function DUF925 K09962 K09962; uncharacterized protein D Swoo_4343 GumN family protein K09973 K09973; uncharacterized protein D Swoo_4263 protein of unknown function DUF1287 K09974 K09974; uncharacterized protein D Swoo_1912 conserved hypothetical protein K09978 K09978; uncharacterized protein D Swoo_0723 conserved hypothetical protein K09980 K09980; uncharacterized protein D Swoo_3426 hypothetical protein K09981 K09981; uncharacterized protein D Swoo_2713 protein of unknown function DUF1285 K09986 K09986; uncharacterized protein D Swoo_0717 protein of unknown function DUF47 K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 9, 2024