+F Chromosome and associated proteins KO
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Chromosome and Associated Proteins - Thiorhodovibrio litoralis
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AEukaryotic type
B Sister chromatid cohesion proteins
C Cohesin complex
C Adherin complex
C CTF18-RFC complex
C Fork protection complex
C Other sister chromatid cohesion factors
B Meiosis-specific proteins
C Cohesin complex and associated proteins
C Synaptonemal complex
C DSB formation-related proteins
C Others
B Nucleosome assembly factors
C Histones
C Histone chaperones
D Nucleoplasmins
D NAPs (Nucleosome assembly proteins)
D CAF-1
D FACT complex
D Other Histone chaperones and regulators
C HMG (high mobility group) proteins
B Histone modification proteins
C HATs (histone acetyltransferases)
C HAT complexes
D PCAF complex
D STAGA complex
D TFTC complex
D TIP60 complex
D HBO1 complex
D MOZ/MORF complex
D SAGA complex
D SLIK complex
D ADA-HAT complex
D HAT-A2 complex
D ATAC complex
D HATB complex
D NSL complex
E Thiosp_04827 putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
E Thiosp_04882 putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D MSL complex
D NuA3 complex
D NuA4 complex
D SAS complex
C HDACs (histone deacetylases)
D Class I HDACs
D Class II HDACs
D SIRTs (sirtuins, class III HDACs)
D Class IV HDACs
C HDAC complexes
D Sin3A-HDAC complex
D BRAF-HDAC complex
D REST complex
D SHIP complex
D MiDAC complex
D SMART complex
D Other HDAC associated proteins
C HMTs (histone methyltransferases)
D HKMTs (histone lysine methyltransferases)
D PRMTs (protein arginine metyltransferases)
C HMT complexes
D COMPASS/SET1 complex
D COMPASS/SET1 complex (yeast)
D MLL-HCF complex
D MLL3/MLL4 complex
D Dot1-containing complex
C Histone demethylases
C Polycomb repressive complex (PRC) and associated proteins
D Canonical PRC1 (PRC1.2/1.4)
E PRC1.4 specific proteins
D Noncanonical PRC1 (PRC1.1)
D Noncanonical PRC1 (PRC1.3/1.5)
D Noncanonical PRC1 (PRC1.6)
D PRC2.1
D PRC2.2
D PR-DUB complex
E Thiosp_04827 putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
E Thiosp_04882 putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Other PRC associated proteins
C Sir proteins
C Other histone modification proteins
B Chromosome condensation proteins
C Condensin I
C Condensin II
C Other regulators of chromosome condensation
B Centromeric chromatin formation proteins
C Kinetochore proteins
D Centromere proteins
D CPC (chromosomal passenger complex)
D KMN network proteins
E MIS12 complex
E NDC80 complex
D Mis6 complex
D COMA complex
D NMS complex
E NDC80 complex
E MIND kinetochore complex
D MIS16-MIS18 complex
D DASH complex
D CBF3 complex
D Others
C SAC (spindle assembly checkpoint) factors
D Core SAC proteins
D Motor proteins
E RZZ complex
E Dynein complex
D Protein kinases
D Others
C Other centromeric chromatin formation proteins
D Shugoshin
D PP2A (protein phosphatase 2A)
B Heterochromatin formation proteins
C HP1 (heterochromatin protein 1)
C MBPs (metylated DNA binding proteins)
C Other heterochromatin formation proteins
B Gene silencing
C RISC (RNA-induced silencing complex)
C piRNA pathway
C RNA interference (RNAi) pathway
D RITS (RNA-induced transcriptional silencing) complex
D RDRC (RNA-directed RNA polymerase complex)
D Other RNAi proteins
C microRNA pathway
D Microprocessor complex
E Thiosp_02595 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RISC loading complex
D Other miRNA pathway proteins
C Transposable elements
B Centrosome formation proteins
C Centriole proteins
C Pericentriolar materials (PCM)
D Centriolar satellite
D Other PCM proteins
C Cyclins
C Kinases and associated factors
D Kinase anchoring protein
C Microtubules and associated factors
D gamma-tubulin ring complex
D Other tubulins
D Dynactin complex
D BRISC complex
D Microtubule-associated proteins
C Augmin complex
C Centrosome duplication proteins
D Centriole replication proteins
D Regulators of centriole replication
D Other centrosome duplication proteins
C Nde1-Su48 complex
C LINC complex
C 3M complex
C Other centriole associated proteins
C Spindle formation proteins
B Sister chromatid separation proteins
C Securin and associated proteins
C Separase
C APC/C complex
C Aurora kinases
D Regulators of Aurora kinases
C TACC proteins
C Polo kinases
C Early mitotic inhibitors
B Chromatin remodeling factors
C BAF complex
C PBAF complex
C GBAF(ncBAF) complex
C CHRAC complex
C RSF complex
C WICH complex
C B-WICH complex
C NORC complex
C BRF complex
C NuRD complex
C NuRF complex
C NuRF complex (fruit fly)
C CERF complex
C SRCAP complex
C INO80 complex
C INO80 complex (yeast)
C RSC complex
C SWI/SNF complex
C SWR1 complex
C ASTRA complex
C Other chromatin remodeling factors
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AProkaryotic type
B Nucleoid associated proteins
C HNS (histone-like nucleoid structuring protein)
D Thiosp_02204 hypothetical protein K03746 hns; DNA-binding protein H-NS
D Thiosp_04807 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
C HU (heat unstable protein)
D Thiosp_04422 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
C IHF (integration host factor)
D Thiosp_03503 ihfA; Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D Thiosp_01540 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
C Other nucleoid associated proteins
D Thiosp_02272 cbpA; Curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D Thiosp_02271 cbpM; Chaperone modulatory protein CbpM K18997 cbpM; chaperone modulatory protein CbpM
D Thiosp_00001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Thiosp_01169 fis; Hin recombinational enhancer-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Thiosp_03777 hfq; Host factor-I protein K03666 hfq; host factor-I protein
B Chromosome partitioning proteins
C MukBEF complex
C Condensin-like complex
D Thiosp_04228 smc; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D Thiosp_04654 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D Thiosp_04653 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
C Divisome proteins
D Thiosp_04634 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Thiosp_02308 ftsB; Cell division protein FtsB K05589 ftsB; cell division protein FtsB
D Thiosp_04546 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Thiosp_04645 ftsI; Peptidoglycan synthase FtsI precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Thiosp_02748 spoIIIE; Stage III sporulation protein E K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Thiosp_03385 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Thiosp_04646 ftsL; Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D Thiosp_04635 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D Thiosp_04640 ftsW_2; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Thiosp_04545 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Thiosp_04633 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Thiosp_04229 zipA; Cell division protein ZipA K03528 zipA; cell division protein ZipA
D Thiosp_04378 zapA; Z ring-associated protein ZapA K09888 zapA; cell division protein ZapA
D Thiosp_04379 hypothetical protein K09892 zapB; cell division protein ZapB
D Thiosp_04527 zapD; Z ring-associated protein D K18778 zapD; cell division protein ZapD
D Thiosp_03780 amiC_2; N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Thiosp_00365 bepF_1; Efflux pump periplasmic linker BepF K03585 acrA; membrane fusion protein, multidrug efflux system
D Thiosp_03214 srpA_1; Solvent efflux pump periplasmic linker SrpA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D Thiosp_03303 mdtE_1; Multidrug resistance protein MdtE precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D Thiosp_04975 mdtA_3; Multidrug transporter MdtA K03585 acrA; membrane fusion protein, multidrug efflux system
C Inhibitors of FtsZ assembly
D Thiosp_00793 minC; Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Thiosp_00794 minD; Cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D Thiosp_00795 minE; Cell division topological specificity factor K03608 minE; cell division topological specificity factor
C Other chromosome partitioning proteins
D Thiosp_00216 mreB_1; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Thiosp_03053 mreB_2; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Thiosp_00217 mreC; Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Thiosp_00218 mreD; Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D Thiosp_00220 mrdB; Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Thiosp_00590 soj_1; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D Thiosp_00687 ParA-like protein K03496 parA; chromosome partitioning protein
D Thiosp_04466 ParA-like protein K03496 parA; chromosome partitioning protein
D Thiosp_04500 soj_5; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D Thiosp_00589 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Thiosp_00005 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Thiosp_00210 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Thiosp_00592 mnmG; Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Thiosp_00591 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Thiosp_02003 xerD_3; Tyrosine recombinase XerD K03733 xerC; integrase/recombinase XerC
D Thiosp_02811 xerC_6; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D Thiosp_02002 xerC_4; Tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD
D Thiosp_02388 xerD_4; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Thiosp_04816 ylxH_2; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Thiosp_04389 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 16, 2024