+D	GENES	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a> &nbsp; KEGG Orthology (KO) - Thermobifida fusca </h2>
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A09100 Metabolism
B
B  09101 Carbohydrate metabolism
C    00010 Glycolysis / Gluconeogenesis [PATH:tfu00010]
D      Tfu_1033 glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      Tfu_0273 glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      Tfu_2004 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      Tfu_2508 conserved hypothetical protein	K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D      Tfu_1037 pyrophosphate-dependent phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      Tfu_0464 GlpX	K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D      Tfu_3010 fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      Tfu_2015 triosephosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      Tfu_2017 glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      Tfu_2016 phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      Tfu_2911 phosphoglycerate mutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      Tfu_0428 enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Tfu_1179 pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      Tfu_0863 pyruvate phosphate dikinase	K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D      Tfu_3049 pyruvate dehydrogenase (lipoamide)	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      Tfu_3050 dehydrogenase complex, E1 component, beta subunit	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      Tfu_3051 pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      Tfu_0993 2-oxoglutarate dehydrogenase E2 component	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      Tfu_0994 dihydrolipoamide dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Tfu_2674 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      Tfu_2675 putative oxidoreductase	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      Tfu_1270 alcohol dehydrogenase class III	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      Tfu_1775 putative alcohol dehydrogenase (zinc-binding)	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      Tfu_2771 putative dehydrogenase	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      Tfu_1489 oxidoreductase	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_2808 putative acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_2856 acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_1546 putative acyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_1302 probable 6-carboxyhexanoate--COA ligase	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Tfu_1473 putative pimeloyl-CoA synthetase	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Tfu_1083 putative aldose-1-epimerase	K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D      Tfu_1811 Polyphosphate glucokinase	K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D      Tfu_0083 phosphoenolpyruvate carboxykinase (GTP)	K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D      Tfu_2768 6-phospho-beta-glucosidase	K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D      Tfu_2489 putative phosphoenolpyruvate-dependent sugar phosphotransferase	K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C    00020 Citrate cycle (TCA cycle) [PATH:tfu00020]
D      Tfu_0247 citrate synthase	K01647 CS; citrate synthase [EC:2.3.3.1]
D      Tfu_1925 aconitase	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      Tfu_2568 isocitrate dehydrogenase (NADP)	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      Tfu_0566 2-oxoglutarate dehydrogenase E1 component	K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D      Tfu_0994 dihydrolipoamide dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Tfu_2674 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      Tfu_2675 putative oxidoreductase	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      Tfu_2576 succinyl-CoA synthetase (ADP-forming) alpha subunit	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      Tfu_2577 succinyl-CoA synthetase (ADP-forming) beta subunit	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      Tfu_2452 succinate dehydrogenase subunit A	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      Tfu_2451 succinate dehydrogenase subunit B	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      Tfu_2453 succinate dehydrogenase subunit C	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      Tfu_0459 fumarase	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      Tfu_0092 malate dehydrogenase (NAD)	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      Tfu_0083 phosphoenolpyruvate carboxykinase (GTP)	K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D      Tfu_3049 pyruvate dehydrogenase (lipoamide)	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      Tfu_3050 dehydrogenase complex, E1 component, beta subunit	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      Tfu_3051 pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      Tfu_0993 2-oxoglutarate dehydrogenase E2 component	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C    00030 Pentose phosphate pathway [PATH:tfu00030]
D      Tfu_2004 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      Tfu_2508 conserved hypothetical protein	K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D      Tfu_2005 glucose-6-phosphate 1-dehydrogenase	K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D      Tfu_2007 6-phosphogluconolactonase	K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D      Tfu_2315 putative secreted protein	K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D      Tfu_0003 6-phosphogluconate dehydrogenase (decarboxylating)	K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D      Tfu_1077 ribulose-5-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D      Tfu_2002 transketolase	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      Tfu_2003 transaldolase	K00616 TALDO1; transaldolase [EC:2.2.1.2]
D      Tfu_2202 ribose/galactose isomerase:Ribose 5-phosphate isomerase, actinobacteria	K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D      Tfu_2970 fructose-6-phosphate phosphoketolase	K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D      Tfu_0259 ribokinase, bacterial	K00852 rbsK; ribokinase [EC:2.7.1.15]
D      Tfu_0415 ribose-phosphate pyrophosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      Tfu_0188 2-keto-3-deoxy-phosphogluconate aldolase	K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D      Tfu_2814 putative dehydrogenase	K22969 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D      Tfu_2114 gluconate kinase	K00851 idnK; gluconokinase [EC:2.7.1.12]
D      Tfu_0189 putative PfkB-family carbohydrate kinase	K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D      Tfu_3010 fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      Tfu_0464 GlpX	K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D      Tfu_1037 pyrophosphate-dependent phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C    00040 Pentose and glucuronate interconversions [PATH:tfu00040]
D      Tfu_0153 pectate lyase/Amb allergen	K01728 pel; pectate lyase [EC:4.2.2.2]
D      Tfu_2168 pectate lyase	K01728 pel; pectate lyase [EC:4.2.2.2]
D      Tfu_1298 2-deoxy-D-gluconate 3-dehydrogenase	K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D      Tfu_2544 UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      Tfu_0373 UDP-glucose pyrophosphorylase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      Tfu_1077 ribulose-5-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D      Tfu_1604 xylulokinase	K00854 xylB; xylulokinase [EC:2.7.1.17]
D      Tfu_1575 putative sugar kinase protein	K00854 xylB; xylulokinase [EC:2.7.1.17]
D      Tfu_1603 xylose isomerase	K01805 xylA; xylose isomerase [EC:5.3.1.5]
C    00051 Fructose and mannose metabolism [PATH:tfu00051]
D      Tfu_0900 Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5	K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D      Tfu_0928 fructokinase	K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D      Tfu_0016 mannose-6-phosphate isomerase	K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D      Tfu_2508 conserved hypothetical protein	K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D      Tfu_2510 phosphomannomutase	K01840 manB; phosphomannomutase [EC:5.4.2.8]
D      Tfu_1394 mannose-1-phosphate guanylyltransferase / phosphomannomutase	K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D      Tfu_1037 pyrophosphate-dependent phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      Tfu_0464 GlpX	K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D      Tfu_0696 putative 6-phosphofructokinase : 1-phosphofructokinase	K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D      Tfu_1603 xylose isomerase	K01805 xylA; xylose isomerase [EC:5.3.1.5]
D      Tfu_3010 fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      Tfu_2015 triosephosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      Tfu_2202 ribose/galactose isomerase:Ribose 5-phosphate isomerase, actinobacteria	K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D      Tfu_2488 HAD-superfamily hydrolase subfamily IA, variant 3	K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
C    00052 Galactose metabolism [PATH:tfu00052]
D      Tfu_1083 putative aldose-1-epimerase	K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D      Tfu_2566 galactokinase	K00849 galK; galactokinase [EC:2.7.1.6]
D      Tfu_2723 putative epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Tfu_2591 UDP-galactose 4-epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Tfu_0169 nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase)	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Tfu_1622 UDP-glucose 4-epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Tfu_0373 UDP-glucose pyrophosphorylase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      Tfu_1033 glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      Tfu_0273 glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      Tfu_1615 beta-galactosidase	K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D      Tfu_1037 pyrophosphate-dependent phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      Tfu_1786 galactonate dehydratase	K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D      Tfu_0833 alpha-glucosidase. Glycosyl Hydrolase family 13	K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C    00053 Ascorbate and aldarate metabolism [PATH:tfu00053]
D      Tfu_2544 UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1718 putative dihydrodipicolinate synthase	K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D      Tfu_1140 conserved hypothetical protein	K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C    00500 Starch and sucrose metabolism [PATH:tfu00500]
D      Tfu_0833 alpha-glucosidase. Glycosyl Hydrolase family 13	K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D      Tfu_0373 UDP-glucose pyrophosphorylase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      Tfu_1607 exo-1,4-beta-glucosidase	K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D      Tfu_1629 beta-glucosidase	K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D      Tfu_0937 beta-glucosidase. Glycosyl Hydrolase family 1	K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D      Tfu_2712 Cellulase. Glycosyl Hydrolase family 5	K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D      Tfu_2176 endoglucanase. Glycosyl Hydrolase family 9	K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D      Tfu_0901 Cellulase. Glycosyl Hydrolase family 5	K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D      Tfu_1074 endoglucanase. Glycosyl Hydrolase family 6	K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D      Tfu_1627 cellulose 1,4-beta-cellobiosidase / endoglucanase. Glycosyl Hydrolase family 9	K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D      Tfu_0620 cellobiohydrolase. Glycosyl Hydrolase family 6	K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D      Tfu_2768 6-phospho-beta-glucosidase	K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D      Tfu_0582 1,4-alpha-glucan branching enzyme	K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D      Tfu_0586 alpha-glucan phosphorylase	K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D      Tfu_0985 alpha amylase, C-terminal all-beta:Alpha amylase, catalytic subdomain	K01176 AMY; alpha-amylase [EC:3.2.1.1]
D      Tfu_0584 trehalose synthase. Glycosyl Hydrolase family 13	K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D      Tfu_2205 glycoside hydrolase, family 77	K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D      Tfu_0583 putative pep2 protein	K16146 pep2; maltokinase [EC:2.7.1.175]
D      Tfu_0585 alpha amylase, catalytic subdomain	K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D      Tfu_2489 putative phosphoenolpyruvate-dependent sugar phosphotransferase	K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D      Tfu_1891 glycogen debranching enzyme GlgX	K01214 ISA; isoamylase [EC:3.2.1.68]
D      Tfu_0225 alpha,alpha-trehalose-phosphate synthase (UDP-forming)	K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D      Tfu_0224 trehalose-phosphatase:HAD-superfamily hydrolase subfamily IIB	K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D      Tfu_0046 conserved hypothetical protein	K22934 E3.2.1.28; alpha,alpha-trehalase [EC:3.2.1.28]
D      Tfu_1033 glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      Tfu_0273 glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      Tfu_2004 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      Tfu_2508 conserved hypothetical protein	K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D      Tfu_0928 fructokinase	K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C    00520 Amino sugar and nucleotide sugar metabolism [PATH:tfu00520]
D      Tfu_0580 chitinase. Glycosyl Hydrolase family 18	K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D      Tfu_0868 chitinase. Glycosyl Hydrolase family 18	K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D      Tfu_2486 beta-N-acetylhexosaminidase. Glycosyl Hydrolase family 3	K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D      Tfu_2489 putative phosphoenolpyruvate-dependent sugar phosphotransferase	K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D      Tfu_2473 N-acetylglucosamine 6-phosphate deacetylase	K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D      Tfu_0928 fructokinase	K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D      Tfu_2611 glutamine--fructose-6-phosphate transaminase	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      Tfu_2612 phosphoglucosamine mutase	K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D      Tfu_0414 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase	K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D      Tfu_2324 putative phophosugar-binding protein	K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D      Tfu_3016 UDP-N-acetylglucosamine 1-carboxyvinyltransferase	K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D      Tfu_2664 UDP-N-acetylmuramate dehydrogenase	K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D      Tfu_0010 N-acetylneuraminate synthase	K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D      Tfu_2529 putative UDP-glucose/GDP-mannose dehydrogenase	K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D      Tfu_1616 alpha-L-arabinofuranosidase	K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D      Tfu_1033 glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      Tfu_0273 glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      Tfu_1811 Polyphosphate glucokinase	K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D      Tfu_0373 UDP-glucose pyrophosphorylase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      Tfu_2544 UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      Tfu_2566 galactokinase	K00849 galK; galactokinase [EC:2.7.1.6]
D      Tfu_2723 putative epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Tfu_2591 UDP-galactose 4-epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Tfu_0169 nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase)	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Tfu_1622 UDP-glucose 4-epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Tfu_2004 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      Tfu_2508 conserved hypothetical protein	K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D      Tfu_0016 mannose-6-phosphate isomerase	K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D      Tfu_2510 phosphomannomutase	K01840 manB; phosphomannomutase [EC:5.4.2.8]
D      Tfu_1394 mannose-1-phosphate guanylyltransferase / phosphomannomutase	K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
C    00620 Pyruvate metabolism [PATH:tfu00620]
D      Tfu_2808 putative acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_2856 acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_1546 putative acyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_2674 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      Tfu_2675 putative oxidoreductase	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      Tfu_3049 pyruvate dehydrogenase (lipoamide)	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      Tfu_3050 dehydrogenase complex, E1 component, beta subunit	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      Tfu_3051 pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      Tfu_0993 2-oxoglutarate dehydrogenase E2 component	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      Tfu_0994 dihydrolipoamide dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Tfu_2771 putative dehydrogenase	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      Tfu_1489 oxidoreductase	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      Tfu_1270 alcohol dehydrogenase class III	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      Tfu_1775 putative alcohol dehydrogenase (zinc-binding)	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      Tfu_2971 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      Tfu_1179 pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      Tfu_1513 biotin carboxyl carrier protein	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      Tfu_1228 putative acyl-CoA carboxylase complex A subunit	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Tfu_2557 putative acyl-CoA carboxylase, alpha subunit	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Tfu_0653 acylphosphatase	K01512 acyP; acylphosphatase [EC:3.6.1.7]
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1302 probable 6-carboxyhexanoate--COA ligase	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Tfu_1473 putative pimeloyl-CoA synthetase	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Tfu_2087 possible hydrolase	K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D      Tfu_3085 Rhodanese-like protein	K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D      Tfu_0562 malate dehydrogenase (oxaloacetate decarboxylating)	K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D      Tfu_2390 malate dehydrogenase (oxaloacetate decarboxylating)	K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D      Tfu_0092 malate dehydrogenase (NAD)	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      Tfu_0459 fumarase	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      Tfu_2554 Phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      Tfu_0083 phosphoenolpyruvate carboxykinase (GTP)	K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D      Tfu_0863 pyruvate phosphate dikinase	K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D      Tfu_0819 malate synthase A	K01638 aceB; malate synthase [EC:2.3.3.9]
D      Tfu_0253 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0436 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2394 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1520 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0850 yeast 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D      Tfu_0617 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C    00630 Glyoxylate and dicarboxylate metabolism [PATH:tfu00630]
D      Tfu_1377 isocitrate lyase	K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D      Tfu_2808 putative acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_2856 acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_1546 putative acyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_0819 malate synthase A	K01638 aceB; malate synthase [EC:2.3.3.9]
D      Tfu_0092 malate dehydrogenase (NAD)	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      Tfu_0247 citrate synthase	K01647 CS; citrate synthase [EC:2.3.3.1]
D      Tfu_1925 aconitase	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      Tfu_0253 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0436 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2394 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1520 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2395 methylmalonyl-CoA epimerase	K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D      Tfu_1228 putative acyl-CoA carboxylase complex A subunit	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Tfu_2557 putative acyl-CoA carboxylase, alpha subunit	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Tfu_2555 propionyl-CoA carboxylase complex B subunit	K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D      Tfu_2556 conserved hypothetical protein	K27095 accE5; acyl-CoA carboxylase epsilon subunit
D      Tfu_2762 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      Tfu_2761 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      Tfu_1649 catalase	K03781 katE; catalase [EC:1.11.1.6]
D      Tfu_0982 L-glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Tfu_0988 L-glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Tfu_2353 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      Tfu_1398 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit	K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D      Tfu_2351 aminomethyltransferase	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      Tfu_0994 dihydrolipoamide dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Tfu_2352 glycine cleavage system H protein	K02437 gcvH; glycine cleavage system H protein
D      Tfu_1265 2-hydroxy-3-oxopropionate reductase	K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D      Tfu_1010 glycerate kinase	K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D      Tfu_0188 2-keto-3-deoxy-phosphogluconate aldolase	K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D      Tfu_0566 2-oxoglutarate dehydrogenase E1 component	K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D      Tfu_2356 formyltetrahydrofolate deformylase	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C    00640 Propanoate metabolism [PATH:tfu00640]
D      Tfu_2808 putative acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_2856 acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_1546 putative acyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_1302 probable 6-carboxyhexanoate--COA ligase	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Tfu_1473 putative pimeloyl-CoA synthetase	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Tfu_2971 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      Tfu_0180 pyruvate dehydrogenase (lipoamide)	K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D      Tfu_0181 putative branched-chain alpha keto acid dehydrogenase E1 beta subunit	K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D      Tfu_0182 putative dihydrolipoamide acyltransferase component	K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D      Tfu_0994 dihydrolipoamide dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Tfu_2239 conserved hypothetical protein	K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D      Tfu_0067 short chain enoyl-CoA hydratase / Enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0590 short chain enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_1513 biotin carboxyl carrier protein	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      Tfu_1228 putative acyl-CoA carboxylase complex A subunit	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Tfu_2557 putative acyl-CoA carboxylase, alpha subunit	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Tfu_0686 aminotransferase	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Tfu_0690 4-aminobutyrate aminotransferase	K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D      Tfu_2555 propionyl-CoA carboxylase complex B subunit	K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D      Tfu_2556 conserved hypothetical protein	K27095 accE5; acyl-CoA carboxylase epsilon subunit
D      Tfu_2395 methylmalonyl-CoA epimerase	K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D      Tfu_2762 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      Tfu_2761 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      Tfu_2577 succinyl-CoA synthetase (ADP-forming) beta subunit	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      Tfu_2576 succinyl-CoA synthetase (ADP-forming) alpha subunit	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      Tfu_0687 methylmalonate-semialdehyde dehydrogenase (acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      Tfu_2801 sn-glycerol-1-phosphate dehydrogenase	K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C    00650 Butanoate metabolism [PATH:tfu00650]
D      Tfu_0253 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0436 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2394 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1520 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2399 3-hydroxyacyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      Tfu_0067 short chain enoyl-CoA hydratase / Enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0590 short chain enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_2452 succinate dehydrogenase subunit A	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      Tfu_2451 succinate dehydrogenase subunit B	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      Tfu_2453 succinate dehydrogenase subunit C	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      Tfu_0686 aminotransferase	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Tfu_0690 4-aminobutyrate aminotransferase	K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D      Tfu_2949 succinate semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      Tfu_2590 aldehyde dehydrogenase (NAD+)	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      Tfu_2674 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      Tfu_2675 putative oxidoreductase	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      Tfu_2245 acetoacetyl-CoA synthase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      Tfu_0081 3-hydroxybutyrate dehydrogenase	K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D      Tfu_0611 acetolactate synthase, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Tfu_0612 acetolactate synthase, small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C    00660 C5-Branched dibasic acid metabolism [PATH:tfu00660]
D      Tfu_0611 acetolactate synthase, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Tfu_0612 acetolactate synthase, small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      Tfu_2577 succinyl-CoA synthetase (ADP-forming) beta subunit	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      Tfu_2576 succinyl-CoA synthetase (ADP-forming) alpha subunit	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      Tfu_0626 3-isopropylmalate dehydratase, large subunit	K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D      Tfu_0627 3-isopropylmalate dehydratase, small subunit	K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D      Tfu_0615 3-isopropylmalate dehydrogenase	K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C    00562 Inositol phosphate metabolism [PATH:tfu00562]
D      Tfu_1943 inositol-1(or 4)-monophosphatase	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D      Tfu_1212 archaeal fructose-1 6-bisphosphatase and related enzymes of inositol monophosphatase family	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D      Tfu_3099 myo-inositol-1-phosphate synthase	K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D      Tfu_0687 methylmalonate-semialdehyde dehydrogenase (acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      Tfu_2015 triosephosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B  09102 Energy metabolism
C    00190 Oxidative phosphorylation [PATH:tfu00190]
D      Tfu_2695 putative NADH dehydrogenase chain A	K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D      Tfu_2694 NADH dehydrogenase (ubiquinone), 20 kDa subunit	K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D      Tfu_2693 NADH (or F420H2) dehydrogenase, subunit C	K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D      Tfu_2692 NADH dehydrogenase I, D subunit	K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D      Tfu_2691 NADH dehydrogenase (ubiquinone), 24 kDa subunit	K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D      Tfu_2690 NADH-quinone oxidoreductase, F subunit	K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D      Tfu_2689 NADH-quinone oxidoreductase, chain G	K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D      Tfu_2688 putative NADH dehydrogenase chain F	K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D      Tfu_2687 NADH-quinone oxidoreductase, chain I	K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D      Tfu_2686 NADH dehydrogenase I chain J	K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D      Tfu_2685 NADH dehydrogenase I chain K	K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D      Tfu_2684 NADH-plastoquinone oxidoreductase, chain 5	K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D      Tfu_2683 proton-translocating NADH-quinone oxidoreductase, chain M	K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D      Tfu_2682 proton-translocating NADH-quinone oxidoreductase, chain N	K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D      Tfu_0950 NADH dehydrogenase	K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D      Tfu_0432 NADH dehydrogenase	K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D      Tfu_2452 succinate dehydrogenase subunit A	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      Tfu_2451 succinate dehydrogenase subunit B	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      Tfu_2453 succinate dehydrogenase subunit C	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      Tfu_1020 ubiquinol-cytochrome c reductase iron-sulfur subunit	K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D      Tfu_1019 ubiquinol-cytochrome c reductase, cytochrome b subunit	K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D      Tfu_1021 ubiquinol-cytochrome c reductase cytochrome c subunit	K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D      Tfu_2001 protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      Tfu_1017 possible conserved integral membrane protein	K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D      Tfu_1022 cytochrome c oxidase subunit III	K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D      Tfu_1695 cytochrome-c oxidase	K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D      Tfu_1016 cytochrome-c oxidase	K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D      Tfu_0881 cytochrome-c oxidase	K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D      Tfu_1015 cytochrome c oxidase subunit II	K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D      Tfu_1995 putative integral membrane transport protein	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      Tfu_0638 putative cytochrome oxidase subunit I	K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D      Tfu_0766 highly similar to cytochrome D ubiquinol oxidase subunit I	K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D      Tfu_0637 cytochrome bd ubiquinol oxidase, subunit II	K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D      Tfu_0765 putative cytochrome D ubiquinol oxidase subunit II	K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D      Tfu_2409 ATP synthase F1, alpha subunit	K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D      Tfu_2407 ATP synthase F1, beta subunit	K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D      Tfu_2408 H+-transporting two-sector ATPase, gamma subunit	K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D      Tfu_2410 H+-transporting two-sector ATPase, delta (OSCP) subunit	K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D      Tfu_2406 H+-transporting two-sector ATPase, delta/epsilon subunit	K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D      Tfu_2413 H+-transporting two-sector ATPase, A subunit	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      Tfu_2411 ATP synthase F0, subunit B	K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D      Tfu_2412 ATP synthase F0, C subunit	K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D      Tfu_2902 inorganic diphosphatase	K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D      Tfu_0323 polyphosphate kinase	K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C    00195 Photosynthesis
C    00196 Photosynthesis - antenna proteins
C    00710 Carbon fixation by Calvin cycle [PATH:tfu00710]
D      Tfu_2016 phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      Tfu_2017 glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      Tfu_3010 fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      Tfu_0464 GlpX	K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D      Tfu_2002 transketolase	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      Tfu_2202 ribose/galactose isomerase:Ribose 5-phosphate isomerase, actinobacteria	K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D      Tfu_2015 triosephosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      Tfu_1077 ribulose-5-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D      Tfu_2003 transaldolase	K00616 TALDO1; transaldolase [EC:2.2.1.2]
D      Tfu_2554 Phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      Tfu_0863 pyruvate phosphate dikinase	K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D      Tfu_0092 malate dehydrogenase (NAD)	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C    00720 Other carbon fixation pathways [PATH:tfu00720]
D      Tfu_0863 pyruvate phosphate dikinase	K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D      Tfu_2554 Phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      Tfu_0092 malate dehydrogenase (NAD)	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      Tfu_0459 fumarase	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      Tfu_2452 succinate dehydrogenase subunit A	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      Tfu_2451 succinate dehydrogenase subunit B	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      Tfu_2453 succinate dehydrogenase subunit C	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      Tfu_2576 succinyl-CoA synthetase (ADP-forming) alpha subunit	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      Tfu_2577 succinyl-CoA synthetase (ADP-forming) beta subunit	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      Tfu_0253 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0436 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2394 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1520 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2674 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      Tfu_2675 putative oxidoreductase	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      Tfu_2568 isocitrate dehydrogenase (NADP)	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      Tfu_1925 aconitase	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      Tfu_1513 biotin carboxyl carrier protein	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      Tfu_2395 methylmalonyl-CoA epimerase	K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D      Tfu_2762 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      Tfu_2761 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      Tfu_2571 Methenyltetrahydrofolate cyclohydrolase	K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D      Tfu_1050 5,10-methylenetetrahydrofolate reductase	K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D      Tfu_2971 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      Tfu_2808 putative acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_2856 acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_1546 putative acyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C    00680 Methane metabolism [PATH:tfu00680]
D      Tfu_3025 putative alcohol dehydrogenase	K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D      Tfu_1270 alcohol dehydrogenase class III	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      Tfu_1775 putative alcohol dehydrogenase (zinc-binding)	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      Tfu_2353 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      Tfu_0428 enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Tfu_2554 Phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      Tfu_0092 malate dehydrogenase (NAD)	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      Tfu_3010 fructose-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      Tfu_0464 GlpX	K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D      Tfu_1037 pyrophosphate-dependent phosphofructokinase	K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D      Tfu_2971 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      Tfu_2808 putative acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_2856 acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_1546 putative acyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_2911 phosphoglycerate mutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      Tfu_0614 D-3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Tfu_0246 phosphoserine aminotransferase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      Tfu_0136 phosphoserine phosphatase	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D      Tfu_2519 FO synthase subunit 1 / FO synthase subunit 2	K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32]
D      Tfu_0629 conserved hypothetical protein	K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D      Tfu_2517 LPPG:FO 2-phospho-L-lactate transferase	K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D      Tfu_2518 coenzyme F420-0 gamma-glutamyl ligase	K24998 fbiB; dehydro coenzyme F420 reductase / coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:1.3.8.17 6.3.2.31 6.3.2.34]
C    00910 Nitrogen metabolism [PATH:tfu00910]
D      Tfu_2794 conserved membrane protein	K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D      Tfu_2481 glutamate dehydrogenase (NAD)	K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D      Tfu_1371 glutamate dehydrogenase (NADP)	K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D      Tfu_0982 L-glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Tfu_0988 L-glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Tfu_1173 glutamate synthase (NADH) large subunit	K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D      Tfu_1174 glutamate synthase (NADH) small subunit	K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D      Tfu_2132 carbonic anhydrase, putative	K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C    00920 Sulfur metabolism [PATH:tfu00920]
D      Tfu_1504 extracellular solute-binding protein, family 3	K15551 tauA; taurine transport system substrate-binding protein
D      Tfu_1503 taurine ABC transporter, permease protein	K15552 tauC; taurine transport system permease protein
D      Tfu_1505 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component	K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D      Tfu_1304 similar to ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components	K15553 ssuA; sulfonate transport system substrate-binding protein
D      Tfu_1306 ABC transporter, permease component	K15554 ssuC; sulfonate transport system permease protein
D      Tfu_1305 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      Tfu_1500 alkanesulfonate monooxygenase	K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D      Tfu_1502 alkanesulfonate monooxygenase	K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D      Tfu_1931 conserved hypothetical protein	K00299 ssuE; FMN reductase [EC:1.5.1.38]
D      Tfu_1499 conserved hypothetical protein	K00299 ssuE; FMN reductase [EC:1.5.1.38]
D      Tfu_2472 similar to flavoprotein	K00299 ssuE; FMN reductase [EC:1.5.1.38]
D      Tfu_1328 conserved hypothetical protein	K00299 ssuE; FMN reductase [EC:1.5.1.38]
D      Tfu_0420 sulfate adenylyltransferase subunit 1	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      Tfu_0419 sulfate adenylyltransferase subunit 2	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      Tfu_0425 adenylylsulfate kinase	K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D      Tfu_0418 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase	K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D      Tfu_1889 phosphoadenylylsulfate reductase (thioredoxin)	K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D      Tfu_1888 putative nitrite/sulphite reductase	K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D      Tfu_0149 putative integral membrane protein	K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D      Tfu_0354 3-mercaptopyruvate sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      Tfu_2719 thiosulfate sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      Tfu_2822 homoserine O-acetyltransferase	K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D      Tfu_0440 cystathionine gamma-lyase	K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D      Tfu_1497 alkanesulfonate monooxygenase	K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35]
B
B  09103 Lipid metabolism
C    00061 Fatty acid biosynthesis [PATH:tfu00061]
D      Tfu_1513 biotin carboxyl carrier protein	K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D      Tfu_1228 putative acyl-CoA carboxylase complex A subunit	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Tfu_2557 putative acyl-CoA carboxylase, alpha subunit	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Tfu_1975 acyl carrier protein	K02078 acpP; acyl carrier protein
D      Tfu_1973 (Acyl-carrier protein) S-malonyltransferase	K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D      Tfu_1974 3-oxoacyl-[acyl-carrier-protein] synthase III	K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D      Tfu_1229 putative 3-oxoacyl-ACP synthase III	K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D      Tfu_1976 3-oxoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      Tfu_2308 putative 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Tfu_1843 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Tfu_1998 putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_1031 long-chain fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_2158 putative long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_1733 putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C    00062 Fatty acid elongation
C    00071 Fatty acid degradation [PATH:tfu00071]
D      Tfu_0253 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0436 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2394 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1520 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1278 thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      Tfu_1903 thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      Tfu_0067 short chain enoyl-CoA hydratase / Enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0590 short chain enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_2239 conserved hypothetical protein	K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D      Tfu_1999 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      Tfu_1282 putative acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      Tfu_2485 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      Tfu_1284 putative acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      Tfu_1512 putative acyl-CoA dehydrogenase	K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D      Tfu_1068 glutaryl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      Tfu_1998 putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_1031 long-chain fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_2158 putative long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_1733 putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_1273 putative oxidoreductase	K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D      Tfu_1270 alcohol dehydrogenase class III	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      Tfu_1775 putative alcohol dehydrogenase (zinc-binding)	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      Tfu_2771 putative dehydrogenase	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      Tfu_1489 oxidoreductase	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00073 Cutin, suberine and wax biosynthesis
C    00100 Steroid biosynthesis
C    00120 Primary bile acid biosynthesis
C    00121 Secondary bile acid biosynthesis
C    00140 Steroid hormone biosynthesis
C    00561 Glycerolipid metabolism [PATH:tfu00561]
D      Tfu_1010 glycerate kinase	K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_2801 sn-glycerol-1-phosphate dehydrogenase	K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D      Tfu_0787 glycerol kinase	K00864 glpK; glycerol kinase [EC:2.7.1.30]
D      Tfu_2038 HAD-superfamily hydrolase, subfamily IIA	K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D      Tfu_0271 phosphate:acyl-[acyl carrier protein] acyltransferase	K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D      Tfu_1036 phospholipid/glycerol acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      Tfu_1417 phospholipid/glycerol acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      Tfu_1766 Conserved hypothetical protein 147	K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D      Tfu_2257 glucosyltransferase	K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C    00564 Glycerophospholipid metabolism [PATH:tfu00564]
D      Tfu_0631 glycerol-3-phosphate dehydrogenase (NAD(P)+)	K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D      Tfu_2593 glycerol-3-phosphate dehydrogenase	K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D      Tfu_1036 phospholipid/glycerol acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      Tfu_1417 phospholipid/glycerol acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      Tfu_1766 Conserved hypothetical protein 147	K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D      Tfu_0245 glycerophosphoryl diester phosphodiesterase	K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D      Tfu_1757 putative glycerophosphoryl diester phosphodiesterase	K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D      Tfu_2540 glycerophosphoryl diester phosphodiesterase, putative	K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D      Tfu_0154 similar to Phospholipid N-methyltransferase	K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D      Tfu_0680 phosphatidate cytidylyltransferase	K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D      Tfu_1895 putative phosphatidylserine synthase	K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D      Tfu_1894 Phosphatidylserine decarboxylase-related protein	K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D      Tfu_2103 putative membrane transferase	K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D      Tfu_0796 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D      Tfu_2817 phospholipase D/Transphosphatidylase	K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D      Tfu_1393 CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase	K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D      Tfu_2533 putative glycerol 1-phosphate dehydrogenase	K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C    00565 Ether lipid metabolism
C    00600 Sphingolipid metabolism
C    00590 Arachidonic acid metabolism
C    00591 Linoleic acid metabolism
C    00592 alpha-Linolenic acid metabolism [PATH:tfu00592]
D      Tfu_2239 conserved hypothetical protein	K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D      Tfu_1278 thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      Tfu_1903 thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    01040 Biosynthesis of unsaturated fatty acids [PATH:tfu01040]
D      Tfu_0413 Delta-9 acyl-phospholipid desaturase	K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D      Tfu_2239 conserved hypothetical protein	K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D      Tfu_0531 acyl-CoA thioesterase	K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B  09104 Nucleotide metabolism
C    00230 Purine metabolism [PATH:tfu00230]
D      Tfu_0415 ribose-phosphate pyrophosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      Tfu_2747 amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D      Tfu_3013 phosphoribosylamine--glycine ligase	K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D      Tfu_2573 phosphoribosylglycinamide formyltransferase	K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D      Tfu_0158 phosphoribosylformylglycinamidine synthase subunit II	K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D      Tfu_0178 phosphoribosylformylglycinamidine synthetase PurS	K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D      Tfu_0156 phosphoribosylformylglycinamidine synthase subunit I	K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D      Tfu_2748 phosphoribosylformylglycinamidine cyclo-ligase	K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D      Tfu_2547 phosphoribosylaminoimidazole carboxylase	K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D      Tfu_2546 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase	K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D      Tfu_3015 phosphoribosylaminoimidazole-succinocarboxamide synthase	K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D      Tfu_3014 Adenylosuccinate lyase	K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D      Tfu_2572 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase	K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D      Tfu_2091 adenine phosphoribosyltransferase	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      Tfu_1760 HAD-superfamily hydrolase, subfamily IIA	K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D      Tfu_2242 inosine guanosine and xanthosine phosphorylase	K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D      Tfu_1114 Protein of unknown function DUF152	K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D      Tfu_2896 hypoxanthine phosphoribosyltransferase	K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D      Tfu_2595 IMP dehydrogenase related 2	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      Tfu_2596 inosine-5'-monophosphate dehydrogenase	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      Tfu_2188 nucleoside diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      Tfu_2364 Ham1-like protein	K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D      Tfu_2589 GMP synthase (glutamine-hydrolyzing)	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      Tfu_2440 IMP dehydrogenase related 1	K26110 guaB1; GMP reductase [EC:1.7.1.7]
D      Tfu_1062 guanylate kinase	K00942 gmk; guanylate kinase [EC:2.7.4.8]
D      Tfu_2149 ribonucleotide reductase large subunit	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      Tfu_3001 ribonucleoside-diphosphate reductase	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      Tfu_3002 ribonucleoside-diphosphate reductase	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D      Tfu_0865 deoxyguanosinetriphosphate triphosphohydrolase	K01129 dgt; dGTPase [EC:3.1.5.1]
D      Tfu_2090 RelA/SpoT protein	K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D      Tfu_0431 Ppx/GppA phosphatase	K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D      Tfu_2552 adenylate cyclase	K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D      Tfu_3012 Adenylosuccinate synthetase	K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D      Tfu_1012 putative carbohydrate kinase	K00856 ADK; adenosine kinase [EC:2.7.1.20]
D      Tfu_2563 adenosine deaminase	K01488 add; adenosine deaminase [EC:3.5.4.4]
D      Tfu_2662 adenosine deaminase	K01488 add; adenosine deaminase [EC:3.5.4.4]
D      Tfu_2625 Adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      Tfu_2105 conserved hypothetical protein	K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D      Tfu_0420 sulfate adenylyltransferase subunit 1	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      Tfu_0419 sulfate adenylyltransferase subunit 2	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      Tfu_0425 adenylylsulfate kinase	K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D      Tfu_0962 dihydroorotase	K01466 allB; allantoinase [EC:3.5.2.5]
C    00240 Pyrimidine metabolism [PATH:tfu00240]
D      Tfu_1057 carbamoyl-phosphate synthase large subunit	K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D      Tfu_1056 carbamoyl-phosphate synthase small subunit	K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D      Tfu_1054 aspartate carbamoyltransferase	K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D      Tfu_1055 dihydroorotase	K01465 URA4; dihydroorotase [EC:3.5.2.3]
D      Tfu_1059 dihydroorotate oxidase B, catalytic subunit	K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D      Tfu_1058 dihydroorotate oxidase B, electron transfer subunit	K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D      Tfu_0927 dihydroorotate oxidase A	K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D      Tfu_3008 orotate phosphoribosyltransferase	K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D      Tfu_1060 orotidine-5'-phosphate decarboxylase	K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D      Tfu_0678 uridylate kinase	K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D      Tfu_2188 nucleoside diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      Tfu_1199 CTP synthase	K01937 pyrG; CTP synthase [EC:6.3.4.2]
D      Tfu_1209 cytidylate kinase	K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D      Tfu_1760 HAD-superfamily hydrolase, subfamily IIA	K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D      Tfu_1053 uracil phosphoribosyltransferase	K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D      Tfu_2932 dCTP deaminase	K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D      Tfu_2149 ribonucleotide reductase large subunit	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      Tfu_3001 ribonucleoside-diphosphate reductase	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      Tfu_3002 ribonucleoside-diphosphate reductase	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D      Tfu_2783 thymidylate kinase	K00943 tmk; dTMP kinase [EC:2.7.4.9]
D      Tfu_1935 deoxyuridine 5'-triphosphate nucleotidohydrolase	K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D      Tfu_1387 thymidylate synthase complementing protein ThyX	K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D      Tfu_2012 amidase, hydantoinase/carbamoylase	K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D      Tfu_2530 similar to Nitroreductase	K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B  09105 Amino acid metabolism
C    00250 Alanine, aspartate and glutamate metabolism [PATH:tfu00250]
D      Tfu_2253 aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2661 L-aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_1145 asparagine synthase (glutamine-hydrolysing)	K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D      Tfu_0961 L-alanine dehydrogenase	K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D      Tfu_2052 argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      Tfu_2051 argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      Tfu_3012 Adenylosuccinate synthetase	K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D      Tfu_3014 Adenylosuccinate lyase	K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D      Tfu_1054 aspartate carbamoyltransferase	K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D      Tfu_0686 aminotransferase	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Tfu_0690 4-aminobutyrate aminotransferase	K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D      Tfu_2949 succinate semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      Tfu_2590 aldehyde dehydrogenase (NAD+)	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      Tfu_1173 glutamate synthase (NADH) large subunit	K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D      Tfu_1174 glutamate synthase (NADH) small subunit	K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D      Tfu_2481 glutamate dehydrogenase (NAD)	K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D      Tfu_1371 glutamate dehydrogenase (NADP)	K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D      Tfu_0433 delta-1-pyrroline-5-carboxylate dehydrogenase 1	K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D      Tfu_0982 L-glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Tfu_0988 L-glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Tfu_1057 carbamoyl-phosphate synthase large subunit	K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D      Tfu_1056 carbamoyl-phosphate synthase small subunit	K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D      Tfu_0156 phosphoribosylformylglycinamidine synthase subunit I	K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D      Tfu_2611 glutamine--fructose-6-phosphate transaminase	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      Tfu_2747 amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C    00260 Glycine, serine and threonine metabolism [PATH:tfu00260]
D      Tfu_0043 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      Tfu_0042 aspartate semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      Tfu_2424 homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      Tfu_2422 homoserine kinase	K00872 thrB; homoserine kinase [EC:2.7.1.39]
D      Tfu_2423 L-threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      Tfu_0226 L-threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      Tfu_2353 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      Tfu_1010 glycerate kinase	K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D      Tfu_2911 phosphoglycerate mutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      Tfu_0614 D-3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Tfu_0246 phosphoserine aminotransferase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      Tfu_0136 phosphoserine phosphatase	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D      Tfu_1398 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit	K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D      Tfu_2351 aminomethyltransferase	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      Tfu_0994 dihydrolipoamide dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Tfu_2352 glycine cleavage system H protein	K02437 gcvH; glycine cleavage system H protein
D      Tfu_1895 putative phosphatidylserine synthase	K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D      Tfu_0279 betaine-aldehyde dehydrogenase	K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D      Tfu_0438 cystathionine beta-synthase	K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D      Tfu_1741 L-threonine ammonia-lyase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      Tfu_1166 tryptophan synthase, alpha chain	K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D      Tfu_1165 tryptophan synthase, beta chain	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      Tfu_0301 aminotransferase	K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D      Tfu_0300 putative acetyltransferase	K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D      Tfu_0302 putative condensing enzyme	K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C    00270 Cysteine and methionine metabolism [PATH:tfu00270]
D      Tfu_0438 cystathionine beta-synthase	K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D      Tfu_1825 methionine synthase (B12-dependent)	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      Tfu_1065 methionine adenosyltransferase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D      Tfu_2234 putative spermidine synthase	K00797 speE; spermidine synthase [EC:2.5.1.16]
D      Tfu_1114 Protein of unknown function DUF152	K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D      Tfu_2505 adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      Tfu_0043 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      Tfu_0042 aspartate semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      Tfu_2424 homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      Tfu_2822 homoserine O-acetyltransferase	K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D      Tfu_0440 cystathionine gamma-lyase	K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D      Tfu_2823 o-acetylhomoserine/O-acetylserine sulfhydrylase	K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D      Tfu_0616 branched chain amino acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Tfu_2112 putative aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Tfu_2253 aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2661 L-aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_0354 3-mercaptopyruvate sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      Tfu_2719 thiosulfate sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      Tfu_0092 malate dehydrogenase (NAD)	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      Tfu_0614 D-3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Tfu_0246 phosphoserine aminotransferase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C    00280 Valine, leucine and isoleucine degradation [PATH:tfu00280]
D      Tfu_0616 branched chain amino acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Tfu_2112 putative aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Tfu_0180 pyruvate dehydrogenase (lipoamide)	K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D      Tfu_0181 putative branched-chain alpha keto acid dehydrogenase E1 beta subunit	K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D      Tfu_0182 putative dihydrolipoamide acyltransferase component	K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D      Tfu_0994 dihydrolipoamide dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Tfu_1999 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      Tfu_1282 putative acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      Tfu_2485 acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      Tfu_1284 putative acyl-CoA dehydrogenase	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      Tfu_0946 butyryl-CoA dehydrogenase	K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D      Tfu_0067 short chain enoyl-CoA hydratase / Enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0590 short chain enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_1278 thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      Tfu_1903 thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      Tfu_1228 putative acyl-CoA carboxylase complex A subunit	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Tfu_2557 putative acyl-CoA carboxylase, alpha subunit	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Tfu_2555 propionyl-CoA carboxylase complex B subunit	K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D      Tfu_2556 conserved hypothetical protein	K27095 accE5; acyl-CoA carboxylase epsilon subunit
D      Tfu_2395 methylmalonyl-CoA epimerase	K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D      Tfu_2762 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      Tfu_2761 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      Tfu_0687 methylmalonate-semialdehyde dehydrogenase (acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_0690 4-aminobutyrate aminotransferase	K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D      Tfu_0947 putative acetyl/propionyl CoA carboxylase alpha subunit: biotin carboxylase	K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D      Tfu_0948 propionyl-CoA carboxylase	K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D      Tfu_2245 acetoacetyl-CoA synthase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      Tfu_0253 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0436 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2394 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1520 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C    00290 Valine, leucine and isoleucine biosynthesis [PATH:tfu00290]
D      Tfu_1741 L-threonine ammonia-lyase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      Tfu_0626 3-isopropylmalate dehydratase, large subunit	K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D      Tfu_0627 3-isopropylmalate dehydratase, small subunit	K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D      Tfu_0615 3-isopropylmalate dehydrogenase	K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D      Tfu_0611 acetolactate synthase, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Tfu_0612 acetolactate synthase, small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      Tfu_0613 ketol-acid reductoisomerase	K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D      Tfu_2209 dihydroxyacid dehydratase	K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D      Tfu_0616 branched chain amino acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Tfu_2112 putative aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Tfu_0850 yeast 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D      Tfu_0617 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C    00300 Lysine biosynthesis [PATH:tfu00300]
D      Tfu_2424 homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      Tfu_0043 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      Tfu_0042 aspartate semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      Tfu_0791 dihydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      Tfu_1715 dihydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      Tfu_0786 dihydrodipicolinate reductase	K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D      Tfu_0494 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D      Tfu_2054 acetylornithine aminotransferase	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      Tfu_0568 succinyldiaminopimelate aminotransferase	K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D      Tfu_0495 succinyl-diaminopimelate desuccinylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      Tfu_0816 diaminopimelate epimerase	K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D      Tfu_2425 diaminopimelate decarboxylase	K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D      Tfu_1641 valine-pyruvate aminotransferase	K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D      Tfu_1105 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase	K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D      Tfu_1106 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C    00310 Lysine degradation [PATH:tfu00310]
D      Tfu_0994 dihydrolipoamide dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Tfu_1068 glutaryl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      Tfu_0067 short chain enoyl-CoA hydratase / Enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0590 short chain enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0253 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0436 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2394 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1520 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0690 4-aminobutyrate aminotransferase	K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D      Tfu_2949 succinate semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      Tfu_2590 aldehyde dehydrogenase (NAD+)	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      Tfu_1660 similar to dehydrogenase	K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00220 Arginine biosynthesis [PATH:tfu00220]
D      Tfu_1992 ornithine carbamoyltransferase	K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D      Tfu_2052 argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      Tfu_2051 argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      Tfu_1543 arginase	K01476 rocF; arginase [EC:3.5.3.1]
D      Tfu_1993 arginine deiminase	K01478 arcA; arginine deiminase [EC:3.5.3.6]
D      Tfu_0156 phosphoribosylformylglycinamidine synthase subunit I	K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D      Tfu_0982 L-glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Tfu_0988 L-glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Tfu_1057 carbamoyl-phosphate synthase large subunit	K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D      Tfu_1056 carbamoyl-phosphate synthase small subunit	K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D      Tfu_2481 glutamate dehydrogenase (NAD)	K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D      Tfu_1371 glutamate dehydrogenase (NADP)	K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D      Tfu_2253 aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2661 L-aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2879 N-acetylglutamate synthase	K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D      Tfu_2056 glutamate N-acetyltransferase	K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D      Tfu_2055 N-acetylglutamate kinase	K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D      Tfu_2057 N-acetyl-gamma-glutamyl-phosphate reductase	K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D      Tfu_2054 acetylornithine aminotransferase	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C    00330 Arginine and proline metabolism [PATH:tfu00330]
D      Tfu_2234 putative spermidine synthase	K00797 speE; spermidine synthase [EC:2.5.1.16]
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_0058 agmatinase	K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10]
D      Tfu_2207 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Tfu_1572 conserved hypothetical protein	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Tfu_1543 arginase	K01476 rocF; arginase [EC:3.5.3.1]
D      Tfu_2247 aminotransferase	K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D      Tfu_2708 pyrroline-5-carboxylate reductase	K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D      Tfu_0434 L-proline dehydrogenase	K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D      Tfu_0433 delta-1-pyrroline-5-carboxylate dehydrogenase 1	K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D      Tfu_2179 glutamate 5-kinase	K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D      Tfu_2175 glutamate-5-semialdehyde dehydrogenase	K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D      Tfu_2349 prolyl aminopeptidase. Serine peptidase. MEROPS family S33	K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D      Tfu_2253 aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2661 L-aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C    00340 Histidine metabolism [PATH:tfu00340]
D      Tfu_0174 ATP phosphoribosyltransferase (homohexameric)	K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D      Tfu_0175 phosphoribosyl-ATP pyrophosphatase	K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D      Tfu_1159 phosphoribosyl-AMP cyclohydrolase	K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D      Tfu_1155 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D      Tfu_1154 imidazole glycerol phosphate synthase subunit hisH	K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D      Tfu_1156 imidazole glycerol phosphate synthase subunit hisF	K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D      Tfu_1152 imidazoleglycerol-phosphate dehydratase	K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D      Tfu_2223 L-threonine O-3-phosphate decarboxylase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_3018 aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_1151 histidinol phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_0542 histidinol-phosphate phosphatase	K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D      Tfu_1150 histidinol dehydrogenase	K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D      Tfu_0821 imidazolonepropionase	K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00350 Tyrosine metabolism [PATH:tfu00350]
D      Tfu_2253 aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2661 L-aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2223 L-threonine O-3-phosphate decarboxylase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_3018 aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_1151 histidinol phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_1270 alcohol dehydrogenase class III	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      Tfu_1775 putative alcohol dehydrogenase (zinc-binding)	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      Tfu_2771 putative dehydrogenase	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      Tfu_1489 oxidoreductase	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      Tfu_2949 succinate semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      Tfu_2590 aldehyde dehydrogenase (NAD+)	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C    00360 Phenylalanine metabolism [PATH:tfu00360]
D      Tfu_0501 Enoyl-CoA hydratase	K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D      Tfu_1259 Enoyl-CoA hydratase	K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D      Tfu_0067 short chain enoyl-CoA hydratase / Enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0590 short chain enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_2399 3-hydroxyacyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      Tfu_2253 aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2661 L-aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2223 L-threonine O-3-phosphate decarboxylase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_3018 aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_1151 histidinol phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_2797 d-amino-acid dehydrogenase	K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D      Tfu_2207 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Tfu_1572 conserved hypothetical protein	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Tfu_1985 putative dioxygenase	K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D      Tfu_1273 putative oxidoreductase	K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C    00380 Tryptophan metabolism [PATH:tfu00380]
D      Tfu_0921 Tryptophan 2,3-dioxygenase	K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D      Tfu_0922 Kynureninase	K01556 KYNU; kynureninase [EC:3.7.1.3]
D      Tfu_0994 dihydrolipoamide dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Tfu_1068 glutaryl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      Tfu_0067 short chain enoyl-CoA hydratase / Enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0590 short chain enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0253 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0436 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2394 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1520 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_2207 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Tfu_1572 conserved hypothetical protein	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Tfu_1649 catalase	K03781 katE; catalase [EC:1.11.1.6]
C    00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tfu00400]
D      Tfu_2350 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      Tfu_1039 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase	K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      Tfu_1092 3-dehydroquinate synthase	K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D      Tfu_1635 3-dehydroquinate dehydratase	K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D      Tfu_1091 shikimate kinase	K00891 aroK; shikimate kinase [EC:2.7.1.71]
D      Tfu_0544 3-phosphoshikimate 1-carboxyvinyltransferase	K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D      Tfu_1090 chorismate synthase	K01736 aroC; chorismate synthase [EC:4.2.3.5]
D      Tfu_1386 anthranilate synthase, component II	K13503 trpEG; anthranilate synthase [EC:4.1.3.27]
D      Tfu_1024 anthranilate phosphoribosyltransferase	K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D      Tfu_1155 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D      Tfu_1164 indole-3-glycerol phosphate synthase	K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D      Tfu_1166 tryptophan synthase, alpha chain	K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D      Tfu_1165 tryptophan synthase, beta chain	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      Tfu_1207 chorismate mutase	K06208 aroH; chorismate mutase [EC:5.4.99.5]
D      Tfu_1208 prephenate dehydrogenase	K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D      Tfu_3053 prephenate dehydratase	K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D      Tfu_2253 aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2661 L-aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2223 L-threonine O-3-phosphate decarboxylase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_3018 aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_1151 histidinol phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B  09106 Metabolism of other amino acids
C    00410 beta-Alanine metabolism [PATH:tfu00410]
D      Tfu_1862 L-aspartate 1-decarboxylase	K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D      Tfu_0686 aminotransferase	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Tfu_0690 4-aminobutyrate aminotransferase	K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_2884 pantothenate synthetase	K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D      Tfu_2012 amidase, hydantoinase/carbamoylase	K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D      Tfu_0067 short chain enoyl-CoA hydratase / Enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0590 short chain enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_2239 conserved hypothetical protein	K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D      Tfu_0687 methylmalonate-semialdehyde dehydrogenase (acylating)	K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C    00430 Taurine and hypotaurine metabolism [PATH:tfu00430]
D      Tfu_0961 L-alanine dehydrogenase	K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D      Tfu_2481 glutamate dehydrogenase (NAD)	K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D      Tfu_2971 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
C    00440 Phosphonate and phosphinate metabolism
C    00450 Selenocompound metabolism [PATH:tfu00450]
D      Tfu_0440 cystathionine gamma-lyase	K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D      Tfu_1825 methionine synthase (B12-dependent)	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      Tfu_1983 cysteine desulfurase	K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D      Tfu_3108 thioredoxin reductase	K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D      Tfu_0420 sulfate adenylyltransferase subunit 1	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      Tfu_0419 sulfate adenylyltransferase subunit 2	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      Tfu_0425 adenylylsulfate kinase	K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D      Tfu_0389 methionyl-tRNA synthetase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C    00460 Cyanoamino acid metabolism [PATH:tfu00460]
D      Tfu_1607 exo-1,4-beta-glucosidase	K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D      Tfu_1629 beta-glucosidase	K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D      Tfu_0937 beta-glucosidase. Glycosyl Hydrolase family 1	K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D      Tfu_2353 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C    00470 D-Amino acid metabolism [PATH:tfu00470]
D      Tfu_2606 alanine racemase	K01775 alr; alanine racemase [EC:5.1.1.1]
D      Tfu_0633 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      Tfu_1640 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      Tfu_0156 phosphoribosylformylglycinamidine synthase subunit I	K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D      Tfu_2162 glutamate racemase	K01776 murI; glutamate racemase [EC:5.1.1.3]
D      Tfu_1108 UDP-N-acetylmuramoylalanine--D-glutamate ligase	K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D      Tfu_0816 diaminopimelate epimerase	K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D      Tfu_2425 diaminopimelate decarboxylase	K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D      Tfu_0058 agmatinase	K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10]
D      Tfu_2797 d-amino-acid dehydrogenase	K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C    00480 Glutathione metabolism [PATH:tfu00480]
D      Tfu_1970 conserved hypothetical protein	K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D      Tfu_2565 Enzymatic protein of unknown function	K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D      Tfu_0503 leucyl aminopeptidase	K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D      Tfu_0995 leucyl aminopeptidase	K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D      Tfu_2204 aminopeptidase N. Metallo peptidase. MEROPS family M01	K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D      Tfu_2568 isocitrate dehydrogenase (NADP)	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      Tfu_0003 6-phosphogluconate dehydrogenase (decarboxylating)	K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D      Tfu_2005 glucose-6-phosphate 1-dehydrogenase	K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D      Tfu_2759 similar to Glutathione peroxidase	K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D      Tfu_2234 putative spermidine synthase	K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B  09107 Glycan biosynthesis and metabolism
C    00510 N-Glycan biosynthesis
C    00513 Various types of N-glycan biosynthesis
C    00512 Mucin type O-glycan biosynthesis
C    00515 Mannose type O-glycan biosynthesis [PATH:tfu00515]
D      Tfu_0385 putative integral membrane protein	K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C    00514 Other types of O-glycan biosynthesis [PATH:tfu00514]
D      Tfu_0385 putative integral membrane protein	K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C    00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C    00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C    00533 Glycosaminoglycan biosynthesis - keratan sulfate
C    00531 Glycosaminoglycan degradation
C    00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C    00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C    00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C    00604 Glycosphingolipid biosynthesis - ganglio series
C    00511 Other glycan degradation [PATH:tfu00511]
D      Tfu_0915 beta-mannosidase. Glycosyl Hydrolase family 2. / beta-mannosidase	K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D      Tfu_1614 conserved hypothetical protein	K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C    00540 Lipopolysaccharide biosynthesis
D      Tfu_2196 cytidyltransferase-related	K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
C    00542 O-Antigen repeat unit biosynthesis [PATH:tfu00542]
D      Tfu_2416 putative teichoic acid linkage unit synthesis (synthesis of undecaprenylpyrophosphate-N-aetylglucosamine)	K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D      Tfu_2028 conserved hypothetical protein	K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C    00541 O-Antigen nucleotide sugar biosynthesis [PATH:tfu00541]
D      Tfu_0373 UDP-glucose pyrophosphorylase	K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D      Tfu_2723 putative epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Tfu_2591 UDP-galactose 4-epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Tfu_0169 nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase)	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Tfu_1622 UDP-glucose 4-epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Tfu_2544 UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      Tfu_0016 mannose-6-phosphate isomerase	K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D      Tfu_2510 phosphomannomutase	K01840 manB; phosphomannomutase [EC:5.4.2.8]
D      Tfu_0414 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase	K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D      Tfu_0010 N-acetylneuraminate synthase	K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D      Tfu_2529 putative UDP-glucose/GDP-mannose dehydrogenase	K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
C    00550 Peptidoglycan biosynthesis [PATH:tfu00550]
D      Tfu_3016 UDP-N-acetylglucosamine 1-carboxyvinyltransferase	K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D      Tfu_2664 UDP-N-acetylmuramate dehydrogenase	K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D      Tfu_1111 UDP-N-acetylmuramate--L-alanine ligase	K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D      Tfu_1108 UDP-N-acetylmuramoylalanine--D-glutamate ligase	K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D      Tfu_1105 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase	K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D      Tfu_0633 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      Tfu_1640 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      Tfu_1106 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D      Tfu_1838 Undecaprenyl-diphosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D      Tfu_1107 Phospho-N-acetylmuramoyl-pentapeptide-transferase	K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D      Tfu_1110 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D      Tfu_1104 peptidoglycan glycosyltransferase	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D      Tfu_3064 peptidoglycan glycosyltransferase	K05364 pbpA; penicillin-binding protein A
D      Tfu_2903 peptidase S13, D-Ala-D-Ala carboxypeptidase C	K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D      Tfu_0368 hypothetical protein	K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D      Tfu_2714 putative ligase	K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D      Tfu_2713 conserved hypothetical protein	K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C    00552 Teichoic acid biosynthesis [PATH:tfu00552]
D      Tfu_1838 Undecaprenyl-diphosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D      Tfu_2416 putative teichoic acid linkage unit synthesis (synthesis of undecaprenylpyrophosphate-N-aetylglucosamine)	K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D      Tfu_2028 conserved hypothetical protein	K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D      Tfu_2178 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase	K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D      Tfu_0017 cell envelope-related transcriptional attenuator	K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D      Tfu_1372 cell envelope-related transcriptional attenuator	K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D      Tfu_2173 similar to Glycosyltransferases involved in cell wall biogenesis	K22708 tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355]
D      Tfu_2257 glucosyltransferase	K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C    00571 Lipoarabinomannan (LAM) biosynthesis
C    00572 Arabinogalactan biosynthesis - Mycobacterium
C    00543 Exopolysaccharide biosynthesis [PATH:tfu00543]
D      Tfu_2416 putative teichoic acid linkage unit synthesis (synthesis of undecaprenylpyrophosphate-N-aetylglucosamine)	K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D      Tfu_2028 conserved hypothetical protein	K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D      Tfu_0166 similar to Glycosyltransferases probably involved in cell wall biogenesis	K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
B
B  09108 Metabolism of cofactors and vitamins
C    00730 Thiamine metabolism [PATH:tfu00730]
D      Tfu_2250 phosphomethylpyrimidine kinase	K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D      Tfu_0595 putative pyridoxal-phosphate-dependent aminotransferase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      Tfu_1038 thiamine biosynthesis protein	K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D      Tfu_1044 thiamine biosynthesis oxidoreductase ThiO	K03153 thiO; glycine oxidase [EC:1.4.3.19]
D      Tfu_1917 1-Deoxy-D-xylulose-5-phosphate synthase	K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D      Tfu_1042 thiamine biosynthesis ThiG	K03149 thiG; thiazole synthase [EC:2.8.1.10]
D      Tfu_1046 thiamine monophosphate synthase	K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D      Tfu_0643 thiamine-monophosphate kinase	K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D      Tfu_0543 conserved hypothetical protein	K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D      Tfu_2625 Adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      Tfu_2953 putative transcriptional regulator; RBL02063	K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C    00740 Riboflavin metabolism [PATH:tfu00740]
D      Tfu_1080 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II	K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D      Tfu_1081 6,7-dimethyl-8-ribityllumazine synthase	K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D      Tfu_1078 Lumazine-binding protein	K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D      Tfu_0782 riboflavin kinase / FMN adenylyltransferase	K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D      Tfu_1931 conserved hypothetical protein	K00299 ssuE; FMN reductase [EC:1.5.1.38]
D      Tfu_1499 conserved hypothetical protein	K00299 ssuE; FMN reductase [EC:1.5.1.38]
D      Tfu_2472 similar to flavoprotein	K00299 ssuE; FMN reductase [EC:1.5.1.38]
D      Tfu_1328 conserved hypothetical protein	K00299 ssuE; FMN reductase [EC:1.5.1.38]
C    00750 Vitamin B6 metabolism [PATH:tfu00750]
D      Tfu_0248 Pyridoxamine 5'-phosphate oxidase	K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D      Tfu_0246 phosphoserine aminotransferase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D      Tfu_2423 L-threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      Tfu_0226 L-threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      Tfu_2099 vitamin B6 biosynthesis protein	K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D      Tfu_2097 putative glutamine amidotransferase	K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C    00760 Nicotinate and nicotinamide metabolism [PATH:tfu00760]
D      Tfu_0575 quinolinate synthetase A	K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D      Tfu_2373 nicotinate phosphoribosyltransferase related	K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D      Tfu_2242 inosine guanosine and xanthosine phosphorylase	K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D      Tfu_1760 HAD-superfamily hydrolase, subfamily IIA	K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D      Tfu_2171 nicotinate-nucleotide adenylyltransferase	K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D      Tfu_0527 conserved hypothetical protein	K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D      Tfu_0983 NH(3)-dependent NAD(+) synthetase	K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D      Tfu_0797 competence/damage-inducible protein cinA	K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D      Tfu_2374 putative pyrazinamidase / nicotinamidase	K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D      Tfu_1336 putative Sir2 family regulator	K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D      Tfu_2033 NAD(+) kinase	K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D      Tfu_2949 succinate semialdehyde dehydrogenase	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      Tfu_2590 aldehyde dehydrogenase (NAD+)	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C    00770 Pantothenate and CoA biosynthesis [PATH:tfu00770]
D      Tfu_0611 acetolactate synthase, large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Tfu_0612 acetolactate synthase, small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      Tfu_0613 ketol-acid reductoisomerase	K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D      Tfu_2209 dihydroxyacid dehydratase	K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D      Tfu_0981 ketopantoate hydroxymethyltransferase	K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D      Tfu_2884 pantothenate synthetase	K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D      Tfu_2610 bacterial pantothenate kinase	K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D      Tfu_2882 pantothenate kinase	K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D      Tfu_1064 Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase	K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D      Tfu_0648 Phosphopantetheine adenylyltransferase	K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D      Tfu_1192 dephospho-CoA kinase	K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D      Tfu_1855 4'-phosphopantetheinyl transferase	K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D      Tfu_0616 branched chain amino acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Tfu_2112 putative aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Tfu_2012 amidase, hydantoinase/carbamoylase	K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D      Tfu_1862 L-aspartate 1-decarboxylase	K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00780 Biotin metabolism [PATH:tfu00780]
D      Tfu_1976 3-oxoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      Tfu_2308 putative 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Tfu_1843 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Tfu_2553 biotin--acetyl-CoA-carboxylase ligase	K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D      Tfu_0340 trimethylamine-N-oxide reductase (cytochrome c)	K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C    00785 Lipoic acid metabolism [PATH:tfu00785]
D      Tfu_0992 Lipoate-protein ligase B	K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D      Tfu_0991 lipoate synthase	K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D      Tfu_0994 dihydrolipoamide dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Tfu_3049 pyruvate dehydrogenase (lipoamide)	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      Tfu_3050 dehydrogenase complex, E1 component, beta subunit	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      Tfu_3051 pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      Tfu_0993 2-oxoglutarate dehydrogenase E2 component	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      Tfu_0566 2-oxoglutarate dehydrogenase E1 component	K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D      Tfu_0180 pyruvate dehydrogenase (lipoamide)	K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D      Tfu_0181 putative branched-chain alpha keto acid dehydrogenase E1 beta subunit	K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D      Tfu_0182 putative dihydrolipoamide acyltransferase component	K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D      Tfu_1398 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit	K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D      Tfu_2351 aminomethyltransferase	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      Tfu_2352 glycine cleavage system H protein	K02437 gcvH; glycine cleavage system H protein
C    00790 Folate biosynthesis [PATH:tfu00790]
D      Tfu_2894 GTP cyclohydrolase	K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D      Tfu_1673 phosphodiesterase/alkaline phosphatase D	K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D      Tfu_2891 dihydroneopterin aldolase family:Dihydroneopterin aldolase	K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D      Tfu_2890 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK	K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D      Tfu_2893 Dihydropteroate synthase	K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D      Tfu_1314 Dihydropteroate synthase	K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D      Tfu_2190 folylpolyglutamate synthetase	K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D      Tfu_1080 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II	K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D      Tfu_1666 aminodeoxychorismate synthase, glutamine amidotransferase subunit / aminodeoxychorismate synthase, subunit I	K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D      Tfu_1547 pterin-4-alpha-carbinolamine dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      Tfu_1348 GTP cyclohydrolase subunit MoaA	K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D      Tfu_0375 GTP cyclohydrolase subunit MoaC	K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D      Tfu_0538 molybdopterin synthase subunit MoaE	K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D      Tfu_0374 molybdopterin molybdochelatase	K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D      Tfu_2115 putative molybdopterin biosynthesis protein	K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D      Tfu_1366 molybdenum cofactor guanylyltransferase	K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C    00670 One carbon pool by folate [PATH:tfu00670]
D      Tfu_2571 Methenyltetrahydrofolate cyclohydrolase	K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D      Tfu_2353 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      Tfu_2573 phosphoribosylglycinamide formyltransferase	K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D      Tfu_2572 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase	K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D      Tfu_1075 methionyl-tRNA formyltransferase	K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D      Tfu_2351 aminomethyltransferase	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      Tfu_1825 methionine synthase (B12-dependent)	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D      Tfu_1387 thymidylate synthase complementing protein ThyX	K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D      Tfu_2356 formyltetrahydrofolate deformylase	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D      Tfu_1050 5,10-methylenetetrahydrofolate reductase	K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D      Tfu_0372 conserved hypothetical protein	K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C    00830 Retinol metabolism
C    00860 Porphyrin metabolism [PATH:tfu00860]
D      Tfu_0623 glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      Tfu_2733 glutamyl-tRNA reductase	K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D      Tfu_2726 glutamate-1-semialdehyde 2,1-aminomutase	K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D      Tfu_2730 porphobilinogen synthase	K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D      Tfu_2732 hydroxymethylbilane synthase	K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D      Tfu_1899 uroporphyrinogen decarboxylase	K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D      Tfu_0739 coproporphyrinogen III oxidase, anaerobic	K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D      Tfu_3023 similar to Flavodoxin	K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D      Tfu_1897 UDP-galactopyranose mutase	K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D      Tfu_1945 ferrochelatase	K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D      Tfu_1896 conserved hypothetical protein	K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D      Tfu_2731 uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase	K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D      Tfu_2221 uroporphyrinogen-III C-methyltransferase	K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D      Tfu_2001 protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      Tfu_1995 putative integral membrane transport protein	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      Tfu_0316 precorrin-2 C20-methyltransferase / precorrin-3 methyltransferase	K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
D      Tfu_0318 cobalamin biosynthesis protein CobG, precorrin-3B synthase	K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D      Tfu_0315 precorrin-4 C11-methyltransferase	K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D      Tfu_0320 precorrin-6A synthase (deacetylating)	K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D      Tfu_0310 precorrin-6A reductase	K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D      Tfu_0314 precorrin-6Y C5,15-methyltransferase (decarboxylating)	K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D      Tfu_0317 precorrin-8X methylmutase	K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D      Tfu_0311 cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)	K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D      Tfu_0319 hydrogenobyrinic acid a,c-diamide cobaltochelatase	K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D      Tfu_2404 ATP:cob(I)alamin adenosyltransferase	K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      Tfu_0312 cob(I)yrinic acid a,c-diamide adenosyltransferase	K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      Tfu_0309 adenosylcobyric acid synthase (glutamine-hydrolysing)	K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D      Tfu_2224 adenosylcobinamide-phosphate synthase	K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D      Tfu_0997 adenosylcobinamide kinase	K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D      Tfu_0996 cobalamin-5'-phosphate synthase	K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D      Tfu_2222 cob(II)yrinic acid a,c-diamide reductase	K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D      Tfu_1953 conserved hypothetical protein	K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D      Tfu_0313 protoporphyrin IX magnesium-chelatase	K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D      Tfu_0443 magnesium chelatase subunit ChlI	K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D      Tfu_2345 heme oxygenase (decyclizing)	K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
C    00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tfu00130]
D      Tfu_2697 demethylmenaquinone methyltransferase	K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D      Tfu_1413 isochorismate synthase	K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D      Tfu_1872 isochorismate synthase	K02361 entC; isochorismate synthase [EC:5.4.4.2]
D      Tfu_1411 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D      Tfu_1410 o-succinylbenzoate-CoA synthase	K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D      Tfu_0960 O-succinylbenzoate synthase	K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D      Tfu_1408 putative ortho-succinylbenzoate-CoA synthetase	K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D      Tfu_1409 1,4-Dihydroxy-2-naphthoate synthase	K01661 menB; naphthoate synthase [EC:4.1.3.36]
D      Tfu_0788 1,4-Dihydroxy-2-naphtoate prenyltransferase	K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D      Tfu_1047 conserved hypothetical protein	K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B  09109 Metabolism of terpenoids and polyketides
C    00900 Terpenoid backbone biosynthesis [PATH:tfu00900]
D      Tfu_1917 1-Deoxy-D-xylulose-5-phosphate synthase	K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D      Tfu_0747 1-deoxy-D-xylulose 5-phosphate reductoisomerase	K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D      Tfu_2539 4-diphosphocytidyl-2C-methyl-D-erythritol synthase	K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D      Tfu_0407 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D      Tfu_2906 MECDP-synthase	K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D      Tfu_0749 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D      Tfu_0471 4-hydroxy-3-methylbut-2-enyl diphosphate reductase	K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D      Tfu_0253 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0436 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2394 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1520 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1051 putative polyprenyl synthase / dimethylallyltranstransferase	K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D      Tfu_0456 Undecaprenyl pyrophosphate synthetase	K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D      Tfu_0853 Undecaprenyl pyrophosphate synthetase	K21273 E2.5.1.88; trans,polycis-polyprenyl diphosphate synthase [EC:2.5.1.88]
C    00902 Monoterpenoid biosynthesis
C    00909 Sesquiterpenoid and triterpenoid biosynthesis
C    00904 Diterpenoid biosynthesis
C    00906 Carotenoid biosynthesis [PATH:tfu00906]
D      Tfu_3076 phytoene synthase	K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D      Tfu_3075 putative phytoene desaturase	K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D      Tfu_3088 putative lycopene cyclase	K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
D      Tfu_3090 putative beta-carotene desaturase/methylase	K09879 crtU; carotenoid phi-ring synthase / carotenoid chi-ring synthase [EC:1.3.99.39 1.3.99.40]
C    00905 Brassinosteroid biosynthesis
C    00981 Insect hormone biosynthesis
C    00908 Zeatin biosynthesis
C    00903 Limonene degradation
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00907 Pinene, camphor and geraniol degradation [PATH:tfu00907]
D      Tfu_0067 short chain enoyl-CoA hydratase / Enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0590 short chain enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_1278 thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      Tfu_1903 thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    01052 Type I polyketide structures
C    00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C    01051 Biosynthesis of ansamycins
D      Tfu_2002 transketolase	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C    01059 Biosynthesis of enediyne antibiotics [PATH:tfu01059]
D      Tfu_1239 putative hydrolase	K21159 sgcF; epoxide hydrolase
D      Tfu_2802 putative cytochrome P450	K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
D      Tfu_1748 cytochrome P450-family protein	K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
D      Tfu_1257 cytochrome P450 monooxygenase	K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
D      Tfu_2976 cytochrome P450-family protein	K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
C    01056 Biosynthesis of type II polyketide backbone [PATH:tfu01056]
D      Tfu_1218 actinorhodin polyketide beta-ketoacyl synthase alpha subunit / 3-oxoacyl-ACP synthase I	K05551 actI1; minimal PKS ketosynthase (KS/KS alpha) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D      Tfu_1219 actinorhodin polyketide beta-ketoacyl synthase beta subunit / 3-oxoacyl-ACP synthase II	K05552 actI2; minimal PKS chain-length factor (CLF/KS beta) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D      Tfu_1220 actinorhodin polyketide synthase acyl carrier protein / 3-oxoacyl-ACP synthase acyl carrier protein	K05553 actI3; minimal PKS acyl carrier protein
D      Tfu_1221 ketoacyl reductase	K12420 actIII; ketoreductase [EC:1.1.1.-]
D      Tfu_1222 actinorhodin polyketide synthase bifunctional cyclase/dehydratase	K05554 actVII; aromatase [EC:4.2.1.-]
C    01057 Biosynthesis of type II polyketide products [PATH:tfu01057]
D      Tfu_1234 putative hydrolase	K14630 actVA5; two-component flavin-dependent monooxygenase [EC:1.14.14.-]
D      Tfu_1217 putative cyclase II	K15926 jadI; cyclase
D      Tfu_1216 conserved hypothetical protein	K15928 jadH; bifunctional hydroxylase/dehydrase
C    00253 Tetracycline biosynthesis [PATH:tfu00253]
D      Tfu_1218 actinorhodin polyketide beta-ketoacyl synthase alpha subunit / 3-oxoacyl-ACP synthase I	K05551 actI1; minimal PKS ketosynthase (KS/KS alpha) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D      Tfu_1219 actinorhodin polyketide beta-ketoacyl synthase beta subunit / 3-oxoacyl-ACP synthase II	K05552 actI2; minimal PKS chain-length factor (CLF/KS beta) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D      Tfu_1220 actinorhodin polyketide synthase acyl carrier protein / 3-oxoacyl-ACP synthase acyl carrier protein	K05553 actI3; minimal PKS acyl carrier protein
D      Tfu_1221 ketoacyl reductase	K12420 actIII; ketoreductase [EC:1.1.1.-]
C    00523 Polyketide sugar unit biosynthesis
C    01054 Nonribosomal peptide structures
C    01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:tfu01053]
D      Tfu_1413 isochorismate synthase	K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D      Tfu_1872 isochorismate synthase	K02361 entC; isochorismate synthase [EC:5.4.4.2]
D      Tfu_1873 2; RBL00455	K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D      Tfu_1871 2,3-dihydroxybenzoate-AMP ligase	K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
C    01055 Biosynthesis of vancomycin group antibiotics
B
B  09110 Biosynthesis of other secondary metabolites
C    00940 Phenylpropanoid biosynthesis
C    00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C    00941 Flavonoid biosynthesis
C    00944 Flavone and flavonol biosynthesis
C    00942 Anthocyanin biosynthesis
C    00943 Isoflavonoid biosynthesis
C    00946 Degradation of flavonoids [PATH:tfu00946]
D      Tfu_1607 exo-1,4-beta-glucosidase	K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D      Tfu_1629 beta-glucosidase	K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D      Tfu_0937 beta-glucosidase. Glycosyl Hydrolase family 1	K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C    00901 Indole alkaloid biosynthesis
C    00403 Indole diterpene alkaloid biosynthesis
C    00950 Isoquinoline alkaloid biosynthesis
C    00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C    00996 Biosynthesis of various alkaloids
C    00232 Caffeine metabolism
C    00965 Betalain biosynthesis
C    00966 Glucosinolate biosynthesis
C    00402 Benzoxazinoid biosynthesis
C    00311 Penicillin and cephalosporin biosynthesis [PATH:tfu00311]
D      Tfu_1462 similar to Acetyl esterase (deacetylase)	K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D      Tfu_1644 penicillin amidase	K01434 pac; penicillin G amidase [EC:3.5.1.11]
C    00332 Carbapenem biosynthesis [PATH:tfu00332]
D      Tfu_2179 glutamate 5-kinase	K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D      Tfu_2175 glutamate-5-semialdehyde dehydrogenase	K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C    00261 Monobactam biosynthesis [PATH:tfu00261]
D      Tfu_1863 putative conserved protein MbtH	K05375 mbtH; MbtH protein
D      Tfu_0420 sulfate adenylyltransferase subunit 1	K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D      Tfu_0419 sulfate adenylyltransferase subunit 2	K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D      Tfu_0425 adenylylsulfate kinase	K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D      Tfu_0043 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      Tfu_0042 aspartate semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      Tfu_0791 dihydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      Tfu_1715 dihydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      Tfu_0786 dihydrodipicolinate reductase	K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C    00331 Clavulanic acid biosynthesis
C    00521 Streptomycin biosynthesis [PATH:tfu00521]
D      Tfu_1033 glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      Tfu_0273 glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      Tfu_3099 myo-inositol-1-phosphate synthase	K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D      Tfu_1943 inositol-1(or 4)-monophosphatase	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D      Tfu_1212 archaeal fructose-1 6-bisphosphatase and related enzymes of inositol monophosphatase family	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C    00524 Neomycin, kanamycin and gentamicin biosynthesis
D      Tfu_1033 glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      Tfu_0273 glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
C    00525 Acarbose and validamycin biosynthesis
C    00401 Novobiocin biosynthesis [PATH:tfu00401]
D      Tfu_1208 prephenate dehydrogenase	K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D      Tfu_2253 aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2661 L-aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2223 L-threonine O-3-phosphate decarboxylase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_3018 aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_1151 histidinol phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C    00404 Staurosporine biosynthesis
C    00405 Phenazine biosynthesis
C    00333 Prodigiosin biosynthesis
D      Tfu_1973 (Acyl-carrier protein) S-malonyltransferase	K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D      Tfu_2308 putative 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Tfu_1843 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C    00254 Aflatoxin biosynthesis
C    00998 Biosynthesis of various antibiotics
D      Tfu_1975 acyl carrier protein	K02078 acpP; acyl carrier protein
C    00999 Biosynthesis of various plant secondary metabolites [PATH:tfu00999]
D      Tfu_1065 methionine adenosyltransferase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D      Tfu_1607 exo-1,4-beta-glucosidase	K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D      Tfu_1629 beta-glucosidase	K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D      Tfu_0937 beta-glucosidase. Glycosyl Hydrolase family 1	K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C    00997 Biosynthesis of various other secondary metabolites
B
B  09111 Xenobiotics biodegradation and metabolism
C    00362 Benzoate degradation [PATH:tfu00362]
D      Tfu_0874 3-oxoadipate enol-lactonase	K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D      Tfu_0162 3-oxoadipate enol-lactonase	K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D      Tfu_1278 thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      Tfu_1903 thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      Tfu_1273 putative oxidoreductase	K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D      Tfu_1299 dihydroxynaphthoic acid synthase	K07536 badI; 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-]
D      Tfu_1068 glutaryl-CoA dehydrogenase	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      Tfu_0067 short chain enoyl-CoA hydratase / Enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0590 short chain enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_2399 3-hydroxyacyl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      Tfu_0253 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0436 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2394 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1520 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C    00627 Aminobenzoate degradation [PATH:tfu00627]
D      Tfu_2207 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Tfu_1572 conserved hypothetical protein	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Tfu_0653 acylphosphatase	K01512 acyP; acylphosphatase [EC:3.6.1.7]
D      Tfu_0067 short chain enoyl-CoA hydratase / Enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0590 short chain enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C    00364 Fluorobenzoate degradation
C    00625 Chloroalkane and chloroalkene degradation [PATH:tfu00625]
D      Tfu_2771 putative dehydrogenase	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      Tfu_1489 oxidoreductase	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      Tfu_1270 alcohol dehydrogenase class III	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      Tfu_1775 putative alcohol dehydrogenase (zinc-binding)	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      Tfu_0744 aldehyde dehydrogenase (NAD+)	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1776 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_1471 betaine-aldehyde dehydrogenase	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Tfu_3025 putative alcohol dehydrogenase	K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
C    00361 Chlorocyclohexane and chlorobenzene degradation
C    00623 Toluene degradation
C    00622 Xylene degradation
C    00633 Nitrotoluene degradation
C    00642 Ethylbenzene degradation
D      Tfu_1278 thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      Tfu_1903 thiolase	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    00643 Styrene degradation [PATH:tfu00643]
D      Tfu_2207 amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Tfu_1572 conserved hypothetical protein	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C    00791 Atrazine degradation
C    00930 Caprolactam degradation [PATH:tfu00930]
D      Tfu_1706 putative aldehyde dehydrogenase	K14519 aldH; NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
D      Tfu_0067 short chain enoyl-CoA hydratase / Enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D      Tfu_0590 short chain enoyl-CoA hydratase	K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C    00363 Bisphenol degradation
C    00621 Dioxin degradation
C    00626 Naphthalene degradation [PATH:tfu00626]
D      Tfu_2771 putative dehydrogenase	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      Tfu_1489 oxidoreductase	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      Tfu_1270 alcohol dehydrogenase class III	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D      Tfu_1775 putative alcohol dehydrogenase (zinc-binding)	K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C    00624 Polycyclic aromatic hydrocarbon degradation
C    00365 Furfural degradation
C    00984 Steroid degradation
D      Tfu_2332 putative cholesterol oxidase	K03333 choD; cholesterol oxidase [EC:1.1.3.6]
C    00980 Metabolism of xenobiotics by cytochrome P450
C    00982 Drug metabolism - cytochrome P450
C    00983 Drug metabolism - other enzymes
B
B  09112 Not included in regular maps
C    09113 Global maps only
#
A09120 Genetic Information Processing
B
B  09121 Transcription
C    03020 RNA polymerase [PATH:tfu03020]
D      Tfu_2654 DNA-directed RNA polymerase, beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      Tfu_2653 RNA polymerase I subunit A, N-terminal	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      Tfu_2618 DNA-directed RNA polymerase, alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      Tfu_1063 RNA polymerase, omega subunit	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C    03022 Basal transcription factors
C    03040 Spliceosome
B
B  09122 Translation
C    03010 Ribosome [PATH:tfu03010]
D      Tfu_1191 SSU ribosomal protein S1P	K02945 RP-S1; small subunit ribosomal protein S1
D      Tfu_0676 SSU ribosomal protein S2P	K02967 RP-S2; small subunit ribosomal protein S2
D      Tfu_2640 SSU ribosomal protein S3P	K02982 RP-S3; small subunit ribosomal protein S3
D      Tfu_1013 SSU ribosomal protein S4P	K02986 RP-S4; small subunit ribosomal protein S4
D      Tfu_2629 SSU ribosomal protein S5P	K02988 RP-S5; small subunit ribosomal protein S5
D      Tfu_3095 SSU ribosomal protein S6P	K02990 RP-S6; small subunit ribosomal protein S6
D      Tfu_2650 SSU ribosomal protein S7P	K02992 RP-S7; small subunit ribosomal protein S7
D      Tfu_2632 SSU ribosomal protein S8P	K02994 RP-S8; small subunit ribosomal protein S8
D      Tfu_2613 SSU ribosomal protein S9P	K02996 RP-S9; small subunit ribosomal protein S9
D      Tfu_2647 SSU ribosomal protein S10P	K02946 RP-S10; small subunit ribosomal protein S10
D      Tfu_2619 SSU ribosomal protein S11P	K02948 RP-S11; small subunit ribosomal protein S11
D      Tfu_2651 SSU ribosomal protein S12P	K02950 RP-S12; small subunit ribosomal protein S12
D      Tfu_2620 SSU ribosomal protein S13P	K02952 RP-S13; small subunit ribosomal protein S13
D      Tfu_2633 SSU ribosomal protein S14P	K02954 RP-S14; small subunit ribosomal protein S14
D      Tfu_0783 SSU ribosomal protein S15P	K02956 RP-S15; small subunit ribosomal protein S15
D      Tfu_0662 SSU ribosomal protein S16P	K02959 RP-S16; small subunit ribosomal protein S16
D      Tfu_2637 SSU ribosomal protein S17P	K02961 RP-S17; small subunit ribosomal protein S17
D      Tfu_3093 SSU ribosomal protein S18P	K02963 RP-S18; small subunit ribosomal protein S18
D      Tfu_2642 SSU ribosomal protein S19P	K02965 RP-S19; small subunit ribosomal protein S19
D      Tfu_0827 SSU ribosomal protein S20P	K02968 RP-S20; small subunit ribosomal protein S20
D      Tfu_2657 LSU ribosomal protein L1P	K02863 RP-L1; large subunit ribosomal protein L1
D      Tfu_2643 LSU ribosomal protein L2P	K02886 RP-L2; large subunit ribosomal protein L2
D      Tfu_2646 LSU ribosomal protein L3P	K02906 RP-L3; large subunit ribosomal protein L3
D      Tfu_2645 LSU ribosomal protein L4P	K02926 RP-L4; large subunit ribosomal protein L4
D      Tfu_2634 LSU ribosomal protein L5P	K02931 RP-L5; large subunit ribosomal protein L5
D      Tfu_2631 LSU ribosomal protein L6P	K02933 RP-L6; large subunit ribosomal protein L6
D      Tfu_2655 LSU ribosomal protein L12P	K02935 RP-L7; large subunit ribosomal protein L7/L12
D      Tfu_3092 LSU ribosomal protein L9P	K02939 RP-L9; large subunit ribosomal protein L9
D      Tfu_2656 LSU ribosomal protein L10P	K02864 RP-L10; large subunit ribosomal protein L10
D      Tfu_2658 LSU ribosomal protein L11P	K02867 RP-L11; large subunit ribosomal protein L11
D      Tfu_2614 LSU ribosomal protein L13P	K02871 RP-L13; large subunit ribosomal protein L13
D      Tfu_2636 LSU ribosomal protein L14P	K02874 RP-L14; large subunit ribosomal protein L14
D      Tfu_2627 LSU ribosomal protein L15P	K02876 RP-L15; large subunit ribosomal protein L15
D      Tfu_2639 LSU ribosomal protein L16P	K02878 RP-L16; large subunit ribosomal protein L16
D      Tfu_2617 LSU ribosomal protein L17P	K02879 RP-L17; large subunit ribosomal protein L17
D      Tfu_2630 LSU ribosomal protein L18P	K02881 RP-L18; large subunit ribosomal protein L18
D      Tfu_0666 LSU ribosomal protein L19P	K02884 RP-L19; large subunit ribosomal protein L19
D      Tfu_2064 LSU ribosomal protein L20P	K02887 RP-L20; large subunit ribosomal protein L20
D      Tfu_2182 LSU ribosomal protein L21P	K02888 RP-L21; large subunit ribosomal protein L21
D      Tfu_2641 LSU ribosomal protein L22P	K02890 RP-L22; large subunit ribosomal protein L22
D      Tfu_2644 LSU ribosomal protein L23P	K02892 RP-L23; large subunit ribosomal protein L23
D      Tfu_2635 LSU ribosomal protein L24P	K02895 RP-L24; large subunit ribosomal protein L24
D      Tfu_0416 LSU ribosomal protein L25P	K02897 RP-L25; large subunit ribosomal protein L25
D      Tfu_2181 LSU ribosomal protein L27P	K02899 RP-L27; large subunit ribosomal protein L27
D      Tfu_0645 LSU ribosomal protein L28P	K02902 RP-L28; large subunit ribosomal protein L28
D      Tfu_2638 LSU ribosomal protein L29P	K02904 RP-L29; large subunit ribosomal protein L29
D      Tfu_2628 LSU ribosomal protein L30P	K02907 RP-L30; large subunit ribosomal protein L30
D      Tfu_2420 LSU ribosomal protein L31P	K02909 RP-L31; large subunit ribosomal protein L31
D      Tfu_0650 LSU ribosomal protein L32P	K02911 RP-L32; large subunit ribosomal protein L32
D      Tfu_2667 LSU ribosomal protein L33P	K02913 RP-L33; large subunit ribosomal protein L33
D      Tfu_3117 LSU ribosomal protein L34P	K02914 RP-L34; large subunit ribosomal protein L34
D      Tfu_2065 LSU ribosomal protein L35P	K02916 RP-L35; large subunit ribosomal protein L35
D      Tfu_2621 LSU ribosomal protein L36P	K02919 RP-L36; large subunit ribosomal protein L36
D      Tfu_R0025 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Tfu_R0044 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Tfu_R0067 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Tfu_R0049 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Tfu_R0043 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      Tfu_R0066 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      Tfu_R0048 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      Tfu_R0024 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      Tfu_R0023 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      Tfu_R0042 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      Tfu_R0047 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      Tfu_R0065 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
C    00970 Aminoacyl-tRNA biosynthesis [PATH:tfu00970]
D      Tfu_R0033 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Tfu_R0034 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Tfu_R0009 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Tfu_R0064 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Tfu_R0061 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Tfu_R0037 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Tfu_R0045 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Tfu_R0008 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Tfu_R0017 tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      Tfu_R0057 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      Tfu_R0031 tRNA-Cys	K14222 tRNA-Cys; tRNA Cys
D      Tfu_R0014 tRNA-Gln	K14223 tRNA-Gln; tRNA Gln
D      Tfu_R0010 tRNA-Gln	K14223 tRNA-Gln; tRNA Gln
D      Tfu_R0058 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      Tfu_R0016 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      Tfu_R0015 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      Tfu_R0027 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Tfu_R0030 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Tfu_R0028 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Tfu_R0036 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Tfu_R0060 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Tfu_R0038 tRNA-His	K14226 tRNA-His; tRNA His
D      Tfu_R0001 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      Tfu_R0019 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Tfu_R0055 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Tfu_R0063 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Tfu_R0041 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Tfu_R0011 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Tfu_R0039 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      Tfu_R0040 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      Tfu_R0059 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      Tfu_R0051 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Tfu_R0012 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Tfu_R0013 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Tfu_R0018 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Tfu_R0056 tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
D      Tfu_R0006 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      Tfu_R0020 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      Tfu_R0035 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      Tfu_R0004 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Tfu_R0002 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Tfu_R0062 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Tfu_R0005 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Tfu_R0052 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      Tfu_R0007 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      Tfu_R0054 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      Tfu_R0050 tRNA-Trp	K14235 tRNA-Trp; tRNA Trp
D      Tfu_R0053 tRNA-Tyr	K14236 tRNA-Tyr; tRNA Tyr
D      Tfu_R0026 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Tfu_R0029 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Tfu_R0032 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Tfu_R0022 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Tfu_0623 glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      Tfu_0606 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      Tfu_0609 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      Tfu_0605 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      Tfu_2070 alanyl-tRNA synthetase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      Tfu_2086 aspartyl-tRNA synthetase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      Tfu_0861 glycyl-tRNA synthetase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      Tfu_2108 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      Tfu_0031 seryl-tRNA synthetase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      Tfu_0212 cysteinyl-tRNA synthetase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      Tfu_0389 methionyl-tRNA synthetase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      Tfu_1075 methionyl-tRNA formyltransferase	K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D      Tfu_1936 valyl-tRNA synthetase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      Tfu_2156 leucyl-tRNA synthetase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      Tfu_1120 Isoleucyl-tRNA synthetase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      Tfu_2881 lysyl-tRNA synthetase, class-2	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      Tfu_0269 arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      Tfu_2426 similar to Arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      Tfu_0772 prolyl-tRNA synthetase, bacterial	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      Tfu_0759 histidyl-tRNA synthetase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      Tfu_2061 phenylalanyl-tRNA synthetase, alpha subunit	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      Tfu_2060 phenylalanyl-tRNA synthetase beta subunit	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      Tfu_2043 tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      Tfu_2376 tryptophanyl-tRNA synthetase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C    03013 Nucleocytoplasmic transport
C    03015 mRNA surveillance pathway
C    03008 Ribosome biogenesis in eukaryotes
B
B  09123 Folding, sorting and degradation
C    03060 Protein export [PATH:tfu03060]
D      Tfu_2626 protein translocase subunit secY/sec61 alpha	K03076 secY; preprotein translocase subunit SecY
D      Tfu_2660 protein translocase subunit secE/sec61 gamma	K03073 secE; preprotein translocase subunit SecE
D      Tfu_2014 preprotein translocase SecG subunit	K03075 secG; preprotein translocase subunit SecG
D      Tfu_0387 protein translocase subunit secD / protein translocase subunit secF	K12257 secDF; SecD/SecF fusion protein
D      Tfu_2092 protein translocase subunit yajC	K03210 yajC; preprotein translocase subunit YajC
D      Tfu_3114 putative membrane protein	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      Tfu_0185 preprotein translocase YidC subunit	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      Tfu_2490 protein translocase subunit secA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      Tfu_0761 protein translocase subunit secA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      Tfu_0661 signal recognition particle subunit FFH/SRP54 (srp54)	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      Tfu_R0003 SRP RNA; RNA component of signal recognitionparticle	K01983 ffs; SRP RNA
D      Tfu_0658 signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      Tfu_1391 arsenite-transporting ATPase	K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D      Tfu_1769 Twin-arginine translocation protein TatA/E	K03116 tatA; sec-independent protein translocase protein TatA
D      Tfu_0381 sec-independent protein translocase protein TatB	K03117 tatB; sec-independent protein translocase protein TatB
D      Tfu_1768 Sec-independent protein translocase TatC	K03118 tatC; sec-independent protein translocase protein TatC
D      Tfu_0667 signal peptidase I. Serine peptidase. MEROPS family S26A	K03100 lepB; signal peptidase I [EC:3.4.21.89]
D      Tfu_1122 signal peptidase II. Aspartic peptidase. MEROPS family A08	K03101 lspA; signal peptidase II [EC:3.4.23.36]
D      Tfu_2961 signal peptidase SipW. Serine peptidase. MEROPS family S26B	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C    04141 Protein processing in endoplasmic reticulum
C    04130 SNARE interactions in vesicular transport
C    04120 Ubiquitin mediated proteolysis
C    04122 Sulfur relay system [PATH:tfu04122]
D      Tfu_0595 putative pyridoxal-phosphate-dependent aminotransferase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      Tfu_0354 3-mercaptopyruvate sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      Tfu_2719 thiosulfate sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      Tfu_1014 putative aminotransferase	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D      Tfu_0597 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D      Tfu_0538 molybdopterin synthase subunit MoaE	K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D      Tfu_1348 GTP cyclohydrolase subunit MoaA	K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D      Tfu_2369 conserved hypothetical protein	K03636 moaD; sulfur-carrier protein
D      Tfu_0227 conserved hypothetical protein	K03636 moaD; sulfur-carrier protein
D      Tfu_2736 putative molybdopterin converting factor	K03636 moaD; sulfur-carrier protein
D      Tfu_0520 Rhodanese-like protein	K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D      Tfu_0375 GTP cyclohydrolase subunit MoaC	K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D      Tfu_1038 thiamine biosynthesis protein	K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D      Tfu_1043 ThiS, thiamine-biosynthesis	K03154 thiS; sulfur carrier protein
D      Tfu_2368 cysteine synthase	K21148 cysM; [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase [EC:2.5.1.113]
D      Tfu_2370 Mov34/MPN/PAD-1	K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C    03050 Proteasome [PATH:tfu03050]
D      Tfu_1809 vesicle-fusing ATPase	K13527 mpa; proteasome-associated ATPase
D      Tfu_1789 putative 20S proteasome alpha-subunit	K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D      Tfu_1790 bacterial proteasome, beta component. Threonine peptidase. MEROPS family T01B	K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C    03018 RNA degradation [PATH:tfu03018]
D      Tfu_2183 ribonuclease E and G	K08300 rne; ribonuclease E [EC:3.1.26.12]
D      Tfu_0428 enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Tfu_0784 polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D      Tfu_1440 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal	K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D      Tfu_2421 transcription termination factor Rho	K03628 rho; transcription termination factor Rho
D      Tfu_0805 metal-dependent phosphohydrolase, HD region	K18682 rny; ribonucrease Y [EC:3.1.-.-]
D      Tfu_0792 putative hydrolase of the metallo-beta-lactamase superfamily	K12574 rnj; ribonuclease J [EC:3.1.-.-]
D      Tfu_0196 Heat shock protein Hsp70	K04043 dnaK; molecular chaperone DnaK
D      Tfu_0228 chaperonin Cpn60/TCP-1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      Tfu_2598 chaperonin Cpn60/TCP-1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      Tfu_0323 polyphosphate kinase	K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D      Tfu_3102 metal-dependent phosphohydrolase	K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B  09124 Replication and repair
C    03030 DNA replication [PATH:tfu03030]
D      Tfu_0183 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_1027 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0902 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0714 exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_2347 exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0047 DNA polymerase III, alpha subunit	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      Tfu_0051 ATPase	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      Tfu_2782 DNA polymerase III delta prime subunit	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      Tfu_0823 DNA polymerase III, delta subunit	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      Tfu_0002 DNA polymerase III, beta subunit	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      Tfu_0086 DNA polymerase III beta subunit family protein	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      Tfu_0019 primary replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D      Tfu_0866 DNA primase	K02316 dnaG; DNA primase [EC:2.7.7.101]
D      Tfu_3094 Single-strand binding protein	K03111 ssb; single-strand DNA-binding protein
D      Tfu_2039 hypothetical protein	K03111 ssb; single-strand DNA-binding protein
D      Tfu_1953 conserved hypothetical protein	K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D      Tfu_2145 ribonuclease H	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      Tfu_0603 NAD-dependent DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03410 Base excision repair [PATH:tfu03410]
D      Tfu_0118 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      Tfu_1341 Uracil-DNA glycosylase	K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D      Tfu_2875 HhH-GPD:Iron-sulfur cluster loop	K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D      Tfu_0652 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase	K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D      Tfu_0694 putative DNA repair hydrolase	K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D      Tfu_0498 DNA-3-methyladenine glycosylase I	K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D      Tfu_1918 G/U mismatch-specific uracil-DNA glycosylase	K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D      Tfu_0258 Exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      Tfu_1541 AP endonuclease, family 1:Exodeoxyribonuclease III xth	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      Tfu_1956 Endonuclease IV	K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D      Tfu_0603 NAD-dependent DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03420 Nucleotide excision repair [PATH:tfu03420]
D      Tfu_0424 transcription-repair coupling factor	K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D      Tfu_2024 Excinuclease ABC subunit A	K03701 uvrA; excinuclease ABC subunit A
D      Tfu_1196 Excinuclease ABC subunit B	K03702 uvrB; excinuclease ABC subunit B
D      Tfu_2021 Excinuclease ABC subunit C	K03703 uvrC; excinuclease ABC subunit C
D      Tfu_2580 ATP-dependent DNA helicase PcrA	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      Tfu_0530 superfamily I DNA and RNA helicases	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      Tfu_0524 putative DNA helicase	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      Tfu_0603 NAD-dependent DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03430 Mismatch repair [PATH:tfu03430]
D      Tfu_2580 ATP-dependent DNA helicase PcrA	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      Tfu_0530 superfamily I DNA and RNA helicases	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      Tfu_0524 putative DNA helicase	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      Tfu_0468 Exodeoxyribonuclease VII large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      Tfu_0467 Exodeoxyribonuclease VII small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      Tfu_3094 Single-strand binding protein	K03111 ssb; single-strand DNA-binding protein
D      Tfu_2039 hypothetical protein	K03111 ssb; single-strand DNA-binding protein
D      Tfu_0047 DNA polymerase III, alpha subunit	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      Tfu_0002 DNA polymerase III, beta subunit	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      Tfu_0086 DNA polymerase III beta subunit family protein	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      Tfu_0051 ATPase	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      Tfu_0823 DNA polymerase III, delta subunit	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      Tfu_2782 DNA polymerase III delta prime subunit	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      Tfu_0183 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_1027 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0902 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0714 exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_2347 exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0603 NAD-dependent DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03440 Homologous recombination [PATH:tfu03440]
D      Tfu_3094 Single-strand binding protein	K03111 ssb; single-strand DNA-binding protein
D      Tfu_2039 hypothetical protein	K03111 ssb; single-strand DNA-binding protein
D      Tfu_0004 DNA replication and repair protein RecF	K03629 recF; DNA replication and repair protein RecF
D      Tfu_0852 Recombination protein O, RecO	K03584 recO; DNA repair protein RecO (recombination protein O)
D      Tfu_0044 DNA replication and repair protein RecR	K06187 recR; recombination protein RecR
D      Tfu_0803 DNA recombination protein RecA precursor	K03553 recA; recombination protein RecA
D      Tfu_2094 Holliday junction DNA helicase subunit RuvA	K03550 ruvA; holliday junction DNA helicase RuvA
D      Tfu_2093 Holliday junction DNA helicase subunit RuvB	K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D      Tfu_2095 Holliday junction endonuclease RuvC	K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D      Tfu_0646 ATP-dependent DNA helicase RecG	K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D      Tfu_1753 helicase RecD/TraA	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      Tfu_0047 DNA polymerase III, alpha subunit	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      Tfu_0002 DNA polymerase III, beta subunit	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      Tfu_0086 DNA polymerase III beta subunit family protein	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      Tfu_0051 ATPase	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      Tfu_0823 DNA polymerase III, delta subunit	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      Tfu_2782 DNA polymerase III delta prime subunit	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      Tfu_0183 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_1027 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0902 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0714 exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_2347 exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_1073 primosomal protein N' (replication factor Y) (superfamily II helicase)	K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C    03450 Non-homologous end-joining
C    03460 Fanconi anemia pathway
B
B  09126 Chromosome
C    03082 ATP-dependent chromatin remodeling
C    03083 Polycomb repressive complex
B
B  09125 Information processing in viruses
C    03230 Viral genome structure
C    03240 Viral replication
C    03250 Viral life cycle - HIV-1 [PATH:tfu03250]
D      Tfu_2820 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      Tfu_3069 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C    03260 Virion - Human immunodeficiency virus
C    03271 Virion - Rotavirus
C    03262 Virion - Coronavirus
C    03261 Virion - Influenza virus
C    03263 Virion - Enterovirus
C    03264 Virion - Flavivirus
C    03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C    03266 Virion - Herpesvirus
C    03268 Virion - Orthopoxvirus
C    03267 Virion - Adenovirus
C    03259 Virion - Bacteriophages T4 and T7
C    03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B  09131 Membrane transport
C    02010 ABC transporters [PATH:tfu02010]
D      Tfu_1504 extracellular solute-binding protein, family 3	K15551 tauA; taurine transport system substrate-binding protein
D      Tfu_1503 taurine ABC transporter, permease protein	K15552 tauC; taurine transport system permease protein
D      Tfu_1505 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component	K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D      Tfu_1304 similar to ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components	K15553 ssuA; sulfonate transport system substrate-binding protein
D      Tfu_1306 ABC transporter, permease component	K15554 ssuC; sulfonate transport system permease protein
D      Tfu_1305 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      Tfu_0328 molybdenum ABC transporter, periplasmic binding protein	K02020 modA; molybdate transport system substrate-binding protein
D      Tfu_0327 molybdate ABC transporter, inner membrane subunit	K02018 modB; molybdate transport system permease protein
D      Tfu_0326 ABC-type spermidine/putrescine transport systems ATPase components	K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D      Tfu_1309 putative transporter	K02012 afuA; iron(III) transport system substrate-binding protein
D      Tfu_1307 similar to ABC-type Fe3+ transport system permease component	K02011 afuB; iron(III) transport system permease protein
D      Tfu_1308 ABC-type spermidine/putrescine transport systems ATPase components	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      Tfu_0281 putative polyamine-binding lipoprotein	K11069 potD; spermidine/putrescine transport system substrate-binding protein
D      Tfu_0283 polyamine ABC-transporter, inner membrane subunit	K11070 potC; spermidine/putrescine transport system permease protein
D      Tfu_0282 polyamine ABC-transporter, inner membrane subunit	K11071 potB; spermidine/putrescine transport system permease protein
D      Tfu_0280 spermidine/putrescine ABC transporter ATP-binding subunit	K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D      Tfu_2928 glycine betaine transport system permease protein	K02002 proX; glycine betaine/proline transport system substrate-binding protein
D      Tfu_2929 similar to ABC-type proline/glycine betaine transport system permease component	K02001 proW; glycine betaine/proline transport system permease protein
D      Tfu_2930 glycine betaine/L-proline transport ATP-binding subunit	K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D      Tfu_1763 ABC-type sugar transport systems ATPase components	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      Tfu_0832 multiple sugar transport system substrate-binding protein	K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D      Tfu_0831 multiple sugar transport system permease protein	K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D      Tfu_0830 multiple sugar transport system permease protein	K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D      Tfu_2337 ABC-type glucosylglycerol transport system substrate-binding protein	K10232 aglE; alpha-glucoside transport system substrate-binding protein
D      Tfu_2338 ABC-type glucosylglycerol transport system permease protein	K10233 aglF; alpha-glucoside transport system permease protein
D      Tfu_2339 ABC-type glucosylglycerol transport system permease protein	K10234 aglG; alpha-glucoside transport system permease protein
D      Tfu_1609 ABC-type sugar transport system periplasmic component	K17318 lplA; putative aldouronate transport system substrate-binding protein
D      Tfu_1610 putative transport system integral membrane protein	K17319 lplB; putative aldouronate transport system permease protein
D      Tfu_1611 putative transport system integral membrane protein	K17320 lplC; putative aldouronate transport system permease protein
D      Tfu_0934 putative solute binding lipoprotein	K10240 cebE; cellobiose transport system substrate-binding protein
D      Tfu_0935 multiple sugar transport system permease protein	K10241 cebF; cellobiose transport system permease protein
D      Tfu_0936 multiple sugar transport system permease protein	K10242 cebG; cellobiose transport system permease protein
D      Tfu_1619 putative sugar-binding lipoprotein	K17326 bxlE; xylobiose transport system substrate-binding protein
D      Tfu_1618 possible binding-protein-dependent transport protein	K17327 bxlF; xylobiose transport system permease protein
D      Tfu_1617 putative binding-protein-dependent transport protein	K17328 bxlG; xylobiose transport system permease protein
D      Tfu_1922 solute-binding protein	K10543 xylF; D-xylose transport system substrate-binding protein
D      Tfu_1920 putative ABC transporter transmembrane transport protein	K10544 xylH; D-xylose transport system permease protein
D      Tfu_1921 ABC-type sugar transport system ATPase component	K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D      Tfu_1636 Periplasmic phosphate binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      Tfu_2740 Periplasmic phosphate binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      Tfu_2741 phosphate ABC transporter, permease protein PstC	K02037 pstC; phosphate transport system permease protein
D      Tfu_2742 Phosphate transport system permease protein 2	K02038 pstA; phosphate transport system permease protein
D      Tfu_2743 Phosphate transport system permease protein 1	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      Tfu_0809 extracellular solute-binding protein, family 3	K10005 gluB; glutamate transport system substrate-binding protein
D      Tfu_0808 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	K10006 gluC; glutamate transport system permease protein
D      Tfu_0807 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	K10007 gluD; glutamate transport system permease protein
D      Tfu_0810 ABC-type polar amino acid transport system ATPase component	K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D      Tfu_1186 branched-chain amino acid transport system substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Tfu_0074 ABC branched-chain amino acid transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Tfu_1290 similar to ABC-type branched-chain amino acid transport systems periplasmic component	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Tfu_1779 conserved hypothetical protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Tfu_0077 branched-chain amino acid ABC transporter permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      Tfu_1291 probable amino-acid transmembrane lipoprotein ABC transporter	K01997 livH; branched-chain amino acid transport system permease protein
D      Tfu_1781 possible ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      Tfu_1182 branched-chain amino acid ABC-type transport system permease components	K01997 livH; branched-chain amino acid transport system permease protein
D      Tfu_1780 ABC transporter permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      Tfu_0078 branched-chain amino acid ABC transporter permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      Tfu_1292 similar to ABC-type branched-chain amino acid transport system permease component	K01998 livM; branched-chain amino acid transport system permease protein
D      Tfu_1183 branched-chain amino acid transport system permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      Tfu_1293 ABC-type branched-chain amino acid transport systems ATPase component	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Tfu_0075 ABC-type branched-chain amino acid transport systems ATPase component	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1783 ABC-type branched-chain amino acid transport systems ATPase component	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1184 branched-chain amino acid transport system ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1185 ABC-type branched-chain amino acid transport systems ATPase component	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Tfu_0076 ABC-type branched-chain amino acid transport systems ATPase component	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1782 ABC-type branched-chain amino acid transport systems ATPase component	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1294 ABC-type branched-chain amino acid transport systems ATPase component	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Tfu_0933 ABC transport system substrate-binding protein	K02073 metQ; D-methionine transport system substrate-binding protein
D      Tfu_0932 putative ABC transporter permease protein	K02072 metI; D-methionine transport system permease protein
D      Tfu_0931 ABC-type metal ion transport system ATPase component	K02071 metN; D-methionine transport system ATP-binding protein
D      Tfu_0818 peptide/nickel transport system substrate-binding protein	K13889 gsiB; glutathione transport system substrate-binding protein
D      Tfu_1633 putative solute-binding dependent transport lipoprotein	K13889 gsiB; glutathione transport system substrate-binding protein
D      Tfu_1632 putative ABC transporter permease	K13890 gsiC; glutathione transport system permease protein
D      Tfu_0817 ABC peptide/nickel transport system permease protein	K13890 gsiC; glutathione transport system permease protein
D      Tfu_2292 putative peptide ABC transporter permease protein	K13891 gsiD; glutathione transport system permease protein
D      Tfu_1631 ABC transporter, permease protein	K13891 gsiD; glutathione transport system permease protein
D      Tfu_1630 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal	K13892 gsiA; glutathione transport system ATP-binding protein
D      Tfu_2291 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal	K13892 gsiA; glutathione transport system ATP-binding protein
D      Tfu_1491 putative ABC transporter, periplasmic iron-siderophore binding protein	K25286 fagD; iron-siderophore transport system substrate-binding protein
D      Tfu_1864 similar to iron(III) dicitrate transport permease; RBL00804	K25286 fagD; iron-siderophore transport system substrate-binding protein
D      Tfu_0338 ABC-type Fe3+-siderophore transport system inner membrane subunit	K23186 fepD; iron-siderophore transport system permease protein
D      Tfu_1492 putative ferrichrome transport system permease protein	K23186 fepD; iron-siderophore transport system permease protein
D      Tfu_0337 ABC-type enterobactin transport system inner membrane subunit	K23187 fepG; iron-siderophore transport system permease protein
D      Tfu_1493 putative ferrichrome transport system permease protein	K23187 fepG; iron-siderophore transport system permease protein
D      Tfu_0336 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components	K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D      Tfu_1494 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components	K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D      Tfu_1663 putative ABC transporter substrate-binding protein	K11601 mntC; manganese transport system substrate-binding protein
D      Tfu_1661 putative ABC transporter membrane protein	K11602 mntB; manganese transport system permease protein
D      Tfu_1662 ABC-type Mn/Zn transport systems ATPase component	K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D      Tfu_2304 putative ABC-transporter metal-binding lipoprotein	K09815 znuA; zinc transport system substrate-binding protein
D      Tfu_0857 ABC zinc/manganese transport system permease protein	K09816 znuB; zinc transport system permease protein
D      Tfu_0858 ABC-type Mn/Zn transport systems ATPase component	K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D      Tfu_2314 similar to Uncharacterized conserved protein	K03523 bioY; biotin transport system substrate-specific component
D      Tfu_2312 putative cobalt transport system permease protein	K16783 bioN; biotin transport system permease protein
D      Tfu_2313 ABC-type cobalt transport system ATPase component	K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D      Tfu_0589 ABC-type cobalt transport system	K16785 ecfT; energy-coupling factor transport system permease protein
D      Tfu_0462 nodulation protein J	K09694 nodJ; lipooligosaccharide transport system permease protein
D      Tfu_0461 ABC-type multidrug transport system ATPase component	K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D      Tfu_2477 cell division protein FtsX	K09811 ftsX; cell division transport system permease protein
D      Tfu_2478 cell division ATP-binding protein FtsE	K09812 ftsE; cell division transport system ATP-binding protein
D      Tfu_0635 ABC transporter, ATP-binding protein	K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D      Tfu_0636 ABC transporter, ATP-binding protein	K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C    02060 Phosphotransferase system (PTS) [PATH:tfu02060]
D      Tfu_2765 phosphoenolpyruvate--protein phosphotransferase	K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D      Tfu_2487 phosphoryl transfer system, HPr	K02784 ptsH; phosphocarrier protein HPr
D      Tfu_2489 putative phosphoenolpyruvate-dependent sugar phosphotransferase	K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D      Tfu_0696 putative 6-phosphofructokinase : 1-phosphofructokinase	K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C    03070 Bacterial secretion system [PATH:tfu03070]
D      Tfu_0387 protein translocase subunit secD / protein translocase subunit secF	K12257 secDF; SecD/SecF fusion protein
D      Tfu_2660 protein translocase subunit secE/sec61 gamma	K03073 secE; preprotein translocase subunit SecE
D      Tfu_2014 preprotein translocase SecG subunit	K03075 secG; preprotein translocase subunit SecG
D      Tfu_2626 protein translocase subunit secY/sec61 alpha	K03076 secY; preprotein translocase subunit SecY
D      Tfu_2092 protein translocase subunit yajC	K03210 yajC; preprotein translocase subunit YajC
D      Tfu_3114 putative membrane protein	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      Tfu_0185 preprotein translocase YidC subunit	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      Tfu_2490 protein translocase subunit secA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      Tfu_0761 protein translocase subunit secA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      Tfu_0658 signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      Tfu_0661 signal recognition particle subunit FFH/SRP54 (srp54)	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      Tfu_1769 Twin-arginine translocation protein TatA/E	K03116 tatA; sec-independent protein translocase protein TatA
D      Tfu_0381 sec-independent protein translocase protein TatB	K03117 tatB; sec-independent protein translocase protein TatB
D      Tfu_1768 Sec-independent protein translocase TatC	K03118 tatC; sec-independent protein translocase protein TatC
B
B  09132 Signal transduction
C    02020 Two-component system [PATH:tfu02020]
D      Tfu_1673 phosphodiesterase/alkaline phosphatase D	K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D      Tfu_2909 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal	K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D      Tfu_2910 response regulator receiver	K07776 regX3; two-component system, OmpR family, response regulator RegX3
D      Tfu_1636 Periplasmic phosphate binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      Tfu_2740 Periplasmic phosphate binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      Tfu_1714 conserved hypothetical protein	K07793 tctA; putative tricarboxylic transport membrane protein
D      Tfu_1712 conserved hypothetical protein	K07795 tctC; putative tricarboxylic transport membrane protein
D      Tfu_1995 putative integral membrane transport protein	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      Tfu_0344 signal transduction histidine kinase	K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D      Tfu_0343 response regulator receiver	K07669 mprA; two-component system, OmpR family, response regulator MprA
D      Tfu_0353 trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain	K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D      Tfu_0507 trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain	K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D      Tfu_2495 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal	K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D      Tfu_2496 response regulator receiver	K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D      Tfu_0001 bacterial chromosomal replication initiator protein, DnaA	K02313 dnaA; chromosomal replication initiator protein
D      Tfu_1663 putative ABC transporter substrate-binding protein	K11601 mntC; manganese transport system substrate-binding protein
D      Tfu_1662 ABC-type Mn/Zn transport systems ATPase component	K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D      Tfu_1661 putative ABC transporter membrane protein	K11602 mntB; manganese transport system permease protein
D      Tfu_0368 hypothetical protein	K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D      Tfu_1313 putative citrate lyase beta subunit	K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D      Tfu_1285 citryl-CoA lyase	K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D      Tfu_0341 citryl-CoA lyase	K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D      Tfu_0562 malate dehydrogenase (oxaloacetate decarboxylating)	K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D      Tfu_2390 malate dehydrogenase (oxaloacetate decarboxylating)	K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D      Tfu_2959 regulatory protein, LuxR:Response regulator receiver	K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D      Tfu_0289 putative two-component system sensor kinase	K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D      Tfu_0288 regulatory protein, LuxR:Response regulator receiver	K07693 desR; two-component system, NarL family, response regulator DesR
D      Tfu_3046 GAF:ATP-binding region, ATPase-like	K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D      Tfu_2950 regulatory protein, LuxR:Response regulator receiver	K07695 devR; two-component system, NarL family, response regulator DevR
D      Tfu_3035 regulatory protein, LuxR:Response regulator receiver	K07695 devR; two-component system, NarL family, response regulator DevR
D      Tfu_2271 hypothetical protein	K02279 cpaB; pilus assembly protein CpaB
D      Tfu_0369 conserved hypothetical protein	K02279 cpaB; pilus assembly protein CpaB
D      Tfu_2272 putative septum site-determining protein	K02282 cpaE; pilus assembly protein CpaE
D      Tfu_2274 putative secretory protein	K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D      Tfu_0128 pilus assembly protein CpaF	K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D      Tfu_2275 putative integral membrane protein	K12510 tadB; tight adherence protein B
D      Tfu_0127 putative integral membrane protein	K12510 tadB; tight adherence protein B
D      Tfu_2276 putative integral membrane protein	K12511 tadC; tight adherence protein C
D      Tfu_0982 L-glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Tfu_0988 L-glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Tfu_0253 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0436 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2394 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1520 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1477 TrapT family, DctM subunit, C4-dicarboxylate transport	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      Tfu_0117 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      Tfu_0638 putative cytochrome oxidase subunit I	K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D      Tfu_0766 highly similar to cytochrome D ubiquinol oxidase subunit I	K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D      Tfu_0637 cytochrome bd ubiquinol oxidase, subunit II	K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D      Tfu_0765 putative cytochrome D ubiquinol oxidase subunit II	K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D      Tfu_2341 Protein-tyrosine-phosphatase	K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D      Tfu_2712 Cellulase. Glycosyl Hydrolase family 5	K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D      Tfu_2176 endoglucanase. Glycosyl Hydrolase family 9	K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D      Tfu_0901 Cellulase. Glycosyl Hydrolase family 5	K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D      Tfu_1074 endoglucanase. Glycosyl Hydrolase family 6	K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D      Tfu_1627 cellulose 1,4-beta-cellobiosidase / endoglucanase. Glycosyl Hydrolase family 9	K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D      Tfu_0620 cellobiohydrolase. Glycosyl Hydrolase family 6	K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
C    04010 MAPK signaling pathway
C    04013 MAPK signaling pathway - fly
C    04016 MAPK signaling pathway - plant
C    04011 MAPK signaling pathway - yeast
C    04012 ErbB signaling pathway
C    04014 Ras signaling pathway
C    04015 Rap1 signaling pathway
C    04310 Wnt signaling pathway
C    04330 Notch signaling pathway
C    04340 Hedgehog signaling pathway
C    04341 Hedgehog signaling pathway - fly
C    04350 TGF-beta signaling pathway
C    04390 Hippo signaling pathway
C    04391 Hippo signaling pathway - fly
C    04392 Hippo signaling pathway - multiple species
C    04370 VEGF signaling pathway
C    04371 Apelin signaling pathway
C    04630 JAK-STAT signaling pathway
C    04064 NF-kappa B signaling pathway
C    04668 TNF signaling pathway
C    04066 HIF-1 signaling pathway
C    04068 FoxO signaling pathway
C    04020 Calcium signaling pathway
C    04070 Phosphatidylinositol signaling system
C    04072 Phospholipase D signaling pathway
C    04071 Sphingolipid signaling pathway
C    04024 cAMP signaling pathway
C    04022 cGMP-PKG signaling pathway
C    04151 PI3K-Akt signaling pathway
C    04152 AMPK signaling pathway
C    04150 mTOR signaling pathway
C    04075 Plant hormone signal transduction
B
B  09133 Signaling molecules and interaction
C    04080 Neuroactive ligand-receptor interaction
C    04060 Cytokine-cytokine receptor interaction
C    04061 Viral protein interaction with cytokine and cytokine receptor
C    04512 ECM-receptor interaction
C    04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B  09141 Transport and catabolism
C    04144 Endocytosis
C    04145 Phagosome
C    04142 Lysosome
C    04146 Peroxisome
C    04140 Autophagy - animal
C    04138 Autophagy - yeast
C    04136 Autophagy - other
C    04137 Mitophagy - animal
C    04139 Mitophagy - yeast
C    04148 Efferocytosis
D      Tfu_1543 arginase	K01476 rocF; arginase [EC:3.5.3.1]
B
B  09143 Cell growth and death
C    04110 Cell cycle
C    04111 Cell cycle - yeast
C    04112 Cell cycle - Caulobacter
C    04113 Meiosis - yeast
C    04114 Oocyte meiosis
C    04210 Apoptosis
C    04214 Apoptosis - fly
C    04215 Apoptosis - multiple species
C    04216 Ferroptosis
C    04217 Necroptosis
C    04115 p53 signaling pathway
C    04218 Cellular senescence
B
B  09144 Cellular community - eukaryotes
C    04510 Focal adhesion
C    04520 Adherens junction
C    04530 Tight junction
C    04540 Gap junction
C    04550 Signaling pathways regulating pluripotency of stem cells
B
B  09145 Cellular community - prokaryotes
C    02024 Quorum sensing [PATH:tfu02024]
D      Tfu_2350 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase	K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D      Tfu_1434 possible solute binding protein of ABC transporter system	K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D      Tfu_1186 branched-chain amino acid transport system substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Tfu_0074 ABC branched-chain amino acid transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Tfu_1290 similar to ABC-type branched-chain amino acid transport systems periplasmic component	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Tfu_1779 conserved hypothetical protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Tfu_0077 branched-chain amino acid ABC transporter permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      Tfu_1291 probable amino-acid transmembrane lipoprotein ABC transporter	K01997 livH; branched-chain amino acid transport system permease protein
D      Tfu_1781 possible ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      Tfu_1182 branched-chain amino acid ABC-type transport system permease components	K01997 livH; branched-chain amino acid transport system permease protein
D      Tfu_1780 ABC transporter permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      Tfu_0078 branched-chain amino acid ABC transporter permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      Tfu_1292 similar to ABC-type branched-chain amino acid transport system permease component	K01998 livM; branched-chain amino acid transport system permease protein
D      Tfu_1183 branched-chain amino acid transport system permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      Tfu_1293 ABC-type branched-chain amino acid transport systems ATPase component	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Tfu_0075 ABC-type branched-chain amino acid transport systems ATPase component	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1783 ABC-type branched-chain amino acid transport systems ATPase component	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1184 branched-chain amino acid transport system ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1185 ABC-type branched-chain amino acid transport systems ATPase component	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Tfu_0076 ABC-type branched-chain amino acid transport systems ATPase component	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1782 ABC-type branched-chain amino acid transport systems ATPase component	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1294 ABC-type branched-chain amino acid transport systems ATPase component	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Tfu_0153 pectate lyase/Amb allergen	K01728 pel; pectate lyase [EC:4.2.2.2]
D      Tfu_2168 pectate lyase	K01728 pel; pectate lyase [EC:4.2.2.2]
D      Tfu_1998 putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_1031 long-chain fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_2158 putative long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_1733 putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_0117 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      Tfu_0900 Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5	K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D      Tfu_0910 ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Tfu_1821 putative peptide transport system substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Tfu_0911 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Tfu_1820 putative peptide transport system permease protein	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Tfu_1822 oligopeptide transport integral membrane protein	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Tfu_0912 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Tfu_1819 ATPase components of various ABC-type transport systems contain duplicated ATPase	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Tfu_0913 oligopeptide/dipeptide ABC transporter, ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Tfu_3114 putative membrane protein	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      Tfu_0185 preprotein translocase YidC subunit	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      Tfu_0387 protein translocase subunit secD / protein translocase subunit secF	K12257 secDF; SecD/SecF fusion protein
D      Tfu_2660 protein translocase subunit secE/sec61 gamma	K03073 secE; preprotein translocase subunit SecE
D      Tfu_2014 preprotein translocase SecG subunit	K03075 secG; preprotein translocase subunit SecG
D      Tfu_2626 protein translocase subunit secY/sec61 alpha	K03076 secY; preprotein translocase subunit SecY
D      Tfu_2092 protein translocase subunit yajC	K03210 yajC; preprotein translocase subunit YajC
D      Tfu_2490 protein translocase subunit secA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      Tfu_0761 protein translocase subunit secA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      Tfu_0658 signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      Tfu_0661 signal recognition particle subunit FFH/SRP54 (srp54)	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C    05111 Biofilm formation - Vibrio cholerae
C    02025 Biofilm formation - Pseudomonas aeruginosa
C    02026 Biofilm formation - Escherichia coli
B
B  09142 Cell motility
C    02030 Bacterial chemotaxis
C    02040 Flagellar assembly
D      Tfu_1407 RNA polymerase sigma factor	K03086 rpoD; RNA polymerase primary sigma factor
D      Tfu_2139 carbamoyl-phosphate synthase L chain, ATP-binding	K03086 rpoD; RNA polymerase primary sigma factor
D      Tfu_0867 sigma-70 factor	K03086 rpoD; RNA polymerase primary sigma factor
C    04814 Motor proteins
C    04820 Cytoskeleton in muscle cells
D      Tfu_0428 enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C    04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B  09151 Immune system
C    04640 Hematopoietic cell lineage
C    04610 Complement and coagulation cascades
C    04611 Platelet activation
C    04613 Neutrophil extracellular trap formation
C    04620 Toll-like receptor signaling pathway
C    04624 Toll and Imd signaling pathway
C    04621 NOD-like receptor signaling pathway
C    04622 RIG-I-like receptor signaling pathway
C    04623 Cytosolic DNA-sensing pathway
C    04625 C-type lectin receptor signaling pathway
C    04650 Natural killer cell mediated cytotoxicity
C    04612 Antigen processing and presentation
C    04660 T cell receptor signaling pathway
C    04658 Th1 and Th2 cell differentiation
C    04659 Th17 cell differentiation
C    04657 IL-17 signaling pathway
C    04662 B cell receptor signaling pathway
C    04664 Fc epsilon RI signaling pathway
C    04666 Fc gamma R-mediated phagocytosis
C    04670 Leukocyte transendothelial migration
C    04672 Intestinal immune network for IgA production
C    04062 Chemokine signaling pathway
B
B  09152 Endocrine system
C    04911 Insulin secretion
C    04910 Insulin signaling pathway
C    04922 Glucagon signaling pathway
C    04923 Regulation of lipolysis in adipocytes
C    04920 Adipocytokine signaling pathway
C    03320 PPAR signaling pathway
C    04929 GnRH secretion
C    04912 GnRH signaling pathway
C    04913 Ovarian steroidogenesis
C    04915 Estrogen signaling pathway
C    04914 Progesterone-mediated oocyte maturation
C    04917 Prolactin signaling pathway
C    04921 Oxytocin signaling pathway
C    04926 Relaxin signaling pathway
C    04935 Growth hormone synthesis, secretion and action
C    04918 Thyroid hormone synthesis
C    04919 Thyroid hormone signaling pathway
C    04928 Parathyroid hormone synthesis, secretion and action
C    04916 Melanogenesis
C    04924 Renin secretion
C    04614 Renin-angiotensin system
C    04925 Aldosterone synthesis and secretion
C    04927 Cortisol synthesis and secretion
B
B  09153 Circulatory system
C    04260 Cardiac muscle contraction
C    04261 Adrenergic signaling in cardiomyocytes
C    04270 Vascular smooth muscle contraction
B
B  09154 Digestive system
C    04970 Salivary secretion
C    04971 Gastric acid secretion
C    04972 Pancreatic secretion
C    04976 Bile secretion
C    04973 Carbohydrate digestion and absorption
C    04974 Protein digestion and absorption
C    04975 Fat digestion and absorption
C    04979 Cholesterol metabolism
C    04977 Vitamin digestion and absorption
C    04980 Cobalamin transport and metabolism [PATH:tfu04980]
D      Tfu_2404 ATP:cob(I)alamin adenosyltransferase	K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      Tfu_2763 ArgK protein	K07588 MMAA; GTPase [EC:3.6.5.-]
D      Tfu_2762 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      Tfu_2761 methylmalonyl-CoA mutase	K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D      Tfu_1825 methionine synthase (B12-dependent)	K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C    04978 Mineral absorption
B
B  09155 Excretory system
C    04962 Vasopressin-regulated water reabsorption
C    04960 Aldosterone-regulated sodium reabsorption
C    04961 Endocrine and other factor-regulated calcium reabsorption
C    04964 Proximal tubule bicarbonate reclamation
C    04966 Collecting duct acid secretion
B
B  09156 Nervous system
C    04724 Glutamatergic synapse
C    04727 GABAergic synapse
C    04725 Cholinergic synapse
C    04728 Dopaminergic synapse
C    04726 Serotonergic synapse
C    04720 Long-term potentiation
C    04730 Long-term depression
C    04723 Retrograde endocannabinoid signaling
C    04721 Synaptic vesicle cycle
C    04722 Neurotrophin signaling pathway
B
B  09157 Sensory system
C    04744 Phototransduction
C    04745 Phototransduction - fly
C    04740 Olfactory transduction
C    04742 Taste transduction
C    04750 Inflammatory mediator regulation of TRP channels
B
B  09158 Development and regeneration
C    04320 Dorso-ventral axis formation
C    04360 Axon guidance
C    04361 Axon regeneration
C    04380 Osteoclast differentiation
B
B  09149 Aging
C    04211 Longevity regulating pathway
C    04212 Longevity regulating pathway - worm
C    04213 Longevity regulating pathway - multiple species
B
B  09159 Environmental adaptation
C    04710 Circadian rhythm
C    04713 Circadian entrainment
C    04711 Circadian rhythm - fly
C    04712 Circadian rhythm - plant
C    04714 Thermogenesis
C    04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B  09161 Cancer: overview
C    05200 Pathways in cancer
C    05202 Transcriptional misregulation in cancer
C    05206 MicroRNAs in cancer
C    05205 Proteoglycans in cancer
C    05204 Chemical carcinogenesis - DNA adducts
C    05207 Chemical carcinogenesis - receptor activation
C    05208 Chemical carcinogenesis - reactive oxygen species
C    05203 Viral carcinogenesis
C    05230 Central carbon metabolism in cancer
C    05231 Choline metabolism in cancer
C    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B  09162 Cancer: specific types
C    05210 Colorectal cancer
C    05212 Pancreatic cancer
C    05225 Hepatocellular carcinoma
C    05226 Gastric cancer
C    05214 Glioma
C    05216 Thyroid cancer
C    05221 Acute myeloid leukemia
C    05220 Chronic myeloid leukemia
C    05217 Basal cell carcinoma
C    05218 Melanoma
C    05211 Renal cell carcinoma
C    05219 Bladder cancer
C    05215 Prostate cancer
C    05213 Endometrial cancer
C    05224 Breast cancer
C    05222 Small cell lung cancer
C    05223 Non-small cell lung cancer
B
B  09172 Infectious disease: viral
C    05166 Human T-cell leukemia virus 1 infection
C    05170 Human immunodeficiency virus 1 infection
C    05161 Hepatitis B
C    05160 Hepatitis C
C    05171 Coronavirus disease - COVID-19
C    05164 Influenza A
C    05162 Measles
C    05168 Herpes simplex virus 1 infection
C    05163 Human cytomegalovirus infection
C    05167 Kaposi sarcoma-associated herpesvirus infection
C    05169 Epstein-Barr virus infection
C    05165 Human papillomavirus infection
B
B  09171 Infectious disease: bacterial
C    05110 Vibrio cholerae infection
C    05120 Epithelial cell signaling in Helicobacter pylori infection
C    05130 Pathogenic Escherichia coli infection
C    05132 Salmonella infection
C    05131 Shigellosis
C    05135 Yersinia infection
C    05133 Pertussis
C    05134 Legionellosis
C    05150 Staphylococcus aureus infection
C    05152 Tuberculosis
C    05100 Bacterial invasion of epithelial cells
B
B  09174 Infectious disease: parasitic
C    05146 Amoebiasis
C    05144 Malaria
C    05145 Toxoplasmosis
C    05140 Leishmaniasis
C    05142 Chagas disease
C    05143 African trypanosomiasis
B
B  09163 Immune disease
C    05310 Asthma
C    05322 Systemic lupus erythematosus
C    05323 Rheumatoid arthritis
C    05320 Autoimmune thyroid disease
C    05321 Inflammatory bowel disease
C    05330 Allograft rejection
C    05332 Graft-versus-host disease
C    05340 Primary immunodeficiency
B
B  09164 Neurodegenerative disease
C    05010 Alzheimer disease
C    05012 Parkinson disease
C    05014 Amyotrophic lateral sclerosis
C    05016 Huntington disease
C    05017 Spinocerebellar ataxia
C    05020 Prion disease
C    05022 Pathways of neurodegeneration - multiple diseases
B
B  09165 Substance dependence
C    05030 Cocaine addiction
C    05031 Amphetamine addiction
C    05032 Morphine addiction
C    05033 Nicotine addiction
C    05034 Alcoholism
B
B  09166 Cardiovascular disease
C    05417 Lipid and atherosclerosis
C    05418 Fluid shear stress and atherosclerosis
C    05410 Hypertrophic cardiomyopathy
C    05412 Arrhythmogenic right ventricular cardiomyopathy
C    05414 Dilated cardiomyopathy
C    05415 Diabetic cardiomyopathy
C    05416 Viral myocarditis
B
B  09167 Endocrine and metabolic disease
C    04930 Type II diabetes mellitus
C    04940 Type I diabetes mellitus
C    04950 Maturity onset diabetes of the young
C    04936 Alcoholic liver disease
C    04932 Non-alcoholic fatty liver disease
C    04931 Insulin resistance
C    04933 AGE-RAGE signaling pathway in diabetic complications
C    04934 Cushing syndrome
B
B  09175 Drug resistance: antimicrobial
C    01501 beta-Lactam resistance [PATH:tfu01501]
D      Tfu_2486 beta-N-acetylhexosaminidase. Glycosyl Hydrolase family 3	K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D      Tfu_2917 integral membrane protein	K02172 blaR1; bla regulator protein blaR1
D      Tfu_2916 similar to transcriptional regulator	K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D      Tfu_1104 peptidoglycan glycosyltransferase	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C    01502 Vancomycin resistance [PATH:tfu01502]
D      Tfu_0633 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      Tfu_1640 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      Tfu_2606 alanine racemase	K01775 alr; alanine racemase [EC:5.1.1.1]
D      Tfu_1106 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D      Tfu_1107 Phospho-N-acetylmuramoyl-pentapeptide-transferase	K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D      Tfu_1110 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D      Tfu_0368 hypothetical protein	K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C    01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tfu01503]
D      Tfu_2753 cell wall hydrolase/autolysin	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      Tfu_2820 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      Tfu_3069 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B  09176 Drug resistance: antineoplastic
C    01521 EGFR tyrosine kinase inhibitor resistance
C    01524 Platinum drug resistance
C    01523 Antifolate resistance
C    01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B  09181 Protein families: metabolism
C    01000 Enzymes [BR:tfu01000]
C    01001 Protein kinases [BR:tfu01001]
D      Tfu_0406 Tyrosine protein kinase:Serine/threonine protein kinase	K22893 pknH; serine/threonine kinase PknH [EC:2.7.11.1]
D      Tfu_3066 serine/threonine protein kinase	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      Tfu_1041 Tyrosine protein kinase:Serine/threonine protein kinase:PASTA	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      Tfu_3065 Tyrosine protein kinase:Serine/threonine protein kinase	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      Tfu_2361 Tyrosine protein kinase:Serine/threonine protein kinase	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      Tfu_2375 Tyrosine protein kinase:Serine/threonine protein kinase	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      Tfu_2074 Tyrosine protein kinase:Serine/threonine protein kinase	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      Tfu_1756 Tyrosine protein kinase:Serine/threonine protein kinase	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      Tfu_1658 Tyrosine protein kinase:Serine/threonine protein kinase:Sel1-like repeat	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      Tfu_0454 Tyrosine protein kinase:Serine/threonine protein kinase	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      Tfu_0601 serine/threonine protein kinase	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      Tfu_1342 Tyrosine protein kinase:Serine/threonine protein kinase	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      Tfu_1514 serine/threonine protein kinase	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      Tfu_2845 Tyrosine protein kinase:Serine/threonine protein kinase	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D      Tfu_0560 putative anti-sigma factor	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D      Tfu_0177 hypothetical protein	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D      Tfu_0391 hypothetical protein	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D      Tfu_1352 hypothetical protein	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D      Tfu_2967 conserved hypothetical protein	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D      Tfu_2909 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal	K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D      Tfu_0344 signal transduction histidine kinase	K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D      Tfu_2495 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal	K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D      Tfu_0256 signal transduction histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      Tfu_1329 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      Tfu_0289 putative two-component system sensor kinase	K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D      Tfu_3046 GAF:ATP-binding region, ATPase-like	K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D      Tfu_2857 ATP-binding region, ATPase-like	K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D      Tfu_0555 signal transduction histidine kinase	K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C    01009 Protein phosphatases and associated proteins [BR:tfu01009]
D      Tfu_2505 adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      Tfu_1831 putative heat shock protein, hsp90-family	K04079 HSP90A; molecular chaperone HtpG
D      Tfu_3062 Protein phosphatase 2C-like	K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D      Tfu_0297 Protein phosphatase 2C-like	K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D      Tfu_0136 phosphoserine phosphatase	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C    01002 Peptidases and inhibitors [BR:tfu01002]
D      Tfu_1122 signal peptidase II. Aspartic peptidase. MEROPS family A08	K03101 lspA; signal peptidase II [EC:3.4.23.36]
D      Tfu_1089 hypothetical protein	K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D      Tfu_2589 GMP synthase (glutamine-hydrolyzing)	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      Tfu_1392 conserved hypothetical protein	K07010 K07010; putative glutamine amidotransferase
D      Tfu_1030 putative NLP/P60 family secreted protein	K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D      Tfu_2434 conserved hypothetical protein	K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D      Tfu_2283 similar to Cell wall-associated hydrolases (invasion-associated proteins)	K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D      Tfu_2262 similar to Cell wall-associated hydrolases (invasion-associated proteins)	K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D      Tfu_0190 similar to Cell wall-associated hydrolases (invasion-associated proteins)	K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D      Tfu_1029 putative secreted protein	K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D      Tfu_2747 amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D      Tfu_1173 glutamate synthase (NADH) large subunit	K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D      Tfu_2611 glutamine--fructose-6-phosphate transaminase	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      Tfu_1145 asparagine synthase (glutamine-hydrolysing)	K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D      Tfu_2828 peptidase C56, PfpI	K05520 yhbO; deglycase [EC:3.5.1.124]
D      Tfu_1178 peptidase C56, PfpI	K05520 yhbO; deglycase [EC:3.5.1.124]
D      Tfu_2383 peptidase C60, sortase A and B	K07284 srtA; sortase A [EC:3.4.22.70]
D      Tfu_1638 conserved hypothetical protein	K07052 K07052; CAAX protease family protein
D      Tfu_0509 hypothetical protein	K07052 K07052; CAAX protease family protein
D      Tfu_1444 hypothetical protein	K07052 K07052; CAAX protease family protein
D      Tfu_2204 aminopeptidase N. Metallo peptidase. MEROPS family M01	K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D      Tfu_0368 hypothetical protein	K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D      Tfu_2362 putative proteinase	K07263 pqqL; zinc protease [EC:3.4.24.-]
D      Tfu_2363 putative zinc proteinase	K07263 pqqL; zinc protease [EC:3.4.24.-]
D      Tfu_0503 leucyl aminopeptidase	K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D      Tfu_0995 leucyl aminopeptidase	K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D      Tfu_0495 succinyl-diaminopimelate desuccinylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      Tfu_2624 methionine aminopeptidase, type I	K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D      Tfu_0968 methionine aminopeptidase, type I	K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D      Tfu_1744 xaa-Pro aminopeptidase	K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D      Tfu_2895 Mername-AA223 peptidase. Metallo peptidase. MEROPS family M41	K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D      Tfu_2673 HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B	K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D      Tfu_1008 HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B	K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D      Tfu_2917 integral membrane protein	K02172 blaR1; bla regulator protein blaR1
D      Tfu_2964 hypothetical protein	K06336 tasA; spore coat-associated protein N
D      Tfu_1996 putative integral membrane protein	K24131 prsW; protease PrsW [EC:3.4.-.-]
D      Tfu_0353 trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain	K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D      Tfu_0507 trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain	K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D      Tfu_0484 streptogrisin C. Serine peptidase. MEROPS family S01A	K18546 sprC; streptogrisin C [EC:3.4.21.-]
D      Tfu_2212 prolyl oligopeptidase. Serine peptidase. MEROPS family S09A	K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D      Tfu_1856 prolyl oligopeptidase	K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D      Tfu_0485 putative peptidase	K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D      Tfu_2903 peptidase S13, D-Ala-D-Ala carboxypeptidase C	K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D      Tfu_2193 ATP-dependent Clp protease proteolytic subunit ClpP / ClpP2 peptidase. Serine peptidase. MEROPS family S14	K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D      Tfu_2194 ClpP1 peptidase. Serine peptidase. MEROPS family S14	K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D      Tfu_0539 secreted protein containing a PDZ domain	K07177 K07177; Lon-like protease
D      Tfu_2152 peptidase S24, LexA repressor	K01356 lexA; repressor LexA [EC:3.4.21.88]
D      Tfu_0667 signal peptidase I. Serine peptidase. MEROPS family S26A	K03100 lepB; signal peptidase I [EC:3.4.21.89]
D      Tfu_2961 signal peptidase SipW. Serine peptidase. MEROPS family S26B	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D      Tfu_2349 prolyl aminopeptidase. Serine peptidase. MEROPS family S33	K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D      Tfu_1644 penicillin amidase	K01434 pac; penicillin G amidase [EC:3.5.1.11]
D      Tfu_0579 signal peptide peptidase A. Serine peptidase. MEROPS family S49	K04773 sppA; protease IV [EC:3.4.21.-]
D      Tfu_1026 conserved hypothetical protein	K07059 K07059; rhomboid family protein
D      Tfu_1789 putative 20S proteasome alpha-subunit	K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D      Tfu_1790 bacterial proteasome, beta component. Threonine peptidase. MEROPS family T01B	K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D      Tfu_1368 conserved hypothetical protein	K03568 tldD; TldD protein
C    01003 Glycosyltransferases [BR:tfu01003]
D      Tfu_1850 dolichyl-phosphate beta-D-mannosyltransferase	K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D      Tfu_0385 putative integral membrane protein	K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D      Tfu_2101 Phosphatidylinositol alpha-mannosyltransferase	K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D      Tfu_1764 putative glycosyl transferase	K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D      Tfu_2257 glucosyltransferase	K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D      Tfu_2416 putative teichoic acid linkage unit synthesis (synthesis of undecaprenylpyrophosphate-N-aetylglucosamine)	K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D      Tfu_2028 conserved hypothetical protein	K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D      Tfu_2173 similar to Glycosyltransferases involved in cell wall biogenesis	K22708 tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355]
D      Tfu_2467 conserved hypothetical protein	K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D      Tfu_0166 similar to Glycosyltransferases probably involved in cell wall biogenesis	K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D      Tfu_0573 putative glycosyl transferase	K26815 manT; MMP alpha-(1->4)-mannosyltransferase [EC:2.4.1.393]
D      Tfu_0225 alpha,alpha-trehalose-phosphate synthase (UDP-forming)	K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D      Tfu_1730 conserved hypothetical protein	K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
D      Tfu_1732 conserved hypothetical protein	K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C    01005 Lipopolysaccharide biosynthesis proteins [BR:tfu01005]
D      Tfu_2196 cytidyltransferase-related	K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D      Tfu_2416 putative teichoic acid linkage unit synthesis (synthesis of undecaprenylpyrophosphate-N-aetylglucosamine)	K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D      Tfu_2028 conserved hypothetical protein	K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C    01011 Peptidoglycan biosynthesis and degradation proteins [BR:tfu01011]
D      Tfu_3016 UDP-N-acetylglucosamine 1-carboxyvinyltransferase	K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D      Tfu_2664 UDP-N-acetylmuramate dehydrogenase	K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D      Tfu_1111 UDP-N-acetylmuramate--L-alanine ligase	K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D      Tfu_1108 UDP-N-acetylmuramoylalanine--D-glutamate ligase	K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D      Tfu_1105 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase	K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D      Tfu_0633 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      Tfu_1640 D-alanine--D-alanine ligase	K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D      Tfu_2606 alanine racemase	K01775 alr; alanine racemase [EC:5.1.1.1]
D      Tfu_2162 glutamate racemase	K01776 murI; glutamate racemase [EC:5.1.1.3]
D      Tfu_1107 Phospho-N-acetylmuramoyl-pentapeptide-transferase	K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D      Tfu_1110 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D      Tfu_1838 Undecaprenyl-diphosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D      Tfu_3104 virulence factor MVIN-like	K03980 murJ; putative peptidoglycan lipid II flippase
D      Tfu_2027 similar to Uncharacterized membrane protein putative virulence factor	K03980 murJ; putative peptidoglycan lipid II flippase
D      Tfu_1104 peptidoglycan glycosyltransferase	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D      Tfu_3064 peptidoglycan glycosyltransferase	K05364 pbpA; penicillin-binding protein A
D      Tfu_2903 peptidase S13, D-Ala-D-Ala carboxypeptidase C	K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D      Tfu_0368 hypothetical protein	K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D      Tfu_1030 putative NLP/P60 family secreted protein	K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D      Tfu_2434 conserved hypothetical protein	K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D      Tfu_2283 similar to Cell wall-associated hydrolases (invasion-associated proteins)	K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D      Tfu_2262 similar to Cell wall-associated hydrolases (invasion-associated proteins)	K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D      Tfu_0190 similar to Cell wall-associated hydrolases (invasion-associated proteins)	K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D      Tfu_1029 putative secreted protein	K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D      Tfu_2383 peptidase C60, sortase A and B	K07284 srtA; sortase A [EC:3.4.22.70]
D      Tfu_2068 putative integral membrane protein	K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D      Tfu_2753 cell wall hydrolase/autolysin	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C    01004 Lipid biosynthesis proteins [BR:tfu01004]
D      Tfu_1973 (Acyl-carrier protein) S-malonyltransferase	K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D      Tfu_1974 3-oxoacyl-[acyl-carrier-protein] synthase III	K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D      Tfu_1229 putative 3-oxoacyl-ACP synthase III	K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D      Tfu_1976 3-oxoacyl-[acyl-carrier-protein] synthase II	K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D      Tfu_2308 putative 3-oxoacyl-ACP reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Tfu_1843 3-oxoacyl-[acyl-carrier-protein] reductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Tfu_0531 acyl-CoA thioesterase	K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D      Tfu_1842 Enoyl-[acyl-carrier-protein] reductase (NADH)	K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118]
D      Tfu_0413 Delta-9 acyl-phospholipid desaturase	K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D      Tfu_1218 actinorhodin polyketide beta-ketoacyl synthase alpha subunit / 3-oxoacyl-ACP synthase I	K05551 actI1; minimal PKS ketosynthase (KS/KS alpha) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D      Tfu_1219 actinorhodin polyketide beta-ketoacyl synthase beta subunit / 3-oxoacyl-ACP synthase II	K05552 actI2; minimal PKS chain-length factor (CLF/KS beta) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D      Tfu_1220 actinorhodin polyketide synthase acyl carrier protein / 3-oxoacyl-ACP synthase acyl carrier protein	K05553 actI3; minimal PKS acyl carrier protein
D      Tfu_1221 ketoacyl reductase	K12420 actIII; ketoreductase [EC:1.1.1.-]
D      Tfu_1222 actinorhodin polyketide synthase bifunctional cyclase/dehydratase	K05554 actVII; aromatase [EC:4.2.1.-]
D      Tfu_2808 putative acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_2856 acetyl-coenzyme A synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_1546 putative acyl-CoA synthetase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Tfu_2245 acetoacetyl-CoA synthase	K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D      Tfu_1302 probable 6-carboxyhexanoate--COA ligase	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Tfu_1473 putative pimeloyl-CoA synthetase	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Tfu_1998 putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_1031 long-chain fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_2158 putative long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_1733 putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_0271 phosphate:acyl-[acyl carrier protein] acyltransferase	K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D      Tfu_1036 phospholipid/glycerol acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      Tfu_1417 phospholipid/glycerol acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C    01008 Polyketide biosynthesis proteins [BR:tfu01008]
D      Tfu_1218 actinorhodin polyketide beta-ketoacyl synthase alpha subunit / 3-oxoacyl-ACP synthase I	K05551 actI1; minimal PKS ketosynthase (KS/KS alpha) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D      Tfu_1219 actinorhodin polyketide beta-ketoacyl synthase beta subunit / 3-oxoacyl-ACP synthase II	K05552 actI2; minimal PKS chain-length factor (CLF/KS beta) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D      Tfu_1220 actinorhodin polyketide synthase acyl carrier protein / 3-oxoacyl-ACP synthase acyl carrier protein	K05553 actI3; minimal PKS acyl carrier protein
D      Tfu_1221 ketoacyl reductase	K12420 actIII; ketoreductase [EC:1.1.1.-]
D      Tfu_1222 actinorhodin polyketide synthase bifunctional cyclase/dehydratase	K05554 actVII; aromatase [EC:4.2.1.-]
D      Tfu_1217 putative cyclase II	K15926 jadI; cyclase
D      Tfu_1863 putative conserved protein MbtH	K05375 mbtH; MbtH protein
D      Tfu_1871 2,3-dihydroxybenzoate-AMP ligase	K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D      Tfu_1234 putative hydrolase	K14630 actVA5; two-component flavin-dependent monooxygenase [EC:1.14.14.-]
D      Tfu_2802 putative cytochrome P450	K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
D      Tfu_1748 cytochrome P450-family protein	K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
D      Tfu_1257 cytochrome P450 monooxygenase	K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
D      Tfu_2976 cytochrome P450-family protein	K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
D      Tfu_1239 putative hydrolase	K21159 sgcF; epoxide hydrolase
C    01006 Prenyltransferases [BR:tfu01006]
D      Tfu_1051 putative polyprenyl synthase / dimethylallyltranstransferase	K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D      Tfu_0456 Undecaprenyl pyrophosphate synthetase	K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D      Tfu_3076 phytoene synthase	K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D      Tfu_0815 tRNA isopentenyltransferase	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D      Tfu_0788 1,4-Dihydroxy-2-naphtoate prenyltransferase	K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D      Tfu_2001 protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      Tfu_2460 conserved putative integral membrane protein	K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C    01007 Amino acid related enzymes [BR:tfu01007]
D      Tfu_0623 glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      Tfu_2043 tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      Tfu_2376 tryptophanyl-tRNA synthetase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      Tfu_0212 cysteinyl-tRNA synthetase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      Tfu_0269 arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      Tfu_2426 similar to Arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      Tfu_0389 methionyl-tRNA synthetase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      Tfu_1120 Isoleucyl-tRNA synthetase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      Tfu_1936 valyl-tRNA synthetase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      Tfu_2156 leucyl-tRNA synthetase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      Tfu_2881 lysyl-tRNA synthetase, class-2	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      Tfu_2086 aspartyl-tRNA synthetase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      Tfu_0759 histidyl-tRNA synthetase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      Tfu_0861 glycyl-tRNA synthetase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      Tfu_0031 seryl-tRNA synthetase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      Tfu_0772 prolyl-tRNA synthetase, bacterial	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      Tfu_2108 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      Tfu_2070 alanyl-tRNA synthetase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      Tfu_2061 phenylalanyl-tRNA synthetase, alpha subunit	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      Tfu_2060 phenylalanyl-tRNA synthetase beta subunit	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      Tfu_2253 aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_2661 L-aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Tfu_0568 succinyldiaminopimelate aminotransferase	K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D      Tfu_2223 L-threonine O-3-phosphate decarboxylase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_3018 aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_1151 histidinol phosphate aminotransferase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Tfu_2247 aminotransferase	K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D      Tfu_2054 acetylornithine aminotransferase	K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D      Tfu_0690 4-aminobutyrate aminotransferase	K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D      Tfu_0686 aminotransferase	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Tfu_0301 aminotransferase	K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D      Tfu_2726 glutamate-1-semialdehyde 2,1-aminomutase	K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D      Tfu_0616 branched chain amino acid aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Tfu_2112 putative aminotransferase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Tfu_0246 phosphoserine aminotransferase	K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C    00199 Cytochrome P450 [BR:tfu00199]
C    00194 Photosynthesis proteins [BR:tfu00194]
D      Tfu_2406 H+-transporting two-sector ATPase, delta/epsilon subunit	K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D      Tfu_2407 ATP synthase F1, beta subunit	K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D      Tfu_2408 H+-transporting two-sector ATPase, gamma subunit	K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D      Tfu_2409 ATP synthase F1, alpha subunit	K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D      Tfu_2410 H+-transporting two-sector ATPase, delta (OSCP) subunit	K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D      Tfu_2411 ATP synthase F0, subunit B	K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D      Tfu_2412 ATP synthase F0, C subunit	K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D      Tfu_2413 H+-transporting two-sector ATPase, A subunit	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      Tfu_2414 hypothetical protein	K02116 atpI; ATP synthase protein I
D      Tfu_2415 hypothetical protein	K02116 atpI; ATP synthase protein I
B
B  09182 Protein families: genetic information processing
C    03000 Transcription factors [BR:tfu03000]
D      Tfu_1266 transcriptional regulator, AraC family	K13653 K13653; AraC family transcriptional regulator
D      Tfu_1620 transcriptional regulator, LacI family	K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D      Tfu_2790 transcriptional regulator, LacI family	K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D      Tfu_1710 transcriptional regulator, LacI family	K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D      Tfu_0554 transcriptional regulator, GntR family	K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator
D      Tfu_2941 transcriptional regulator, GntR family	K03710 K03710; GntR family transcriptional regulator
D      Tfu_0033 transcriptional regulator, GntR family	K03710 K03710; GntR family transcriptional regulator
D      Tfu_2943 transcriptional regulator, GntR family	K03710 K03710; GntR family transcriptional regulator
D      Tfu_1626 transcriptional regulator, GntR family	K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D      Tfu_1787 transcriptional regulator, GntR family	K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D      Tfu_1277 transcriptional regulator, GntR family	K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D      Tfu_1289 transcriptional regulator, GntR family	K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D      Tfu_1711 transcriptional regulator, GntR family	K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor
D      Tfu_1404 conserved hypothetical protein	K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D      Tfu_2799 transcriptional regulator, TetR family	K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D      Tfu_0684 transcriptional regulator, AsnC family	K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D      Tfu_0920 transcriptional regulator, AsnC family	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      Tfu_2809 regulatory protein, LuxR	K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D      Tfu_0880 regulatory protein, MarR	K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D      Tfu_0351 helix-turn-helix, Fis-type	K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D      Tfu_0734 regulatory protein, MerR	K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D      Tfu_1511 regulatory protein, MerR	K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D      Tfu_0408 redox-sensitive transcriptional activator SoxR	K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D      Tfu_0199 regulatory protein, MerR	K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D      Tfu_0856 zinc uptake regulator, Fur family	K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D      Tfu_0145 fur family transcriptional regulator	K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D      Tfu_0849 regulatory proteins, IclR	K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D      Tfu_0117 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp	K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D      Tfu_0422 transcriptional regulator, BadM/Rrf2 family	K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D      Tfu_1556 transcriptional regulator, ArsR family	K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D      Tfu_2299 transcriptional regulator, ArsR family	K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D      Tfu_1568 transcriptional regulator, ArsR family	K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D      Tfu_1378 helix-turn-helix motif	K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D      Tfu_0798 helix-turn-helix motif	K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D      Tfu_0249 iron dependent repressor	K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D      Tfu_1664 iron dependent repressor	K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D      Tfu_2916 similar to transcriptional regulator	K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D      Tfu_2553 biotin--acetyl-CoA-carboxylase ligase	K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D      Tfu_2734 AT-rich DNA-binding protein	K01926 rex; redox-sensing transcriptional repressor
D      Tfu_1883 putative regulatory protein	K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D      Tfu_2515 putative WhiB-family transcriptional regulator, WhiB protein	K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D      Tfu_0110 putative regulatory protein	K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D      Tfu_0556 putative WhiB-family transcriptional regulator; putative role in cell cycle control	K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D      Tfu_0299 regulatory protein	K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D      Tfu_0532 putative DNA-binding protein	K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D      Tfu_0952 conserved hypothetical protein	K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D      Tfu_0685 transcriptional regulator, CdaR family	K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D      Tfu_3110 chromosome segregation DNA-binding protein	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D      Tfu_2907 transcriptional regulator, CarD family	K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D      Tfu_2053 transcriptional regulator, ArgR family	K03402 argR; transcriptional regulator of arginine metabolism
D      Tfu_0838 heat-inducible transcription repressor HrcA	K03705 hrcA; heat-inducible transcriptional repressor
D      Tfu_2953 putative transcriptional regulator; RBL02063	K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D      Tfu_2855 similar to Putative stress-responsive transcriptional regulator	K03973 pspC; phage shock protein C
D      Tfu_1053 uracil phosphoribosyltransferase	K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D      Tfu_2389 conserved hypothetical protein	K07735 algH; putative transcriptional regulator
D      Tfu_2150 Protein of unknown function DUF193	K07738 nrdR; transcriptional repressor NrdR
D      Tfu_1101 Protein of unknown function UPF0040	K03925 mraZ; transcriptional regulator MraZ
C    03021 Transcription machinery [BR:tfu03021]
D      Tfu_2618 DNA-directed RNA polymerase, alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      Tfu_2654 DNA-directed RNA polymerase, beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      Tfu_2653 RNA polymerase I subunit A, N-terminal	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      Tfu_1063 RNA polymerase, omega subunit	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D      Tfu_1407 RNA polymerase sigma factor	K03086 rpoD; RNA polymerase primary sigma factor
D      Tfu_2139 carbamoyl-phosphate synthase L chain, ATP-binding	K03086 rpoD; RNA polymerase primary sigma factor
D      Tfu_0867 sigma-70 factor	K03086 rpoD; RNA polymerase primary sigma factor
D      Tfu_2597 putative RNA polymerase ECF-subfamily sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      Tfu_1506 similar to DNA-directed RNA polymerase specialized sigma subunit sigma24 -like protein	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      Tfu_0179 RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      Tfu_0548 RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      Tfu_3106 putative RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      Tfu_0504 RNA polymerase sigma-70 factor, ECF subfamily	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D      Tfu_0559 RNA polymerase sigma factor	K03090 sigB; RNA polymerase sigma-B factor
D      Tfu_0887 RNA polymerase sigma-B factor	K03090 sigB; RNA polymerase sigma-B factor
D      Tfu_1334 RNA polymerase sigma factor	K03090 sigB; RNA polymerase sigma-B factor
D      Tfu_0776 transcription termination factor NusA	K02600 nusA; transcription termination/antitermination protein NusA
D      Tfu_1094 NusB antitermination factor	K03625 nusB; transcription antitermination protein NusB
D      Tfu_2659 transcription antitermination protein nusG	K02601 nusG; transcription termination/antitermination protein NusG
D      Tfu_0122 anti-sigma factor antagonist	K04749 rsbV; anti-sigma B factor antagonist
D      Tfu_1429 anti-sigma factor antagonist	K04749 rsbV; anti-sigma B factor antagonist
D      Tfu_0333 anti-sigma factor antagonist	K04749 rsbV; anti-sigma B factor antagonist
D      Tfu_3055 anti-sigma factor antagonist	K04749 rsbV; anti-sigma B factor antagonist
D      Tfu_0560 putative anti-sigma factor	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D      Tfu_0177 hypothetical protein	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D      Tfu_0391 hypothetical protein	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D      Tfu_1352 hypothetical protein	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D      Tfu_2967 conserved hypothetical protein	K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D      Tfu_0447 prokaryotic transcription elongation factor GreA	K03624 greA; transcription elongation factor GreA
D      Tfu_2421 transcription termination factor Rho	K03628 rho; transcription termination factor Rho
C    03019 Messenger RNA biogenesis [BR:tfu03019]
D      Tfu_2183 ribonuclease E and G	K08300 rne; ribonuclease E [EC:3.1.26.12]
D      Tfu_0651 RNAse III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      Tfu_0792 putative hydrolase of the metallo-beta-lactamase superfamily	K12574 rnj; ribonuclease J [EC:3.1.-.-]
D      Tfu_0805 metal-dependent phosphohydrolase, HD region	K18682 rny; ribonucrease Y [EC:3.1.-.-]
D      Tfu_2269 exonuclease	K13288 orn; oligoribonuclease [EC:3.1.-.-]
D      Tfu_1440 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal	K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D      Tfu_0428 enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Tfu_0784 polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D      Tfu_2421 transcription termination factor Rho	K03628 rho; transcription termination factor Rho
D      Tfu_0196 Heat shock protein Hsp70	K04043 dnaK; molecular chaperone DnaK
D      Tfu_0228 chaperonin Cpn60/TCP-1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      Tfu_2598 chaperonin Cpn60/TCP-1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      Tfu_0323 polyphosphate kinase	K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D      Tfu_3102 metal-dependent phosphohydrolase	K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D      Tfu_2727 Protein of unknown function 1935	K02553 rraA; regulator of ribonuclease activity A
D      Tfu_2020 conserved hypothetical protein	K06958 rapZ; RNase adapter protein RapZ
D      Tfu_1765 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal	K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D      Tfu_2317 ATP-dependent helicase HrpA	K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C    03041 Spliceosome
C    03011 Ribosome [BR:tfu03011]
D      Tfu_1191 SSU ribosomal protein S1P	K02945 RP-S1; small subunit ribosomal protein S1
D      Tfu_0676 SSU ribosomal protein S2P	K02967 RP-S2; small subunit ribosomal protein S2
D      Tfu_2640 SSU ribosomal protein S3P	K02982 RP-S3; small subunit ribosomal protein S3
D      Tfu_1013 SSU ribosomal protein S4P	K02986 RP-S4; small subunit ribosomal protein S4
D      Tfu_2629 SSU ribosomal protein S5P	K02988 RP-S5; small subunit ribosomal protein S5
D      Tfu_3095 SSU ribosomal protein S6P	K02990 RP-S6; small subunit ribosomal protein S6
D      Tfu_2650 SSU ribosomal protein S7P	K02992 RP-S7; small subunit ribosomal protein S7
D      Tfu_2632 SSU ribosomal protein S8P	K02994 RP-S8; small subunit ribosomal protein S8
D      Tfu_2613 SSU ribosomal protein S9P	K02996 RP-S9; small subunit ribosomal protein S9
D      Tfu_2647 SSU ribosomal protein S10P	K02946 RP-S10; small subunit ribosomal protein S10
D      Tfu_2619 SSU ribosomal protein S11P	K02948 RP-S11; small subunit ribosomal protein S11
D      Tfu_2651 SSU ribosomal protein S12P	K02950 RP-S12; small subunit ribosomal protein S12
D      Tfu_2620 SSU ribosomal protein S13P	K02952 RP-S13; small subunit ribosomal protein S13
D      Tfu_2633 SSU ribosomal protein S14P	K02954 RP-S14; small subunit ribosomal protein S14
D      Tfu_0783 SSU ribosomal protein S15P	K02956 RP-S15; small subunit ribosomal protein S15
D      Tfu_0662 SSU ribosomal protein S16P	K02959 RP-S16; small subunit ribosomal protein S16
D      Tfu_2637 SSU ribosomal protein S17P	K02961 RP-S17; small subunit ribosomal protein S17
D      Tfu_3093 SSU ribosomal protein S18P	K02963 RP-S18; small subunit ribosomal protein S18
D      Tfu_2642 SSU ribosomal protein S19P	K02965 RP-S19; small subunit ribosomal protein S19
D      Tfu_0827 SSU ribosomal protein S20P	K02968 RP-S20; small subunit ribosomal protein S20
D      Tfu_2657 LSU ribosomal protein L1P	K02863 RP-L1; large subunit ribosomal protein L1
D      Tfu_2643 LSU ribosomal protein L2P	K02886 RP-L2; large subunit ribosomal protein L2
D      Tfu_2646 LSU ribosomal protein L3P	K02906 RP-L3; large subunit ribosomal protein L3
D      Tfu_2645 LSU ribosomal protein L4P	K02926 RP-L4; large subunit ribosomal protein L4
D      Tfu_2634 LSU ribosomal protein L5P	K02931 RP-L5; large subunit ribosomal protein L5
D      Tfu_2631 LSU ribosomal protein L6P	K02933 RP-L6; large subunit ribosomal protein L6
D      Tfu_3092 LSU ribosomal protein L9P	K02939 RP-L9; large subunit ribosomal protein L9
D      Tfu_2656 LSU ribosomal protein L10P	K02864 RP-L10; large subunit ribosomal protein L10
D      Tfu_2658 LSU ribosomal protein L11P	K02867 RP-L11; large subunit ribosomal protein L11
D      Tfu_2655 LSU ribosomal protein L12P	K02935 RP-L7; large subunit ribosomal protein L7/L12
D      Tfu_2614 LSU ribosomal protein L13P	K02871 RP-L13; large subunit ribosomal protein L13
D      Tfu_2636 LSU ribosomal protein L14P	K02874 RP-L14; large subunit ribosomal protein L14
D      Tfu_2627 LSU ribosomal protein L15P	K02876 RP-L15; large subunit ribosomal protein L15
D      Tfu_2639 LSU ribosomal protein L16P	K02878 RP-L16; large subunit ribosomal protein L16
D      Tfu_2617 LSU ribosomal protein L17P	K02879 RP-L17; large subunit ribosomal protein L17
D      Tfu_2630 LSU ribosomal protein L18P	K02881 RP-L18; large subunit ribosomal protein L18
D      Tfu_0666 LSU ribosomal protein L19P	K02884 RP-L19; large subunit ribosomal protein L19
D      Tfu_2064 LSU ribosomal protein L20P	K02887 RP-L20; large subunit ribosomal protein L20
D      Tfu_2182 LSU ribosomal protein L21P	K02888 RP-L21; large subunit ribosomal protein L21
D      Tfu_2641 LSU ribosomal protein L22P	K02890 RP-L22; large subunit ribosomal protein L22
D      Tfu_2644 LSU ribosomal protein L23P	K02892 RP-L23; large subunit ribosomal protein L23
D      Tfu_2635 LSU ribosomal protein L24P	K02895 RP-L24; large subunit ribosomal protein L24
D      Tfu_2181 LSU ribosomal protein L27P	K02899 RP-L27; large subunit ribosomal protein L27
D      Tfu_0645 LSU ribosomal protein L28P	K02902 RP-L28; large subunit ribosomal protein L28
D      Tfu_2638 LSU ribosomal protein L29P	K02904 RP-L29; large subunit ribosomal protein L29
D      Tfu_2628 LSU ribosomal protein L30P	K02907 RP-L30; large subunit ribosomal protein L30
D      Tfu_2420 LSU ribosomal protein L31P	K02909 RP-L31; large subunit ribosomal protein L31
D      Tfu_0650 LSU ribosomal protein L32P	K02911 RP-L32; large subunit ribosomal protein L32
D      Tfu_2667 LSU ribosomal protein L33P	K02913 RP-L33; large subunit ribosomal protein L33
D      Tfu_3117 LSU ribosomal protein L34P	K02914 RP-L34; large subunit ribosomal protein L34
D      Tfu_2065 LSU ribosomal protein L35P	K02916 RP-L35; large subunit ribosomal protein L35
D      Tfu_2621 LSU ribosomal protein L36P	K02919 RP-L36; large subunit ribosomal protein L36
D      Tfu_0416 LSU ribosomal protein L25P	K02897 RP-L25; large subunit ribosomal protein L25
D      Tfu_R0023 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      Tfu_R0042 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      Tfu_R0047 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      Tfu_R0065 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      Tfu_R0025 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Tfu_R0044 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Tfu_R0067 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Tfu_R0049 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Tfu_R0043 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      Tfu_R0066 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      Tfu_R0048 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      Tfu_R0024 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
C    03009 Ribosome biogenesis [BR:tfu03009]
D      Tfu_0651 RNAse III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      Tfu_2269 exonuclease	K13288 orn; oligoribonuclease [EC:3.1.-.-]
D      Tfu_0848 Small GTP-binding protein domain	K03595 era; GTPase
D      Tfu_2180 putative GTP-binding protein	K03979 obgE; GTPase [EC:3.6.5.-]
D      Tfu_0776 transcription termination factor NusA	K02600 nusA; transcription termination/antitermination protein NusA
D      Tfu_1094 NusB antitermination factor	K03625 nusB; transcription antitermination protein NusB
D      Tfu_2659 transcription antitermination protein nusG	K02601 nusG; transcription termination/antitermination protein NusG
D      Tfu_1206 pseudouridine synthase, Rsu	K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D      Tfu_0405 dimethyladenosine transferase	K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D      Tfu_1076 putative RNA-binding Sun protein	K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D      Tfu_1683 16S rRNA m(2)G 1207 methyltransferase	K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D      Tfu_0647 Conserved hypothetical protein 95	K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D      Tfu_0840 Conserved hypothetical protein 46	K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D      Tfu_3112 Glucose inhibited division protein	K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D      Tfu_1102 bacterial methyltransferase	K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D      Tfu_0386 Protein of unknown function UPF0011	K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D      Tfu_2034 hemolysin A	K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D      Tfu_1634 putative ribosomal RNA methyltransferase	K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D      Tfu_0213 RNA methyltransferase TrmH, group 3	K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D      Tfu_0683 Conserved hypothetical protein 48	K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D      Tfu_1123 ribosomal large subunit pseudouridine synthase D	K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D      Tfu_2603 SSU ribosomal protein S18P alanine acetyltransferase	K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D      Tfu_0377 ribosomal-protein-alanine N-acetyltransferase	K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D      Tfu_0664 16S rRNA processing protein RimM	K02860 rimM; 16S rRNA processing protein RimM
D      Tfu_0795 Conserved hypothetical protein	K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D      Tfu_2183 ribonuclease E and G	K08300 rne; ribonuclease E [EC:3.1.26.12]
D      Tfu_2069 Holliday junction resolvase YqgF	K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D      Tfu_1440 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal	K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D      Tfu_0543 conserved hypothetical protein	K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D      Tfu_1210 Small GTP-binding protein domain:GTP-binding	K03977 engA; GTPase
D      Tfu_0820 Small GTP-binding protein domain	K03665 hflX; GTPase
D      Tfu_1961 translation factor SUA5	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      Tfu_2417 translation factor SUA5	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      Tfu_2090 RelA/SpoT protein	K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D      Tfu_0780 ribosome-binding factor A	K02834 rbfA; ribosome-binding factor A
D      Tfu_0775 conserved hypothetical protein	K09748 rimP; ribosome maturation factor RimP
D      Tfu_2170 Iojap-related protein	K09710 ybeB; ribosome-associated protein
D      Tfu_0845 Protein of unknown function UPF0054	K07042 ybeY; probable rRNA maturation factor
D      Tfu_0473 Conserved hypothetical protein 92	K06942 ychF; ribosome-binding ATPase
D      Tfu_0649 conserved hypothetical protein	K07040 yceD; DUF177 domain-containing protein
C    03016 Transfer RNA biogenesis [BR:tfu03016]
D      Tfu_1526 RNAse Z	K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D      Tfu_1357 conserved hypothetical protein	K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D      Tfu_0623 glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      Tfu_0772 prolyl-tRNA synthetase, bacterial	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      Tfu_1120 Isoleucyl-tRNA synthetase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      Tfu_2156 leucyl-tRNA synthetase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      Tfu_0389 methionyl-tRNA synthetase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      Tfu_0269 arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      Tfu_2426 similar to Arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      Tfu_2881 lysyl-tRNA synthetase, class-2	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      Tfu_2086 aspartyl-tRNA synthetase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      Tfu_2070 alanyl-tRNA synthetase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      Tfu_0861 glycyl-tRNA synthetase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      Tfu_2108 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      Tfu_0031 seryl-tRNA synthetase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      Tfu_0212 cysteinyl-tRNA synthetase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      Tfu_1936 valyl-tRNA synthetase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      Tfu_0759 histidyl-tRNA synthetase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      Tfu_2061 phenylalanyl-tRNA synthetase, alpha subunit	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      Tfu_2060 phenylalanyl-tRNA synthetase beta subunit	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      Tfu_2043 tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      Tfu_2376 tryptophanyl-tRNA synthetase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      Tfu_2922 d-tyrosyl-tRNA(Tyr) deacylase	K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D      Tfu_0843 putative protein kinase C inhibitor (HIT family	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      Tfu_1810 tRNA (adenine-58-N(1)-) methyltransferase	K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D      Tfu_2616 tRNA pseudouridine synthase	K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D      Tfu_0781 tRNA pseudouridine synthase B	K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D      Tfu_0595 putative pyridoxal-phosphate-dependent aminotransferase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      Tfu_1961 translation factor SUA5	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      Tfu_2417 translation factor SUA5	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      Tfu_0815 tRNA isopentenyltransferase	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D      Tfu_0418 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase	K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D      Tfu_3116 ribonuclease P protein	K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D      Tfu_R0021 RNA component of RNaseP	K01978 rnpB; M1 RNA
D      Tfu_2365 RNAse PH	K00989 rph; ribonuclease PH [EC:2.7.7.56]
D      Tfu_1901 HRDC:3'-5' exonuclease	K03684 rnd; ribonuclease D [EC:3.1.13.5]
D      Tfu_0243 2',5' RNA ligase	K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D      Tfu_0027 tRNA-adenosine deaminase	K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D      Tfu_0811 tRNA-i(6)A37 thiotransferase enzyme MiaB	K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D      Tfu_0665 tRNA (Guanine37-N(1)-) methyltransferase	K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D      Tfu_2063 putative rRNA methylase	K03437 spoU; RNA methyltransferase, TrmH family
D      Tfu_0597 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D      Tfu_1014 putative aminotransferase	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D      Tfu_2873 conserved hypothetical protein	K06980 ygfZ; tRNA-modifying protein YgfZ
D      Tfu_1038 thiamine biosynthesis protein	K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D      Tfu_2897 helix-turn-helix, Fis-type	K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D      Tfu_2604 conserved hypothetical protein	K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D      Tfu_2602 O-sialoglycoprotein endopeptidase	K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D      Tfu_2605 Protein of unknown function UPF0079	K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D      Tfu_0784 polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C    03012 Translation factors [BR:tfu03012]
D      Tfu_0778 bacterial translation initiation factor 2 (bIF-2)	K02519 infB; translation initiation factor IF-2
D      Tfu_2066 bacterial translation initiation factor 3 (bIF-3)	K02520 infC; translation initiation factor IF-3
D      Tfu_0677 translation elongation factor Ts (EF-Ts)	K02357 tsf; elongation factor Ts
D      Tfu_2648 translation elongation factor 1A (EF-1A/EF-Tu)	K02358 tuf; elongation factor Tu
D      Tfu_2649 translation elongation factor 2 (EF-2/EF-G)	K02355 fusA; elongation factor G
D      Tfu_2419 bacterial peptide chain release factor 1 (bRF-1)	K02835 prfA; peptide chain release factor 1
D      Tfu_0679 ribosome recycling factor	K02838 frr; ribosome recycling factor
D      Tfu_2418 modification methylase HemK	K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D      Tfu_0417 peptidyl-tRNA hydrolase	K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D      Tfu_2622 bacterial translation initiation factor 1 (bIF-1)	K02518 infA; translation initiation factor IF-1
D      Tfu_1093 translation elongation factor P (EF-P)	K02356 efp; elongation factor P
D      Tfu_2479 bacterial peptide chain release factor 2 (bRF-2)	K02836 prfB; peptide chain release factor 2
D      Tfu_0359 bacterial peptide chain release factor 3 (bRF-3)	K02837 prfC; peptide chain release factor 3
D      Tfu_1190 conserved hypothetical protein	K15034 yaeJ; ribosome-associated protein
C    03110 Chaperones and folding catalysts [BR:tfu03110]
D      Tfu_0200 ATPase	K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D      Tfu_2876 ATPase	K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D      Tfu_2192 ATP-dependent Clp protease ATP-binding subunit ClpX	K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D      Tfu_1831 putative heat shock protein, hsp90-family	K04079 HSP90A; molecular chaperone HtpG
D      Tfu_0196 Heat shock protein Hsp70	K04043 dnaK; molecular chaperone DnaK
D      Tfu_0228 chaperonin Cpn60/TCP-1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      Tfu_2598 chaperonin Cpn60/TCP-1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      Tfu_0198 Heat shock protein DnaJ	K03686 dnaJ; molecular chaperone DnaJ
D      Tfu_0839 Heat shock protein DnaJ	K03686 dnaJ; molecular chaperone DnaJ
D      Tfu_0197 similar to Molecular chaperone GrpE (heat shock protein)	K03687 GRPE; molecular chaperone GrpE
D      Tfu_1214 similar to Molecular chaperone (small heat shock protein)	K13993 HSP20; HSP20 family protein
D      Tfu_1528 heat shock protein Hsp20	K13993 HSP20; HSP20 family protein
D      Tfu_1642 RNA-binding S4	K04762 hslR; ribosome-associated heat shock protein Hsp15
D      Tfu_2599 10 kD chaperone	K04078 groES; chaperonin GroES
D      Tfu_2895 Mername-AA223 peptidase. Metallo peptidase. MEROPS family M41	K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D      Tfu_2413 H+-transporting two-sector ATPase, A subunit	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      Tfu_3079 conserved hypothetical protein	K09796 pccA; periplasmic copper chaperone A
D      Tfu_2820 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      Tfu_3069 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      Tfu_3109 thioredoxin	K03671 TXN; thioredoxin
D      Tfu_0172 thioredoxin	K03671 TXN; thioredoxin
D      Tfu_2392 putative thioredoxin	K05838 ybbN; putative thioredoxin
C    04131 Membrane trafficking [BR:tfu04131]
D      Tfu_2188 nucleoside diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      Tfu_2663 conserved hypothetical protein	K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D      Tfu_1391 arsenite-transporting ATPase	K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D      Tfu_2017 glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      Tfu_2911 phosphoglycerate mutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      Tfu_1179 pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      Tfu_1831 putative heat shock protein, hsp90-family	K04079 HSP90A; molecular chaperone HtpG
D      Tfu_1758 putative transporter	K06902 UMF1; MFS transporter, UMF1 family
C    04121 Ubiquitin system [BR:tfu04121]
D      Tfu_1791 conserved hypothetical protein	K13570 pup; prokaryotic ubiquitin-like protein Pup
C    03051 Proteasome [BR:tfu03051]
D      Tfu_1831 putative heat shock protein, hsp90-family	K04079 HSP90A; molecular chaperone HtpG
D      Tfu_1789 putative 20S proteasome alpha-subunit	K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D      Tfu_1790 bacterial proteasome, beta component. Threonine peptidase. MEROPS family T01B	K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D      Tfu_1809 vesicle-fusing ATPase	K13527 mpa; proteasome-associated ATPase
D      Tfu_1788 conserved hypothetical protein	K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D      Tfu_1771 similar to transcriptional regulator	K24033 pafBC; proteasome accessory factor BC
D      Tfu_1796 putative proteasome component	K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C    03032 DNA replication proteins [BR:tfu03032]
D      Tfu_0628 Histone-like bacterial DNA-binding protein	K03530 hupB; DNA-binding protein HU-beta
D      Tfu_0001 bacterial chromosomal replication initiator protein, DnaA	K02313 dnaA; chromosomal replication initiator protein
D      Tfu_0019 primary replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D      Tfu_0866 DNA primase	K02316 dnaG; DNA primase [EC:2.7.7.101]
D      Tfu_3094 Single-strand binding protein	K03111 ssb; single-strand DNA-binding protein
D      Tfu_2039 hypothetical protein	K03111 ssb; single-strand DNA-binding protein
D      Tfu_0047 DNA polymerase III, alpha subunit	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      Tfu_0002 DNA polymerase III, beta subunit	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      Tfu_0086 DNA polymerase III beta subunit family protein	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      Tfu_0823 DNA polymerase III, delta subunit	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      Tfu_2782 DNA polymerase III delta prime subunit	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      Tfu_0183 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_1027 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0902 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0714 exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_2347 exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0051 ATPase	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      Tfu_1953 conserved hypothetical protein	K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D      Tfu_2145 ribonuclease H	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      Tfu_0603 NAD-dependent DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      Tfu_2131 DNA topoisomerase IV subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      Tfu_0007 DNA gyrase subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      Tfu_2134 DNA topoisomerase (ATP-hydrolyzing)	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      Tfu_0006 DNA gyrase subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      Tfu_2784 DNA topoisomerase I	K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C    03036 Chromosome and associated proteins [BR:tfu03036]
D      Tfu_0651 RNAse III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      Tfu_2868 putative Lsr2-like protein	K26249 lsr2; nucleoid-associated protein Lsr2
D      Tfu_1774 putative Lsr2-like protein	K26249 lsr2; nucleoid-associated protein Lsr2
D      Tfu_2977 putative Lsr2-like protein	K26249 lsr2; nucleoid-associated protein Lsr2
D      Tfu_2877 putative Lsr2-like protein	K26249 lsr2; nucleoid-associated protein Lsr2
D      Tfu_0628 Histone-like bacterial DNA-binding protein	K03530 hupB; DNA-binding protein HU-beta
D      Tfu_0001 bacterial chromosomal replication initiator protein, DnaA	K02313 dnaA; chromosomal replication initiator protein
D      Tfu_0799 conserved hypothetical protein	K04047 dps; starvation-inducible DNA-binding protein
D      Tfu_0920 transcriptional regulator, AsnC family	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      Tfu_0655 condensin subunit Smc	K03529 smc; chromosome segregation protein
D      Tfu_1204 condensin subunit ScpA	K05896 scpA; segregation and condensation protein A
D      Tfu_1205 condensin subunit ScpB	K06024 scpB; segregation and condensation protein B
D      Tfu_2478 cell division ATP-binding protein FtsE	K09812 ftsE; cell division transport system ATP-binding protein
D      Tfu_1104 peptidoglycan glycosyltransferase	K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D      Tfu_0793 ATPase	K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D      Tfu_1112 cell division protein FtsQ	K03589 ftsQ; cell division protein FtsQ
D      Tfu_1109 cell division protein FtsW	K03588 ftsW; cell division protein FtsW
D      Tfu_2477 cell division protein FtsX	K09811 ftsX; cell division transport system permease protein
D      Tfu_1113 cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      Tfu_2753 cell wall hydrolase/autolysin	K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D      Tfu_1116 conserved hypothetical protein	K09772 sepF; cell division inhibitor SepF
D      Tfu_2186 Sfr protein	K05837 rodA; rod shape determining protein RodA
D      Tfu_3111 chromosome segregation ATPase	K03496 parA; chromosome partitioning protein
D      Tfu_1202 putative partitioning or sporulation protein	K03496 parA; chromosome partitioning protein
D      Tfu_3110 chromosome segregation DNA-binding protein	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D      Tfu_3112 Glucose inhibited division protein	K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D      Tfu_0674 tyrosine recombinase XerC subunit	K03733 xerC; integrase/recombinase XerC
D      Tfu_0214 similar to Site-specific recombinase XerD	K04763 xerD; integrase/recombinase XerD
D      Tfu_1201 tyrosine recombinase XerD	K04763 xerD; integrase/recombinase XerD
D      Tfu_0508 ATP-binding protein involved in chromosome partitioning	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      Tfu_2018 Protein of unknown function DUF199	K09762 whiA; cell division protein WhiA
C    03400 DNA repair and recombination proteins [BR:tfu03400]
D      Tfu_0366 methylated-DNA (protein)-cysteine S-methyltransferase	K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D      Tfu_0534 Deoxyribodipyrimidine photo-lyase type I	K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D      Tfu_1341 Uracil-DNA glycosylase	K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D      Tfu_2875 HhH-GPD:Iron-sulfur cluster loop	K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D      Tfu_0118 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      Tfu_2457 putative mutT-like protein	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      Tfu_0097 hypothetical protein	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      Tfu_0229 putative MutT family protein	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      Tfu_2940 mutT-like protein	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      Tfu_1935 deoxyuridine 5'-triphosphate nucleotidohydrolase	K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D      Tfu_1427 DNA-N1-methyladenine dioxygenase	K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D      Tfu_1918 G/U mismatch-specific uracil-DNA glycosylase	K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D      Tfu_0498 DNA-3-methyladenine glycosylase I	K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D      Tfu_0652 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase	K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D      Tfu_0694 putative DNA repair hydrolase	K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D      Tfu_0258 Exodeoxyribonuclease III	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      Tfu_1541 AP endonuclease, family 1:Exodeoxyribonuclease III xth	K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D      Tfu_1956 Endonuclease IV	K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D      Tfu_1400 Endonuclease V	K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D      Tfu_0603 NAD-dependent DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      Tfu_2024 Excinuclease ABC subunit A	K03701 uvrA; excinuclease ABC subunit A
D      Tfu_1196 Excinuclease ABC subunit B	K03702 uvrB; excinuclease ABC subunit B
D      Tfu_2021 Excinuclease ABC subunit C	K03703 uvrC; excinuclease ABC subunit C
D      Tfu_2580 ATP-dependent DNA helicase PcrA	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      Tfu_0530 superfamily I DNA and RNA helicases	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      Tfu_0524 putative DNA helicase	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      Tfu_2654 DNA-directed RNA polymerase, beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      Tfu_2653 RNA polymerase I subunit A, N-terminal	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      Tfu_2618 DNA-directed RNA polymerase, alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      Tfu_1063 RNA polymerase, omega subunit	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D      Tfu_0424 transcription-repair coupling factor	K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D      Tfu_0468 Exodeoxyribonuclease VII large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      Tfu_0467 Exodeoxyribonuclease VII small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      Tfu_0047 DNA polymerase III, alpha subunit	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      Tfu_0002 DNA polymerase III, beta subunit	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      Tfu_0086 DNA polymerase III beta subunit family protein	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      Tfu_0823 DNA polymerase III, delta subunit	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      Tfu_2782 DNA polymerase III delta prime subunit	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      Tfu_0183 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_1027 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0902 DNA polymerase III, epsilon subunit	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0714 exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_2347 exonuclease	K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D      Tfu_0051 ATPase	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      Tfu_3094 Single-strand binding protein	K03111 ssb; single-strand DNA-binding protein
D      Tfu_2039 hypothetical protein	K03111 ssb; single-strand DNA-binding protein
D      Tfu_1753 helicase RecD/TraA	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      Tfu_0803 DNA recombination protein RecA precursor	K03553 recA; recombination protein RecA
D      Tfu_2094 Holliday junction DNA helicase subunit RuvA	K03550 ruvA; holliday junction DNA helicase RuvA
D      Tfu_2093 Holliday junction DNA helicase subunit RuvB	K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D      Tfu_2095 Holliday junction endonuclease RuvC	K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D      Tfu_1073 primosomal protein N' (replication factor Y) (superfamily II helicase)	K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D      Tfu_2711 DNA repair protein RadA	K04485 radA; DNA repair protein RadA/Sms
D      Tfu_0004 DNA replication and repair protein RecF	K03629 recF; DNA replication and repair protein RecF
D      Tfu_0646 ATP-dependent DNA helicase RecG	K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D      Tfu_0852 Recombination protein O, RecO	K03584 recO; DNA repair protein RecO (recombination protein O)
D      Tfu_0044 DNA replication and repair protein RecR	K06187 recR; recombination protein RecR
D      Tfu_2032 DNA repair protein RecN	K03631 recN; DNA repair protein RecN (Recombination protein N)
D      Tfu_1587 CRISPR-associated protein, Cas1 family	K15342 cas1; CRISP-associated protein Cas1
D      Tfu_2131 DNA topoisomerase IV subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      Tfu_0007 DNA gyrase subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      Tfu_2134 DNA topoisomerase (ATP-hydrolyzing)	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      Tfu_0006 DNA gyrase subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      Tfu_2784 DNA topoisomerase I	K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D      Tfu_0628 Histone-like bacterial DNA-binding protein	K03530 hupB; DNA-binding protein HU-beta
D      Tfu_1096 DNA-directed DNA polymerase	K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D      Tfu_2152 peptidase S24, LexA repressor	K01356 lexA; repressor LexA [EC:3.4.21.88]
D      Tfu_0804 putative RecX protein	K03565 recX; regulatory protein
D      Tfu_2167 helicase c2:DEAD/DEAH box helicase, N-terminal	K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D      Tfu_0712 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal	K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D      Tfu_0061 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal	K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D      Tfu_0324 putative MutT family protein	K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D      Tfu_1200 conserved hypothetical protein	K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D      Tfu_2149 ribonucleotide reductase large subunit	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      Tfu_3001 ribonucleoside-diphosphate reductase	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      Tfu_3002 ribonucleoside-diphosphate reductase	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C    03029 Mitochondrial biogenesis [BR:tfu03029]
D      Tfu_0778 bacterial translation initiation factor 2 (bIF-2)	K02519 infB; translation initiation factor IF-2
D      Tfu_2066 bacterial translation initiation factor 3 (bIF-3)	K02520 infC; translation initiation factor IF-3
D      Tfu_0677 translation elongation factor Ts (EF-Ts)	K02357 tsf; elongation factor Ts
D      Tfu_2648 translation elongation factor 1A (EF-1A/EF-Tu)	K02358 tuf; elongation factor Tu
D      Tfu_2649 translation elongation factor 2 (EF-2/EF-G)	K02355 fusA; elongation factor G
D      Tfu_0848 Small GTP-binding protein domain	K03595 era; GTPase
D      Tfu_2043 tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      Tfu_2156 leucyl-tRNA synthetase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      Tfu_2086 aspartyl-tRNA synthetase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      Tfu_0861 glycyl-tRNA synthetase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      Tfu_0269 arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      Tfu_2426 similar to Arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      Tfu_0606 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      Tfu_0609 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      Tfu_0605 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      Tfu_0899 similar to V8-like Glu-specific endopeptidase	K01173 ENDOG; endonuclease G, mitochondrial
D      Tfu_3094 Single-strand binding protein	K03111 ssb; single-strand DNA-binding protein
D      Tfu_2039 hypothetical protein	K03111 ssb; single-strand DNA-binding protein
D      Tfu_0196 Heat shock protein Hsp70	K04043 dnaK; molecular chaperone DnaK
D      Tfu_0197 similar to Molecular chaperone GrpE (heat shock protein)	K03687 GRPE; molecular chaperone GrpE
D      Tfu_0228 chaperonin Cpn60/TCP-1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      Tfu_2598 chaperonin Cpn60/TCP-1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      Tfu_2599 10 kD chaperone	K04078 groES; chaperonin GroES
D      Tfu_0198 Heat shock protein DnaJ	K03686 dnaJ; molecular chaperone DnaJ
D      Tfu_0839 Heat shock protein DnaJ	K03686 dnaJ; molecular chaperone DnaJ
D      Tfu_0595 putative pyridoxal-phosphate-dependent aminotransferase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D      Tfu_0508 ATP-binding protein involved in chromosome partitioning	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      Tfu_2001 protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      Tfu_1995 putative integral membrane transport protein	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      Tfu_3114 putative membrane protein	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      Tfu_0185 preprotein translocase YidC subunit	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      Tfu_3080 similar to Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems	K07152 SCO1; protein SCO1
D      Tfu_1831 putative heat shock protein, hsp90-family	K04079 HSP90A; molecular chaperone HtpG
B
B  09183 Protein families: signaling and cellular processes
C    02000 Transporters [BR:tfu02000]
D      Tfu_2197 ABC-type multidrug transport system ATPase and permease components	K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D      Tfu_1157 ABC-type multidrug transport system ATPase and permease components	K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D      Tfu_0635 ABC transporter, ATP-binding protein	K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D      Tfu_0636 ABC transporter, ATP-binding protein	K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D      Tfu_0409 ABC transporter, ATP-binding subunit	K15738 uup; ABC transport system ATP-binding/permease protein
D      Tfu_1158 ABC-type multidrug transport system ATPase and permease components	K02021 ABC.MR; putative ABC transport system ATP-binding protein
D      Tfu_0328 molybdenum ABC transporter, periplasmic binding protein	K02020 modA; molybdate transport system substrate-binding protein
D      Tfu_0327 molybdate ABC transporter, inner membrane subunit	K02018 modB; molybdate transport system permease protein
D      Tfu_0326 ABC-type spermidine/putrescine transport systems ATPase components	K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D      Tfu_1504 extracellular solute-binding protein, family 3	K15551 tauA; taurine transport system substrate-binding protein
D      Tfu_1503 taurine ABC transporter, permease protein	K15552 tauC; taurine transport system permease protein
D      Tfu_1505 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component	K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D      Tfu_1304 similar to ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components	K15553 ssuA; sulfonate transport system substrate-binding protein
D      Tfu_1306 ABC transporter, permease component	K15554 ssuC; sulfonate transport system permease protein
D      Tfu_1305 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      Tfu_1309 putative transporter	K02012 afuA; iron(III) transport system substrate-binding protein
D      Tfu_1307 similar to ABC-type Fe3+ transport system permease component	K02011 afuB; iron(III) transport system permease protein
D      Tfu_1308 ABC-type spermidine/putrescine transport systems ATPase components	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      Tfu_0281 putative polyamine-binding lipoprotein	K11069 potD; spermidine/putrescine transport system substrate-binding protein
D      Tfu_0283 polyamine ABC-transporter, inner membrane subunit	K11070 potC; spermidine/putrescine transport system permease protein
D      Tfu_0282 polyamine ABC-transporter, inner membrane subunit	K11071 potB; spermidine/putrescine transport system permease protein
D      Tfu_0280 spermidine/putrescine ABC transporter ATP-binding subunit	K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D      Tfu_1434 possible solute binding protein of ABC transporter system	K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D      Tfu_2928 glycine betaine transport system permease protein	K02002 proX; glycine betaine/proline transport system substrate-binding protein
D      Tfu_2929 similar to ABC-type proline/glycine betaine transport system permease component	K02001 proW; glycine betaine/proline transport system permease protein
D      Tfu_2930 glycine betaine/L-proline transport ATP-binding subunit	K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D      Tfu_1692 putative ABC transporter membrane protein	K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D      Tfu_1691 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component	K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D      Tfu_1763 ABC-type sugar transport systems ATPase components	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      Tfu_0832 multiple sugar transport system substrate-binding protein	K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D      Tfu_0831 multiple sugar transport system permease protein	K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D      Tfu_0830 multiple sugar transport system permease protein	K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D      Tfu_2337 ABC-type glucosylglycerol transport system substrate-binding protein	K10232 aglE; alpha-glucoside transport system substrate-binding protein
D      Tfu_2338 ABC-type glucosylglycerol transport system permease protein	K10233 aglF; alpha-glucoside transport system permease protein
D      Tfu_2339 ABC-type glucosylglycerol transport system permease protein	K10234 aglG; alpha-glucoside transport system permease protein
D      Tfu_0934 putative solute binding lipoprotein	K10240 cebE; cellobiose transport system substrate-binding protein
D      Tfu_0935 multiple sugar transport system permease protein	K10241 cebF; cellobiose transport system permease protein
D      Tfu_0936 multiple sugar transport system permease protein	K10242 cebG; cellobiose transport system permease protein
D      Tfu_1609 ABC-type sugar transport system periplasmic component	K17318 lplA; putative aldouronate transport system substrate-binding protein
D      Tfu_1610 putative transport system integral membrane protein	K17319 lplB; putative aldouronate transport system permease protein
D      Tfu_1611 putative transport system integral membrane protein	K17320 lplC; putative aldouronate transport system permease protein
D      Tfu_1922 solute-binding protein	K10543 xylF; D-xylose transport system substrate-binding protein
D      Tfu_1920 putative ABC transporter transmembrane transport protein	K10544 xylH; D-xylose transport system permease protein
D      Tfu_1921 ABC-type sugar transport system ATPase component	K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D      Tfu_1619 putative sugar-binding lipoprotein	K17326 bxlE; xylobiose transport system substrate-binding protein
D      Tfu_1618 possible binding-protein-dependent transport protein	K17327 bxlF; xylobiose transport system permease protein
D      Tfu_1617 putative binding-protein-dependent transport protein	K17328 bxlG; xylobiose transport system permease protein
D      Tfu_1702 sugar-binding protein	K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein
D      Tfu_1704 putative transport system permease ABC transporter protein	K25677 yesP; pectin-derived oligosaccharide transport system permease protein
D      Tfu_1703 putative transport system permease ABC transporter protein	K25678 yesQ; pectin-derived oligosaccharide transport system permease protein
D      Tfu_0753 putative ABC transporter periplasmic substrate-binding protein	K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D      Tfu_1636 Periplasmic phosphate binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      Tfu_2740 Periplasmic phosphate binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      Tfu_2741 phosphate ABC transporter, permease protein PstC	K02037 pstC; phosphate transport system permease protein
D      Tfu_2742 Phosphate transport system permease protein 2	K02038 pstA; phosphate transport system permease protein
D      Tfu_2743 Phosphate transport system permease protein 1	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      Tfu_0809 extracellular solute-binding protein, family 3	K10005 gluB; glutamate transport system substrate-binding protein
D      Tfu_0808 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	K10006 gluC; glutamate transport system permease protein
D      Tfu_0807 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine	K10007 gluD; glutamate transport system permease protein
D      Tfu_0810 ABC-type polar amino acid transport system ATPase component	K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D      Tfu_1186 branched-chain amino acid transport system substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Tfu_0074 ABC branched-chain amino acid transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Tfu_1290 similar to ABC-type branched-chain amino acid transport systems periplasmic component	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Tfu_1779 conserved hypothetical protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Tfu_0077 branched-chain amino acid ABC transporter permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      Tfu_1291 probable amino-acid transmembrane lipoprotein ABC transporter	K01997 livH; branched-chain amino acid transport system permease protein
D      Tfu_1781 possible ABC transporter, permease protein	K01997 livH; branched-chain amino acid transport system permease protein
D      Tfu_1182 branched-chain amino acid ABC-type transport system permease components	K01997 livH; branched-chain amino acid transport system permease protein
D      Tfu_1780 ABC transporter permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      Tfu_0078 branched-chain amino acid ABC transporter permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      Tfu_1292 similar to ABC-type branched-chain amino acid transport system permease component	K01998 livM; branched-chain amino acid transport system permease protein
D      Tfu_1183 branched-chain amino acid transport system permease protein	K01998 livM; branched-chain amino acid transport system permease protein
D      Tfu_1293 ABC-type branched-chain amino acid transport systems ATPase component	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Tfu_0075 ABC-type branched-chain amino acid transport systems ATPase component	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1783 ABC-type branched-chain amino acid transport systems ATPase component	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1184 branched-chain amino acid transport system ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1185 ABC-type branched-chain amino acid transport systems ATPase component	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Tfu_0076 ABC-type branched-chain amino acid transport systems ATPase component	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1782 ABC-type branched-chain amino acid transport systems ATPase component	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Tfu_1294 ABC-type branched-chain amino acid transport systems ATPase component	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Tfu_0933 ABC transport system substrate-binding protein	K02073 metQ; D-methionine transport system substrate-binding protein
D      Tfu_0932 putative ABC transporter permease protein	K02072 metI; D-methionine transport system permease protein
D      Tfu_0931 ABC-type metal ion transport system ATPase component	K02071 metN; D-methionine transport system ATP-binding protein
D      Tfu_0303 bacterial extracellular solute-binding	K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D      Tfu_0304 amino acid ABC transporter, inner membrane subunit	K02029 ABC.PA.P; polar amino acid transport system permease protein
D      Tfu_0305 amino acid ABC transporter, inner membrane subunit	K02029 ABC.PA.P; polar amino acid transport system permease protein
D      Tfu_0306 ABC-type polar amino acid transport system ATPase component	K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D      Tfu_0818 peptide/nickel transport system substrate-binding protein	K13889 gsiB; glutathione transport system substrate-binding protein
D      Tfu_1633 putative solute-binding dependent transport lipoprotein	K13889 gsiB; glutathione transport system substrate-binding protein
D      Tfu_1632 putative ABC transporter permease	K13890 gsiC; glutathione transport system permease protein
D      Tfu_0817 ABC peptide/nickel transport system permease protein	K13890 gsiC; glutathione transport system permease protein
D      Tfu_2292 putative peptide ABC transporter permease protein	K13891 gsiD; glutathione transport system permease protein
D      Tfu_1631 ABC transporter, permease protein	K13891 gsiD; glutathione transport system permease protein
D      Tfu_1630 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal	K13892 gsiA; glutathione transport system ATP-binding protein
D      Tfu_2291 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal	K13892 gsiA; glutathione transport system ATP-binding protein
D      Tfu_0910 ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Tfu_1821 putative peptide transport system substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Tfu_0911 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Tfu_1820 putative peptide transport system permease protein	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Tfu_1822 oligopeptide transport integral membrane protein	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Tfu_0912 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Tfu_1819 ATPase components of various ABC-type transport systems contain duplicated ATPase	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Tfu_0913 oligopeptide/dipeptide ABC transporter, ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Tfu_2386 binding-protein-dependent transport lipoprotein	K25132 hmuT; heme transport system substrate-binding protein
D      Tfu_2385 FecCD-family membrane transport protein	K25133 hmuU; heme transport system permease protein
D      Tfu_2384 ABC-type hemin transport system ATPase component	K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D      Tfu_1491 putative ABC transporter, periplasmic iron-siderophore binding protein	K25286 fagD; iron-siderophore transport system substrate-binding protein
D      Tfu_1864 similar to iron(III) dicitrate transport permease; RBL00804	K25286 fagD; iron-siderophore transport system substrate-binding protein
D      Tfu_0338 ABC-type Fe3+-siderophore transport system inner membrane subunit	K23186 fepD; iron-siderophore transport system permease protein
D      Tfu_1492 putative ferrichrome transport system permease protein	K23186 fepD; iron-siderophore transport system permease protein
D      Tfu_0337 ABC-type enterobactin transport system inner membrane subunit	K23187 fepG; iron-siderophore transport system permease protein
D      Tfu_1493 putative ferrichrome transport system permease protein	K23187 fepG; iron-siderophore transport system permease protein
D      Tfu_0336 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components	K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D      Tfu_1494 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components	K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D      Tfu_0139 ABC transporter, ATP-binding protein	K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D      Tfu_0656 ABC Fe3+-hydroxamate transporter substrate-binding protein	K25034 btuF; cobalamin transport system substrate-binding protein
D      Tfu_0657 ABC-type transporter, permease component	K25027 btuC; cobalamin transport system permease protein
D      Tfu_1663 putative ABC transporter substrate-binding protein	K11601 mntC; manganese transport system substrate-binding protein
D      Tfu_1661 putative ABC transporter membrane protein	K11602 mntB; manganese transport system permease protein
D      Tfu_1662 ABC-type Mn/Zn transport systems ATPase component	K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D      Tfu_2304 putative ABC-transporter metal-binding lipoprotein	K09815 znuA; zinc transport system substrate-binding protein
D      Tfu_0857 ABC zinc/manganese transport system permease protein	K09816 znuB; zinc transport system permease protein
D      Tfu_0858 ABC-type Mn/Zn transport systems ATPase component	K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D      Tfu_2314 similar to Uncharacterized conserved protein	K03523 bioY; biotin transport system substrate-specific component
D      Tfu_2312 putative cobalt transport system permease protein	K16783 bioN; biotin transport system permease protein
D      Tfu_2313 ABC-type cobalt transport system ATPase component	K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D      Tfu_0589 ABC-type cobalt transport system	K16785 ecfT; energy-coupling factor transport system permease protein
D      Tfu_0588 ATPase	K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D      Tfu_0587 ABC transporter, permease protein	K16925 ykoE; energy-coupling factor transport system permease protein
D      Tfu_0462 nodulation protein J	K09694 nodJ; lipooligosaccharide transport system permease protein
D      Tfu_0461 ABC-type multidrug transport system ATPase component	K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D      Tfu_2477 cell division protein FtsX	K09811 ftsX; cell division transport system permease protein
D      Tfu_2478 cell division ATP-binding protein FtsE	K09812 ftsE; cell division transport system ATP-binding protein
D      Tfu_0290 putative integral membrane protein	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      Tfu_1448 putative ABC transporter transmembrane protein	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      Tfu_1990 putative integral membrane transport protein	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      Tfu_2538 lipopolysaccharide exporter	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      Tfu_1435 putative integral membrane protein	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      Tfu_0291 ABC-type multidrug transport system ATPase component	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      Tfu_1447 ABC-type multidrug transport system ATPase component	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      Tfu_1989 ABC-type multidrug transport system ATPase componen	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      Tfu_2537 ABC-type polysaccharide/polyol phosphate transport system ATPase component	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      Tfu_1436 ABC-type multidrug transport system ATPase component	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      Tfu_1848 putative ABC transporter integral membrane protein	K02004 ABC.CD.P; putative ABC transport system permease protein
D      Tfu_1847 ABC-type antimicrobial peptide transport system ATPase component	K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D      Tfu_0812 ABC-type antimicrobial peptide transport system ATPase component	K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D      Tfu_1984 Iron-regulated ABC transporter ATPase subunit SufC	K09013 sufC; Fe-S cluster assembly ATP-binding protein
D      Tfu_3091 Multi antimicrobial extrusion protein MatE	K26937 dinF; MATE family, multidrug efflux pump
D      Tfu_1668 sugar transporter	K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D      Tfu_1375 putative integral membrane transporter	K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D      Tfu_1861 probable POT family transport protein	K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter
D      Tfu_1734 drug resistance transporter Bcr/CflA subfamily	K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D      Tfu_1728 drug resistance transporter Bcr/CflA subfamily	K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D      Tfu_1758 putative transporter	K06902 UMF1; MFS transporter, UMF1 family
D      Tfu_2765 phosphoenolpyruvate--protein phosphotransferase	K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D      Tfu_2487 phosphoryl transfer system, HPr	K02784 ptsH; phosphocarrier protein HPr
D      Tfu_2489 putative phosphoenolpyruvate-dependent sugar phosphotransferase	K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D      Tfu_0383 hypothetical protein	K08714 VGSC; voltage-gated sodium channel
D      Tfu_0659 ammonium transporter	K03320 amt; ammonium transporter, Amt family
D      Tfu_1678 von Willebrand factor, type A	K07114 yfbK; Ca-activated chloride channel homolog
D      Tfu_2441 von Willebrand factor, type A	K07114 yfbK; Ca-activated chloride channel homolog
D      Tfu_2199 divalent cation transporter	K06213 mgtE; magnesium transporter
D      Tfu_1428 Magnesium and cobalt transport protein CorA	K03284 corA; magnesium transporter
D      Tfu_3029 camphor resistance protein CrcB	K06199 crcB; fluoride exporter
D      Tfu_3030 camphor resistance protein CrcB	K06199 crcB; fluoride exporter
D      Tfu_1263 CBS	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      Tfu_1686 CBS	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      Tfu_0846 CBS domain protein	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      Tfu_1685 CBS	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      Tfu_1564 similar to Outer membrane protein and related peptidoglycan-associated (lipo)proteins	K03286 TC.OOP; OmpA-OmpF porin, OOP family
D      Tfu_2300 Cation efflux protein	K16264 czcD; cobalt-zinc-cadmium efflux system protein
D      Tfu_2504 putative integral membrane protein	K07238 TC.ZIP; zinc transporter, ZIP family
D      Tfu_0987 small multidrug resistance protein, SMR family	K03297 emrE; small multidrug resistance pump
D      Tfu_1261 small multidrug resistance protein, SMR family	K11741 sugE; quaternary ammonium compound-resistance protein SugE
D      Tfu_0769 membrane protein, putative	K03298 TC.DME; drug/metabolite transporter, DME family
D      Tfu_1994 putative integral membrane protein	K11939 rhtA; inner membrane transporter RhtA
D      Tfu_1425 putative integral membrane protein	K11939 rhtA; inner membrane transporter RhtA
D      Tfu_2679 RarD protein	K05786 rarD; chloramphenicol-sensitive protein RarD
D      Tfu_2862 Na+/solute symporter	K14393 actP; cation/acetate symporter
D      Tfu_2860 putative transmembrane transport protein	K14393 actP; cation/acetate symporter
D      Tfu_2301 Na+/H+ antiporter NhaA	K03313 nhaA; Na+:H+ antiporter, NhaA family
D      Tfu_2302 putative cation transporter	K03498 trkH; trk/ktr system potassium uptake protein
D      Tfu_1928 putative potassium transporter	K03499 trkA; trk/ktr system potassium uptake protein
D      Tfu_1929 putative potassium uptake protein	K03499 trkA; trk/ktr system potassium uptake protein
D      Tfu_2303 putative cation transporter	K03499 trkA; trk/ktr system potassium uptake protein
D      Tfu_0240 putative xanthine/uracil permease	K06901 pbuG; adenine/guanine/hypoxanthine permease
D      Tfu_0873 sulfate permease, SulP family	K03321 TC.SULP; sulfate permease, SulP family
D      Tfu_1477 TrapT family, DctM subunit, C4-dicarboxylate transport	K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D      Tfu_1391 arsenite-transporting ATPase	K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D      Tfu_1555 Arsenical-resistance protein ACR3	K03325 ACR3; arsenite transporter
D      Tfu_1569 arsenite efflux pump	K03325 ACR3; arsenite transporter
D      Tfu_0350 NADH dehydrogenase (quinone)	K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D      Tfu_0349 similar to Multisubunit Na+/H+ antiporter MnhC subunit	K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D      Tfu_0348 NADH dehydrogenase (quinone)	K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D      Tfu_0347 putative integral membrane protein	K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D      Tfu_0346 putative cation antiporter subunit	K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D      Tfu_0345 Na+/H+ antiporter subunit	K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D      Tfu_3104 virulence factor MVIN-like	K03980 murJ; putative peptidoglycan lipid II flippase
D      Tfu_2027 similar to Uncharacterized membrane protein putative virulence factor	K03980 murJ; putative peptidoglycan lipid II flippase
D      Tfu_1138 putative membrane protein	K26605 azlC; branched chain amino acid efflux pump
D      Tfu_1137 putative membrane protein	K26606 azlD; branched chain amino acid efflux pump
D      Tfu_1714 conserved hypothetical protein	K07793 tctA; putative tricarboxylic transport membrane protein
D      Tfu_1712 conserved hypothetical protein	K07795 tctC; putative tricarboxylic transport membrane protein
D      Tfu_1689 conserved hypothetical protein	K22736 VIT; vacuolar iron transporter family protein
D      Tfu_0525 conserved hypothetical protein	K22736 VIT; vacuolar iron transporter family protein
D      Tfu_1109 cell division protein FtsW	K03588 ftsW; cell division protein FtsW
D      Tfu_2663 conserved hypothetical protein	K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D      Tfu_1370 membrane protein, putative	K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D      Tfu_0134 inorganic H+ pyrophosphatase	K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D      Tfu_2703 putative cytochrome C biogenesis membrane protein	K06196 ccdA; cytochrome c-type biogenesis protein
D      Tfu_0340 trimethylamine-N-oxide reductase (cytochrome c)	K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D      Tfu_1079 nicotinamide mononucleotide transporter PnuC	K03811 pnuC; nicotinamide mononucleotide transporter
D      Tfu_2521 conserved hypothetical protein	K20468 K20468; putative heme transporter
D      Tfu_1344 conserved hypothetical protein	K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D      Tfu_0298 similar to Cu resistance protein CopC	K07156 copC; copper resistance protein C
C    02044 Secretion system [BR:tfu02044]
D      Tfu_1089 hypothetical protein	K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D      Tfu_2271 hypothetical protein	K02279 cpaB; pilus assembly protein CpaB
D      Tfu_0369 conserved hypothetical protein	K02279 cpaB; pilus assembly protein CpaB
D      Tfu_2272 putative septum site-determining protein	K02282 cpaE; pilus assembly protein CpaE
D      Tfu_2274 putative secretory protein	K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D      Tfu_0128 pilus assembly protein CpaF	K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D      Tfu_2275 putative integral membrane protein	K12510 tadB; tight adherence protein B
D      Tfu_0127 putative integral membrane protein	K12510 tadB; tight adherence protein B
D      Tfu_2276 putative integral membrane protein	K12511 tadC; tight adherence protein C
D      Tfu_1117 conserved hypothetical protein	K02221 yggT; YggT family protein
D      Tfu_0826 helix-hairpin-helix DNA-binding, class 1	K02237 comEA; competence protein ComEA
D      Tfu_0825 ComEC/Rec2-related protein	K02238 comEC; competence protein ComEC
D      Tfu_2490 protein translocase subunit secA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      Tfu_0761 protein translocase subunit secA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      Tfu_0387 protein translocase subunit secD / protein translocase subunit secF	K12257 secDF; SecD/SecF fusion protein
D      Tfu_2660 protein translocase subunit secE/sec61 gamma	K03073 secE; preprotein translocase subunit SecE
D      Tfu_2014 preprotein translocase SecG subunit	K03075 secG; preprotein translocase subunit SecG
D      Tfu_2626 protein translocase subunit secY/sec61 alpha	K03076 secY; preprotein translocase subunit SecY
D      Tfu_0661 signal recognition particle subunit FFH/SRP54 (srp54)	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      Tfu_0658 signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      Tfu_2092 protein translocase subunit yajC	K03210 yajC; preprotein translocase subunit YajC
D      Tfu_3114 putative membrane protein	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      Tfu_0185 preprotein translocase YidC subunit	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      Tfu_1769 Twin-arginine translocation protein TatA/E	K03116 tatA; sec-independent protein translocase protein TatA
D      Tfu_0381 sec-independent protein translocase protein TatB	K03117 tatB; sec-independent protein translocase protein TatB
D      Tfu_1768 Sec-independent protein translocase TatC	K03118 tatC; sec-independent protein translocase protein TatC
C    02042 Bacterial toxins [BR:tfu02042]
D      Tfu_1263 CBS	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      Tfu_1686 CBS	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      Tfu_0846 CBS domain protein	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      Tfu_1685 CBS	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      Tfu_0862 HylII	K11068 hlyIII; hemolysin III
C    02022 Two-component system [BR:tfu02022]
D      Tfu_2909 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal	K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D      Tfu_2910 response regulator receiver	K07776 regX3; two-component system, OmpR family, response regulator RegX3
D      Tfu_0344 signal transduction histidine kinase	K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D      Tfu_0343 response regulator receiver	K07669 mprA; two-component system, OmpR family, response regulator MprA
D      Tfu_2495 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal	K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D      Tfu_2496 response regulator receiver	K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D      Tfu_0256 signal transduction histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      Tfu_1329 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      Tfu_0257 response regulator receiver	K02483 K02483; two-component system, OmpR family, response regulator
D      Tfu_2959 regulatory protein, LuxR:Response regulator receiver	K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D      Tfu_0289 putative two-component system sensor kinase	K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D      Tfu_0288 regulatory protein, LuxR:Response regulator receiver	K07693 desR; two-component system, NarL family, response regulator DesR
D      Tfu_3046 GAF:ATP-binding region, ATPase-like	K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D      Tfu_2950 regulatory protein, LuxR:Response regulator receiver	K07695 devR; two-component system, NarL family, response regulator DevR
D      Tfu_3035 regulatory protein, LuxR:Response regulator receiver	K07695 devR; two-component system, NarL family, response regulator DevR
D      Tfu_2857 ATP-binding region, ATPase-like	K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D      Tfu_0555 signal transduction histidine kinase	K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D      Tfu_1181 response regulator receiver	K22010 pdtaR; two-component system, response regulator PdtaR
C    02035 Bacterial motility proteins [BR:tfu02035]
D      Tfu_1089 hypothetical protein	K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D      Tfu_2271 hypothetical protein	K02279 cpaB; pilus assembly protein CpaB
D      Tfu_0369 conserved hypothetical protein	K02279 cpaB; pilus assembly protein CpaB
D      Tfu_2272 putative septum site-determining protein	K02282 cpaE; pilus assembly protein CpaE
D      Tfu_2274 putative secretory protein	K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D      Tfu_0128 pilus assembly protein CpaF	K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C    03037 Cilium and associated proteins
C    04812 Cytoskeleton proteins [BR:tfu04812]
D      Tfu_1113 cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      Tfu_3111 chromosome segregation ATPase	K03496 parA; chromosome partitioning protein
D      Tfu_1202 putative partitioning or sporulation protein	K03496 parA; chromosome partitioning protein
D      Tfu_3110 chromosome segregation DNA-binding protein	K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C    04147 Exosome [BR:tfu04147]
D      Tfu_1831 putative heat shock protein, hsp90-family	K04079 HSP90A; molecular chaperone HtpG
D      Tfu_0428 enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Tfu_2017 glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      Tfu_2016 phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      Tfu_1179 pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      Tfu_2820 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      Tfu_3069 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      Tfu_0228 chaperonin Cpn60/TCP-1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      Tfu_2598 chaperonin Cpn60/TCP-1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D      Tfu_0196 Heat shock protein Hsp70	K04043 dnaK; molecular chaperone DnaK
D      Tfu_2004 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      Tfu_0485 putative peptidase	K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D      Tfu_2595 IMP dehydrogenase related 2	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      Tfu_2596 inosine-5'-monophosphate dehydrogenase	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      Tfu_2648 translation elongation factor 1A (EF-1A/EF-Tu)	K02358 tuf; elongation factor Tu
D      Tfu_0843 putative protein kinase C inhibitor (HIT family	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      Tfu_1998 putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_1031 long-chain fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_2158 putative long-chain-fatty-acid-CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_1733 putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Tfu_0253 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_0436 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2394 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_1520 thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Tfu_2505 adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      Tfu_2625 Adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      Tfu_2091 adenine phosphoribosyltransferase	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      Tfu_2051 argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      Tfu_2052 argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      Tfu_2566 galactokinase	K00849 galK; galactokinase [EC:2.7.1.6]
D      Tfu_0582 1,4-alpha-glucan branching enzyme	K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D      Tfu_0787 glycerol kinase	K00864 glpK; glycerol kinase [EC:2.7.1.30]
D      Tfu_0982 L-glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Tfu_0988 L-glutamine synthetase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Tfu_2730 porphobilinogen synthase	K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D      Tfu_1547 pterin-4-alpha-carbinolamine dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      Tfu_0614 D-3-phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Tfu_2572 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase	K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D      Tfu_0994 dihydrolipoamide dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Tfu_0594 electron transfer flavoprotein, alpha subunit	K03522 fixB; electron transfer flavoprotein alpha subunit
D      Tfu_2005 glucose-6-phosphate 1-dehydrogenase	K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D      Tfu_2015 triosephosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      Tfu_2911 phosphoglycerate mutase	K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C    02048 Prokaryotic defense system [BR:tfu02048]
D      Tfu_1587 CRISPR-associated protein, Cas1 family	K15342 cas1; CRISP-associated protein Cas1
D      Tfu_1601 CRISPR-associated helicase, Cas3 family	K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D      Tfu_1593 CRISPR-associated helicase, Cas3 family	K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D      Tfu_1600 CRISPR-associated protein, Cse1 family	K19123 casA; CRISPR system Cascade subunit CasA
D      Tfu_1592 CRISPR-associated protein, Cse1 family	K19123 casA; CRISPR system Cascade subunit CasA
D      Tfu_1591 conserved hypothetical protein	K19046 casB; CRISPR system Cascade subunit CasB
D      Tfu_1599 CRISPR-associated protein, Cse2 family	K19046 casB; CRISPR system Cascade subunit CasB
D      Tfu_1598 CRISPR-associated protein, Cse4 family	K19124 casC; CRISPR system Cascade subunit CasC
D      Tfu_1590 CRISPR-associated protein, Cse4 family	K19124 casC; CRISPR system Cascade subunit CasC
D      Tfu_1597 CRISPR-associated protein, Cas5e family	K19125 casD; CRISPR system Cascade subunit CasD
D      Tfu_1589 CRISPR-associated protein, Cas5e family	K19125 casD; CRISPR system Cascade subunit CasD
D      Tfu_1588 CRISPR-associated protein, Cse3 family	K19126 casE; CRISPR system Cascade subunit CasE
D      Tfu_1596 CRISPR-associated protein, Cse3 family	K19126 casE; CRISPR system Cascade subunit CasE
D      Tfu_1583 CRISPR-associated protein, Cmr1 family	K07061 cmr1; CRISPR-associated protein Cmr1
D      Tfu_1578 CRISPR-associated protein, Cmr2 family	K19076 cmr2; CRISPR-associated protein Cmr2
D      Tfu_1579 similar to Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)	K09127 cmr3; CRISPR-associated protein Cmr3
D      Tfu_1580 CRISPR-associated protein, Cmr4 family	K09000 cmr4; CRISPR-associated protein Cmr4
D      Tfu_1581 hypothetical protein	K19141 cmr5; CRISPR-associated protein Cmr5
D      Tfu_1582 CRISPR-associated protein, Cmr6 family	K19142 cmr6; CRISPR-associated protein Cmr6
D      Tfu_2855 similar to Putative stress-responsive transcriptional regulator	K03973 pspC; phage shock protein C
D      Tfu_1113 cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      Tfu_0623 glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      Tfu_0595 putative pyridoxal-phosphate-dependent aminotransferase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C    04030 G protein-coupled receptors
C    04050 Cytokine receptors [BR:tfu04050]
C    04054 Pattern recognition receptors
C    03310 Nuclear receptors
C    04040 Ion channels
C    04031 GTP-binding proteins
C    04052 Cytokines and neuropeptides
C    04515 Cell adhesion molecules
C    04090 CD molecules [BR:tfu04090]
D      Tfu_0485 putative peptidase	K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C    01504 Antimicrobial resistance genes [BR:tfu01504]
D      Tfu_2429 similar to Streptomycin 6-kinase	K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D      Tfu_2841 putative rifampin monooxygenase	K21267 iri; rifampicin monooxygenase [EC:1.14.13.211]
D      Tfu_2917 integral membrane protein	K02172 blaR1; bla regulator protein blaR1
D      Tfu_2916 similar to transcriptional regulator	K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D      Tfu_0368 hypothetical protein	K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D      Tfu_0734 regulatory protein, MerR	K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D      Tfu_1511 regulatory protein, MerR	K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C    00535 Proteoglycans
C    00536 Glycosaminoglycan binding proteins
C    00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C    04091 Lectins
C    04990 Domain-containing proteins not elsewhere classified
B
B  09185 Viral protein families
C    03200 Viral proteins
C    03210 Viral fusion proteins
B
B  09184 RNA family
C    03100 Non-coding RNAs [BR:tfu03100]
D      Tfu_R0033 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Tfu_R0034 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Tfu_R0009 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Tfu_R0064 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Tfu_R0061 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Tfu_R0037 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Tfu_R0045 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Tfu_R0008 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Tfu_R0017 tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      Tfu_R0057 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      Tfu_R0031 tRNA-Cys	K14222 tRNA-Cys; tRNA Cys
D      Tfu_R0014 tRNA-Gln	K14223 tRNA-Gln; tRNA Gln
D      Tfu_R0010 tRNA-Gln	K14223 tRNA-Gln; tRNA Gln
D      Tfu_R0058 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      Tfu_R0016 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      Tfu_R0015 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      Tfu_R0027 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Tfu_R0030 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Tfu_R0028 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Tfu_R0036 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Tfu_R0060 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Tfu_R0038 tRNA-His	K14226 tRNA-His; tRNA His
D      Tfu_R0001 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      Tfu_R0019 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Tfu_R0055 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Tfu_R0063 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Tfu_R0041 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Tfu_R0011 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Tfu_R0039 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      Tfu_R0040 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      Tfu_R0059 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      Tfu_R0051 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Tfu_R0012 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Tfu_R0013 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Tfu_R0018 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Tfu_R0056 tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
D      Tfu_R0006 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      Tfu_R0020 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      Tfu_R0035 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      Tfu_R0004 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Tfu_R0002 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Tfu_R0062 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Tfu_R0005 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Tfu_R0052 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      Tfu_R0007 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      Tfu_R0054 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      Tfu_R0050 tRNA-Trp	K14235 tRNA-Trp; tRNA Trp
D      Tfu_R0053 tRNA-Tyr	K14236 tRNA-Tyr; tRNA Tyr
D      Tfu_R0026 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Tfu_R0029 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Tfu_R0032 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Tfu_R0022 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Tfu_R0025 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Tfu_R0044 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Tfu_R0067 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Tfu_R0049 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Tfu_R0043 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      Tfu_R0066 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      Tfu_R0048 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      Tfu_R0024 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      Tfu_R0023 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      Tfu_R0042 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      Tfu_R0047 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      Tfu_R0065 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      Tfu_R0003 SRP RNA; RNA component of signal recognitionparticle	K01983 ffs; SRP RNA
D      Tfu_R0021 RNA component of RNaseP	K01978 rnpB; M1 RNA
D      Tfu_R0046 Tfu_R0046	K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B  09191 Unclassified: metabolism
C    99980 Enzymes with EC numbers
D      Tfu_2462 putative short chain dehydrogenase	K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D      Tfu_1687 2,5-didehydrogluconate reductase	K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D      Tfu_2293 oxidoreductase	K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D      Tfu_1946 FAD-linked oxidoreductase	K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-]
D      Tfu_2461 putative oxidoreductase	K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D      Tfu_2586 carbon monoxide dehydrogenase	K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D      Tfu_2587 molybdopterin dehydrogenase	K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D      Tfu_2696 geranylgeranyl reductase, plantal and prokaryotic	K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D      Tfu_2980 (S)-2-hydroxy-acid oxidase	K24693 mftD; pre-mycofactocin synthase [EC:1.4.3.26]
D      Tfu_3027 reduced coenzyme F420:NADP oxidoreductase	K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D      Tfu_0970 reduced coenzyme F420:NADP oxidoreductase	K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D      Tfu_2559 dihydrolipoamide dehydrogenase	K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D      Tfu_0360 putative oxidoreductase	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      Tfu_2228 putative quinone oxidoreductase	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      Tfu_2678 methionine sulfoxide reductase A	K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D      Tfu_1893 methionine sulfoxide reductase B	K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D      Tfu_2995 conserved hypothetical protein	K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D      Tfu_0886 catalase	K07217 ydbD; manganese catalase [EC:1.11.1.6]
D      Tfu_1653 chloride peroxidase	K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D      Tfu_3078 dyp-type peroxidase	K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D      Tfu_2360 bacterioferritin comigratory protein	K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D      Tfu_0697 putative ATP/GTP binding protein	K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D      Tfu_1964 putative thiol-specific antioxidant protein	K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29]
D      Tfu_0423 flavohemoprotein	K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D      Tfu_1490 putative monooxygenase	K18229 PAMO; phenylacetone monooxygenase [EC:1.14.13.92]
D      Tfu_1869 putative peptide monooxygenase	K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196]
D      Tfu_1268 putative secreted cellulose-binding protein	K22033 K22033; lytic cellulose monooxygenase (C4-dehydrogenating) [EC:1.14.99.56]
D      Tfu_0619 conserved hypothetical protein	K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57]
D      Tfu_1915 ferredoxin/ferredoxin--NADP reductase, putative	K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D      Tfu_1521 similar to Arsenate reductase and related proteins glutaredoxin family	K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D      Tfu_0529 Glutaredoxin-like protein GlrX	K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D      Tfu_2160 putative cyclopropane fatty acid synthase	K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D      Tfu_0569 conserved hypothetical protein	K24288 meT1; MMP 1-O-methyltransferase [EC:2.1.1.365]
D      Tfu_1260 maltose O-acetyltransferase	K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D      Tfu_2739 putative acetyltransferase	K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D      Tfu_1762 Apolipoprotein N-acyltransferase	K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D      Tfu_2913 putative glycosyltransferase	K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D      Tfu_1716 glycerone kinase	K20902 derK; D-erythrulose 4-kinase [EC:2.7.1.210]
D      Tfu_2336 conserved hypothetical protein	K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D      Tfu_0986 glutamate-ammonia-ligase adenylyltransferase	K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D      Tfu_0882 triacylglycerol lipase	K27357 tfH; cutinase [EC:3.1.1.74]
D      Tfu_0883 triacylglycerol lipase	K27357 tfH; cutinase [EC:3.1.1.74]
D      Tfu_2427 putative carboxylesterase	K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D      Tfu_0552 Thioesterase superfamily	K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D      Tfu_2213 conserved hypothetical protein	K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D      Tfu_1451 similar to Protein tyrosine/serine phosphatase	K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D      Tfu_2169 putative phosphoglycerate mutase	K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D      Tfu_0511 phosphoesterase PHP, N-terminal	K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D      Tfu_0135 conserved hypothetical protein	K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D      Tfu_0398 TatD-related deoxyribonuclease	K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D      Tfu_2401 conserved hypothetical protein	K07503 nucS; endonuclease [EC:3.1.-.-]
D      Tfu_2923 xylanase. Glycosyl Hydrolase family 10	K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D      Tfu_2791 xylanase. Glycosyl Hydrolase family 10	K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D      Tfu_1213 xylanase. Glycosyl Hydrolase family 11	K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D      Tfu_1612 cellulose-binding, family II, bacterial type	K18578 CEL74A; xyloglucan-specific exo-beta-1,4-glucanase [EC:3.2.1.155]
D      Tfu_1613 putative alpha-glucosidase	K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D      Tfu_1750 conserved hypothetical protein	K23086 ggH; glucosylglycerate hydrolase [EC:3.2.1.208]
D      Tfu_0571 conserved hypothetical protein	K27194 mmpH; MMP endo-(1,4)-3-O-methyl-alpha-D-mannosidase [EC:3.2.1.221]
D      Tfu_2433 peptide deformylase	K01462 PDF; peptide deformylase [EC:3.5.1.88]
D      Tfu_1726 peptide deformylase	K01462 PDF; peptide deformylase [EC:3.5.1.88]
D      Tfu_0486 conserved hypothetical protein	K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D      Tfu_1621 similar to xylanase/chitin deacetylase	K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D      Tfu_2788 cellulose-binding, family II, bacterial type	K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D      Tfu_0449 conserved hypothetical protein	K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D      Tfu_0689 putative hydrolase	K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D      Tfu_0168 conserved hypothetical protein, possibly membrane-associated	K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D      Tfu_0673 conserved hypothetical protein	K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D      Tfu_2500 ATPase	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      Tfu_1100 putative regulatory protein	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      Tfu_1676 MoxR-like ATPases	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      Tfu_0222 conserved hypothetical protein	K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D      Tfu_2608 Protein of unknown function UPF0031:YjeF-related protein, N-terminal	K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D      Tfu_2009 cellulose-binding, family II, bacterial type	K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D      Tfu_2285 similar to FKBP-type peptidyl-prolyl cis-trans isomerases 1	K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D      Tfu_1736 conserved hypothetical protein	K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D      Tfu_2811 methylmalonyl-CoA mutase, N-terminal	K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D      Tfu_2248 putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase	K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42]
D      Tfu_1300 DitJ-like CoA ligase (AMP forming), possibly related to diterpenoid metabolism	K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D      Tfu_1832 cysteinyl-tRNA synthetase	K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D      Tfu_1834 ATPase, E1-E2 type	K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C    99981 Carbohydrate metabolism
D      Tfu_2707 putative acetoin utilization protein	K04768 acuC; acetoin utilization protein AcuC
C    99982 Energy metabolism
D      Tfu_1624 formate dehydrogenase, subunit FdhD	K02379 fdhD; FdhD protein
D      Tfu_1226 hypothetical protein	K05337 fer; ferredoxin
D      Tfu_1275 conserved hypothetical protein	K05337 fer; ferredoxin
D      Tfu_1479 putative ferredoxin	K05337 fer; ferredoxin
D      Tfu_1982 SUF system FeS assembly protein	K04488 iscU; nitrogen fixation protein NifU and related proteins
D      Tfu_0593 electron transfer flavoprotein, beta subunit	K03521 fixA; electron transfer flavoprotein beta subunit
C    99983 Lipid metabolism
C    99984 Nucleotide metabolism
C    99985 Amino acid metabolism
D      Tfu_0634 putative integral membrane protein	K06203 cysZ; CysZ protein
D      Tfu_0908 hypothetical protein	K08234 yaeR; glyoxylase I family protein
D      Tfu_1115 Protein of unknown function UPF0001	K06997 yggS; PLP dependent protein
C    99986 Glycan metabolism
D      Tfu_1576 Conserved hypothetical protein 374	K07027 K07027; glycosyltransferase 2 family protein
C    99987 Cofactor metabolism
C    99988 Secondary metabolism
C    99999 Others
D      Tfu_0104 putative integral membrane protein	K15977 K15977; putative oxidoreductase
B
B  09192 Unclassified: genetic information processing
C    99973 Transcription
D      Tfu_0234 cold-shock DNA-binding protein family	K03704 cspA; cold shock protein
D      Tfu_0384 cold-shock DNA-binding protein family	K03704 cspA; cold shock protein
D      Tfu_0100 RNA binding S1:Resolvase, RNase H-like fold	K06959 tex; protein Tex
C    99974 Translation
C    99975 Protein processing
D      Tfu_2372 conserved hypothetical protein	K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D      Tfu_2195 trigger factor	K03545 tig; trigger factor
D      Tfu_2476 SsrA-binding protein	K03664 smpB; SsrA-binding protein
D      Tfu_0670 Mg chelatase-related protein	K07391 comM; magnesium chelatase family protein
D      Tfu_2702 putative integral membrane protein	K07399 resB; cytochrome c biogenesis protein
C    99976 Replication and repair
D      Tfu_0669 conserved hypothetical protein	K07460 yraN; putative endonuclease
D      Tfu_1816 conserved hypothetical protein	K07465 K07465; putative RecB family exonuclease
D      Tfu_0671 SMF protein	K04096 smf; DNA processing protein
D      Tfu_0715 similar to Rossmann fold nucleotide-binding protein involved in DNA uptake	K04096 smf; DNA processing protein
D      Tfu_2081 Recombination protein MgsA	K07478 ycaJ; putative ATPase
D      Tfu_1134 transposase-related protein	K07491 rayT; REP-associated tyrosine transposase
D      Tfu_1323 transposase-related protein	K07491 rayT; REP-associated tyrosine transposase
D      Tfu_0703 transposase, IS605 OrfB	K07496 K07496; putative transposase
D      Tfu_1133 transposase, IS605 OrfB	K07496 K07496; putative transposase
D      Tfu_1324 transposase	K07496 K07496; putative transposase
C    99979 Viral proteins
C    99998 Others
D      Tfu_1006 conserved hypothetical protein	K03969 pspA; phage shock protein A
D      Tfu_0045 Conserved hypothetical protein 103	K09747 ebfC; nucleoid-associated protein EbfC
B
B  09193 Unclassified: signaling and cellular processes
C    99977 Transport
D      Tfu_2011 putative cationic amino acid transporter	K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D      Tfu_1681 probable conserved integral membrane protein	K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D      Tfu_2296 putative integral membrane efflux protein	K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D      Tfu_2744 phosphate transport protein	K03306 TC.PIT; inorganic phosphate transporter, PiT family
D      Tfu_2251 sodium:alanine symporter	K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D      Tfu_1354 transmembrane transport protein	K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C    99978 Cell growth
D      Tfu_0754 putative ATP-binding protein	K07321 cooC; CO dehydrogenase maturation factor
D      Tfu_3113 single-stranded nucleic acid binding R3H	K06346 jag; spoIIIJ-associated protein
D      Tfu_1250 conserved hypothetical protein	K06377 spo0M; sporulation-control protein
C    99993 Cell motility
C    99995 Signaling proteins
D      Tfu_1389 carbon starvation-induced protein	K06200 cstA; carbon starvation protein
D      Tfu_2456 Small GTP-binding protein domain:GTP-binding protein TypA	K06207 typA; GTP-binding protein
D      Tfu_0844 phosphate starvation-inducible protein PhoH predicted ATPase	K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D      Tfu_0457 Nucleotide binding protein, PINc	K07175 phoH2; PhoH-like ATPase
D      Tfu_2672 conserved hypothetical protein	K09767 yajQ; cyclic-di-GMP-binding protein
C    99992 Structural proteins
C    99994 Others
D      Tfu_2908 phosphate uptake regulator, PhoU	K02039 phoU; phosphate transport system protein
D      Tfu_3007 similar to Uncharacterized protein involved in tolerance to divalent cations	K03926 cutA; periplasmic divalent cation tolerance protein
B
B  09194 Poorly characterized
C    99996 General function prediction only
D      Tfu_0123 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal	K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D      Tfu_2215 similar to Truncated hemoglobins	K06886 glbN; hemoglobin
D      Tfu_2997 conserved hypothetical protein	K06994 K06994; putative drug exporter of the RND superfamily
D      Tfu_1912 putative membrane protein, MmpL family	K06994 K06994; putative drug exporter of the RND superfamily
D      Tfu_0469 conserved hypothetical protein	K07001 K07001; NTE family protein
D      Tfu_2117 HAD-superfamily hydrolase subfamily IA, variant 3	K07025 K07025; putative hydrolase of the HAD superfamily
D      Tfu_2484 HAD-superfamily hydrolase subfamily IA, variant 3	K07025 K07025; putative hydrolase of the HAD superfamily
D      Tfu_1679 HAD-superfamily hydrolase subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1	K07025 K07025; putative hydrolase of the HAD superfamily
D      Tfu_1987 Iron-regulated ABC transporter membrane component SufB	K09014 sufB; Fe-S cluster assembly protein SufB
D      Tfu_1986 Iron-regulated ABC transporter permease protein SufD	K09015 sufD; Fe-S cluster assembly protein SufD
D      Tfu_0251 ribonuclease BN	K07058 K07058; membrane protein
D      Tfu_1887 similar to membrane protein	K07058 K07058; membrane protein
D      Tfu_1746 conserved hypothetical protein	K07100 K07100; putative phosphoribosyl transferase
D      Tfu_1884 conserved hypothetical protein	K07100 K07100; putative phosphoribosyl transferase
D      Tfu_1761 similar to Protein affecting phage T7 exclusion by the F plasmid	K07113 fxsA; UPF0716 protein FxsA
D      Tfu_0171 probable conserved membrane protein	K00389 yidH; putative membrane protein
D      Tfu_0790 putative membrane protein	K08972 K08972; putative membrane protein
D      Tfu_2249 conserved hypothetical protein	K08974 K08974; putative membrane protein
D      Tfu_1948 putative membrane protein	K08981 K08981; putative membrane protein
D      Tfu_2887 similar to membrane protein	K08981 K08981; putative membrane protein
C    99997 Function unknown
D      Tfu_1535 ankyrin	K06867 K06867; uncharacterized protein
D      Tfu_0451 conserved hypothetical protein	K06888 K06888; uncharacterized protein
D      Tfu_0267 conserved hypothetical protein	K06889 K06889; uncharacterized protein
D      Tfu_2435 putative hydrolase	K06889 K06889; uncharacterized protein
D      Tfu_0050 conserved hypothetical protein with similarity to AbiLI: abortive phage resistance protein	K06926 K06926; uncharacterized protein
D      Tfu_2545 conserved hypothetical protein	K06929 K06929; uncharacterized protein
D      Tfu_1430 putative ATP/GTP-binding protein	K06945 K06945; uncharacterized protein
D      Tfu_2447 putative ATP/GTP-binding protein	K06945 K06945; uncharacterized protein
D      Tfu_2047 putative ATP/GTP-binding protein	K06945 K06945; uncharacterized protein
D      Tfu_2804 putative ATP/GTP-binding protein	K06945 K06945; uncharacterized protein
D      Tfu_0760 putative ATP/GTP-binding protein	K06945 K06945; uncharacterized protein
D      Tfu_0943 putative ATP/GTP-binding protein	K06945 K06945; uncharacterized protein
D      Tfu_0663 conserved hypothetical protein	K06960 K06960; uncharacterized protein
D      Tfu_1960 conserved hypothetical protein	K06975 K06975; uncharacterized protein
D      Tfu_0751 conserved hypothetical protein	K06976 K06976; uncharacterized protein
D      Tfu_2951 conserved hypothetical protein	K07005 K07005; uncharacterized protein
D      Tfu_0093 hypothetical protein	K07006 K07006; uncharacterized protein
D      Tfu_2397 conserved hypothetical protein	K07018 K07018; uncharacterized protein
D      Tfu_2354 conserved hypothetical protein	K07032 K07032; uncharacterized protein
D      Tfu_1297 amidohydrolase family protein	K07045 K07045; uncharacterized protein
D      Tfu_2919 similar to metalloprotease	K07054 K07054; uncharacterized protein
D      Tfu_2920 conserved hypothetical protein	K07054 K07054; uncharacterized protein
D      Tfu_1485 conserved hypothetical protein	K07068 K07068; uncharacterized protein
D      Tfu_1072 conserved hypothetical protein	K07074 K07074; uncharacterized protein
D      Tfu_1875 conserved hypothetical protein	K07089 K07089; uncharacterized protein
D      Tfu_1919 conserved hypothetical protein	K07090 K07090; uncharacterized protein
D      Tfu_3084 conserved hypothetical membrane permease protein	K07090 K07090; uncharacterized protein
D      Tfu_2578 conserved hypothetical protein	K07090 K07090; uncharacterized protein
D      Tfu_0140 putative integral membrane protein	K07090 K07090; uncharacterized protein
D      Tfu_1694 conserved hypothetical protein	K07090 K07090; uncharacterized protein
D      Tfu_2294 phosphatase	K07093 K07093; uncharacterized protein
D      Tfu_0107 conserved hypothetical protein	K07098 K07098; uncharacterized protein
D      Tfu_0176 putative short chain dehydrogenase	K07124 K07124; uncharacterized protein
D      Tfu_0941 conserved hypothetical protein	K07131 K07131; uncharacterized protein
D      Tfu_1066 conserved hypothetical protein	K07148 K07148; uncharacterized protein
D      Tfu_0622 conserved hypothetical protein	K07148 K07148; uncharacterized protein
D      Tfu_1187 conserved hypothetical protein	K07150 K07150; uncharacterized protein
D      Tfu_1149 peptidase S16, lon N-terminal	K07157 K07157; uncharacterized protein
D      Tfu_1954 similar to Zn-ribbon protein possibly nucleic acid-binding	K07164 K07164; uncharacterized protein
D      Tfu_3115 Protein of unknown function DUF37	K08998 K08998; uncharacterized protein
D      Tfu_1396 conserved hypothetical protein	K08999 K08999; uncharacterized protein
D      Tfu_0430 conserved hypothetical protein	K09009 K09009; uncharacterized protein
D      Tfu_0108 conserved hypothetical protein	K09117 K09117; uncharacterized protein
D      Tfu_0541 conserved hypothetical protein	K09118 K09118; uncharacterized protein
D      Tfu_1519 conserved hypothetical protein	K09122 K09122; uncharacterized protein
D      Tfu_1949 putative membrane protein	K09167 K09167; uncharacterized protein
D      Tfu_2888 similar to Uncharacterized conserved protein	K09167 K09167; uncharacterized protein
D      Tfu_2174 similar to Uncharacterized conserved protein	K09702 K09702; uncharacterized protein
D      Tfu_0133 conserved hypothetical protein	K09763 K09763; uncharacterized protein
D      Tfu_0779 conserved hypothetical protein	K09764 K09764; uncharacterized protein
D      Tfu_2509 conserved hypothetical protein	K09791 K09791; uncharacterized protein
D      Tfu_2136 conserved hypothetical protein	K09861 K09861; uncharacterized protein
D      Tfu_0254 conserved hypothetical protein	K09927 K09927; uncharacterized protein
D      Tfu_0836 conserved hypothetical protein	K09940 K09940; uncharacterized protein
D      Tfu_2999 similar to Uncharacterized protein conserved in bacteria	K09957 K09957; uncharacterized protein
D      Tfu_2846 hypothetical protein	K09981 K09981; uncharacterized protein
D      Tfu_2745 conserved hypothetical protein	K07220 K07220; uncharacterized protein
D      Tfu_0777 similar to nucleic-acid-binding protein implicated in transcription termination	K07742 ylxR; uncharacterized protein
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#Last updated: June 13, 2024