+E Replication protein KO
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DNA Replication Proteins - Shewanella piezotolerans
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D swp_2302 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D swp_3356 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
D swp_0008 Site-specific DNA-methyltransferase (cytosine-specific) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D swp_4504 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D swp_0839 Site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
B DNA Topoisomerases
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D swp_3258 Histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D swp_0535 Histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D swp_3013 Integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D swp_2491 Integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D swp_0015 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D swp_0718 DnaB helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D swp_1112 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D swp_4531 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E swp_3506 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E swp_0016 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E swp_0906 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
E swp_3917 DNA polymerase III, delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E swp_2831 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E swp_2303 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E swp_3319 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E swp_2688 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E swp_1976 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E swp_1716 DNA-directed DNA polymerase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RNase H
E swp_2302 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E swp_3356 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E swp_3507 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E swp_5074 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7]
E swp_1968 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E swp_2302 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E swp_3356 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E swp_3507 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
D swp_2069 N6-adenine-specific DNA methyltransferase, D12 class K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C Prevention of re-replication factors
D swp_2610 SeqA protein K03645 seqA; negative modulator of initiation of replication
D swp_2750 DNA replication factor, putative K10763 hda; DnaA-homolog protein
B DNA Topoisomerases
C swp_2481 DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C swp_0018 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C swp_0770 DNA gyrase, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C swp_0768 DNA gyrase, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C swp_1745 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C swp_3111 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022