+D GENES KO
#
KEGG Orthology (KO) - Tessaracoccus flavus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tfl00010]
D RPIT_12395 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RPIT_00620 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RPIT_05260 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RPIT_00675 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RPIT_05755 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D RPIT_09190 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPIT_11555 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RPIT_04220 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RPIT_04210 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RPIT_04215 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RPIT_11325 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RPIT_11330 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RPIT_10705 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RPIT_04080 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RPIT_14345 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RPIT_05250 pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RPIT_11440 acetoin dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RPIT_03580 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RPIT_03585 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_05955 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_11435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_11095 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RPIT_02720 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPIT_00030 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPIT_02715 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPIT_00035 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPIT_11905 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RPIT_14205 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RPIT_09695 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPIT_07070 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RPIT_06595 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPIT_00655 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D RPIT_10295 hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D RPIT_01330 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RPIT_03270 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RPIT_05945 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:tfl00020]
D RPIT_05095 citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RPIT_14165 citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RPIT_05610 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RPIT_02410 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RPIT_06770 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D RPIT_03585 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_05955 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_11435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_02720 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPIT_00030 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPIT_02715 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPIT_00035 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPIT_09865 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RPIT_09870 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RPIT_00755 propionyl-CoA--succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RPIT_08575 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RPIT_08570 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RPIT_08580 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RPIT_14090 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RPIT_12945 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RPIT_09820 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RPIT_11140 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RPIT_01330 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RPIT_05250 pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RPIT_11440 acetoin dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RPIT_03580 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RPIT_11095 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:tfl00030]
D RPIT_00620 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RPIT_04270 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RPIT_03130 NAD-dependent epimerase K19243 azf; NAD+ dependent glucose-6-phosphate dehydrogenase [EC:1.1.1.388]
D RPIT_04260 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D RPIT_14575 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D RPIT_08955 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RPIT_06130 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RPIT_13870 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPIT_13875 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPIT_10275 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPIT_12800 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RPIT_03225 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RPIT_08915 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RPIT_12170 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RPIT_12625 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RPIT_06595 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPIT_14185 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RPIT_10740 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RPIT_12510 hypothetical protein K00851 idnK; gluconokinase [EC:2.7.1.12]
D RPIT_09190 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPIT_11555 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RPIT_05260 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RPIT_00675 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RPIT_05755 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tfl00040]
D RPIT_03895 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPIT_00495 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPIT_11055 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RPIT_08980 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D RPIT_06130 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RPIT_08975 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D RPIT_13275 hypothetical protein K00854 xylB; xylulokinase [EC:2.7.1.17]
D RPIT_14740 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RPIT_14745 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RPIT_11485 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RPIT_11490 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
C 00051 Fructose and mannose metabolism [PATH:tfl00051]
D RPIT_04820 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RPIT_11215 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RPIT_11660 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RPIT_09710 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RPIT_09575 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RPIT_09610 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RPIT_11490 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D RPIT_11485 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RPIT_05260 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RPIT_00675 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RPIT_05755 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D RPIT_12860 hypothetical protein K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D RPIT_11420 short-chain dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D RPIT_08900 alcohol dehydrogenase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D RPIT_14360 hypothetical protein K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RPIT_14745 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RPIT_09190 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPIT_11555 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RPIT_04220 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RPIT_11630 hypothetical protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D RPIT_12005 glycosyl hydrolase family 32 K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D RPIT_08915 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RPIT_12730 hypothetical protein K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
C 00052 Galactose metabolism [PATH:tfl00052]
D RPIT_07070 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RPIT_02550 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RPIT_06775 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RPIT_14805 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPIT_13780 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPIT_11055 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RPIT_06595 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPIT_12395 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RPIT_01075 hypothetical protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RPIT_13265 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RPIT_05260 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RPIT_00675 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RPIT_02515 alpha-amylase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RPIT_07470 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RPIT_02070 alpha-amylase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RPIT_00200 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RPIT_04405 hypothetical protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D RPIT_02520 glucohydrolase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:tfl00053]
D RPIT_03895 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPIT_00495 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPIT_08980 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:tfl00500]
D RPIT_02515 alpha-amylase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RPIT_07470 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RPIT_02070 alpha-amylase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RPIT_00200 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RPIT_02530 alpha-amylase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D RPIT_11055 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RPIT_02945 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RPIT_12755 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RPIT_07825 glycoside hydrolase family 6 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RPIT_03270 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RPIT_13025 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RPIT_10165 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RPIT_00520 glycosyl transferase family 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RPIT_06560 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RPIT_11340 1,4-alpha-glucan branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RPIT_11875 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RPIT_06545 glycogen debranching enzyme GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D RPIT_12550 hypothetical protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D RPIT_09205 maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D RPIT_00400 alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D RPIT_04405 hypothetical protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D RPIT_02520 glucohydrolase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D RPIT_09535 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RPIT_06555 hypothetical protein K16146 pep2; maltokinase [EC:2.7.1.175]
D RPIT_06550 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D RPIT_10170 glycosyl transferase family 1 K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D RPIT_05945 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RPIT_14320 glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D RPIT_06580 malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D RPIT_06585 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D RPIT_05140 trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D RPIT_06595 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPIT_12395 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RPIT_00620 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RPIT_04820 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tfl00520]
D RPIT_11825 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RPIT_01745 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RPIT_05945 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RPIT_11120 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D RPIT_11170 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D RPIT_04820 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RPIT_10085 glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RPIT_03455 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RPIT_10745 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RPIT_04770 hypothetical protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D RPIT_05960 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RPIT_02815 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RPIT_12390 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D RPIT_00545 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RPIT_00550 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D RPIT_00580 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D RPIT_14040 Vi polysaccharide biosynthesis protein VipA/TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D RPIT_13405 alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RPIT_07335 hypothetical protein K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55]
D RPIT_12395 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RPIT_00655 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D RPIT_06595 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPIT_11055 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RPIT_03895 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPIT_00495 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPIT_02550 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RPIT_06775 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RPIT_14805 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPIT_13780 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPIT_00620 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RPIT_11215 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RPIT_11660 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RPIT_09710 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RPIT_09575 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RPIT_09610 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RPIT_13025 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RPIT_10165 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:tfl00620]
D RPIT_09695 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPIT_11095 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RPIT_02720 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPIT_00030 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPIT_02715 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPIT_00035 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPIT_05250 pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RPIT_11440 acetoin dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RPIT_03580 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RPIT_03585 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_05955 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_11435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_02965 formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RPIT_14205 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RPIT_14420 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RPIT_14425 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RPIT_04080 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RPIT_09685 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RPIT_08755 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RPIT_00755 propionyl-CoA--succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RPIT_11905 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RPIT_00680 hypothetical protein K18930 dld; D-lactate dehydrogenase
D RPIT_03105 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RPIT_01250 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RPIT_10250 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RPIT_11140 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RPIT_09820 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RPIT_14090 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RPIT_12945 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RPIT_01330 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RPIT_08485 hypothetical protein K20370 PEPCK; phosphoenolpyruvate carboxykinase (diphosphate) [EC:4.1.1.38]
D RPIT_14345 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RPIT_01925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPIT_07940 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RPIT_05035 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tfl00630]
D RPIT_09695 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPIT_09820 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RPIT_05095 citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RPIT_14165 citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RPIT_05610 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RPIT_01925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPIT_06605 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RPIT_09685 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RPIT_09655 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D RPIT_12590 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPIT_12595 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPIT_00805 catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D RPIT_03500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPIT_03540 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPIT_11275 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RPIT_04130 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RPIT_04140 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RPIT_03585 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_05955 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_11435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_04135 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D RPIT_12560 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RPIT_03625 hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RPIT_06770 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D RPIT_09805 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:tfl00640]
D RPIT_09695 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPIT_14420 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RPIT_14425 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RPIT_00350 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RPIT_00355 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RPIT_11430 dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RPIT_00360 diaminohydroxyphosphoribosylaminopyrimidine deaminase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RPIT_03585 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_05955 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_11435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_02965 formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RPIT_01915 hypothetical protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RPIT_09685 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RPIT_11370 oxaloacetate decarboxylase K03416 E2.1.3.1-5S; methylmalonyl-CoA carboxyltransferase 5S subunit [EC:2.1.3.1]
D RPIT_11360 hypothetical protein K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D RPIT_11365 methylmalonyl-CoA carboxyltransferase K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D RPIT_00060 hypothetical protein K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D RPIT_00055 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K17490 E2.1.3.1-1.3S; methylmalonyl-CoA carboxyltransferase 1.3S subunit [EC:2.1.3.1]
D RPIT_11355 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K17490 E2.1.3.1-1.3S; methylmalonyl-CoA carboxyltransferase 1.3S subunit [EC:2.1.3.1]
D RPIT_09655 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D RPIT_06605 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RPIT_12590 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPIT_12595 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPIT_09870 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RPIT_09865 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RPIT_03285 methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RPIT_11905 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:tfl00650]
D RPIT_01925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPIT_10250 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RPIT_10245 hypothetical protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RPIT_10240 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RPIT_08575 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RPIT_08570 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RPIT_08580 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RPIT_12765 NADP-dependent succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RPIT_00755 propionyl-CoA--succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RPIT_02965 formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RPIT_11095 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RPIT_02720 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPIT_00030 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RPIT_02715 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPIT_00035 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RPIT_07970 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPIT_07965 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:tfl00660]
D RPIT_07970 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPIT_07965 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RPIT_09870 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RPIT_09865 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RPIT_07905 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RPIT_07900 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RPIT_07945 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:tfl00562]
D RPIT_03310 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D RPIT_03315 2-keto-myo-inositol dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D RPIT_12525 inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D RPIT_03235 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D RPIT_03230 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D RPIT_12535 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D RPIT_03285 methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RPIT_04220 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tfl00190]
D RPIT_02630 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RPIT_02635 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RPIT_02740 hypothetical protein K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RPIT_02640 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RPIT_02745 hypothetical protein K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RPIT_02645 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RPIT_01605 hypothetical protein K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RPIT_02650 NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RPIT_02655 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RPIT_02660 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RPIT_02665 NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RPIT_02670 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RPIT_02750 NADH dehydrogenase K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RPIT_02675 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RPIT_02680 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RPIT_02685 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RPIT_02690 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RPIT_02695 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RPIT_12130 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RPIT_08575 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RPIT_08570 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RPIT_08580 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RPIT_03710 ubiquinol-cytochrome C reductase K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RPIT_03705 ubiquinol-cytochrome c reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D RPIT_03715 cystathionine beta-lyase K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D RPIT_04300 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RPIT_03645 cytochrome C oxidase subunit IV K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D RPIT_03720 cytochrome B K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D RPIT_03640 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RPIT_03635 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RPIT_04320 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RPIT_12920 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RPIT_12925 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RPIT_06675 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RPIT_06665 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RPIT_06670 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RPIT_06680 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RPIT_06660 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RPIT_06695 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RPIT_06685 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RPIT_06690 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RPIT_01540 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RPIT_01780 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RPIT_01820 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:tfl00680]
D RPIT_11275 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RPIT_10705 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RPIT_09820 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RPIT_09190 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPIT_11555 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RPIT_05260 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RPIT_00675 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RPIT_14420 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RPIT_14425 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RPIT_09695 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPIT_11325 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RPIT_11330 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RPIT_06830 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RPIT_11125 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RPIT_00765 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:tfl00910]
D RPIT_10905 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RPIT_02150 nitrate transporter permease K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RPIT_02155 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RPIT_02130 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D RPIT_02135 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D RPIT_02145 respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D RPIT_10900 nitrite reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D RPIT_10895 hypothetical protein K00360 nasB; assimilatory nitrate reductase electron transfer subunit [EC:1.7.99.-]
D RPIT_10890 nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D RPIT_02430 nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D RPIT_02425 cytochrome c nitrite reductase small subunit K15876 nrfH; cytochrome c nitrite reductase small subunit
D RPIT_11060 copper oxidase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D RPIT_04295 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D RPIT_02055 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RPIT_10685 hypothetical protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RPIT_04525 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RPIT_03500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPIT_03540 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPIT_06420 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RPIT_06415 gltD; glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RPIT_05490 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:tfl00920]
D RPIT_14265 hypothetical protein K00299 ssuE; FMN reductase [EC:1.5.1.38]
D RPIT_00015 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RPIT_00010 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RPIT_14880 sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D RPIT_14875 oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RPIT_01180 sulfide:quinone reductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RPIT_07010 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RPIT_10335 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RPIT_09930 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RPIT_06005 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RPIT_11240 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RPIT_10830 dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tfl00061]
D RPIT_09685 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RPIT_05200 acyl carrier protein K02078 acpP; acyl carrier protein
D RPIT_05210 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RPIT_05205 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RPIT_05195 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RPIT_07160 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPIT_01930 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPIT_14480 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPIT_08990 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPIT_01950 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tfl00071]
D RPIT_01925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPIT_01915 hypothetical protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RPIT_14480 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPIT_08990 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPIT_01950 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
D RPIT_06355 haloacid dehalogenase K13356 FAR; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tfl00561]
D RPIT_12560 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RPIT_03625 hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RPIT_14205 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RPIT_01870 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D RPIT_02560 dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D RPIT_01865 dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D RPIT_01860 hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D RPIT_13145 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RPIT_08110 hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D RPIT_03780 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RPIT_14400 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RPIT_07995 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RPIT_13050 hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RPIT_00420 hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RPIT_05515 hypothetical protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D RPIT_13265 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:tfl00564]
D RPIT_13515 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RPIT_01120 sn-glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RPIT_01115 anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D RPIT_01110 sn-glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D RPIT_03780 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RPIT_14400 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RPIT_07995 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RPIT_13050 hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RPIT_00420 hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RPIT_12285 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RPIT_05970 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RPIT_04515 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RPIT_01620 hypothetical protein K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RPIT_07110 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RPIT_09885 cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RPIT_05710 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
D RPIT_14395 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
C 00600 Sphingolipid metabolism [PATH:tfl00600]
D RPIT_01075 hypothetical protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RPIT_12385 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D RPIT_13265 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:tfl00592]
D RPIT_01915 hypothetical protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:tfl01040]
D RPIT_11760 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D RPIT_11765 stearoyl-CoA 9-desaturase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D RPIT_01915 hypothetical protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RPIT_14495 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RPIT_06965 hypothetical protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tfl00230]
D RPIT_06595 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPIT_14185 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RPIT_10740 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RPIT_02380 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RPIT_01905 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RPIT_09850 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RPIT_02015 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D RPIT_01990 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D RPIT_01995 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RPIT_02385 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RPIT_09640 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RPIT_09635 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RPIT_01945 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RPIT_09845 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RPIT_06300 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RPIT_00345 hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RPIT_01105 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D RPIT_09705 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RPIT_02785 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RPIT_01560 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RPIT_09950 inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RPIT_09955 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RPIT_08765 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RPIT_09160 hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D RPIT_09495 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RPIT_09925 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RPIT_11195 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RPIT_06945 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RPIT_03700 inosine 5-monophosphate dehydrogenase K26110 guaB1; GMP reductase [EC:1.7.1.7]
D RPIT_12635 tRNA-specific adenosine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D RPIT_06160 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RPIT_07020 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RPIT_05100 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D RPIT_06290 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RPIT_10690 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RPIT_01875 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RPIT_09755 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D RPIT_14520 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D RPIT_05695 HIT family hydrolase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D RPIT_00015 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RPIT_00010 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:tfl00240]
D RPIT_06180 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RPIT_06185 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RPIT_08945 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RPIT_08950 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RPIT_11090 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D RPIT_06175 dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RPIT_11595 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RPIT_06170 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RPIT_04505 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RPIT_08765 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RPIT_09665 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RPIT_08080 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RPIT_06095 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RPIT_09725 hypothetical protein K00876 udk; uridine kinase [EC:2.7.1.48]
D RPIT_00345 hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RPIT_01105 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D RPIT_12270 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RPIT_08940 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RPIT_09765 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RPIT_07020 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RPIT_13650 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RPIT_13890 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RPIT_01465 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RPIT_05550 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RPIT_01290 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D RPIT_05520 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RPIT_09490 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tfl00250]
D RPIT_12790 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RPIT_13030 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RPIT_02050 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D RPIT_00465 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RPIT_08195 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RPIT_01875 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RPIT_01945 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RPIT_08945 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RPIT_12765 NADP-dependent succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RPIT_06420 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RPIT_06415 gltD; glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RPIT_04525 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RPIT_04635 hypothetical protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RPIT_03500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPIT_03540 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPIT_06180 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RPIT_06185 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RPIT_08880 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RPIT_01995 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RPIT_10085 glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RPIT_02380 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tfl00260]
D RPIT_12215 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RPIT_01680 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RPIT_06745 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RPIT_06740 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D RPIT_12105 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RPIT_11275 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RPIT_12560 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RPIT_03625 hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RPIT_11325 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RPIT_11330 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RPIT_06830 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RPIT_11125 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RPIT_00765 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RPIT_00595 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RPIT_00600 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D RPIT_01500 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RPIT_04130 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RPIT_04140 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RPIT_03585 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_05955 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_11435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_04135 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D RPIT_14195 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RPIT_10505 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RPIT_13295 hypothetical protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RPIT_06430 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RPIT_06435 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RPIT_08490 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:tfl00270]
D RPIT_10335 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RPIT_09930 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RPIT_12190 hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RPIT_06120 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RPIT_06150 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RPIT_06935 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RPIT_09115 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RPIT_09555 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RPIT_12215 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RPIT_01680 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RPIT_06745 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RPIT_06005 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RPIT_11240 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RPIT_06020 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RPIT_05675 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPIT_14255 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPIT_12030 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RPIT_07010 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RPIT_11905 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RPIT_09820 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RPIT_14195 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RPIT_06830 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RPIT_11125 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:tfl00280]
D RPIT_05675 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPIT_14255 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPIT_00350 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RPIT_00355 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RPIT_11430 dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RPIT_00360 diaminohydroxyphosphoribosylaminopyrimidine deaminase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RPIT_03585 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_05955 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_11435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_09685 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RPIT_09655 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D RPIT_06605 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RPIT_12590 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPIT_12595 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPIT_03285 methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RPIT_01925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tfl00290]
D RPIT_10505 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RPIT_07905 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RPIT_07900 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RPIT_07945 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RPIT_07970 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPIT_07965 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RPIT_07960 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RPIT_07000 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RPIT_05675 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPIT_14255 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPIT_07940 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RPIT_05035 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:tfl00300]
D RPIT_06745 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RPIT_12215 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RPIT_01680 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RPIT_12400 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RPIT_10155 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RPIT_04645 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RPIT_10215 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RPIT_08205 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RPIT_10190 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RPIT_07050 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RPIT_03125 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RPIT_06750 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RPIT_13545 GntR family transcriptional regulator K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RPIT_04005 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RPIT_04010 UDP-N-acetylmuramyl peptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:tfl00310]
D RPIT_03585 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_05955 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_11435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_01925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPIT_12765 NADP-dependent succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:tfl00220]
D RPIT_00340 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RPIT_00465 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RPIT_08195 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RPIT_08880 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RPIT_01995 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RPIT_03500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPIT_03540 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPIT_06180 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RPIT_06185 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RPIT_04525 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RPIT_08215 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RPIT_08210 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RPIT_08220 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RPIT_08205 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:tfl00330]
D RPIT_01500 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RPIT_07180 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RPIT_01685 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RPIT_01670 hypothetical protein K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D RPIT_04635 hypothetical protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RPIT_04680 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RPIT_04690 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:tfl00340]
D RPIT_08300 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RPIT_08305 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RPIT_06460 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D RPIT_06360 bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D RPIT_06365 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RPIT_07985 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RPIT_06370 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RPIT_06375 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RPIT_06825 histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D RPIT_06380 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RPIT_01500 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:tfl00350]
D RPIT_06375 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RPIT_06935 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RPIT_01500 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RPIT_12765 NADP-dependent succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RPIT_04160 hypothetical protein K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4]
C 00360 Phenylalanine metabolism [PATH:tfl00360]
D RPIT_01500 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RPIT_10390 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D RPIT_06375 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RPIT_06935 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RPIT_04350 hypothetical protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:tfl00380]
D RPIT_03585 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_05955 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_11435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_01925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPIT_01500 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RPIT_00805 catalase HPII K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tfl00400]
D RPIT_03795 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RPIT_09560 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RPIT_06210 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RPIT_06815 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RPIT_06215 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RPIT_06455 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RPIT_03735 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RPIT_06360 bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D RPIT_06440 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RPIT_13295 hypothetical protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RPIT_06430 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RPIT_06435 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RPIT_08490 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RPIT_09945 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D RPIT_06100 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RPIT_00415 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D RPIT_06375 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RPIT_06935 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tfl00410]
D RPIT_01915 hypothetical protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RPIT_03285 methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:tfl00430]
D RPIT_13030 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RPIT_14425 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RPIT_14420 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:tfl00450]
D RPIT_11240 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RPIT_12190 hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RPIT_06120 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RPIT_04360 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RPIT_13530 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RPIT_00015 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RPIT_00010 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RPIT_09730 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tfl00460]
D RPIT_02945 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RPIT_12755 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RPIT_11275 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tfl00470]
D RPIT_00370 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RPIT_13550 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RPIT_07130 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RPIT_08880 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RPIT_01995 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RPIT_09505 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RPIT_04020 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RPIT_07050 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RPIT_03125 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RPIT_06750 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:tfl00480]
D RPIT_09995 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D RPIT_06940 hypothetical protein K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D RPIT_12030 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RPIT_03595 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RPIT_08930 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RPIT_02005 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RPIT_02410 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RPIT_08955 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RPIT_04270 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:tfl00515]
D RPIT_10965 dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:tfl00514]
D RPIT_10965 dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:tfl00511]
D RPIT_12385 hypothetical protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D RPIT_01075 hypothetical protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:tfl00542]
D RPIT_06710 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tfl00541]
D RPIT_11055 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RPIT_14805 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPIT_13780 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RPIT_03895 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPIT_00495 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RPIT_12640 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RPIT_02555 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RPIT_12645 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RPIT_12650 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D RPIT_13980 hypothetical protein K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D RPIT_11215 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RPIT_11660 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RPIT_09710 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RPIT_09575 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RPIT_09610 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RPIT_10745 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RPIT_00545 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RPIT_00550 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D RPIT_14040 Vi polysaccharide biosynthesis protein VipA/TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D RPIT_00580 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:tfl00550]
D RPIT_05960 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RPIT_02815 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RPIT_04035 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RPIT_04020 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RPIT_04005 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RPIT_13550 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RPIT_07130 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RPIT_04010 UDP-N-acetylmuramyl peptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RPIT_08330 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RPIT_04015 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RPIT_04030 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RPIT_04000 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RPIT_12705 cell division protein FtsI K05364 pbpA; penicillin-binding protein A
D RPIT_01545 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:tfl00552]
D RPIT_08330 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RPIT_06710 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RPIT_12310 hypothetical protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RPIT_12365 hypothetical protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RPIT_09625 hypothetical protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RPIT_05515 hypothetical protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:tfl00543]
D RPIT_14015 hypothetical protein K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ
D RPIT_06710 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RPIT_10335 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RPIT_09620 glycosyl transferase family 2 K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tfl00730]
D RPIT_11845 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RPIT_06540 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RPIT_05620 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RPIT_11835 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RPIT_03815 hypothetical protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RPIT_11840 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RPIT_07125 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RPIT_06820 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RPIT_11850 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:tfl00740]
D RPIT_04470 hypothetical protein K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D RPIT_04615 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RPIT_14265 hypothetical protein K00299 ssuE; FMN reductase [EC:1.5.1.38]
D RPIT_11835 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:tfl00750]
D RPIT_11790 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RPIT_10385 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RPIT_05965 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D RPIT_11125 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RPIT_12105 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RPIT_01225 pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D RPIT_01230 glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tfl00760]
D RPIT_12790 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RPIT_12785 quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RPIT_12795 nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RPIT_09520 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RPIT_09705 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RPIT_02785 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RPIT_00345 hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RPIT_01105 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D RPIT_04695 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RPIT_05440 hypothetical protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RPIT_11715 NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RPIT_07105 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RPIT_10315 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D RPIT_13720 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RPIT_08095 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RPIT_11895 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RPIT_11890 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RPIT_12765 NADP-dependent succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:tfl00770]
D RPIT_07970 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RPIT_07965 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RPIT_07960 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RPIT_07000 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RPIT_10090 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D RPIT_08700 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RPIT_04125 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RPIT_10080 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RPIT_05675 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPIT_14255 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:tfl00780]
D RPIT_05195 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RPIT_07160 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPIT_01930 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPIT_09975 biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
C 00785 Lipoic acid metabolism [PATH:tfl00785]
D RPIT_03570 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RPIT_11470 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RPIT_03585 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_05955 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_11435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_05250 pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RPIT_11440 acetoin dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RPIT_03580 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RPIT_06770 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D RPIT_00350 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RPIT_00355 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RPIT_11430 dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RPIT_00360 diaminohydroxyphosphoribosylaminopyrimidine deaminase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RPIT_04130 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RPIT_04140 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RPIT_04135 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tfl00790]
D RPIT_01570 GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RPIT_01580 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RPIT_01585 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RPIT_01575 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RPIT_01595 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RPIT_14665 sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D RPIT_09480 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RPIT_08775 dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RPIT_12715 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D RPIT_01980 hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D RPIT_09110 hypothetical protein K17488 mptA; GTP cyclohydrolase IV [EC:3.5.4.39]
D RPIT_02115 cyclic pyranopterin phosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RPIT_02340 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RPIT_02160 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RPIT_11025 hypothetical protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RPIT_02170 hypothetical protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:tfl00670]
D RPIT_09480 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RPIT_06035 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RPIT_09840 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RPIT_11275 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RPIT_09850 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RPIT_09845 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RPIT_06140 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RPIT_04140 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RPIT_06120 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RPIT_09490 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RPIT_09805 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RPIT_03830 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RPIT_11030 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tfl00860]
D RPIT_08020 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPIT_03000 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPIT_04715 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RPIT_04740 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RPIT_04735 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RPIT_04730 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RPIT_04745 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RPIT_04720 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RPIT_13320 hypothetical protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D RPIT_04725 hypothetical protein K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D RPIT_01700 hypothetical protein K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D RPIT_00040 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RPIT_14180 radical SAM/SPASM domain-containing protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D RPIT_04300 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RPIT_04320 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RPIT_05220 precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D RPIT_06650 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RPIT_08425 copper oxidase K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
D RPIT_13495 copper oxidase K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tfl00130]
D RPIT_02595 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RPIT_02620 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D RPIT_02585 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D RPIT_02580 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D RPIT_12280 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D RPIT_02575 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RPIT_10805 hypothetical protein K09834 VTE1; tocopherol cyclase [EC:5.5.1.24]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tfl00900]
D RPIT_05620 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RPIT_04535 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RPIT_11295 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RPIT_10945 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RPIT_11290 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RPIT_04545 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RPIT_10510 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RPIT_01925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPIT_03825 hypothetical protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RPIT_13200 isopentenyl-diphosphate delta-isomerase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RPIT_10535 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:tfl00906]
D RPIT_13190 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RPIT_13195 phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D RPIT_00795 hypothetical protein K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
D RPIT_13185 isorenieratene synthase K09879 crtU; carotenoid phi-ring synthase / carotenoid chi-ring synthase [EC:1.3.99.39 1.3.99.40]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RPIT_13870 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPIT_13875 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RPIT_10275 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:tfl00523]
D RPIT_12640 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RPIT_02555 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RPIT_12645 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RPIT_12650 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D RPIT_13980 hypothetical protein K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D RPIT_02620 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:tfl01055]
D RPIT_12645 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RPIT_10355 hypothetical protein K16444 gtfB; vancomycin aglycone glucosyltransferase [EC:2.4.1.310]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:tfl00946]
D RPIT_02945 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RPIT_12755 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RPIT_11380 hypothetical protein K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis [PATH:tfl00332]
D RPIT_04680 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RPIT_04690 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:tfl00261]
D RPIT_00015 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RPIT_00010 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RPIT_12215 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RPIT_01680 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RPIT_12400 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RPIT_10155 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RPIT_04645 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tfl00521]
D RPIT_12395 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RPIT_06595 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RPIT_03310 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D RPIT_12640 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RPIT_02555 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RPIT_12645 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RPIT_12650 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D RPIT_13980 hypothetical protein K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RPIT_12395 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:tfl00525]
D RPIT_12640 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RPIT_02555 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RPIT_12645 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RPIT_10095 hypothetical protein K19978 acbK; acarbose 7IV-phosphotransferase [EC:2.7.1.187]
C 00401 Novobiocin biosynthesis [PATH:tfl00401]
D RPIT_06100 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RPIT_06375 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RPIT_06935 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RPIT_06455 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RPIT_05210 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RPIT_07160 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPIT_01930 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:tfl00998]
D RPIT_05200 acyl carrier protein K02078 acpP; acyl carrier protein
D RPIT_03115 2,3-diaminopropionate biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tfl00999]
D RPIT_06150 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RPIT_02945 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RPIT_12755 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D RPIT_03115 2,3-diaminopropionate biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:tfl00362]
D RPIT_12905 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D RPIT_10250 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RPIT_10245 hypothetical protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RPIT_10240 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RPIT_01925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D RPIT_08755 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
D RPIT_12905 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:tfl00622]
D RPIT_12905 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D RPIT_12905 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tfl03020]
D RPIT_02915 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RPIT_02920 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RPIT_03370 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RPIT_06155 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tfl03010]
D RPIT_04120 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RPIT_04495 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RPIT_03070 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RPIT_03175 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RPIT_14500 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RPIT_02955 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RPIT_03160 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RPIT_03450 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RPIT_03035 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RPIT_03360 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RPIT_02950 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RPIT_03355 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RPIT_03155 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RPIT_04630 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RPIT_08600 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RPIT_03085 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RPIT_14510 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RPIT_03060 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RPIT_04860 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RPIT_02865 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RPIT_03055 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RPIT_03040 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RPIT_03045 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RPIT_03150 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RPIT_03165 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RPIT_02910 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RPIT_14515 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RPIT_02905 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RPIT_02860 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RPIT_03445 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RPIT_03140 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RPIT_03185 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RPIT_03075 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RPIT_03375 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RPIT_03170 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RPIT_08565 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RPIT_08270 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RPIT_04665 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RPIT_03065 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RPIT_03050 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RPIT_03145 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RPIT_10730 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D RPIT_04670 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RPIT_08725 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RPIT_03080 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RPIT_03180 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RPIT_06730 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RPIT_08690 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RPIT_02800 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RPIT_13600 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RPIT_08275 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RPIT_03350 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RPIT_08175 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RPIT_08135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RPIT_08130 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RPIT_08170 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RPIT_08125 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RPIT_08165 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tfl00970]
D RPIT_13505 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPIT_11015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPIT_04750 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPIT_09055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPIT_06760 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPIT_12295 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPIT_11080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPIT_05130 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RPIT_02465 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RPIT_05655 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RPIT_07920 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RPIT_07915 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RPIT_02470 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RPIT_00685 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RPIT_08830 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RPIT_05650 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RPIT_09065 tRNA-His K14226 tRNA-His; tRNA His
D RPIT_13680 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RPIT_04085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPIT_12460 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPIT_10645 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPIT_09465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPIT_08345 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPIT_02495 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RPIT_09315 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RPIT_05150 tRNA-Met K14230 tRNA-Met; tRNA Met
D RPIT_02795 tRNA-Met K14230 tRNA-Met; tRNA Met
D RPIT_06875 tRNA-Met K14230 tRNA-Met; tRNA Met
D RPIT_02460 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RPIT_08885 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RPIT_06080 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RPIT_01350 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RPIT_12240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPIT_12325 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPIT_12305 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPIT_01165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPIT_02790 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RPIT_11220 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RPIT_01495 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RPIT_02845 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RPIT_02780 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RPIT_05645 tRNA-Val K14237 tRNA-Val; tRNA Val
D RPIT_05275 tRNA-Val K14237 tRNA-Val; tRNA Val
D RPIT_05660 tRNA-Val K14237 tRNA-Val; tRNA Val
D RPIT_08020 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPIT_03000 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPIT_06510 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RPIT_06505 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RPIT_06515 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RPIT_02990 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RPIT_06235 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RPIT_06260 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RPIT_02540 glycine--tRNA ligase subunit alpha/beta K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RPIT_05690 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RPIT_00430 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RPIT_11265 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RPIT_09730 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RPIT_06140 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RPIT_08785 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RPIT_04825 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RPIT_12195 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RPIT_12735 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RPIT_00650 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RPIT_04555 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RPIT_06275 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RPIT_08260 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RPIT_08255 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RPIT_08185 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RPIT_05405 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tfl03060]
D RPIT_03190 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RPIT_04250 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RPIT_06310 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RPIT_06305 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RPIT_06315 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RPIT_13585 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RPIT_05355 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RPIT_01195 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D RPIT_08665 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RPIT_12980 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RPIT_08005 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D RPIT_10140 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D RPIT_08000 twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D RPIT_08560 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RPIT_04070 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tfl04122]
D RPIT_06540 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RPIT_07010 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RPIT_06530 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RPIT_02160 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RPIT_02115 cyclic pyranopterin phosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RPIT_02120 hypothetical protein K03636 moaD; sulfur-carrier protein
D RPIT_02165 hypothetical protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D RPIT_02340 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 03050 Proteasome
C 03018 RNA degradation [PATH:tfl03018]
D RPIT_08730 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D RPIT_10705 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RPIT_04640 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RPIT_06735 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RPIT_07075 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RPIT_04660 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RPIT_05260 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RPIT_11930 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RPIT_09965 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPIT_11200 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPIT_01780 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RPIT_01820 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RPIT_13110 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tfl03030]
D RPIT_03765 endonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPIT_03020 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPIT_06390 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RPIT_01200 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RPIT_01475 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RPIT_04855 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RPIT_13635 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RPIT_12965 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RPIT_05105 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RPIT_14505 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RPIT_14635 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D RPIT_09735 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RPIT_08555 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RPIT_04100 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RPIT_08925 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tfl03410]
D RPIT_01380 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RPIT_10585 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RPIT_13000 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RPIT_01985 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RPIT_08680 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RPIT_00385 endonuclease VIII K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RPIT_08910 DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RPIT_08965 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D RPIT_10925 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RPIT_07775 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RPIT_10380 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RPIT_00850 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RPIT_02760 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RPIT_14475 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RPIT_04100 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RPIT_08925 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tfl03420]
D RPIT_10720 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RPIT_04165 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RPIT_04155 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RPIT_04175 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RPIT_09880 DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPIT_05435 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPIT_06915 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPIT_04100 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RPIT_08925 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tfl03430]
D RPIT_09880 DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPIT_05435 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPIT_06915 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPIT_10520 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RPIT_10525 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RPIT_14505 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RPIT_14635 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D RPIT_06390 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RPIT_13635 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RPIT_01200 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RPIT_04855 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RPIT_01475 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RPIT_03765 endonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPIT_03020 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPIT_08925 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:tfl03440]
D RPIT_14505 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RPIT_14635 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D RPIT_13645 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RPIT_05055 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RPIT_01210 recombination protein RecR K06187 recR; recombination protein RecR
D RPIT_07085 recombinase RecA K03553 recA; recombination protein RecA
D RPIT_04100 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RPIT_06325 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RPIT_06320 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RPIT_06330 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RPIT_08390 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RPIT_08710 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RPIT_06925 hypothetical protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D RPIT_06920 hypothetical protein K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D RPIT_06930 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RPIT_06390 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RPIT_13635 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RPIT_01200 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RPIT_04855 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RPIT_01475 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RPIT_03765 endonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPIT_03020 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPIT_06145 hypothetical protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:tfl03450]
D RPIT_05385 Ku protein K10979 ku; DNA end-binding protein Ku
D RPIT_00740 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RPIT_05425 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RPIT_13140 DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RPIT_00175 DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:tfl03250]
D RPIT_03760 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tfl02010]
D RPIT_06395 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RPIT_06400 iron transporter permease K02011 afuB; iron(III) transport system permease protein
D RPIT_06405 polyamine ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RPIT_01635 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D RPIT_01630 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D RPIT_01625 hypothetical protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D RPIT_11755 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RPIT_11750 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RPIT_11745 glycine/betaine ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D RPIT_11740 glycine betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RPIT_11735 glycine/betaine ABC transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D RPIT_11725 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RPIT_11730 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RPIT_11720 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RPIT_02085 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RPIT_02090 maltose ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RPIT_02095 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RPIT_03260 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RPIT_08865 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RPIT_11390 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RPIT_03255 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RPIT_08860 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RPIT_11395 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RPIT_03250 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RPIT_08855 ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RPIT_11400 thiamine ABC transporter ATP-binding protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RPIT_01900 sugar ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D RPIT_01895 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D RPIT_01890 sugar ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D RPIT_11635 sugar ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RPIT_11645 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D RPIT_11640 sugar ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D RPIT_12220 carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D RPIT_12740 ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D RPIT_12745 ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D RPIT_12750 sugar ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D RPIT_12840 hypothetical protein K23545 yphF; sugar transport system substrate-binding protein
D RPIT_12830 hypothetical protein K23546 yphD; sugar transport system permease protein
D RPIT_12835 hypothetical protein K23547 yphE; sugar transport system ATP-binding protein
D RPIT_02935 sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RPIT_11975 sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RPIT_02925 ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D RPIT_11980 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D RPIT_02930 ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RPIT_11985 ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RPIT_09785 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RPIT_09775 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RPIT_09770 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RPIT_09780 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RPIT_13270 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein
D RPIT_11495 BMP family ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RPIT_13280 dolichyl-phosphate beta-glucosyltransferase K10440 rbsC; ribose transport system permease protein
D RPIT_11500 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RPIT_11505 D-xylose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RPIT_13285 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RPIT_01295 LacI family transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RPIT_01305 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RPIT_01300 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RPIT_11995 sugar ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D RPIT_03300 hypothetical protein K17213 K17213; inositol transport system substrate-binding protein
D RPIT_03290 sugar ABC transporter permease K17214 K17214; inositol transport system permease protein
D RPIT_03295 D-xylose ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D RPIT_01770 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RPIT_01765 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RPIT_01760 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D RPIT_01755 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RPIT_04235 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D RPIT_04230 polar amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D RPIT_04245 glutamate ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D RPIT_00715 ABC transporter K02073 metQ; D-methionine transport system substrate-binding protein
D RPIT_00720 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RPIT_00725 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D RPIT_14735 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RPIT_14730 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RPIT_14725 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RPIT_14720 methionine ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RPIT_14715 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RPIT_10030 ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D RPIT_10025 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D RPIT_10020 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D RPIT_05075 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein
D RPIT_05065 metal ABC transporter K09816 znuB; zinc transport system permease protein
D RPIT_05070 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RPIT_04180 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D RPIT_04190 hypothetical protein K16783 bioN; biotin transport system permease protein
D RPIT_04185 cobalt ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D RPIT_08510 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D RPIT_00525 hypothetical protein K09692 tagG; teichoic acid transport system permease protein
D RPIT_01240 hypothetical protein K09694 nodJ; lipooligosaccharide transport system permease protein
D RPIT_01235 ABC transporter K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D RPIT_08460 hypothetical protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RPIT_05300 cell division protein K09811 ftsX; cell division transport system permease protein
D RPIT_05295 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RPIT_12890 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RPIT_12895 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RPIT_12930 thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:tfl02060]
D RPIT_07950 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RPIT_02065 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RPIT_01270 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RPIT_02060 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RPIT_05945 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RPIT_05570 PTS sugar transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RPIT_05575 phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D RPIT_14360 hypothetical protein K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:tfl03070]
D RPIT_06310 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RPIT_06305 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RPIT_04250 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RPIT_03190 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RPIT_06315 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RPIT_13585 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RPIT_05355 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RPIT_08665 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RPIT_08005 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D RPIT_10140 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D RPIT_08000 twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tfl02020]
D RPIT_11315 hypothetical protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D RPIT_11310 DNA-binding response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RPIT_01770 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RPIT_04320 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RPIT_00325 hypothetical protein K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RPIT_00330 DNA-binding response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D RPIT_05335 two-component sensor histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RPIT_05330 DNA-binding response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D RPIT_13605 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D RPIT_01250 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RPIT_07015 helix-turn-helix transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RPIT_02130 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D RPIT_02135 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D RPIT_02145 respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D RPIT_02140 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D RPIT_01405 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RPIT_14230 secretion protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RPIT_01410 hypothetical protein K12510 tadB; tight adherence protein B
D RPIT_01510 transcriptional regulator K04751 glnB; nitrogen regulatory protein P-II 1
D RPIT_03500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPIT_03540 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPIT_01925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPIT_08880 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D RPIT_12920 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RPIT_12925 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RPIT_00335 low molecular weight phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RPIT_00545 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RPIT_00550 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D RPIT_07825 glycoside hydrolase family 6 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tfl02024]
D RPIT_06455 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RPIT_13755 hypothetical protein K08642 lasA; LasA protease [EC:3.4.24.-]
D RPIT_03795 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RPIT_02190 hypothetical protein K07344 trbL; type IV secretion system protein TrbL
D RPIT_12815 hypothetical protein K20276 bapA; large repetitive protein
D RPIT_10000 hypothetical protein K20276 bapA; large repetitive protein
D RPIT_14480 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPIT_08990 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPIT_01950 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPIT_14735 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RPIT_14730 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RPIT_14725 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RPIT_14720 methionine ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RPIT_14715 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RPIT_12420 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RPIT_06855 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RPIT_12415 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RPIT_06850 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RPIT_06845 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RPIT_12410 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RPIT_06840 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RPIT_12405 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RPIT_13585 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RPIT_04250 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RPIT_03190 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RPIT_06315 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RPIT_05355 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RPIT_08665 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D RPIT_13270 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein
D RPIT_11495 BMP family ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly
D RPIT_06955 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RPIT_10705 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:tfl04980]
D RPIT_06650 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RPIT_12675 ATPase/protein kinase K07588 MMAA; GTPase [EC:3.6.5.-]
D RPIT_12590 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPIT_12595 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RPIT_06120 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tfl01501]
D RPIT_11825 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RPIT_01745 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RPIT_14735 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RPIT_14730 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RPIT_14725 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RPIT_14720 methionine ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RPIT_14715 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RPIT_04000 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tfl01502]
D RPIT_13550 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RPIT_07130 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RPIT_00370 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RPIT_04010 UDP-N-acetylmuramyl peptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RPIT_04015 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RPIT_04030 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D RPIT_03760 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tfl01000]
C 01001 Protein kinases [BR:tfl01001]
D RPIT_12710 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RPIT_03810 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RPIT_00845 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RPIT_07840 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RPIT_07870 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RPIT_13945 hypothetical protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D RPIT_11315 hypothetical protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D RPIT_00325 hypothetical protein K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RPIT_05335 two-component sensor histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RPIT_12145 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tfl01009]
D RPIT_09555 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RPIT_05260 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RPIT_12695 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RPIT_05420 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RPIT_00765 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:tfl01002]
D RPIT_04070 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RPIT_03740 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RPIT_06500 hypothetical protein K22684 MCA1; metacaspase-1 [EC:3.4.22.-]
D RPIT_02870 hypothetical protein K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D RPIT_09925 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RPIT_11195 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RPIT_06945 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RPIT_03770 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RPIT_02100 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RPIT_02380 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RPIT_06420 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RPIT_10085 glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RPIT_00440 peptidase C56 K05520 yhbO; deglycase [EC:3.5.1.124]
D RPIT_11600 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D RPIT_07930 hypothetical protein K07052 K07052; CAAX protease family protein
D RPIT_07200 hypothetical protein K07052 K07052; CAAX protease family protein
D RPIT_11450 CAAX protease family protein K07052 K07052; CAAX protease family protein
D RPIT_10675 hypothetical protein K07052 K07052; CAAX protease family protein
D RPIT_01675 CAAX protease family protein K07052 K07052; CAAX protease family protein
D RPIT_08930 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RPIT_02005 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RPIT_04315 hypothetical protein K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D RPIT_02705 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D RPIT_06885 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RPIT_06890 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RPIT_03595 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RPIT_10190 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RPIT_13755 hypothetical protein K08642 lasA; LasA protease [EC:3.4.24.-]
D RPIT_03490 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RPIT_03200 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RPIT_10100 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RPIT_01565 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RPIT_09035 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D RPIT_02010 hypothetical protein K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D RPIT_06535 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D RPIT_01545 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RPIT_08805 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RPIT_08810 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RPIT_07035 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RPIT_08560 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RPIT_08790 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-]
D RPIT_10270 hypothetical protein K04773 sppA; protease IV [EC:3.4.21.-]
C 01003 Glycosyltransferases [BR:tfl01003]
D RPIT_05985 dolichol-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D RPIT_10965 dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D RPIT_05705 hypothetical protein K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D RPIT_03400 glycosyl transferase K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D RPIT_05515 hypothetical protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D RPIT_10060 alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D RPIT_00520 glycosyl transferase family 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RPIT_10170 glycosyl transferase family 1 K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D RPIT_06710 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RPIT_13080 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D RPIT_02755 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D RPIT_12120 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D RPIT_09620 glycosyl transferase family 2 K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D RPIT_12010 hypothetical protein K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tfl01005]
D RPIT_06710 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tfl01011]
D RPIT_05960 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RPIT_02815 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RPIT_04035 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RPIT_04020 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RPIT_04005 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RPIT_13550 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RPIT_07130 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RPIT_00370 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RPIT_09505 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RPIT_04015 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RPIT_04030 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RPIT_08330 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RPIT_13120 murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RPIT_11605 murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RPIT_04000 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RPIT_12705 cell division protein FtsI K05364 pbpA; penicillin-binding protein A
D RPIT_01545 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RPIT_03770 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RPIT_02100 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RPIT_11600 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D RPIT_06225 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RPIT_13020 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:tfl01004]
D RPIT_05210 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RPIT_05205 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RPIT_05195 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RPIT_07160 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPIT_01930 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RPIT_14495 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RPIT_06965 hypothetical protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D RPIT_04435 enoyl-[acyl-carrier-protein] reductase K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118]
D RPIT_11760 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D RPIT_09695 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RPIT_14480 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPIT_08990 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPIT_01950 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPIT_03780 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RPIT_14400 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:tfl01008]
D RPIT_10355 hypothetical protein K16444 gtfB; vancomycin aglycone glucosyltransferase [EC:2.4.1.310]
C 01006 Prenyltransferases [BR:tfl01006]
D RPIT_03825 hypothetical protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RPIT_13200 isopentenyl-diphosphate delta-isomerase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RPIT_10535 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D RPIT_13190 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RPIT_07055 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RPIT_02575 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RPIT_04300 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:tfl01007]
D RPIT_08020 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPIT_03000 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPIT_02990 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RPIT_08185 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RPIT_05405 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RPIT_11265 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RPIT_00650 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RPIT_09730 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RPIT_12195 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RPIT_08785 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RPIT_04825 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RPIT_12735 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RPIT_06260 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RPIT_06275 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RPIT_00430 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RPIT_04555 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RPIT_05690 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RPIT_06235 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RPIT_08260 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RPIT_08255 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RPIT_06935 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RPIT_06375 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RPIT_00595 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RPIT_12190 hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RPIT_07180 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RPIT_08205 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RPIT_04740 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RPIT_05675 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPIT_14255 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RPIT_11125 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:tfl00199]
C 00194 Photosynthesis proteins [BR:tfl00194]
D RPIT_06660 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RPIT_06665 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RPIT_06670 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RPIT_06675 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RPIT_06680 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RPIT_06685 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RPIT_06690 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RPIT_06695 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RPIT_06700 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tfl03000]
D RPIT_09115 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RPIT_07095 alkaline phosphatase K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D RPIT_03265 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D RPIT_12850 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RPIT_13260 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RPIT_11405 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RPIT_11650 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RPIT_11690 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RPIT_12000 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RPIT_13290 hypothetical protein K03710 K03710; GntR family transcriptional regulator
D RPIT_05485 hypothetical protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RPIT_01220 hypothetical protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RPIT_08245 hypothetical protein K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D RPIT_12570 hypothetical protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D RPIT_14785 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RPIT_11915 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D RPIT_13205 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RPIT_05060 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RPIT_14135 hypothetical protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RPIT_12970 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RPIT_14750 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RPIT_13365 transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D RPIT_07675 transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D RPIT_07100 transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D RPIT_01010 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D RPIT_11115 dihydrofolate reductase K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D RPIT_13250 transcriptional regulator K07727 K07727; putative transcriptional regulator
D RPIT_07730 transcriptional regulator K07727 K07727; putative transcriptional regulator
D RPIT_05895 transcriptional regulator K07727 K07727; putative transcriptional regulator
D RPIT_00560 transcriptional regulator K07729 K07729; putative transcriptional regulator
D RPIT_00295 transcriptional regulator K07729 K07729; putative transcriptional regulator
D RPIT_04635 hypothetical protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RPIT_09600 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RPIT_01365 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RPIT_06785 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RPIT_07310 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RPIT_12960 transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RPIT_13565 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RPIT_06265 hypothetical protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D RPIT_11300 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D RPIT_08200 hypothetical protein K03402 argR; transcriptional regulator of arginine metabolism
D RPIT_04965 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RPIT_11850 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D RPIT_09920 hypothetical protein K03973 pspC; phage shock protein C
D RPIT_13520 transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D RPIT_08940 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RPIT_01470 hypothetical protein K07734 paiB; transcriptional regulator
D RPIT_05325 hypothetical protein K07735 algH; putative transcriptional regulator
D RPIT_04065 DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
D RPIT_05815 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D RPIT_07025 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D RPIT_03985 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:tfl03021]
D RPIT_03370 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RPIT_02915 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RPIT_02920 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RPIT_06155 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RPIT_06955 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D RPIT_06800 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RPIT_04575 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RPIT_06190 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RPIT_02855 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D RPIT_04065 DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
D RPIT_05815 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D RPIT_10570 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RPIT_06735 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:tfl03019]
D RPIT_08730 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D RPIT_08685 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RPIT_04660 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RPIT_07075 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RPIT_09060 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RPIT_10705 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RPIT_04640 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RPIT_06735 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RPIT_05260 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RPIT_11930 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RPIT_09965 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPIT_11200 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPIT_01780 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RPIT_01820 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RPIT_13110 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RPIT_04195 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ
D RPIT_07990 RNA helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D RPIT_06970 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D RPIT_04870 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:tfl03011]
D RPIT_04120 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RPIT_04495 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RPIT_03070 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RPIT_03175 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RPIT_14500 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RPIT_02955 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RPIT_03160 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RPIT_03450 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RPIT_03035 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RPIT_03360 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RPIT_02950 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RPIT_03355 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RPIT_03155 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RPIT_04630 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RPIT_08600 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RPIT_03085 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RPIT_14510 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RPIT_03060 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RPIT_04860 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RPIT_02865 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RPIT_03055 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RPIT_03040 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RPIT_03045 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RPIT_03150 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RPIT_03165 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RPIT_14515 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RPIT_02905 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RPIT_02860 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RPIT_02910 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RPIT_03445 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RPIT_03140 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RPIT_03185 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RPIT_03075 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RPIT_03375 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RPIT_03170 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RPIT_08565 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RPIT_08270 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RPIT_04665 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RPIT_03065 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RPIT_03050 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RPIT_03145 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RPIT_04670 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RPIT_08725 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RPIT_03080 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RPIT_03180 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RPIT_06730 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RPIT_08690 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RPIT_02800 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RPIT_13600 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RPIT_08275 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RPIT_03350 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RPIT_10730 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D RPIT_08125 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RPIT_08165 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RPIT_08175 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RPIT_08135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RPIT_08130 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RPIT_08170 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tfl03009]
D RPIT_08685 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RPIT_09060 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RPIT_05015 GTPase Era K03595 era; GTPase
D RPIT_04675 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D RPIT_04065 DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
D RPIT_05815 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D RPIT_04575 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RPIT_06190 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RPIT_02855 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D RPIT_10950 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RPIT_06135 rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RPIT_00780 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D RPIT_03420 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D RPIT_08705 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RPIT_04975 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RPIT_13575 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RPIT_03990 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RPIT_10960 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RPIT_08100 TlyA family rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RPIT_04415 hypothetical protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D RPIT_11270 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RPIT_04520 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RPIT_12330 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RPIT_08030 MFS transporter K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RPIT_04075 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RPIT_10040 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RPIT_08590 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D RPIT_07115 ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RPIT_08730 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D RPIT_06230 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RPIT_06820 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RPIT_06090 ribosome biogenesis GTPase Der K03977 engA; GTPase
D RPIT_07045 GTPase HflX K03665 hflX; GTPase
D RPIT_06715 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RPIT_06290 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RPIT_04605 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RPIT_04570 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D RPIT_04700 ribosome silencing factor K09710 ybeB; ribosome-associated protein
D RPIT_05000 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D RPIT_10465 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D RPIT_08695 metal-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:tfl03016]
D RPIT_08020 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPIT_03000 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPIT_04555 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RPIT_12195 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RPIT_04825 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RPIT_09730 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RPIT_02990 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RPIT_00650 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RPIT_12735 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RPIT_06260 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RPIT_06235 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RPIT_05690 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RPIT_00430 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RPIT_11265 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RPIT_08785 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RPIT_06275 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RPIT_08260 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RPIT_08255 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RPIT_08185 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RPIT_05405 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RPIT_01800 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RPIT_07980 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RPIT_11810 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RPIT_09450 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RPIT_08420 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RPIT_03430 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RPIT_03425 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RPIT_04610 tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RPIT_06540 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RPIT_06715 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RPIT_07055 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RPIT_13595 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RPIT_03470 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D RPIT_09500 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RPIT_05625 hypothetical protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RPIT_09470 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D RPIT_02540 glycine--tRNA ligase subunit alpha/beta K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RPIT_05680 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D RPIT_12260 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RPIT_08585 tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RPIT_08265 rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D RPIT_12330 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RPIT_06530 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RPIT_01810 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D RPIT_04980 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RPIT_01555 tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RPIT_10045 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RPIT_10035 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RPIT_10050 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RPIT_04640 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:tfl03012]
D RPIT_04600 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RPIT_08280 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RPIT_04500 translation elongation factor Ts K02357 tsf; elongation factor Ts
D RPIT_02985 translation elongation factor Tu K02358 tuf; elongation factor Tu
D RPIT_03440 elongation factor G K02355 fusA; elongation factor G
D RPIT_02960 translation elongation factor G K02355 fusA; elongation factor G
D RPIT_06725 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RPIT_04510 ribosome recycling factor K02838 frr; ribosome recycling factor
D RPIT_06720 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RPIT_10725 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RPIT_03345 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RPIT_06195 elongation factor P K02356 efp; elongation factor P
D RPIT_05290 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D RPIT_14780 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D RPIT_00100 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:tfl03110]
D RPIT_11800 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RPIT_01615 NDP-hexose 4-ketoreductase K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RPIT_08800 ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RPIT_11930 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RPIT_09965 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPIT_11200 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPIT_11920 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RPIT_04970 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RPIT_11925 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RPIT_14795 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein
D RPIT_14800 RNA-binding protein S4 K04762 hslR; ribosome-associated heat shock protein Hsp15
D RPIT_09970 co-chaperone GroES K04078 groES; chaperonin GroES
D RPIT_01565 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RPIT_06695 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RPIT_10065 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D RPIT_10820 hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D RPIT_02010 hypothetical protein K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D RPIT_03760 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RPIT_06645 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RPIT_13535 thioredoxin K03671 TXN; thioredoxin
D RPIT_09210 thiol reductase thioredoxin K03671 TXN; thioredoxin
D RPIT_06590 hypothetical protein K05838 ybbN; putative thioredoxin
D RPIT_01375 hypothetical protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D RPIT_02450 hypothetical protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:tfl04131]
D RPIT_08765 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RPIT_10655 flotillin K07192 FLOT; flotillin
D RPIT_12980 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RPIT_09190 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPIT_04210 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RPIT_11325 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RPIT_11330 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RPIT_04080 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RPIT_14175 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:tfl03051]
D RPIT_08015 hypothetical protein K13572 pafB; proteasome accessory factor B
D RPIT_08010 hypothetical protein K13573 pafC; proteasome accessory factor C
C 03032 DNA replication proteins [BR:tfl03032]
D RPIT_09735 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RPIT_09115 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RPIT_13605 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D RPIT_12965 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RPIT_05105 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RPIT_14505 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RPIT_14635 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D RPIT_06390 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RPIT_13635 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RPIT_04855 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RPIT_01475 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RPIT_03765 endonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPIT_03020 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPIT_01200 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RPIT_08555 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RPIT_04100 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RPIT_08925 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RPIT_13670 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RPIT_05495 DNA topoisomerase IV K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RPIT_13665 DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RPIT_05460 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RPIT_01455 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RPIT_12555 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tfl03036]
D RPIT_09115 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RPIT_08685 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RPIT_09190 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPIT_10655 flotillin K07192 FLOT; flotillin
D RPIT_01610 hypothetical protein K26249 lsr2; nucleoid-associated protein Lsr2
D RPIT_13605 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D RPIT_08670 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D RPIT_08040 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D RPIT_08035 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D RPIT_05295 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RPIT_04000 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RPIT_07120 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RPIT_04040 hypothetical protein K03589 ftsQ; cell division protein FtsQ
D RPIT_04025 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D RPIT_05300 cell division protein K09811 ftsX; cell division transport system permease protein
D RPIT_04045 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RPIT_04050 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D RPIT_08050 chromosome partitioning ATPase K03496 parA; chromosome partitioning protein
D RPIT_13570 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D RPIT_14630 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein
D RPIT_13565 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RPIT_13575 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RPIT_04485 recombinase XerC K03733 xerC; integrase/recombinase XerC
D RPIT_08070 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RPIT_10135 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RPIT_04205 DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:tfl03400]
D RPIT_12300 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RPIT_04755 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RPIT_10585 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RPIT_01985 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RPIT_13000 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RPIT_01380 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RPIT_10010 7,8-dihydro-8-oxoguanine triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RPIT_10310 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RPIT_02045 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RPIT_05550 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RPIT_07775 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RPIT_10380 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RPIT_10925 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RPIT_08680 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RPIT_00385 endonuclease VIII K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RPIT_08910 DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RPIT_08965 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D RPIT_00850 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RPIT_02760 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RPIT_14475 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RPIT_08925 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RPIT_04100 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RPIT_04165 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RPIT_04155 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RPIT_04175 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RPIT_09880 DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPIT_05435 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPIT_06915 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RPIT_02915 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RPIT_02920 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RPIT_03370 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RPIT_06155 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RPIT_10720 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RPIT_10520 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RPIT_10525 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RPIT_06390 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RPIT_13635 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RPIT_04855 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RPIT_01475 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RPIT_03765 endonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPIT_03020 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RPIT_01200 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RPIT_14505 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RPIT_14635 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D RPIT_06925 hypothetical protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D RPIT_06920 hypothetical protein K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D RPIT_06930 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RPIT_07085 recombinase RecA K03553 recA; recombination protein RecA
D RPIT_06325 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RPIT_06320 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RPIT_06330 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RPIT_06145 hypothetical protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RPIT_01655 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RPIT_13645 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RPIT_08390 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RPIT_08710 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RPIT_05055 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RPIT_01210 recombination protein RecR K06187 recR; recombination protein RecR
D RPIT_08090 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RPIT_12225 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D RPIT_05385 Ku protein K10979 ku; DNA end-binding protein Ku
D RPIT_00740 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RPIT_05425 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RPIT_13140 DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RPIT_00175 DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RPIT_13670 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RPIT_05495 DNA topoisomerase IV K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RPIT_13665 DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RPIT_05460 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RPIT_01455 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RPIT_12555 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RPIT_03955 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RPIT_09475 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RPIT_07035 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RPIT_03950 DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RPIT_07080 hypothetical protein K03565 recX; regulatory protein
D RPIT_07040 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RPIT_08960 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RPIT_08075 ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D RPIT_07020 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:tfl03029]
D RPIT_04600 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RPIT_08280 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RPIT_04500 translation elongation factor Ts K02357 tsf; elongation factor Ts
D RPIT_02985 translation elongation factor Tu K02358 tuf; elongation factor Tu
D RPIT_03440 elongation factor G K02355 fusA; elongation factor G
D RPIT_02960 translation elongation factor G K02355 fusA; elongation factor G
D RPIT_05015 GTPase Era K03595 era; GTPase
D RPIT_08185 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RPIT_04825 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RPIT_06260 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RPIT_00650 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RPIT_06510 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RPIT_06505 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RPIT_06515 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RPIT_14505 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RPIT_14635 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D RPIT_11930 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RPIT_11925 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RPIT_09965 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPIT_11200 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPIT_09970 co-chaperone GroES K04078 groES; chaperonin GroES
D RPIT_11920 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RPIT_04970 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RPIT_06540 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RPIT_10135 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RPIT_04300 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RPIT_04320 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RPIT_13585 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RPIT_13555 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D RPIT_06425 hypothetical protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tfl02000]
D RPIT_12890 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RPIT_12895 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RPIT_03910 protein tyrosine phosphatase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RPIT_02835 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RPIT_12175 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RPIT_14025 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RPIT_14150 iron ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RPIT_02840 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RPIT_12930 thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D RPIT_03555 glycerophosphodiester phosphodiesterase K15738 uup; ABC transport system ATP-binding/permease protein
D RPIT_06395 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RPIT_06400 iron transporter permease K02011 afuB; iron(III) transport system permease protein
D RPIT_06405 polyamine ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RPIT_01635 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D RPIT_01630 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D RPIT_01625 hypothetical protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D RPIT_11755 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RPIT_11750 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RPIT_11745 glycine/betaine ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D RPIT_11740 glycine betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RPIT_11735 glycine/betaine ABC transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D RPIT_11725 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RPIT_11730 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RPIT_11720 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RPIT_03520 hypothetical protein K24985 ribY; putative riboflavin transport system substrate-binding protein
D RPIT_03515 hypothetical protein K24986 ribX; putative riboflavin transport system permease protein
D RPIT_14840 ABC transporter substrate-binding protein K25086 musE; maltose transport system substrate-binding protein
D RPIT_14845 ABC transporter permease K25087 musF; maltose transport system permease protein
D RPIT_14850 sugar ABC transporter permease K25088 musG; maltose transport system permease protein
D RPIT_02085 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RPIT_02090 maltose ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RPIT_02095 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RPIT_03260 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RPIT_08865 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RPIT_11390 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RPIT_03255 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RPIT_08860 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RPIT_11395 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RPIT_03250 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RPIT_08855 ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RPIT_11400 thiamine ABC transporter ATP-binding protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RPIT_01900 sugar ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D RPIT_01895 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D RPIT_01890 sugar ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D RPIT_12220 carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D RPIT_12740 ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D RPIT_12745 ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D RPIT_12750 sugar ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D RPIT_11635 sugar ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RPIT_11645 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D RPIT_11640 sugar ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D RPIT_11995 sugar ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D RPIT_12840 hypothetical protein K23545 yphF; sugar transport system substrate-binding protein
D RPIT_12830 hypothetical protein K23546 yphD; sugar transport system permease protein
D RPIT_12835 hypothetical protein K23547 yphE; sugar transport system ATP-binding protein
D RPIT_02935 sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RPIT_11975 sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RPIT_02925 ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D RPIT_11980 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D RPIT_02930 ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RPIT_11985 ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RPIT_13270 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein
D RPIT_11495 BMP family ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RPIT_13280 dolichyl-phosphate beta-glucosyltransferase K10440 rbsC; ribose transport system permease protein
D RPIT_11500 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RPIT_11505 D-xylose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RPIT_13285 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RPIT_01295 LacI family transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RPIT_01305 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RPIT_01300 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RPIT_03300 hypothetical protein K17213 K17213; inositol transport system substrate-binding protein
D RPIT_03290 sugar ABC transporter permease K17214 K17214; inositol transport system permease protein
D RPIT_03295 D-xylose ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D RPIT_09785 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RPIT_09775 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RPIT_09770 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RPIT_09780 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RPIT_11680 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RPIT_11950 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RPIT_01060 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RPIT_05835 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RPIT_05020 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RPIT_05025 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RPIT_01065 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RPIT_05830 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RPIT_11955 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RPIT_11670 ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RPIT_05030 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RPIT_01070 ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RPIT_05825 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RPIT_11960 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RPIT_01770 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RPIT_01765 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RPIT_01760 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D RPIT_01755 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RPIT_04235 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D RPIT_04230 polar amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D RPIT_04245 glutamate ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D RPIT_00715 ABC transporter K02073 metQ; D-methionine transport system substrate-binding protein
D RPIT_00720 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RPIT_00725 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D RPIT_03380 sugar ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D RPIT_03385 sugar ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D RPIT_03390 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D RPIT_03395 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D RPIT_02900 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RPIT_02895 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RPIT_02890 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RPIT_14735 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RPIT_14730 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RPIT_14725 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RPIT_14720 methionine ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RPIT_14715 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RPIT_10030 ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D RPIT_10025 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D RPIT_10020 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D RPIT_12420 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RPIT_06855 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RPIT_12415 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RPIT_06850 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RPIT_06845 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RPIT_12410 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RPIT_06840 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RPIT_12405 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RPIT_10470 hypothetical protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D RPIT_10480 hypothetical protein K25283 yclO; iron-siderophore transport system permease protein
D RPIT_10475 iron ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein
D RPIT_10485 iron ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D RPIT_04440 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RPIT_05075 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein
D RPIT_05065 metal ABC transporter K09816 znuB; zinc transport system permease protein
D RPIT_05070 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RPIT_04180 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D RPIT_04190 hypothetical protein K16783 bioN; biotin transport system permease protein
D RPIT_04185 cobalt ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D RPIT_08510 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D RPIT_08515 cobalt ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RPIT_00525 hypothetical protein K09692 tagG; teichoic acid transport system permease protein
D RPIT_01240 hypothetical protein K09694 nodJ; lipooligosaccharide transport system permease protein
D RPIT_01235 ABC transporter K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D RPIT_12580 hypothetical protein K25149 narB; polyether ionophore transport system permease protein
D RPIT_12575 ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein
D RPIT_08460 hypothetical protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RPIT_05300 cell division protein K09811 ftsX; cell division transport system permease protein
D RPIT_05295 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RPIT_03680 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPIT_08645 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPIT_04325 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPIT_10350 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPIT_10770 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPIT_12495 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPIT_12600 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPIT_01045 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPIT_05890 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RPIT_10765 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPIT_12605 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPIT_03690 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPIT_08650 export ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPIT_12490 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPIT_04330 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPIT_01050 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPIT_05885 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPIT_10345 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPIT_04895 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPIT_02305 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPIT_02610 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RPIT_03875 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RPIT_13630 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RPIT_10975 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RPIT_02360 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RPIT_03870 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RPIT_13625 hypothetical protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RPIT_10980 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RPIT_02350 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RPIT_02355 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RPIT_04355 Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RPIT_04455 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RPIT_11775 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D RPIT_13015 MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D RPIT_08740 hypothetical protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D RPIT_12620 hypothetical protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D RPIT_10905 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RPIT_02150 nitrate transporter permease K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RPIT_02155 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RPIT_06255 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RPIT_14080 hypothetical protein K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein
D RPIT_14175 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family
D RPIT_12360 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D RPIT_07950 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RPIT_02065 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RPIT_01270 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RPIT_02060 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RPIT_05575 phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D RPIT_05945 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RPIT_05570 PTS sugar transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RPIT_01860 hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D RPIT_13150 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D RPIT_06295 potassium transporter Kef K10716 kch; voltage-gated potassium channel
D RPIT_01515 ammonia channel protein K03320 amt; ammonium transporter, Amt family
D RPIT_07835 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D RPIT_07865 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D RPIT_05170 magnesium chelatase K07114 yfbK; Ca-activated chloride channel homolog
D RPIT_05175 magnesium chelatase K07114 yfbK; Ca-activated chloride channel homolog
D RPIT_11045 mechanosensitive ion channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D RPIT_13105 hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel
D RPIT_01530 hypothetical protein K06199 crcB; fluoride exporter
D RPIT_01535 hypothetical protein K06199 crcB; fluoride exporter
D RPIT_09800 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RPIT_11570 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RPIT_05010 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RPIT_11575 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RPIT_07665 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D RPIT_11855 hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family
D RPIT_13230 ligand-binding protein SH3 K11741 sugE; quaternary ammonium compound-resistance protein SugE
D RPIT_13235 ligand-binding protein SH3 K11741 sugE; quaternary ammonium compound-resistance protein SugE
D RPIT_05670 EamA family transporter K11939 rhtA; inner membrane transporter RhtA
D RPIT_04390 hypothetical protein K05786 rarD; chloramphenicol-sensitive protein RarD
D RPIT_07885 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D RPIT_02475 sodium:proton antiporter K07084 yuiF; putative amino acid transporter
D RPIT_05480 lactate permease K03303 lutP; lactate permease
D RPIT_04650 hypothetical protein K05020 opuD; glycine betaine transporter
D RPIT_14580 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D RPIT_05115 cation acetate symporter K14393 actP; cation/acetate symporter
D RPIT_09815 cation acetate symporter K14393 actP; cation/acetate symporter
D RPIT_13700 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D RPIT_00630 ATPase K03498 trkH; trk/ktr system potassium uptake protein
D RPIT_00635 potassium transporter K03499 trkA; trk/ktr system potassium uptake protein
D RPIT_05590 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RPIT_05595 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RPIT_00910 permease K24206 uacT; uric acid transporter
D RPIT_11150 permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RPIT_14160 hypothetical protein K07240 chrA; chromate transporter
D RPIT_00770 hypothetical protein K03321 TC.SULP; sulfate permease, SulP family
D RPIT_14820 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family
D RPIT_12980 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RPIT_14470 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D RPIT_14465 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D RPIT_14460 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D RPIT_14455 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D RPIT_14450 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D RPIT_14445 hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D RPIT_13120 murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RPIT_11605 murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RPIT_06990 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D RPIT_02390 hypothetical protein K24180 mleP; malate permease and related proteins
D RPIT_02395 hypothetical protein K24180 mleP; malate permease and related proteins
D RPIT_00320 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D RPIT_00315 branched-chain amino acid transporter AzlD K26606 azlD; branched chain amino acid efflux pump
D RPIT_14700 hypothetical protein K20469 K20469; putative heme transporter
D RPIT_11335 hypothetical protein K20469 K20469; putative heme transporter
D RPIT_04985 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D RPIT_06010 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D RPIT_04025 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D RPIT_13065 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D RPIT_10250 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RPIT_10245 hypothetical protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RPIT_10240 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RPIT_01715 cytochrome C biogenesis protein ResC K06196 ccdA; cytochrome c-type biogenesis protein
D RPIT_07255 cytochrome C biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D RPIT_02130 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D RPIT_02135 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D RPIT_02145 respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D RPIT_10830 dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D RPIT_13945 hypothetical protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D RPIT_13725 hypothetical protein K04758 feoA; ferrous iron transport protein A
D RPIT_13730 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B
D RPIT_14855 hypothetical protein K25089 musI; membrane protein
C 02044 Secretion system [BR:tfl02044]
D RPIT_03740 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RPIT_01405 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RPIT_14230 secretion protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RPIT_01410 hypothetical protein K12510 tadB; tight adherence protein B
D RPIT_04055 hypothetical protein K02221 yggT; YggT family protein
D RPIT_04830 hypothetical protein K02237 comEA; competence protein ComEA
D RPIT_13650 cell division protein DedD K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RPIT_13890 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RPIT_04835 hypothetical protein K02238 comEC; competence protein ComEC
D RPIT_02190 hypothetical protein K07344 trbL; type IV secretion system protein TrbL
D RPIT_00410 hypothetical protein K14956 esx; ESAT-6 family protein
D RPIT_05355 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RPIT_06310 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RPIT_06305 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RPIT_04250 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RPIT_03190 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RPIT_08665 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RPIT_06315 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RPIT_13585 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RPIT_08005 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D RPIT_10140 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D RPIT_08000 twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:tfl02042]
D RPIT_09800 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RPIT_11570 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RPIT_05010 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RPIT_11575 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RPIT_14830 hemolysin III K11068 hlyIII; hemolysin III
D RPIT_10540 hemolysin K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:tfl02022]
D RPIT_11315 hypothetical protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D RPIT_11310 DNA-binding response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RPIT_00325 hypothetical protein K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RPIT_00330 DNA-binding response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D RPIT_05335 two-component sensor histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RPIT_05330 DNA-binding response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D RPIT_12145 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RPIT_12140 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RPIT_07015 helix-turn-helix transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RPIT_04090 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:tfl02035]
D RPIT_03740 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RPIT_01405 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RPIT_14230 secretion protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tfl04812]
D RPIT_04045 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RPIT_08050 chromosome partitioning ATPase K03496 parA; chromosome partitioning protein
D RPIT_13570 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D RPIT_14630 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein
D RPIT_13565 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tfl04147]
D RPIT_09190 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RPIT_10705 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RPIT_04210 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RPIT_04215 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RPIT_04080 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RPIT_03760 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RPIT_10655 flotillin K07192 FLOT; flotillin
D RPIT_09965 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPIT_11200 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RPIT_11930 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RPIT_00620 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RPIT_09950 inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RPIT_09955 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RPIT_02985 translation elongation factor Tu K02358 tuf; elongation factor Tu
D RPIT_07980 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RPIT_11810 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RPIT_09450 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RPIT_08420 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RPIT_11905 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RPIT_04455 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RPIT_14480 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPIT_08990 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPIT_01950 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RPIT_01925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RPIT_09555 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RPIT_06300 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RPIT_08195 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RPIT_00465 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RPIT_02550 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RPIT_06775 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RPIT_06560 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RPIT_11340 1,4-alpha-glucan branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RPIT_13145 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RPIT_03500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPIT_03540 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RPIT_04735 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RPIT_06830 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RPIT_09845 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RPIT_03585 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_05955 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_11435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RPIT_04270 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RPIT_04220 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RPIT_11325 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RPIT_11330 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:tfl02048]
D RPIT_10865 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RPIT_10855 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RPIT_10850 DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RPIT_09115 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RPIT_09345 hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D RPIT_09340 hypothetical protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D RPIT_10860 restriction endonuclease K07448 mrr; restriction system protein
D RPIT_04930 hypothetical protein K26983 mazE3; antitoxin MazE3
D RPIT_09920 hypothetical protein K03973 pspC; phage shock protein C
D RPIT_13465 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D RPIT_13460 CopG family transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4
D RPIT_05925 alcohol dehydrogenase K07341 doc; death on curing protein
D RPIT_10425 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D RPIT_10445 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D RPIT_10440 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D RPIT_10420 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D RPIT_07810 toxin-antitoxin system antitoxin subunit K21495 fitA; antitoxin FitA
D RPIT_07650 hypothetical protein K21495 fitA; antitoxin FitA
D RPIT_04045 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RPIT_08020 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPIT_03000 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RPIT_06540 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:tfl01504]
D RPIT_14600 aminoglycoside O-phosphotransferase APH(3'')-Ib K10673 strA; streptomycin 3"-kinase [EC:2.7.1.87]
D RPIT_14605 aminoglycoside O-phosphotransferase APH(6)-Id K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D RPIT_14080 hypothetical protein K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein
D RPIT_10435 lincomycin resistance protein LmrB K19545 lnuA_C_D_E; lincosamide nucleotidyltransferase A/C/D/E
D RPIT_14665 sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D RPIT_13010 hypothetical protein K18555 qnr; fluoroquinolone resistance protein
D RPIT_14785 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tfl03100]
D RPIT_13505 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPIT_11015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPIT_04750 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RPIT_09055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPIT_06760 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPIT_12295 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPIT_11080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RPIT_05130 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RPIT_02465 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RPIT_05655 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RPIT_07920 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RPIT_07915 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RPIT_02470 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RPIT_00685 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RPIT_08830 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RPIT_05650 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RPIT_09065 tRNA-His K14226 tRNA-His; tRNA His
D RPIT_13680 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RPIT_04085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPIT_12460 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPIT_10645 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPIT_09465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPIT_08345 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RPIT_02495 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RPIT_09315 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RPIT_05150 tRNA-Met K14230 tRNA-Met; tRNA Met
D RPIT_02795 tRNA-Met K14230 tRNA-Met; tRNA Met
D RPIT_06875 tRNA-Met K14230 tRNA-Met; tRNA Met
D RPIT_02460 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RPIT_08885 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RPIT_06080 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RPIT_01350 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RPIT_12240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPIT_12325 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPIT_12305 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPIT_01165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RPIT_02790 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RPIT_11220 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RPIT_01495 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RPIT_02845 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RPIT_02780 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RPIT_05645 tRNA-Val K14237 tRNA-Val; tRNA Val
D RPIT_05275 tRNA-Val K14237 tRNA-Val; tRNA Val
D RPIT_05660 tRNA-Val K14237 tRNA-Val; tRNA Val
D RPIT_08175 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RPIT_08135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RPIT_08130 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RPIT_08170 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RPIT_08125 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RPIT_08165 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RPIT_01195 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D RPIT_03470 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D RPIT_05320 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RPIT_14570 hypothetical protein K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D RPIT_01440 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D RPIT_11780 dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D RPIT_02625 drug:proton antiporter K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D RPIT_09700 NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RPIT_01740 mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D RPIT_10595 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RPIT_05635 peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RPIT_03005 glutathione-dependent reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D RPIT_04375 hypothetical protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D RPIT_10070 hypothetical protein K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D RPIT_09410 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RPIT_01815 lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RPIT_03695 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RPIT_01280 hypothetical protein K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D RPIT_12990 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RPIT_12985 phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RPIT_02970 pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RPIT_10370 hypothetical protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RPIT_11190 hypothetical protein K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D RPIT_09980 maltose acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D RPIT_01785 mycothiol synthase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D RPIT_05990 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RPIT_10290 GNAT family N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D RPIT_00380 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RPIT_12515 hypothetical protein K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D RPIT_07290 diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RPIT_14325 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RPIT_03510 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D RPIT_06060 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D RPIT_03775 hypothetical protein K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D RPIT_00105 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D RPIT_05230 hypothetical protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D RPIT_08065 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RPIT_08985 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RPIT_06865 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D RPIT_04705 hypothetical protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D RPIT_05400 phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RPIT_01520 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RPIT_10955 AraC family transcriptional regulator K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RPIT_00930 hypothetical protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D RPIT_06620 endonuclease K07503 nucS; endonuclease [EC:3.1.-.-]
D RPIT_14765 hypothetical protein K01180 E3.2.1.6; endo-1,3(4)-beta-glucanase [EC:3.2.1.6]
D RPIT_13175 hypothetical protein K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D RPIT_14690 1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D RPIT_04480 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RPIT_14280 N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D RPIT_00710 hypothetical protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RPIT_10560 mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D RPIT_03980 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RPIT_05160 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RPIT_02885 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D RPIT_10075 NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RPIT_11475 RbsD or FucU transport K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D RPIT_12845 N-acylglucosamine 2-epimerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D RPIT_14390 N-acylglucosamine 2-epimerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D RPIT_08310 cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D RPIT_08190 acetyl-CoA carboxyl transferase K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D RPIT_08445 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D RPIT_12680 haloacid dehalogenase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D RPIT_14125 cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D RPIT_03820 magnesium-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D RPIT_03305 protein iolH K06605 iolH; myo-inositol catabolism protein IolH
D RPIT_11385 glycosyl hydrolase K17641 bxlA; beta-xylosidase
D RPIT_05475 Fe-S oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D RPIT_05470 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D RPIT_05465 lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D RPIT_04365 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RPIT_05180 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein
D RPIT_09180 N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D RPIT_04580 hypothetical protein K21688 rpfB; resuscitation-promoting factor RpfB
C 99987 Cofactor metabolism
D RPIT_02110 ABC transporter K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
D RPIT_12135 hypothetical protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RPIT_11165 cold-shock protein K03704 cspA; cold shock protein
C 99974 Translation
D RPIT_10640 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D RPIT_09515 ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RPIT_08820 trigger factor K03545 tig; trigger factor
D RPIT_05310 SsrA-binding protein K03664 smpB; SsrA-binding protein
D RPIT_02440 hypothetical protein K07399 resB; cytochrome c biogenesis protein
D RPIT_01720 cytochrome C biogenesis protein K07399 resB; cytochrome c biogenesis protein
D RPIT_13735 hypothetical protein K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D RPIT_13715 hypothetical protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D RPIT_10500 hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D RPIT_08545 hypothetical protein K07460 yraN; putative endonuclease
D RPIT_06640 hypothetical protein K07461 K07461; putative endonuclease
D RPIT_08535 DNA protecting protein DprA K04096 smf; DNA processing protein
D RPIT_06250 AAA family ATPase K07478 ycaJ; putative ATPase
D RPIT_05585 hypothetical protein K07482 K07482; transposase, IS30 family
D RPIT_07325 hypothetical protein K07483 K07483; transposase
D RPIT_02265 hypothetical protein K07483 K07483; transposase
D RPIT_02335 hypothetical protein K07483 K07483; transposase
D RPIT_08375 transposase K07483 K07483; transposase
D RPIT_13995 transposase K07483 K07483; transposase
D RPIT_07530 transposase K07483 K07483; transposase
D RPIT_00215 ISL3 family transposase K07485 K07485; transposase
D RPIT_00220 ISL3 family transposase K07485 K07485; transposase
D RPIT_07450 ISL3 family transposase K07485 K07485; transposase
D RPIT_13390 IS110 family transposase K07486 K07486; transposase
D RPIT_14100 hypothetical protein K07486 K07486; transposase
D RPIT_00540 IS110 family transposase K07486 K07486; transposase
D RPIT_05265 hypothetical protein K07486 K07486; transposase
D RPIT_14415 hypothetical protein K07486 K07486; transposase
D RPIT_01910 hypothetical protein K07486 K07486; transposase
D RPIT_02020 hypothetical protein K07486 K07486; transposase
D RPIT_06635 hypothetical protein K07486 K07486; transposase
D RPIT_02325 hypothetical protein K07486 K07486; transposase
D RPIT_07220 hypothetical protein K07486 K07486; transposase
D RPIT_08405 hypothetical protein K07493 K07493; putative transposase
D RPIT_14010 IS256 family transposase K07493 K07493; putative transposase
D RPIT_00225 IS256 family transposase K07493 K07493; putative transposase
D RPIT_14000 transposase K07497 K07497; putative transposase
D RPIT_02260 hypothetical protein K07497 K07497; putative transposase
D RPIT_02330 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D RPIT_03615 phage shock protein A K03969 pspA; phage shock protein A
D RPIT_01205 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RPIT_05005 transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RPIT_04780 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RPIT_14375 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RPIT_05225 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RPIT_14085 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RPIT_13240 transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D RPIT_13580 single-stranded DNA-binding protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D RPIT_01845 GTP-binding protein TypA K06207 typA; GTP-binding protein
D RPIT_04995 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RPIT_10545 ATP-binding protein K07175 phoH2; PhoH-like ATPase
D RPIT_03025 hypothetical protein K07182 K07182; CBS domain-containing protein
D RPIT_02770 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D RPIT_08815 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D RPIT_11320 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D RPIT_13220 transporter K05794 terC; tellurite resistance protein TerC
D RPIT_11185 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RPIT_07145 hypothetical protein K02348 elaA; ElaA protein
D RPIT_05235 PHP domain-containing protein K04477 ycdX; putative hydrolase
D RPIT_01420 helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D RPIT_09940 globin K06886 glbN; hemoglobin
D RPIT_03535 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily
D RPIT_13160 transporter K06994 K06994; putative drug exporter of the RND superfamily
D RPIT_13395 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily
D RPIT_02535 hypothetical protein K07001 K07001; NTE family protein
D RPIT_13005 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D RPIT_09085 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D RPIT_04340 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D RPIT_04345 Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D RPIT_02710 ribonuclease BN K07058 K07058; membrane protein
D RPIT_05750 hypothetical protein K07058 K07058; membrane protein
D RPIT_05980 hypothetical protein K07113 fxsA; UPF0716 protein FxsA
D RPIT_10210 hypothetical protein K07146 K07146; UPF0176 protein
D RPIT_00505 VOC family protein K04750 phnB; PhnB protein
D RPIT_11590 hypothetical protein K03744 lemA; LemA protein
D RPIT_13155 hypothetical protein K01421 yhgE; putative membrane protein
D RPIT_12530 hypothetical protein K08972 K08972; putative membrane protein
D RPIT_00695 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D RPIT_12485 hypothetical protein K08981 K08981; putative membrane protein
D RPIT_00660 hypothetical protein K08981 K08981; putative membrane protein
D RPIT_01940 hypothetical protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D RPIT_10550 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein
D RPIT_09075 phospholipase K06889 K06889; uncharacterized protein
D RPIT_11465 lysophospholipase K06889 K06889; uncharacterized protein
D RPIT_09280 ketosteroid isomerase K06893 K06893; uncharacterized protein
D RPIT_12630 hypothetical protein K06907 FI; Bacteriophage tail sheath protein
D RPIT_08595 hypothetical protein K06960 K06960; uncharacterized protein
D RPIT_05685 hypothetical protein K06975 K06975; uncharacterized protein
D RPIT_04550 hypothetical protein K06976 K06976; uncharacterized protein
D RPIT_04475 hypothetical protein K07004 K07004; uncharacterized protein
D RPIT_06980 hypothetical protein K07005 K07005; uncharacterized protein
D RPIT_00825 glyoxalase K07032 K07032; uncharacterized protein
D RPIT_03210 hypothetical protein K07054 K07054; uncharacterized protein
D RPIT_10625 hypothetical protein K07054 K07054; uncharacterized protein
D RPIT_02975 VapC toxin family PIN domain ribonuclease K07064 K07064; uncharacterized protein
D RPIT_14140 TIGR01777 family protein K07071 K07071; uncharacterized protein
D RPIT_14755 hypothetical protein K07089 K07089; uncharacterized protein
D RPIT_03325 hypothetical protein K07090 K07090; uncharacterized protein
D RPIT_03100 hypothetical protein K07090 K07090; uncharacterized protein
D RPIT_00020 permease K07090 K07090; uncharacterized protein
D RPIT_02775 hypothetical protein K07090 K07090; uncharacterized protein
D RPIT_04935 YfcE family phosphodiesterase K07095 K07095; uncharacterized protein
D RPIT_01355 phosphoesterase K07098 K07098; uncharacterized protein
D RPIT_10285 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D RPIT_12165 sulfur transporter K07112 K07112; uncharacterized protein
D RPIT_14405 short-chain dehydrogenase K07124 K07124; uncharacterized protein
D RPIT_01735 hypothetical protein K07124 K07124; uncharacterized protein
D RPIT_07385 AAA family ATPase K07133 K07133; uncharacterized protein
D RPIT_07410 hypothetical protein K07133 K07133; uncharacterized protein
D RPIT_03575 hypothetical protein K07150 K07150; uncharacterized protein
D RPIT_03460 hypothetical protein K07164 K07164; uncharacterized protein
D RPIT_13590 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D RPIT_05740 hypothetical protein K08999 K08999; uncharacterized protein
D RPIT_10695 septum formation initiator family protein K09009 K09009; uncharacterized protein
D RPIT_05285 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein
D RPIT_06895 hypothetical protein K09118 K09118; uncharacterized protein
D RPIT_12480 hypothetical protein K09167 K09167; uncharacterized protein
D RPIT_00665 hypothetical protein K09167 K09167; uncharacterized protein
D RPIT_04945 hypothetical protein K09702 K09702; uncharacterized protein
D RPIT_13375 ABC transporter K09781 K09781; uncharacterized protein
D RPIT_09570 hypothetical protein K09791 K09791; uncharacterized protein
D RPIT_00855 hypothetical protein K09793 K09793; uncharacterized protein
D RPIT_14555 hypothetical protein K09807 K09807; uncharacterized protein
D RPIT_14380 peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D RPIT_12210 hypothetical protein K09915 K09915; uncharacterized protein
D RPIT_03745 hypothetical protein K09927 K09927; uncharacterized protein
D RPIT_13410 hypothetical protein K09992 K09992; uncharacterized protein
D RPIT_04595 hypothetical protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 3, 2024