+E Transcription factors KO #

  Transcription Factors - Trypanosoma brucei gambiense

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors D TbgDal_X5130 hypothetical protein, unlikely K09066 FIGLA; factor in the germline alpha C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others D TbgDal_XI10200 replication factor A, 51kDa subunit, putative K07466 RFA1; replication factor A1 C Cys2HisCys zinc factors D TbgDal_VII5160 histone acetyltransferase, putative K11304 TIP60; histone acetyltransferase HTATIP [EC:2.3.1.48] D TbgDal_X10120 acetyltransferase, putative K11304 TIP60; histone acetyltransferase HTATIP [EC:2.3.1.48] D TbgDal_III4340 hypothetical protein, conserved K15263 LYER; cell growth-regulating nucleolar protein C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D TbgDal_III1110 cytosine-specific DNA methylase, putative K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers D TbgDal_VII2230 hypothetical protein, conserved K12236 NFX1; transcriptional repressor NF-X1 D TbgDal_X7420 universal minicircle sequence binding protein,putative K09250 CNBP; cellular nucleic acid-binding protein D TbgDal_X7440 predicted zinc finger protein K09250 CNBP; cellular nucleic acid-binding protein B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins D TbgDal_X19550 TFIID-like protein, putative K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein C HMG SOX C HMG TCF-1 C HMG2-related D TbgDal_X17490 hypothetical protein, conserved K09272 SSRP1; FACT complex subunit SSRP1/POB3 C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others D TbgDal_XI18480 hypothetical protein, conserved K22145 TMEM18; transmembrane protein 18 D TbgDal_IX4350 hypothetical protein, conserved K22758 CHCHD2; coiled-coil-helix-coiled-coil-helix domain-containing protein 2 # AProkaryotic type B Helix-turn-helix C AraC family C LysR family C DeoR family C LacI family C GntR family C TetR/AcrR family C Lrp/AsnC family C LuxR family C MarR family C MerR family C Fur family C IclR family C CRP/FNR family C Rrf2 family C ArsR family C XRE family C PadR family C Other families D TbgDal_XI11300 Biotin--acetyl-CoA-carboxylase ligase, putative K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0