+D GENES KO #

  KEGG Orthology (KO) - Thermovirga lienii

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:tli00010] D Tlie_1245 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Tlie_0575 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Tlie_1077 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Tlie_1382 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Tlie_0997 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Tlie_0995 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Tlie_0996 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Tlie_0818 Phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Tlie_0609 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Tlie_0755 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Tlie_0785 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Tlie_1116 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Tlie_1117 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Tlie_1114 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Tlie_1115 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Tlie_0956 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Tlie_0883 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Tlie_1756 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Tlie_0957 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Tlie_0884 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Tlie_1755 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Tlie_1406 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Tlie_1572 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Tlie_1871 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:tli00020] D Tlie_1677 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Tlie_1678 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Tlie_0956 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Tlie_0883 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Tlie_1756 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Tlie_0957 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Tlie_0884 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Tlie_1755 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Tlie_0885 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Tlie_0958 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Tlie_0955 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Tlie_0882 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Tlie_1893 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Tlie_1358 hypothetical protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Tlie_0398 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Tlie_0399 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Tlie_1871 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Tlie_1116 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Tlie_1117 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Tlie_1114 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Tlie_1115 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:tli00030] D Tlie_1245 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Tlie_0847 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Tlie_1372 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Tlie_1373 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Tlie_1477 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Tlie_1478 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Tlie_1281 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Tlie_0579 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Tlie_0387 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Tlie_0419 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Tlie_1572 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Tlie_0768 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Tlie_0012 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Tlie_0489 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Tlie_1551 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Tlie_1446 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Tlie_1226 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Tlie_1914 tungsten-dependent aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Tlie_1780 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Tlie_1797 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Tlie_1382 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Tlie_1077 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Tlie_0575 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:tli00040] D Tlie_1690 Cupin 2 conserved barrel domain protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D Tlie_0762 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Tlie_0847 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Tlie_1397 L-fuculose 1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:tli00051] D Tlie_1572 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Tlie_1397 L-fuculose 1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Tlie_0575 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Tlie_1077 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Tlie_0749 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Tlie_1382 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Tlie_0997 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Tlie_1236 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281] C 00052 Galactose metabolism [PATH:tli00052] D Tlie_1271 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Tlie_0762 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Tlie_1572 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Tlie_0575 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:tli00500] D Tlie_0762 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Tlie_0493 trehalose 6-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D Tlie_0386 trehalose 6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] D Tlie_1572 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Tlie_1245 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tli00520] D Tlie_0763 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Tlie_0761 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Tlie_0767 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Tlie_1055 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Tlie_0980 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Tlie_1056 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Tlie_1826 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D Tlie_1823 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Tlie_1825 transferase hexapeptide repeat containing protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D Tlie_1813 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D Tlie_1573 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] D Tlie_1572 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Tlie_0762 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Tlie_1271 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Tlie_1245 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Tlie_1236 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281] C 00620 Pyruvate metabolism [PATH:tli00620] D Tlie_1116 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Tlie_1117 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Tlie_1114 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Tlie_1115 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Tlie_0956 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Tlie_0883 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Tlie_1756 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Tlie_0957 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Tlie_0884 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Tlie_1755 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Tlie_1109 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Tlie_0755 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Tlie_1167 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Tlie_1893 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Tlie_1406 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Tlie_0619 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Tlie_1863 Protein of unknown function DUF2088 K22373 larA; lactate racemase [EC:5.1.2.1] D Tlie_1231 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Tlie_1859 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Tlie_0773 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Tlie_1479 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Tlie_0407 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Tlie_0398 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Tlie_0399 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Tlie_1871 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Tlie_0785 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Tlie_0141 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tli00630] D Tlie_1677 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Tlie_0403 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Tlie_0402 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Tlie_0401 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Tlie_0500 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Tlie_1318 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Tlie_1480 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Tlie_1733 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Tlie_1314 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Tlie_1313 aminotransferase class V K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Tlie_1310 dihydrodipicolinate synthase K18123 HOGA1; 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.3.16] D Tlie_1249 molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Tlie_1464 NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Tlie_1617 NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] C 00640 Propanoate metabolism [PATH:tli00640] D Tlie_1406 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Tlie_1109 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Tlie_1116 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Tlie_1117 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Tlie_1114 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Tlie_1115 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Tlie_1699 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Tlie_0403 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Tlie_0402 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Tlie_0401 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Tlie_0212 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D Tlie_0196 Glycerol dehydratase K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28] D Tlie_0197 dehydratase medium subunit K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28] D Tlie_0198 dehydratase small subunit K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28] D Tlie_0209 Aldehyde Dehydrogenase K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87] C 00650 Butanoate metabolism [PATH:tli00650] D Tlie_1701 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7] D Tlie_1704 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7] D Tlie_1702 phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D Tlie_1703 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D Tlie_1479 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Tlie_0407 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Tlie_0406 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Tlie_0405 sodium pump decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Tlie_1358 hypothetical protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Tlie_1699 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Tlie_1893 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Tlie_1116 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Tlie_1117 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Tlie_1114 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Tlie_1115 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Tlie_0956 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Tlie_0883 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Tlie_1756 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Tlie_0957 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Tlie_0884 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Tlie_1755 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Tlie_1835 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Tlie_0160 Alcohol dehydrogenase zinc-binding domain protein K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80] D Tlie_0137 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Tlie_1718 thiamine pyrophosphate central domain-containing protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Tlie_0143 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:tli00660] D Tlie_0137 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Tlie_1718 thiamine pyrophosphate central domain-containing protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Tlie_0143 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Tlie_0140 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Tlie_1562 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Tlie_1834 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Tlie_1564 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Tlie_0139 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Tlie_1563 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Tlie_1833 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Tlie_1565 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Tlie_0138 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism D Tlie_0997 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:tli00190] D Tlie_1247 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Tlie_1467 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Tlie_1621 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Tlie_1248 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Tlie_1618 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Tlie_1465 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Tlie_1358 hypothetical protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Tlie_0912 H+transporting two-sector ATPase alpha/beta subunit central region K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Tlie_0966 H+transporting two-sector ATPase alpha/beta subunit central region K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Tlie_1492 Sodium-transporting two-sector ATPase K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Tlie_1491 H+transporting two-sector ATPase alpha/beta subunit central region K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Tlie_0913 H+transporting two-sector ATPase alpha/beta subunit central region K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Tlie_0967 H+transporting two-sector ATPase alpha/beta subunit central region K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Tlie_0910 H+transporting two-sector ATPase C (AC39) subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Tlie_0964 H+transporting two-sector ATPase C (AC39) subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Tlie_1497 H+transporting two-sector ATPase C (AC39) subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Tlie_0914 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Tlie_0968 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Tlie_1499 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Tlie_0963 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Tlie_1493 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Tlie_0965 Vacuolar H+transporting two-sector ATPase F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D Tlie_1494 Vacuolar H+transporting two-sector ATPase F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D Tlie_1498 ATP synthase F0, B subunit K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D Tlie_0960 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D Tlie_0907 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Tlie_0961 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Tlie_1496 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Tlie_0908 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Tlie_0962 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Tlie_1495 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:tli00680] D Tlie_1249 molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Tlie_1464 NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Tlie_1617 NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Tlie_1480 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Tlie_1733 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Tlie_0500 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Tlie_0609 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Tlie_1382 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Tlie_1077 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Tlie_0575 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Tlie_0301 formylmethanofuran dehydrogenase subunit E region K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12] D Tlie_1109 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Tlie_1116 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Tlie_1117 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Tlie_1114 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Tlie_1115 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Tlie_0818 Phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Tlie_0816 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Tlie_1354 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Tlie_0817 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Tlie_1649 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] C 00910 Nitrogen metabolism [PATH:tli00910] D Tlie_1634 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Tlie_1413 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Tlie_0822 Glutamate dehydrogenase (NADP(+)) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Tlie_1318 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Tlie_1180 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:tli00920] D Tlie_0927 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Tlie_1555 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Tlie_0368 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Tlie_0367 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Tlie_1671 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Tlie_1732 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Tlie_0168 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Tlie_1507 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:tli00061] D Tlie_1100 acyl carrier protein K02078 acpP; acyl carrier protein D Tlie_1102 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Tlie_1104 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Tlie_1099 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Tlie_1101 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Tlie_0549 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Tlie_1103 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D Tlie_0824 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D Tlie_0824 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:tli00561] D Tlie_0212 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D Tlie_1105 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Tlie_1405 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Tlie_1127 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Tlie_1885 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] C 00564 Glycerophospholipid metabolism [PATH:tli00564] D Tlie_0361 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Tlie_1405 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Tlie_1127 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Tlie_1050 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Tlie_0395 CDP-diacylglycerol/serineO-phosphatidyltransfera se K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Tlie_0394 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Tlie_1331 CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Tlie_0850 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D Tlie_1663 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D Tlie_0827 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:tli00230] D Tlie_0886 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Tlie_1572 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Tlie_0768 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Tlie_1148 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Tlie_1152 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Tlie_1150 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Tlie_1147 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D Tlie_1145 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Tlie_1146 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Tlie_1149 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Tlie_1153 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Tlie_1144 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Tlie_1078 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Tlie_1151 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Tlie_1170 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Tlie_0888 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Tlie_1062 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Tlie_0941 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Tlie_0920 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Tlie_0428 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Tlie_0896 Xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D Tlie_0602 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Tlie_1124 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Tlie_0294 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Tlie_1340 ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Tlie_0786 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Tlie_0617 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Tlie_0539 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Tlie_1366 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Tlie_1299 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Tlie_0667 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Tlie_0772 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Tlie_1873 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D Tlie_1180 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:tli00240] D Tlie_1262 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Tlie_1263 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Tlie_1096 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Tlie_1095 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Tlie_1093 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Tlie_1094 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Tlie_1091 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Tlie_1092 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Tlie_1182 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Tlie_0772 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Tlie_1376 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Tlie_0582 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Tlie_1128 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Tlie_1554 AAA ATPase K00876 udk; uridine kinase [EC:2.7.1.48] D Tlie_1170 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Tlie_1058 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Tlie_1097 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Tlie_1299 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Tlie_0889 thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D Tlie_0779 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Tlie_1340 ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Tlie_0294 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Tlie_0795 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Tlie_1083 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Tlie_0724 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Tlie_0744 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Tlie_1722 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:tli00250] D Tlie_1179 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_1476 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_0020 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Tlie_0415 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Tlie_1431 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Tlie_0998 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Tlie_1512 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3] D Tlie_0500 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Tlie_1282 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Tlie_1168 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Tlie_0540 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Tlie_1366 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Tlie_1078 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Tlie_1096 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Tlie_1699 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Tlie_0822 Glutamate dehydrogenase (NADP(+)) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Tlie_1889 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D Tlie_1318 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Tlie_1262 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Tlie_1263 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Tlie_0295 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Tlie_1146 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Tlie_0763 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Tlie_1148 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:tli00260] D Tlie_0591 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Tlie_0592 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Tlie_0421 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Tlie_1552 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Tlie_1159 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Tlie_0590 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Tlie_0397 Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 thrC; threonine synthase [EC:4.2.3.1] D Tlie_0589 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Tlie_1734 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Tlie_0423 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Tlie_1480 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Tlie_1733 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Tlie_0500 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Tlie_0818 Phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Tlie_0816 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Tlie_1354 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Tlie_0817 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Tlie_1338 pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Tlie_1314 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Tlie_1313 aminotransferase class V K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Tlie_0395 CDP-diacylglycerol/serineO-phosphatidyltransfera se K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Tlie_0059 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Tlie_0060 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Tlie_1580 serine dehydratase alpha chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Tlie_1156 Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Tlie_1881 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Tlie_1839 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Tlie_1840 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Tlie_1646 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:tli00270] D Tlie_0368 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Tlie_0367 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Tlie_1671 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Tlie_1732 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Tlie_0291 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Tlie_0687 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Tlie_1384 adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Tlie_1043 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Tlie_1045 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Tlie_1062 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Tlie_0871 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Tlie_0869 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Tlie_0870 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Tlie_0591 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Tlie_0592 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Tlie_0421 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Tlie_1552 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Tlie_1159 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Tlie_0168 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Tlie_1507 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Tlie_0167 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Tlie_1705 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Tlie_1706 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Tlie_1179 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_1476 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_1555 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Tlie_1698 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D Tlie_0059 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Tlie_0060 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Tlie_1580 serine dehydratase alpha chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Tlie_0816 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:tli00280] D Tlie_1705 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Tlie_1706 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Tlie_0403 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Tlie_0402 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Tlie_0401 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Tlie_1835 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tli00290] D Tlie_1156 Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Tlie_1881 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Tlie_0140 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Tlie_1562 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Tlie_1834 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Tlie_1564 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Tlie_0139 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Tlie_1563 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Tlie_1833 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Tlie_1565 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Tlie_0138 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Tlie_0137 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Tlie_1718 thiamine pyrophosphate central domain-containing protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Tlie_0143 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Tlie_0142 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Tlie_0028 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Tlie_0144 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Tlie_1705 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Tlie_1706 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Tlie_0141 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:tli00300] D Tlie_0421 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Tlie_1552 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Tlie_1159 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Tlie_0591 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Tlie_0592 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Tlie_0251 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Tlie_0019 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Tlie_0337 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Tlie_1669 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Tlie_1659 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Tlie_1658 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Tlie_0383 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Tlie_0813 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D Tlie_1661 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D Tlie_1468 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D Tlie_1469 L-2-aminoadipate N-acetyltransferase K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43] D Tlie_1471 N2-acetyl-L-aminoadipate kinase, N-acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D Tlie_1470 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D Tlie_1472 aminotransferase class-III K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D Tlie_1473 acetylornithine deacetylase, N2-acetyl-L-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] D Tlie_0973 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Tlie_0974 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D Tlie_0336 L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D Tlie_1391 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] C 00220 Arginine biosynthesis [PATH:tli00220] D Tlie_1041 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Tlie_1727 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Tlie_1168 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Tlie_0540 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Tlie_1042 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D Tlie_0295 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Tlie_1146 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Tlie_1318 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Tlie_1262 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Tlie_1263 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Tlie_1180 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D Tlie_0822 Glutamate dehydrogenase (NADP(+)) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Tlie_1179 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_1476 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_1468 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D Tlie_1471 N2-acetyl-L-aminoadipate kinase, N-acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D Tlie_1470 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D Tlie_1472 aminotransferase class-III K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D Tlie_1473 acetylornithine deacetylase, N2-acetyl-L-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] C 00330 Arginine and proline metabolism [PATH:tli00330] D Tlie_1046 arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D Tlie_1044 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Tlie_1045 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Tlie_1384 adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Tlie_1043 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Tlie_1792 thiamine pyrophosphate TPP-binding domain-containing protein K12253 aruI; 5-guanidino-2-oxopentanoate decarboxylase [EC:4.1.1.75] D Tlie_1910 ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D Tlie_1454 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Tlie_1889 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D Tlie_1574 pyruvate formate-lyase K23121 pflD; trans-4-hydroxy-L-proline dehydratase [EC:4.2.1.172] D Tlie_1179 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_1476 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_1310 dihydrodipicolinate synthase K18123 HOGA1; 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.3.16] D Tlie_1583 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] C 00340 Histidine metabolism [PATH:tli00340] D Tlie_0834 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Tlie_0835 histidyl-tRNA synthetase 2 K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Tlie_0829 phosphoribosyl-AMP cyclohydrolase, phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Tlie_0831 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Tlie_0832 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Tlie_0830 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Tlie_0833 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Tlie_0286 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_0837 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_1054 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_1793 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_0836 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Tlie_1023 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D Tlie_0370 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D Tlie_0372 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D Tlie_0369 Arginase/agmatinase/formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D Tlie_0373 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] C 00350 Tyrosine metabolism [PATH:tli00350] D Tlie_1179 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_1476 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_0286 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_0837 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_1054 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_1793 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_0293 4-hydroxy-2-oxovalerate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] C 00360 Phenylalanine metabolism [PATH:tli00360] D Tlie_0381 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Tlie_0298 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Tlie_1179 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_1476 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_0286 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_0837 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_1054 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_1793 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:tli00380] D Tlie_0145 Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D Tlie_1330 Tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tli00400] D Tlie_1899 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Tlie_1894 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] D Tlie_0255 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D Tlie_1897 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Tlie_1895 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Tlie_1845 Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Tlie_1844 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Tlie_1843 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Tlie_1841 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Tlie_1842 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Tlie_1839 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Tlie_1840 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Tlie_1646 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Tlie_1838 Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Tlie_1898 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Tlie_1179 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_1476 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_0286 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_0837 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_1054 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_1793 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:tli00410] D Tlie_0189 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Tlie_1699 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Tlie_1244 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Tlie_1722 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] C 00430 Taurine and hypotaurine metabolism [PATH:tli00430] D Tlie_1762 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Tlie_1282 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Tlie_1109 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:tli00450] D Tlie_1507 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Tlie_0291 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Tlie_0748 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Tlie_0052 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Tlie_1139 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Tlie_0634 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:tli00460] D Tlie_1762 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Tlie_1431 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Tlie_0998 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Tlie_1480 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Tlie_1733 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:tli00470] D Tlie_1283 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Tlie_0587 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Tlie_1220 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Tlie_1222 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Tlie_0295 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Tlie_1146 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Tlie_0976 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Tlie_0020 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Tlie_0415 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Tlie_1698 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D Tlie_1659 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Tlie_1658 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Tlie_0758 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12] D Tlie_1583 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] C 00480 Glutathione metabolism [PATH:tli00480] D Tlie_1762 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Tlie_0278 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D Tlie_0506 peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Tlie_1678 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Tlie_1045 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:tli00540] D Tlie_0550 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Tlie_0548 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Tlie_0547 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Tlie_0553 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Tlie_0554 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Tlie_0557 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Tlie_0560 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Tlie_0559 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Tlie_0551 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Tlie_0558 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Tlie_0561 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Tlie_0411 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Tlie_1238 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Tlie_0825 PfkB domain protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D Tlie_1235 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Tlie_1237 Nucleotidyl transferase K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71] D Tlie_0568 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D Tlie_0571 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis [PATH:tli00542] D Tlie_1057 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tli00541] D Tlie_0762 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Tlie_1271 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Tlie_1236 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281] D Tlie_0767 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Tlie_1056 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Tlie_1826 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D Tlie_1823 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Tlie_1825 transferase hexapeptide repeat containing protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D Tlie_1813 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D Tlie_1573 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] C 00550 Peptidoglycan biosynthesis [PATH:tli00550] D Tlie_1055 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Tlie_0980 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Tlie_0979 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Tlie_0976 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Tlie_0973 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Tlie_0587 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Tlie_1220 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Tlie_1222 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Tlie_0974 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Tlie_1051 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Tlie_1378 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Tlie_0975 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Tlie_0978 Undecaprenyldiphospho-muramoylpentapeptidebeta-N -acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Tlie_0787 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Tlie_0623 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Tlie_0972 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) C 00552 Teichoic acid biosynthesis [PATH:tli00552] D Tlie_1378 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Tlie_1057 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Tlie_0904 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Tlie_1000 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Tlie_1885 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:tli00543] D Tlie_1057 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Tlie_0176 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D Tlie_0368 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:tli00730] D Tlie_1850 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Tlie_0173 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Tlie_0517 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Tlie_1010 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Tlie_1851 thiazole-adenylate synthase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59] D Tlie_0172 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Tlie_1014 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Tlie_0667 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:tli00740] D Tlie_0901 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Tlie_0899 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Tlie_0902 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Tlie_0900 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Tlie_0929 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Tlie_0886 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:tli00750] D Tlie_0397 Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 thrC; threonine synthase [EC:4.2.3.1] D Tlie_0589 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Tlie_1734 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Tlie_1802 pyridoxal phosphate synthase yaaD subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Tlie_1801 pyridoxal phosphate synthase yaaE subunit K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:tli00760] D Tlie_0430 Quinolinate phosphoribosyl transferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Tlie_0888 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Tlie_1170 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Tlie_1001 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Tlie_0772 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Tlie_1035 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Tlie_0272 isochorismatase hydrolase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D Tlie_0789 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Tlie_1868 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Tlie_1008 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Tlie_1837 2,3-dimethylmalate lyase K20454 dml; 2,3-dimethylmalate lyase [EC:4.1.3.32] C 00770 Pantothenate and CoA biosynthesis [PATH:tli00770] D Tlie_0137 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Tlie_1718 thiamine pyrophosphate central domain-containing protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Tlie_0143 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Tlie_0142 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Tlie_0028 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Tlie_0144 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Tlie_1243 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Tlie_0498 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Tlie_1244 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Tlie_1257 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Tlie_1122 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Tlie_0772 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Tlie_1111 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Tlie_1173 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Tlie_0946 holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Tlie_1705 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Tlie_1706 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Tlie_1722 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Tlie_0189 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:tli00780] D Tlie_1099 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Tlie_1101 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Tlie_0549 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Tlie_1089 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism D Tlie_1314 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Tlie_1313 aminotransferase class V K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] C 00790 Folate biosynthesis [PATH:tli00790] D Tlie_1307 GTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D Tlie_1357 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Tlie_1356 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Tlie_1063 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Tlie_0901 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Tlie_1308 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Tlie_0988 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Tlie_0989 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Tlie_0986 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Tlie_0987 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Tlie_1622 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:tli00670] D Tlie_0296 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Tlie_1721 5, 10-methylenetetrahydrofolate dehydrogenase (NADP+), methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Tlie_0371 Glutamate formimidoyltransferase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D Tlie_1480 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Tlie_1733 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Tlie_1150 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Tlie_1151 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Tlie_0373 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] D Tlie_0880 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Tlie_0291 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Tlie_0744 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Tlie_0292 5,10-methylenetetrahydrofolate reductase (NAD(P)) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:tli00860] D Tlie_1198 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Tlie_1515 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Tlie_1075 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Tlie_0164 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Tlie_0161 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Tlie_0148 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Tlie_0147 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Tlie_0149 nicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Tlie_0146 phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Tlie_0163 GHMP kinase K16651 pduX; L-threonine kinase [EC:2.7.1.177] D Tlie_0162 L-threonine-O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:tli00900] D Tlie_1010 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Tlie_1049 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Tlie_0919 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D Tlie_1136 GHMP kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Tlie_1047 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Tlie_0877 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Tlie_1011 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Tlie_1051 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation D Tlie_1835 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Tlie_1372 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Tlie_1373 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Tlie_1477 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Tlie_1478 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Tlie_1281 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures [PATH:tli01054] D Tlie_0020 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Tlie_0415 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:tli00261] D Tlie_0591 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Tlie_0592 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Tlie_0251 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis D Tlie_1572 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis [PATH:tli00401] D Tlie_1898 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Tlie_1179 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_1476 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_0286 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_0837 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_1054 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_1793 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Tlie_1845 Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Tlie_1844 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Tlie_1102 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Tlie_1101 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Tlie_1100 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D Tlie_0687 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites D Tlie_0758 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:tli00362] D Tlie_0811 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Tlie_1479 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Tlie_0407 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Tlie_0406 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Tlie_0405 sodium pump decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta C 00627 Aminobenzoate degradation D Tlie_1167 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D Tlie_0811 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation D Tlie_1116 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Tlie_1117 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Tlie_1114 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Tlie_1115 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D Tlie_0811 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:tli03020] D Tlie_0638 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Tlie_0639 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Tlie_0675 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:tli03010] D Tlie_0878 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Tlie_1184 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Tlie_0652 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Tlie_0674 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Tlie_0663 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Tlie_1325 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Tlie_0642 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Tlie_0660 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Tlie_0432 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Tlie_0645 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Tlie_0673 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Tlie_0641 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Tlie_0672 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Tlie_0659 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Tlie_0722 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Tlie_1424 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Tlie_0655 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Tlie_1323 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Tlie_0650 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Tlie_0704 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Tlie_1343 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Tlie_0447 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Tlie_0649 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Tlie_0646 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Tlie_0647 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Tlie_0658 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Tlie_0661 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Tlie_0449 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Tlie_1321 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Tlie_0448 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Tlie_0446 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Tlie_0431 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Tlie_0656 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Tlie_0665 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Tlie_0653 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Tlie_0676 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Tlie_0662 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Tlie_1420 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Tlie_0730 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Tlie_1005 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Tlie_0651 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Tlie_0648 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Tlie_0657 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Tlie_0769 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Tlie_1003 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Tlie_1013 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Tlie_0654 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Tlie_0664 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Tlie_0743 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Tlie_1107 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Tlie_0443 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Tlie_0709 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Tlie_0729 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Tlie_0671 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Tlie_0640 ribosomal protein L7AE family protein K07590 RP-L7A; large subunit ribosomal protein L7A D Tlie_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Tlie_R0024 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Tlie_R0021 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Tlie_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Tlie_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Tlie_R0022 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Tlie_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Tlie_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Tlie_R0023 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:tli00970] D Tlie_R0026 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Tlie_R0057 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Tlie_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Tlie_R0050 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Tlie_R0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Tlie_R0041 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Tlie_R0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Tlie_R0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Tlie_R0013 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Tlie_R0009 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Tlie_R0012 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Tlie_R0055 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Tlie_R0020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Tlie_R0016 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Tlie_R0056 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Tlie_R0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Tlie_R0034 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Tlie_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Tlie_R0040 tRNA-His K14226 tRNA-His; tRNA His D Tlie_R0025 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Tlie_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Tlie_R0059 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Tlie_R0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Tlie_R0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Tlie_R0058 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Tlie_R0015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Tlie_R0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Tlie_R0037 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Tlie_R0046 tRNA-Met K14230 tRNA-Met; tRNA Met D Tlie_R0031 tRNA-Met K14230 tRNA-Met; tRNA Met D Tlie_R0032 tRNA-Met K14230 tRNA-Met; tRNA Met D Tlie_R0010 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Tlie_R0043 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Tlie_R0045 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Tlie_R0053 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Tlie_R0048 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Tlie_R0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Tlie_R0051 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Tlie_R0049 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Tlie_R0004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Tlie_R0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Tlie_R0017 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Tlie_R0007 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Tlie_R0005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Tlie_R0054 tRNA-Val K14237 tRNA-Val; tRNA Val D Tlie_R0008 tRNA-Val K14237 tRNA-Val; tRNA Val D Tlie_R0033 tRNA-Val K14237 tRNA-Val; tRNA Val D Tlie_1198 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Tlie_1252 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Tlie_1251 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Tlie_1253 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Tlie_1451 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Tlie_0872 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Tlie_1166 Alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Tlie_1443 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Tlie_0782 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Tlie_0783 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Tlie_0727 Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Tlie_0903 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Tlie_1139 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Tlie_0897 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Tlie_0634 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Tlie_0880 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Tlie_1064 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Tlie_0702 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Tlie_0933 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Tlie_1255 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Tlie_1327 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Tlie_0417 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Tlie_1603 YbaK/prolyl-tRNA synthetase associated region K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Tlie_1444 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Tlie_0733 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Tlie_0734 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Tlie_0809 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Tlie_1132 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:tli03060] D Tlie_0666 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Tlie_0444 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Tlie_0429 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Tlie_0612 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Tlie_0613 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Tlie_0611 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Tlie_0712 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Tlie_1329 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Tlie_1425 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Tlie_R0047 RNA component of signal recognition particle K01983 ffs; SRP RNA D Tlie_1080 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Tlie_0524 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:tli04122] D Tlie_0517 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Tlie_1555 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Tlie_0051 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Tlie_1074 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Tlie_0988 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Tlie_1913 MoaD family protein K03636 moaD; sulfur-carrier protein D Tlie_0289 Rhodanese domain protein K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11] D Tlie_1449 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Tlie_0989 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Tlie_1227 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:tli03018] D Tlie_0609 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Tlie_0723 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Tlie_1489 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Tlie_0580 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Tlie_1300 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Tlie_1381 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D Tlie_0575 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Tlie_1350 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Tlie_1601 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Tlie_0601 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09124 Replication and repair C 03030 DNA replication [PATH:tli03030] D Tlie_0753 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Tlie_0752 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Tlie_1082 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Tlie_0703 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Tlie_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Tlie_1320 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Tlie_0606 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Tlie_1324 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Tlie_1549 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Tlie_0526 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Tlie_1197 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Tlie_1254 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:tli03410] D Tlie_1072 HhH-GPD family protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Tlie_1052 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Tlie_0016 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Tlie_0757 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Tlie_1197 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Tlie_0616 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Tlie_1254 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:tli03420] D Tlie_0771 DEAD/DEAH box helicase domain protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Tlie_0944 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Tlie_0943 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Tlie_0898 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Tlie_1174 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Tlie_1197 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Tlie_1254 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:tli03430] D Tlie_0874 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Tlie_0738 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Tlie_0875 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Tlie_1174 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Tlie_0868 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Tlie_1012 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Tlie_0616 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Tlie_1324 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Tlie_0753 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Tlie_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Tlie_0752 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Tlie_0703 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Tlie_1082 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Tlie_1254 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:tli03440] D Tlie_0616 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Tlie_1324 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Tlie_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Tlie_0781 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Tlie_0917 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D Tlie_0853 RecA protein K03553 recA; recombination protein RecA D Tlie_1197 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Tlie_1032 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Tlie_1031 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Tlie_1033 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Tlie_1302 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Tlie_0753 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Tlie_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Tlie_0752 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Tlie_0703 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Tlie_1082 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Tlie_1121 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:tli02010] D Tlie_1738 ABC transporter, periplasmic substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D Tlie_1739 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein D Tlie_1740 ABC transporter related protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Tlie_1798 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Tlie_1799 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Tlie_1800 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Tlie_1558 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D Tlie_1556 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein D Tlie_1557 ABC transporter related protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Tlie_0482 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D Tlie_1796 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D Tlie_0483 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Tlie_0485 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Tlie_1795 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Tlie_0484 ABC transporter related protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Tlie_1794 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Tlie_1084 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Tlie_1086 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Tlie_1085 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Tlie_0892 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D Tlie_1726 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D Tlie_1724 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein D Tlie_0894 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein D Tlie_0895 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Tlie_1723 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein D Tlie_0893 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D Tlie_1725 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D Tlie_0041 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Tlie_0040 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Tlie_0039 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Tlie_0038 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Tlie_0695 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Tlie_1018 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Tlie_1335 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Tlie_0694 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Tlie_1022 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Tlie_0693 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Tlie_1021 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Tlie_1334 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Tlie_1333 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Tlie_0692 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Tlie_1020 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Tlie_0691 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Tlie_1019 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Tlie_1332 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Tlie_0154 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Tlie_0152 ABC-3 protein K09816 znuB; zinc transport system permease protein D Tlie_0153 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Tlie_1641 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Tlie_1643 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Tlie_1644 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Tlie_1640 Nickel transport complex, NikM subunit, transmembrane K10094 cbiK; nickel transport protein D Tlie_1642 hypothetical protein K16915 cbiL; nickel transport protein D Tlie_1870 BioY protein K03523 bioY; biotin transport system substrate-specific component D Tlie_0679 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Tlie_0677 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Tlie_0678 cobalt ABC transporter, ATPase subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Tlie_0552 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Tlie_0594 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Tlie_1370 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Tlie_1371 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein D Tlie_0556 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] C 02060 Phosphotransferase system (PTS) D Tlie_0749 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:tli03070] D Tlie_0435 outer membrane efflux protein K12340 tolC; outer membrane protein D Tlie_1636 outer membrane efflux protein K12340 tolC; outer membrane protein D Tlie_0062 hypothetical protein K02456 gspG; general secretion pathway protein G D Tlie_0857 hypothetical protein K02456 gspG; general secretion pathway protein G D Tlie_0612 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Tlie_0613 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Tlie_0444 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Tlie_0429 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Tlie_0666 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Tlie_0611 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Tlie_0712 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Tlie_1329 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Tlie_1080 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Tlie_1425 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:tli02020] D Tlie_0035 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Tlie_0036 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Tlie_0041 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Tlie_1485 integral membrane sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Tlie_0716 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Tlie_0130 flagellin domain protein K02406 fliC; flagellin D Tlie_0072 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Tlie_0086 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Tlie_1676 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Tlie_1675 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D Tlie_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Tlie_1539 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Tlie_0826 citrate lyase ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D Tlie_1567 citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D Tlie_1679 citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D Tlie_1568 Citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D Tlie_1680 Citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D Tlie_1569 citrate lyase, alpha subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D Tlie_1681 citrate lyase, alpha subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D Tlie_0839 holo-ACP synthase CitX K05964 citX; holo-ACP synthase [EC:2.7.7.61] D Tlie_1436 Triphosphoribosyl-dephospho-CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D Tlie_1715 response regulator receiver and unknown domain protein K11692 K11692; two-component system, CitB family, response regulator DctR D Tlie_1888 response regulator receiver and unknown domain protein K11692 K11692; two-component system, CitB family, response regulator DctR D Tlie_1231 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Tlie_1859 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Tlie_0131 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Tlie_1318 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Tlie_1607 short chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter D Tlie_0282 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Tlie_0093 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Tlie_0120 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Tlie_0165 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Tlie_0106 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Tlie_1846 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Tlie_0123 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Tlie_0084 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Tlie_0097 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Tlie_0118 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Tlie_0136 CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Tlie_1693 Extracellular solute-binding protein, family 7 K11688 dctP; C4-dicarboxylate-binding protein DctP D Tlie_0220 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D Tlie_0221 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Tlie_1577 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Tlie_0295 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Tlie_0191 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN D Tlie_0435 outer membrane efflux protein K12340 tolC; outer membrane protein D Tlie_1636 outer membrane efflux protein K12340 tolC; outer membrane protein D Tlie_1056 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:tli02024] D Tlie_1845 Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Tlie_1844 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Tlie_0695 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Tlie_1018 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Tlie_1335 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Tlie_0694 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Tlie_1022 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Tlie_0693 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Tlie_1021 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Tlie_1334 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Tlie_1333 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Tlie_0692 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Tlie_1020 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Tlie_0691 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Tlie_1019 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Tlie_1332 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Tlie_0824 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Tlie_0899 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Tlie_0352 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Tlie_0351 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Tlie_0350 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Tlie_0349 ABC transporter related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Tlie_0712 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Tlie_0444 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Tlie_0429 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Tlie_0666 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Tlie_0611 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Tlie_1329 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Tlie_1080 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Tlie_1425 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:tli02030] D Tlie_0120 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Tlie_0165 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Tlie_0106 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Tlie_1846 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Tlie_0084 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Tlie_0123 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Tlie_0097 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Tlie_0117 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Tlie_0099 CheC domain protein K03409 cheX; chemotaxis protein CheX D Tlie_0118 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Tlie_0136 CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Tlie_0116 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Tlie_0093 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Tlie_0075 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Tlie_0105 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Tlie_0092 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Tlie_0086 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Tlie_0082 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:tli02040] D Tlie_0073 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Tlie_0074 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Tlie_0075 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Tlie_0076 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH D Tlie_0077 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Tlie_0104 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Tlie_0105 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Tlie_0092 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Tlie_0100 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Tlie_0101 export protein FliQ family 3 K02420 fliQ; flagellar biosynthesis protein FliQ D Tlie_0102 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR D Tlie_0081 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Tlie_0071 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Tlie_0111 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Tlie_0089 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Tlie_0090 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Tlie_0068 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Tlie_0069 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Tlie_0091 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Tlie_0135 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Tlie_0112 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Tlie_0113 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Tlie_0114 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Tlie_0110 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Tlie_0070 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Tlie_0130 flagellin domain protein K02406 fliC; flagellin D Tlie_0107 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D Tlie_0109 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Tlie_0086 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Tlie_0082 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Tlie_0122 putative RNA polymerase, sigma 70 family subunit K03086 rpoD; RNA polymerase primary sigma factor D Tlie_0607 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Tlie_0282 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Tlie_0072 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Tlie_0609 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:tli04980] D Tlie_1515 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Tlie_1059 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-] D Tlie_0291 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:tli01501] D Tlie_0436 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Tlie_0806 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Tlie_0435 outer membrane efflux protein K12340 tolC; outer membrane protein D Tlie_1636 outer membrane efflux protein K12340 tolC; outer membrane protein D Tlie_0787 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Tlie_0623 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:tli01502] D Tlie_1539 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Tlie_0587 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Tlie_1220 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Tlie_1222 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Tlie_1283 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Tlie_0974 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Tlie_0975 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Tlie_0978 Undecaprenyldiphospho-muramoylpentapeptidebeta-N -acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tli01503] D Tlie_1485 integral membrane sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Tlie_0425 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Tlie_0716 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Tlie_0436 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Tlie_0806 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Tlie_0435 outer membrane efflux protein K12340 tolC; outer membrane protein D Tlie_1636 outer membrane efflux protein K12340 tolC; outer membrane protein D Tlie_0550 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:tli01000] C 01001 Protein kinases [BR:tli01001] D Tlie_0846 PASTA domain containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Tlie_1627 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Tlie_0035 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Tlie_1485 integral membrane sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Tlie_1714 signal transduction histidine kinase regulating citrate/malate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D Tlie_0084 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:tli01009] D Tlie_0870 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Tlie_0575 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 01002 Peptidases and inhibitors [BR:tli01002] D Tlie_1525 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Tlie_0595 hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D Tlie_0602 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Tlie_1148 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Tlie_0763 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Tlie_0391 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124] D Tlie_1410 oligopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Tlie_1539 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Tlie_0506 peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Tlie_0019 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Tlie_0337 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Tlie_1669 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Tlie_1742 amidohydrolase K12940 abgA; aminobenzoyl-glutamate utilization protein A D Tlie_0668 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Tlie_1272 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Tlie_0942 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Tlie_1048 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Tlie_1529 peptidase M55 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D Tlie_0705 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D Tlie_0716 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Tlie_1068 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Tlie_1066 ATP-dependent proteinase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Tlie_0524 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Tlie_1368 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Tlie_0534 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Tlie_1762 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Tlie_0424 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein D Tlie_1016 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:tli01003] D Tlie_1885 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Tlie_0787 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Tlie_0904 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Tlie_1057 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Tlie_0176 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D Tlie_0386 trehalose 6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] C 01005 Lipopolysaccharide biosynthesis proteins [BR:tli01005] D Tlie_0550 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Tlie_0554 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Tlie_0548 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Tlie_0547 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Tlie_0553 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Tlie_0557 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Tlie_0411 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Tlie_0561 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Tlie_0563 Glutamine--scyllo-inositol transaminase K19715 kdnA; 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:2.6.1.109] D Tlie_0559 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Tlie_0558 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Tlie_0551 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Tlie_0560 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Tlie_0825 PfkB domain protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D Tlie_0571 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D Tlie_0568 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D Tlie_1238 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Tlie_1235 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Tlie_1057 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tli01011] D Tlie_1055 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Tlie_0980 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Tlie_0979 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Tlie_0976 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Tlie_0973 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Tlie_0587 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Tlie_1220 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Tlie_1222 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Tlie_1283 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Tlie_0975 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Tlie_0978 Undecaprenyldiphospho-muramoylpentapeptidebeta-N -acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Tlie_1378 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Tlie_0596 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Tlie_1828 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Tlie_0787 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Tlie_0623 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Tlie_0972 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Tlie_1539 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Tlie_1017 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Tlie_1029 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Tlie_0425 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:tli01004] D Tlie_1102 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Tlie_1104 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Tlie_1099 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Tlie_1101 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Tlie_0549 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Tlie_1103 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D Tlie_0827 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Tlie_1406 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Tlie_0824 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Tlie_1105 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Tlie_1405 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Tlie_1127 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:tli01008] D Tlie_0020 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Tlie_0415 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:tli01006] D Tlie_1011 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Tlie_1051 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Tlie_0876 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:tli01007] D Tlie_1198 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Tlie_1451 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Tlie_0809 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Tlie_1132 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Tlie_0897 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Tlie_1327 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Tlie_0634 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Tlie_0933 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Tlie_1064 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Tlie_0702 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Tlie_1255 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Tlie_1443 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Tlie_1444 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Tlie_0782 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Tlie_0783 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Tlie_0903 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Tlie_0417 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Tlie_1603 YbaK/prolyl-tRNA synthetase associated region K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Tlie_0727 Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Tlie_0872 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Tlie_1166 Alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Tlie_0733 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Tlie_0734 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Tlie_1179 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_1476 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Tlie_0383 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Tlie_0185 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-] D Tlie_0286 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_0837 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_1054 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_1793 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Tlie_1338 pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Tlie_0683 L-lysine 6-transaminase precursor K03918 lat; L-lysine 6-transaminase [EC:2.6.1.36] D Tlie_1910 ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D Tlie_1472 aminotransferase class-III K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D Tlie_1699 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Tlie_1705 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Tlie_1706 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Tlie_0500 alanine-glyoxylate aminotransferase apoenzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:tli00194] B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:tli03000] D Tlie_1737 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D Tlie_1553 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Tlie_0032 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Tlie_1500 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Tlie_1560 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Tlie_0838 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Tlie_1508 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Tlie_1534 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Tlie_1635 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D Tlie_0487 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Tlie_1435 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Tlie_1089 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Tlie_1135 phosphoribosyltransferase K09685 purR; HTH-type transcriptional regulator, purine operon repressor D Tlie_1194 transcriptional regulator, CdaR K02647 cdaR; carbohydrate diacid regulator D Tlie_0610 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Tlie_0536 GTP-sensing pleiotropic transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor D Tlie_1039 transcriptional regulator NikR, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D Tlie_1185 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Tlie_1605 transcriptional regulator, CdaR K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D Tlie_1875 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Tlie_1352 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Tlie_1404 transcriptional repressor, CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D Tlie_0754 tryptophan RNA-binding attenuator protein K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D Tlie_1097 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Tlie_0934 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D Tlie_1341 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D Tlie_0969 MraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:tli03021] D Tlie_0675 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Tlie_0638 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Tlie_0639 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Tlie_0122 putative RNA polymerase, sigma 70 family subunit K03086 rpoD; RNA polymerase primary sigma factor D Tlie_0607 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Tlie_0890 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K27000 sigH; RNA polymerase sigma-H factor D Tlie_0282 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Tlie_0072 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Tlie_0922 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Tlie_0867 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Tlie_0445 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Tlie_1627 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Tlie_0934 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D Tlie_0588 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Tlie_0580 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:tli03019] D Tlie_0630 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Tlie_1098 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Tlie_1381 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D Tlie_1300 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Tlie_0819 metal dependent phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D Tlie_1489 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Tlie_0609 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Tlie_0723 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Tlie_0580 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Tlie_0575 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Tlie_1350 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Tlie_1601 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Tlie_0601 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Tlie_0131 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Tlie_0991 hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:tli03011] D Tlie_0878 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Tlie_1184 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Tlie_0652 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Tlie_0674 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Tlie_0663 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Tlie_1325 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Tlie_0642 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Tlie_0660 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Tlie_0432 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Tlie_0645 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Tlie_0673 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Tlie_0641 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Tlie_0672 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Tlie_0659 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Tlie_0722 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Tlie_1424 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Tlie_0655 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Tlie_1323 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Tlie_0650 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Tlie_0704 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Tlie_1343 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Tlie_0447 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Tlie_0649 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Tlie_0646 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Tlie_0647 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Tlie_0658 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Tlie_0661 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Tlie_1321 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Tlie_0448 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Tlie_0446 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Tlie_0449 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Tlie_0431 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Tlie_0656 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Tlie_0665 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Tlie_0653 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Tlie_0676 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Tlie_0662 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Tlie_1420 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Tlie_0730 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Tlie_1005 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Tlie_0651 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Tlie_0648 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Tlie_0657 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Tlie_1003 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Tlie_1013 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Tlie_0654 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Tlie_0664 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Tlie_0743 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Tlie_1107 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Tlie_0443 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Tlie_0709 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Tlie_0729 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Tlie_0671 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Tlie_0769 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Tlie_0640 ribosomal protein L7AE family protein K07590 RP-L7A; large subunit ribosomal protein L7A D Tlie_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Tlie_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Tlie_R0023 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Tlie_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Tlie_R0024 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Tlie_R0021 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Tlie_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Tlie_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Tlie_R0022 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:tli03009] D Tlie_1098 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Tlie_0780 GTP-binding protein Era K03595 era; GTPase D Tlie_1002 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Tlie_0934 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D Tlie_0922 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Tlie_0867 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Tlie_0445 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Tlie_1118 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Tlie_0845 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Tlie_1112 Conserved hypothetical protein CHP00095 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Tlie_1347 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Tlie_1877 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Tlie_0970 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Tlie_0633 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Tlie_1009 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Tlie_0945 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Tlie_0915 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Tlie_0959 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Tlie_1129 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Tlie_0820 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Tlie_0935 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Tlie_1422 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Tlie_0849 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Tlie_1348 (LSU ribosomal protein L11P)-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Tlie_0630 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Tlie_0873 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Tlie_1489 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Tlie_1120 ribosome-associated GTPase EngA K03977 engA; GTPase D Tlie_0525 GTP-binding protein HSR1-related protein K14540 rbgA; ribosome biogenesis GTPase A D Tlie_0637 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Tlie_0617 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Tlie_0926 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Tlie_0921 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Tlie_0999 iojap-like protein K09710 ybeB; ribosome-associated protein D Tlie_0777 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Tlie_1178 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D Tlie_1531 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Tlie_1108 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:tli03016] D Tlie_0358 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Tlie_1172 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Tlie_1383 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Tlie_1198 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Tlie_0417 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Tlie_1603 YbaK/prolyl-tRNA synthetase associated region K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Tlie_0933 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Tlie_0702 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Tlie_0634 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Tlie_1451 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Tlie_1327 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Tlie_1255 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Tlie_1443 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Tlie_0872 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Tlie_1166 Alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Tlie_0727 Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Tlie_0903 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Tlie_0897 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Tlie_1064 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Tlie_1444 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Tlie_0733 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Tlie_0734 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Tlie_0809 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Tlie_1132 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Tlie_0618 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Tlie_1344 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Tlie_1275 tRNA (adenine-N(1)-)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D Tlie_1113 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Tlie_0680 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Tlie_0928 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Tlie_0517 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Tlie_0637 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Tlie_0876 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Tlie_0812 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Tlie_0004 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Tlie_0052 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Tlie_0710 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Tlie_R0035 RNA component of RNaseP K01978 rnpB; M1 RNA D Tlie_0427 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Tlie_0852 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Tlie_0782 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Tlie_0783 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Tlie_0300 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Tlie_1187 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Tlie_1256 dihydrouridine synthase DuS K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Tlie_1260 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Tlie_1346 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Tlie_0532 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Tlie_1421 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Tlie_0632 RNA methylase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D Tlie_1417 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D Tlie_1074 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Tlie_1905 PP-loop domain protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D Tlie_1240 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Tlie_0051 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Tlie_1028 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Tlie_1308 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Tlie_0180 4Fe-4S binding domain-containing protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Tlie_1595 4Fe-4S ferredoxin iron-sulfur binding domain protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Tlie_1274 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Tlie_0636 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Tlie_0940 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Tlie_0949 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Tlie_0599 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Tlie_0948 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Tlie_1110 protein of unknown function DUF795 K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D Tlie_0723 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:tli03012] D Tlie_0924 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Tlie_0728 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Tlie_0502 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Tlie_1183 translation elongation factor Ts K02357 tsf; elongation factor Ts D Tlie_0442 translation elongation factor Tu K02358 tuf; elongation factor Tu D Tlie_0644 translation elongation factor Tu K02358 tuf; elongation factor Tu D Tlie_0643 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Tlie_1250 translation elongation factor G K02355 fusA; elongation factor G D Tlie_1138 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D Tlie_0746 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Tlie_1181 ribosome recycling factor K02838 frr; ribosome recycling factor D Tlie_0747 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Tlie_0770 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Tlie_0670 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D Tlie_0863 translation elongation factor P (EF-P) K02356 efp; elongation factor P D Tlie_1088 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:tli03110] D Tlie_1599 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Tlie_1401 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Tlie_1067 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Tlie_0535 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Tlie_1350 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Tlie_1601 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Tlie_0601 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Tlie_1349 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Tlie_1600 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Tlie_1612 heat shock protein DnaJ domain protein K05801 djlA; DnaJ like chaperone protein D Tlie_1351 GrpE protein K03687 GRPE; molecular chaperone GrpE D Tlie_1629 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Tlie_0600 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Tlie_0716 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Tlie_0942 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Tlie_1487 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D Tlie_1176 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Tlie_1175 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Tlie_1399 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Tlie_1291 Thioredoxin domain-containing protein K03671 TXN; thioredoxin D Tlie_1246 glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3 C 04131 Membrane trafficking [BR:tli04131] D Tlie_0995 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Tlie_0755 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:tli03032] D Tlie_1549 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Tlie_1119 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Tlie_1670 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Tlie_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Tlie_1320 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Tlie_0606 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Tlie_1324 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Tlie_0753 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Tlie_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Tlie_0703 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Tlie_1082 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Tlie_0752 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Tlie_0526 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Tlie_1197 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Tlie_1254 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Tlie_0393 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Tlie_0315 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Tlie_0531 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:tli03036] D Tlie_1098 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Tlie_1119 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Tlie_1670 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Tlie_1600 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Tlie_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Tlie_1508 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Tlie_0631 condensin subunit Smc K03529 smc; chromosome segregation protein D Tlie_1131 condensin subunit ScpA K05896 scpA; segregation and condensation protein A D Tlie_1130 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B D Tlie_0982 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Tlie_1371 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein D Tlie_1015 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Tlie_0977 cell cycle protein K03588 ftsW; cell division protein FtsW D Tlie_1370 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Tlie_0983 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Tlie_0425 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Tlie_0436 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Tlie_0806 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Tlie_0624 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Tlie_0625 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Tlie_0626 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Tlie_1303 DivIVA domain protein K04074 divIVA; cell division initiation protein D Tlie_0620 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Tlie_0681 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Tlie_0621 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Tlie_0627 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Tlie_1876 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Tlie_1875 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Tlie_0004 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Tlie_1877 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Tlie_0532 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Tlie_0887 integrase family protein K04763 xerD; integrase/recombinase XerD D Tlie_1543 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Tlie_1065 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein D Tlie_0993 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:tli03400] D Tlie_1232 methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Tlie_1072 HhH-GPD family protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Tlie_0724 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Tlie_1052 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Tlie_0016 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Tlie_0757 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Tlie_0454 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D Tlie_0616 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Tlie_1254 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Tlie_1197 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Tlie_0944 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Tlie_0943 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Tlie_0898 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Tlie_1174 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Tlie_0638 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Tlie_0639 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Tlie_0675 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Tlie_0771 DEAD/DEAH box helicase domain protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Tlie_0874 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Tlie_0738 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Tlie_0875 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Tlie_0868 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Tlie_1012 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Tlie_0753 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Tlie_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Tlie_0703 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Tlie_1082 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Tlie_0752 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Tlie_1324 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Tlie_0853 RecA protein K03553 recA; recombination protein RecA D Tlie_1032 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Tlie_1031 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Tlie_1033 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Tlie_1121 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Tlie_0467 Exodeoxyribonuclease I subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D Tlie_0699 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Tlie_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Tlie_1302 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Tlie_0781 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Tlie_0917 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D Tlie_1007 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Tlie_0267 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Tlie_0393 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Tlie_0315 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Tlie_0531 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Tlie_1119 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Tlie_1670 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Tlie_1782 DNA-directed DNA polymerase K03502 umuC; DNA polymerase V D Tlie_1301 regulatory protein RecX K03565 recX; regulatory protein D Tlie_0353 PHP domain protein K02347 polX; DNA polymerase (family X) D Tlie_0706 DEAD/DEAH box helicase domain protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Tlie_0294 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Tlie_0927 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:tli03029] D Tlie_0924 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Tlie_0728 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Tlie_1183 translation elongation factor Ts K02357 tsf; elongation factor Ts D Tlie_0442 translation elongation factor Tu K02358 tuf; elongation factor Tu D Tlie_0644 translation elongation factor Tu K02358 tuf; elongation factor Tu D Tlie_0643 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Tlie_1250 translation elongation factor G K02355 fusA; elongation factor G D Tlie_0780 GTP-binding protein Era K03595 era; GTPase D Tlie_0809 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Tlie_0702 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Tlie_1443 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Tlie_1327 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Tlie_1252 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Tlie_1251 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Tlie_1253 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Tlie_1324 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Tlie_0545 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family D Tlie_1350 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Tlie_1601 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Tlie_1351 GrpE protein K03687 GRPE; molecular chaperone GrpE D Tlie_0601 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Tlie_0600 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Tlie_1349 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Tlie_0517 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Tlie_1543 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Tlie_0712 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:tli02000] D Tlie_0556 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Tlie_1738 ABC transporter, periplasmic substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D Tlie_1739 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein D Tlie_1740 ABC transporter related protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Tlie_1798 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Tlie_1799 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Tlie_1800 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Tlie_1558 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D Tlie_1556 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein D Tlie_1557 ABC transporter related protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Tlie_0482 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D Tlie_1796 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D Tlie_0483 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Tlie_0485 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Tlie_1795 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Tlie_0484 ABC transporter related protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Tlie_1794 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Tlie_0892 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D Tlie_1726 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D Tlie_1724 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein D Tlie_0894 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein D Tlie_0895 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Tlie_1723 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein D Tlie_0893 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D Tlie_1725 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D Tlie_1084 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Tlie_1086 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Tlie_1085 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Tlie_1745 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein D Tlie_1746 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein D Tlie_1747 monosaccharide ABC transporter ATP-binding protein, CUT2 family K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D Tlie_0041 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Tlie_0040 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Tlie_0039 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Tlie_0038 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Tlie_0695 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Tlie_1018 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Tlie_1335 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Tlie_0694 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Tlie_1022 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Tlie_0693 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Tlie_1021 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Tlie_1334 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Tlie_1333 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Tlie_0692 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Tlie_1020 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Tlie_0691 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Tlie_1019 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Tlie_1332 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Tlie_0352 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Tlie_0351 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Tlie_0350 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Tlie_0349 ABC transporter related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Tlie_1279 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Tlie_1752 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Tlie_1751 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Tlie_1750 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Tlie_1548 transport system permease protein K25027 btuC; cobalamin transport system permease protein D Tlie_1547 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Tlie_0154 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Tlie_0152 ABC-3 protein K09816 znuB; zinc transport system permease protein D Tlie_0153 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Tlie_1643 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Tlie_1641 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Tlie_1644 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Tlie_1640 Nickel transport complex, NikM subunit, transmembrane K10094 cbiK; nickel transport protein D Tlie_1642 hypothetical protein K16915 cbiL; nickel transport protein D Tlie_1870 BioY protein K03523 bioY; biotin transport system substrate-specific component D Tlie_0679 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Tlie_0677 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Tlie_0678 cobalt ABC transporter, ATPase subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Tlie_0552 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Tlie_0594 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Tlie_1370 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Tlie_1371 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein D Tlie_0441 ABC-type transport, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Tlie_0440 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Tlie_0274 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Tlie_1639 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Tlie_0273 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Tlie_1638 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Tlie_1242 ABC transporter related protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D Tlie_1439 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Tlie_1719 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Tlie_1849 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Tlie_0345 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D Tlie_0015 TrkA-N domain protein K10716 kch; voltage-gated potassium channel D Tlie_1623 formate/nitrite transporter K21993 fdhC; formate transporter D Tlie_1387 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D Tlie_0433 magnesium transporter K06213 mgtE; magnesium transporter D Tlie_0086 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Tlie_0082 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Tlie_1280 outer membrane transport energization protein ExbB (TC 2.C.1.1.1) K03561 exbB; biopolymer transport protein ExbB D Tlie_1278 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Tlie_1219 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D Tlie_1483 camphor resistance protein CrcB K06199 crcB; fluoride exporter D Tlie_0778 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Tlie_0066 TonB-dependent receptor plug K16092 btuB; vitamin B12 transporter D Tlie_0435 outer membrane efflux protein K12340 tolC; outer membrane protein D Tlie_1636 outer membrane efflux protein K12340 tolC; outer membrane protein D Tlie_0545 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family D Tlie_0194 microcompartments protein K27260 pduA; bacterial microcompartment shell protein D Tlie_0202 microcompartments protein K27260 pduA; bacterial microcompartment shell protein D Tlie_0472 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Tlie_1517 protein of unknown function DUF6 transmembrane K03298 TC.DME; drug/metabolite transporter, DME family D Tlie_1456 choline/carnitine/betaine transporter K05020 opuD; glycine betaine transporter D Tlie_0490 transporter, NhaC family (TC 2.A.35) K03315 nhaC; Na+:H+ antiporter, NhaC family D Tlie_1389 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D Tlie_1852 transporter, NhaC family (TC 2.A.35) K03315 nhaC; Na+:H+ antiporter, NhaC family D Tlie_1429 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D Tlie_0731 H(+)-transporting two-sector ATPase K03498 trkH; trk/ktr system potassium uptake protein D Tlie_1430 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Tlie_0732 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Tlie_0414 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family D Tlie_1693 Extracellular solute-binding protein, family 7 K11688 dctP; C4-dicarboxylate-binding protein DctP D Tlie_0220 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D Tlie_0221 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Tlie_1577 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Tlie_1540 TRAP dicarboxylate transporter, DctM subunit K21393 yiaN; TRAP-type transport system large permease protein D Tlie_1501 DctQ (C4-dicarboxylate permease, small subunit) K21394 yiaM; TRAP-type transport system small permease protein D Tlie_1541 Tripartite ATP-independent periplasmic transporter DctQ component K21394 yiaM; TRAP-type transport system small permease protein D Tlie_1730 Tripartite ATP-independent periplasmic transporter DctQ component K21394 yiaM; TRAP-type transport system small permease protein D Tlie_1505 Extracellular solute-binding protein, family 7 K21395 yiaO; TRAP-type transport system periplasmic protein D Tlie_1542 Extracellular solute-binding protein, family 7 K21395 yiaO; TRAP-type transport system periplasmic protein D Tlie_1731 TRAP dicarboxylate transporter, DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein D Tlie_1774 arsenical-resistance protein K03325 ACR3; arsenite transporter D Tlie_0477 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D Tlie_0478 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Tlie_1206 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Tlie_0479 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Tlie_0473 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Tlie_1212 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Tlie_0474 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Tlie_1211 Membrane bound hydrogenase subunit mbhB K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Tlie_0475 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Tlie_1210 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Tlie_0596 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Tlie_1828 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Tlie_1419 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins D Tlie_1676 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Tlie_1675 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D Tlie_0034 membrane protein K23675 fmnP; riboflavin transporter D Tlie_0396 proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter D Tlie_0977 cell cycle protein K03588 ftsW; cell division protein FtsW D Tlie_1277 outer membrane transport energization protein TonB (TC 2.C.1.1.1) K03832 tonB; periplasmic protein TonB D Tlie_0605 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Tlie_1479 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Tlie_0407 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Tlie_0773 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Tlie_0404 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D Tlie_0406 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Tlie_0405 sodium pump decarboxylase gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Tlie_1362 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Tlie_0436 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Tlie_0806 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Tlie_1545 FeoA family protein K04758 feoA; ferrous iron transport protein A D Tlie_1546 small GTP-binding protein K04759 feoB; ferrous iron transport protein B D Tlie_0054 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:tli02044] D Tlie_0435 outer membrane efflux protein K12340 tolC; outer membrane protein D Tlie_1636 outer membrane efflux protein K12340 tolC; outer membrane protein D Tlie_0062 hypothetical protein K02456 gspG; general secretion pathway protein G D Tlie_0857 hypothetical protein K02456 gspG; general secretion pathway protein G D Tlie_1525 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Tlie_0854 general secretory pathway protein E K02652 pilB; type IV pilus assembly protein PilB D Tlie_0856 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC D Tlie_0858 Tfp pilus assembly protein ATPase PilM-like protein K02662 pilM; type IV pilus assembly protein PilM D Tlie_0859 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Tlie_0862 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ D Tlie_0053 twitching motility protein K02669 pilT; twitching motility protein PilT D Tlie_0855 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D Tlie_0045 Pyrrolo-quinoline quinone repeat-containing protein K02674 pilY1; type IV pilus assembly protein PilY1 D Tlie_1259 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D Tlie_0795 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Tlie_1258 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC D Tlie_0081 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Tlie_0071 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Tlie_0074 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Tlie_0076 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH D Tlie_0077 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Tlie_0092 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Tlie_0100 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Tlie_0101 export protein FliQ family 3 K02420 fliQ; flagellar biosynthesis protein FliQ D Tlie_0102 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR D Tlie_1329 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Tlie_0612 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Tlie_0444 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Tlie_0613 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Tlie_0429 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Tlie_0666 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Tlie_1425 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Tlie_1080 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Tlie_0611 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Tlie_0712 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:tli02042] D Tlie_0778 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:tli02022] D Tlie_0035 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Tlie_0036 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Tlie_1485 integral membrane sensor signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Tlie_1486 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Tlie_1715 response regulator receiver and unknown domain protein K11692 K11692; two-component system, CitB family, response regulator DctR D Tlie_1888 response regulator receiver and unknown domain protein K11692 K11692; two-component system, CitB family, response regulator DctR D Tlie_1714 signal transduction histidine kinase regulating citrate/malate metabolism K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D Tlie_0084 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Tlie_0097 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Tlie_0118 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Tlie_0136 CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Tlie_0191 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN C 02035 Bacterial motility proteins [BR:tli02035] D Tlie_0084 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Tlie_0123 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Tlie_0099 CheC domain protein K03409 cheX; chemotaxis protein CheX D Tlie_0117 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Tlie_0116 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Tlie_0093 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Tlie_0118 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Tlie_0097 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Tlie_0136 CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Tlie_0120 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Tlie_0165 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Tlie_0106 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Tlie_1846 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Tlie_0076 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH D Tlie_0077 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Tlie_0100 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Tlie_0101 export protein FliQ family 3 K02420 fliQ; flagellar biosynthesis protein FliQ D Tlie_0102 type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR D Tlie_0081 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Tlie_0071 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Tlie_0075 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Tlie_0105 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Tlie_0092 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Tlie_0074 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Tlie_0113 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Tlie_0111 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Tlie_0112 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Tlie_0104 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Tlie_0073 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Tlie_0089 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Tlie_0090 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Tlie_0068 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Tlie_0091 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Tlie_0135 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Tlie_0114 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Tlie_0069 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Tlie_0110 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Tlie_0070 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Tlie_0130 flagellin domain protein K02406 fliC; flagellin D Tlie_0107 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D Tlie_0109 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Tlie_0072 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Tlie_0086 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Tlie_0082 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Tlie_0132 protein of unknown function DUF180 K13626 fliW; flagellar assembly factor FliW D Tlie_0094 GTP-binding signal recognition particle SRP54 G-domain protein K02404 flhF; flagellar biosynthesis protein FlhF D Tlie_0095 NifH/FrxC:cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D Tlie_0053 twitching motility protein K02669 pilT; twitching motility protein PilT D Tlie_0855 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D Tlie_0854 general secretory pathway protein E K02652 pilB; type IV pilus assembly protein PilB D Tlie_0856 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC D Tlie_1525 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Tlie_0862 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ D Tlie_0859 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Tlie_0858 Tfp pilus assembly protein ATPase PilM-like protein K02662 pilM; type IV pilus assembly protein PilM D Tlie_0045 Pyrrolo-quinoline quinone repeat-containing protein K02674 pilY1; type IV pilus assembly protein PilY1 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:tli04812] D Tlie_0620 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Tlie_0681 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Tlie_0983 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Tlie_0982 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Tlie_0624 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Tlie_0625 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Tlie_0626 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Tlie_1876 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Tlie_1875 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:tli04147] D Tlie_0609 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Tlie_0995 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Tlie_0996 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Tlie_0755 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Tlie_0601 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Tlie_1350 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Tlie_1601 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Tlie_1245 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Tlie_0920 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Tlie_0442 translation elongation factor Tu K02358 tuf; elongation factor Tu D Tlie_0644 translation elongation factor Tu K02358 tuf; elongation factor Tu D Tlie_1344 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Tlie_0824 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Tlie_0870 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Tlie_0667 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Tlie_0540 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Tlie_1168 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Tlie_1722 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Tlie_1318 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Tlie_0816 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Tlie_1151 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Tlie_0997 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:tli02048] D Tlie_0267 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Tlie_0247 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Tlie_0268 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2 D Tlie_0246 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Tlie_0265 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Tlie_0266 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Tlie_0260 CRISPR-associated protein, Cas6 family K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Tlie_0240 CRISPR-associated protein, Cas6 family K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Tlie_0261 CRISPR-associated protein TM1802 K19114 csh1; CRISPR-associated protein Csh1 D Tlie_0263 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2 D Tlie_0264 CRISPR-associated protein, Cas5h family K19116 cas5h; CRISPR-associated protein Cas5h D Tlie_0235 CRISPR-associated protein, Csm2 family K19138 csm2; CRISPR-associated protein Csm2 D Tlie_0236 CRISPR-associated protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3 D Tlie_0237 CRISPR-associated protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4 D Tlie_0238 CRISPR-associated RAMP protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5 D Tlie_0307 Type II site-specific deoxyribonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D Tlie_0306 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D Tlie_1266 Type III site-specific deoxyribonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5] D Tlie_1267 Site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Tlie_0287 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE D Tlie_1806 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D Tlie_0983 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Tlie_0620 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Tlie_0681 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Tlie_1198 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Tlie_0517 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:tli04090] C 01504 Antimicrobial resistance genes [BR:tli01504] D Tlie_1539 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Tlie_0436 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Tlie_0806 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Tlie_0435 outer membrane efflux protein K12340 tolC; outer membrane protein D Tlie_1636 outer membrane efflux protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:tli03100] D Tlie_R0026 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Tlie_R0057 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Tlie_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Tlie_R0050 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Tlie_R0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Tlie_R0041 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Tlie_R0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Tlie_R0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Tlie_R0013 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Tlie_R0009 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Tlie_R0012 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Tlie_R0055 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Tlie_R0020 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Tlie_R0016 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Tlie_R0056 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Tlie_R0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Tlie_R0034 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Tlie_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Tlie_R0040 tRNA-His K14226 tRNA-His; tRNA His D Tlie_R0025 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Tlie_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Tlie_R0059 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Tlie_R0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Tlie_R0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Tlie_R0058 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Tlie_R0015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Tlie_R0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Tlie_R0037 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Tlie_R0046 tRNA-Met K14230 tRNA-Met; tRNA Met D Tlie_R0031 tRNA-Met K14230 tRNA-Met; tRNA Met D Tlie_R0032 tRNA-Met K14230 tRNA-Met; tRNA Met D Tlie_R0010 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Tlie_R0043 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Tlie_R0045 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Tlie_R0053 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Tlie_R0048 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Tlie_R0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Tlie_R0051 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Tlie_R0049 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Tlie_R0004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Tlie_R0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Tlie_R0017 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Tlie_R0007 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Tlie_R0005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Tlie_R0054 tRNA-Val K14237 tRNA-Val; tRNA Val D Tlie_R0008 tRNA-Val K14237 tRNA-Val; tRNA Val D Tlie_R0033 tRNA-Val K14237 tRNA-Val; tRNA Val D Tlie_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Tlie_R0024 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Tlie_R0021 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Tlie_R0027 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Tlie_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Tlie_R0022 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Tlie_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Tlie_R0028 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Tlie_R0023 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Tlie_R0047 RNA component of signal recognition particle K01983 ffs; SRP RNA D Tlie_R0035 RNA component of RNaseP K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Tlie_0562 iron-containing alcohol dehydrogenase K19954 adh1; alcohol dehydrogenase [EC:1.1.1.-] D Tlie_0521 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Tlie_0522 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Tlie_1504 NAD/NADP octopine/nopaline dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28] D Tlie_1711 NAD/NADP octopine/nopaline dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28] D Tlie_1506 NAD/NADP octopine/nopaline dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28] D Tlie_1355 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3] D Tlie_1509 thiol peroxidase (atypical 2-Cys peroxiredoxin) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Tlie_1615 NAD(P)-dependent nickel-iron dehydrogenase catalytic subunit K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2] D Tlie_1616 Hydrogen dehydrogenase K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2] D Tlie_1466 hypothetical protein K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3] D Tlie_1619 NAD(P)-dependent iron-only hydrogenase iron-sulfur protein K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3] D Tlie_1201 NADH-ubiquinone oxidoreductase chain 49kDa K18016 mbhL; membrane-bound hydrogenase subunit alpha [EC:1.12.7.2] D Tlie_1202 NADH dehydrogenase (ubiquinone) 30 kDa subunit K18017 mbhK; membrane-bound hydrogenase subunit beta [EC:1.12.7.2] D Tlie_1203 NADH ubiquinone oxidoreductase 20 kDa subunit K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2] D Tlie_0048 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2] D Tlie_0047 Ferroxidase K02217 ftnA; ferritin [EC:1.16.3.2] D Tlie_1776 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Tlie_1460 glycine reductase complex selenoprotein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4] D Tlie_1289 glycine reductase complex selenoprotein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4] D Tlie_1288 glycine reductase complex selenoprotein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4] D Tlie_1461 glycine reductase complex selenoprotein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4] D Tlie_1193 Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2] D Tlie_1290 Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2] D Tlie_1191 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2] D Tlie_1192 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2] D Tlie_1285 fatty acid synthesis plsX protein K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4] D Tlie_1286 betaine reductase K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4] D Tlie_1459 Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits K21578 grdI; betaine reductase complex component B subunit alpha [EC:1.21.4.4] D Tlie_1457 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family K21579 grdH; betaine reductase complex component B subunit beta [EC:1.21.4.4] D Tlie_1575 glycyl-radical enzyme activating protein family K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Tlie_1339 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Tlie_1024 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Tlie_0930 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Tlie_1697 hypothetical protein K21399 ortA; 2-amino-4-ketopentanoate thiolase alpha subunit [EC:2.3.1.263] D Tlie_1696 Pyridoxal-5'-phosphate-dependent protein beta subunit K21400 ortB; 2-amino-4-ketopentanoate thiolase beta subunit [EC:2.3.1.263] D Tlie_1814 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Tlie_1345 protein of unknown function DUF43 K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128] D Tlie_1861 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D Tlie_0208 ATP/cobalamin adenosyltransferase K27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-] D Tlie_1809 DegT/DnrJ/EryC1/StrS aminotransferase K19430 epsN; pyridoxal phosphate-dependent aminotransferase EpsN [EC:2.6.1.-] D Tlie_0784 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D Tlie_0759 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Tlie_1402 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D Tlie_1608 L-carnitine dehydratase/bile acid-inducible protein F K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D Tlie_0418 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Tlie_1650 Thioesterase superfamily K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D Tlie_0520 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Tlie_0422 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Tlie_0776 7TM receptor with intracellular metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D Tlie_0635 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Tlie_1879 nuclease (SNase domain-containing protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D Tlie_0010 D-aminoacylase domain protein K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D Tlie_0879 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Tlie_1631 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Tlie_1686 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Tlie_0715 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D Tlie_0947 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Tlie_1862 ExsB family protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D Tlie_1860 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D Tlie_1763 hypothetical protein K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-] D Tlie_0259 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Tlie_0488 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D Tlie_0327 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D Tlie_0199 Diol/glycerol dehydratase reactivating factor large subunit K27264 pduG; propanediol dehydratase-reactivating factor large subunit D Tlie_0200 hypothetical protein K27265 pduH; propanediol dehydratase-reactivating factor small subunit C 99982 Energy metabolism D Tlie_1134 4Fe-4S ferredoxin iron-sulfur binding domain protein K05337 fer; ferredoxin D Tlie_0518 FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D Tlie_1209 Membrane bound hydrogenase subunit mbhD K14113 ehbD; energy-converting hydrogenase B subunit D D Tlie_0476 hypothetical protein K14113 ehbD; energy-converting hydrogenase B subunit D D Tlie_1207 Membrane bound hydrogenase subunit mbhF K14118 ehbI; energy-converting hydrogenase B subunit I C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Tlie_0204 ethanolamine utilization protein EutJ family protein K04024 eutJ; ethanolamine utilization protein EutJ D Tlie_0193 Miro domain protein K04029 eutP; ethanolamine utilization protein EutP D Tlie_0192 microcompartments protein K04031 eutS; ethanolamine utilization protein EutS D Tlie_1304 alanine racemase domain protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Tlie_1234 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D Tlie_0604 molybdopterin-guanine dinucleotide biosynthesis protein-like protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D Tlie_1743 AbgT transporter K12942 abgT; aminobenzoyl-glutamate transport protein D Tlie_0210 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K27271 pduS; cobalamin reductase C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D Tlie_0740 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Tlie_1682 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Tlie_1125 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A C 99974 Translation D Tlie_0537 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein D Tlie_0804 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Tlie_1403 UvrB/UvrC protein K19411 mcsA; protein arginine kinase activator D Tlie_1069 trigger factor K03545 tig; trigger factor D Tlie_1225 SsrA-binding protein K03664 smpB; SsrA-binding protein D Tlie_1296 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC D Tlie_1297 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Tlie_1298 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Tlie_1273 AIR synthase related protein domain protein K04655 hypE; hydrogenase expression/formation protein HypE D Tlie_1076 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Tlie_0528 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D Tlie_0700 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D Tlie_0461 protein of unknown function DUF1156 K07445 K07445; putative DNA methylase D Tlie_0063 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC D Tlie_0714 DNA-3-methyladenine glycosylase III K07457 K07457; endonuclease III related protein D Tlie_0527 Uncharacterized protein family UPF0102 K07460 yraN; putative endonuclease D Tlie_0529 DNA protecting protein DprA K04096 smf; DNA processing protein D Tlie_1519 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Tlie_0382 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Tlie_0175 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Tlie_1521 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Tlie_0341 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Tlie_0009 transposase mutator type K07493 K07493; putative transposase D Tlie_0217 transposase mutator type K07493 K07493; putative transposase D Tlie_0290 transposase mutator type K07493 K07493; putative transposase D Tlie_0340 transposase mutator type K07493 K07493; putative transposase D Tlie_0234 transposase mutator type K07493 K07493; putative transposase D Tlie_0242 transposase mutator type K07493 K07493; putative transposase D Tlie_1036 transposase mutator type K07493 K07493; putative transposase D Tlie_0719 transposase mutator type K07493 K07493; putative transposase D Tlie_1214 transposase mutator type K07493 K07493; putative transposase D Tlie_1221 transposase mutator type K07493 K07493; putative transposase D Tlie_1511 transposase mutator type K07493 K07493; putative transposase D Tlie_1532 transposase mutator type K07493 K07493; putative transposase D Tlie_0497 transposase mutator type K07493 K07493; putative transposase D Tlie_1337 transposase mutator type K07493 K07493; putative transposase D Tlie_1380 transposase mutator type K07493 K07493; putative transposase D Tlie_1392 transposase mutator type K07493 K07493; putative transposase D Tlie_1412 transposase mutator type K07493 K07493; putative transposase D Tlie_1475 transposase mutator type K07493 K07493; putative transposase D Tlie_1786 transposase mutator type K07493 K07493; putative transposase D Tlie_1830 transposase mutator type K07493 K07493; putative transposase D Tlie_1857 transposase mutator type K07493 K07493; putative transposase D Tlie_1887 transposase mutator type K07493 K07493; putative transposase D Tlie_1891 transposase mutator type K07493 K07493; putative transposase D Tlie_0342 transposase, IS605 OrfB family K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others D Tlie_0916 Uncharacterized protein family UPF0133 K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Tlie_0338 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Tlie_0698 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Tlie_1217 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Tlie_1396 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Tlie_1598 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Tlie_1832 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Tlie_0186 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Tlie_1294 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Tlie_0726 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Tlie_0271 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Tlie_1284 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Tlie_0400 YidE/YbjL duplication K07085 K07085; putative transport protein C 99978 Cell growth D Tlie_0390 hypothetical protein K07321 cooC; CO dehydrogenase maturation factor D Tlie_0713 single-stranded nucleic acid binding R3H domain-containing protein K06346 jag; spoIIIJ-associated protein D Tlie_0279 urea amidolyase related protein K06350 kipA; antagonist of KipI D Tlie_0280 Allophanate hydrolase subunit 1 K06351 kipI; inhibitor of KinA D Tlie_1445 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D Tlie_1369 Peptidase M23 K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D Tlie_1364 carbon starvation protein CstA K06200 cstA; carbon starvation protein D Tlie_1593 GTP-binding protein TypA K06207 typA; GTP-binding protein D Tlie_0775 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D Tlie_0690 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein D Tlie_1764 capsule biosynthesis protein CapC K22116 capC; gamma-polyglutamate biosynthesis protein CapC D Tlie_0275 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Tlie_1637 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Tlie_0848 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ D Tlie_0195 microcompartments protein K27263 pduB; bacterial microcompartment shell protein D Tlie_0201 microcompartments protein K27267 pduK; bacterial microcompartment shell protein D Tlie_0211 microcompartments protein K27272 pduT; bacterial microcompartment shell protein C 99994 Others D Tlie_0037 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Tlie_0987 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] B B 09194 Poorly characterized C 99996 General function prediction only D Tlie_0737 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D Tlie_1570 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein D Tlie_0325 export-related chaperone CsaA K06878 K06878; tRNA-binding protein D Tlie_0416 Patatin K07001 K07001; NTE family protein D Tlie_1632 Patatin K07001 K07001; NTE family protein D Tlie_0314 LemA family protein K03744 lemA; LemA protein D Tlie_0363 Cupin 2 conserved barrel domain protein K11312 K11312; cupin 2 domain-containing protein C 99997 Function unknown D Tlie_0516 CoA-binding domain protein K06929 K06929; uncharacterized protein D Tlie_1433 protein of unknown function DUF296 K06934 K06934; uncharacterized protein D Tlie_1878 protein of unknown function DUF296 K06934 K06934; uncharacterized protein D Tlie_0682 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Tlie_1423 hypothetical protein K06960 K06960; uncharacterized protein D Tlie_0843 peptidase membrane zinc metallopeptidase K06973 K06973; uncharacterized protein D Tlie_0058 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07005 K07005; uncharacterized protein D Tlie_1241 SufBD protein K07033 K07033; uncharacterized protein D Tlie_0455 amidohydrolase 2 K07045 K07045; uncharacterized protein D Tlie_0170 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Tlie_0512 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Tlie_0741 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Tlie_1708 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Tlie_1716 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Tlie_0330 permease K07089 K07089; uncharacterized protein D Tlie_0171 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Tlie_1432 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Tlie_1886 phosphoesterase DHHA1 K07097 K07097; uncharacterized protein D Tlie_1394 3H domain-containing protein K07105 K07105; uncharacterized protein D Tlie_0050 hypothetical protein K07112 K07112; uncharacterized protein D Tlie_1911 membrane protein AbrB duplication K07120 K07120; uncharacterized protein D Tlie_0228 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein D Tlie_0309 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K07137 K07137; uncharacterized protein D Tlie_1154 Radical SAM domain protein K07139 K07139; uncharacterized protein D Tlie_0711 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Tlie_0538 protein of unknown function DUF501 K09009 K09009; uncharacterized protein D Tlie_1342 protein of unknown function YOR215C K09117 K09117; uncharacterized protein D Tlie_0056 protein of unknown function UPF0182 K09118 K09118; uncharacterized protein D Tlie_0384 protein of unknown function DUF82 K09122 K09122; uncharacterized protein D Tlie_0697 protein of unknown function DUF355 K09129 K09129; uncharacterized protein D Tlie_1484 protein of unknown function DUF190 K09137 K09137; uncharacterized protein D Tlie_1025 AMMECR1 domain protein K09141 K09141; uncharacterized protein D Tlie_0080 protein of unknown function DUF342 K09749 K09749; uncharacterized protein D Tlie_1426 helix-turn-helix protein YlxM/p13 family protein K09787 K09787; uncharacterized protein D Tlie_1367 protein of unknown function DUF610 YibQ K09798 K09798; uncharacterized protein D Tlie_1571 hypothetical protein K07502 yprB; uncharacterized protein D Tlie_1004 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein D Tlie_0564 protein of unknown function DUF1022 K07276 K07276; uncharacterized protein D Tlie_0923 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 29, 2024