+D GENES KO #

  KEGG Orthology (KO) - Truepera radiovictrix

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:tra00010] D Trad_1474 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Trad_2223 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Trad_1963 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Trad_0500 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Trad_2595 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Trad_1278 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Trad_1224 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Trad_0457 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Trad_2318 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Trad_2319 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Trad_0165 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Trad_1454 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Trad_0003 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Trad_0004 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Trad_1799 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Trad_2187 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Trad_0211 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Trad_0210 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Trad_2188 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Trad_2118 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_0899 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_1539 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Trad_1794 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Trad_0212 Alcohol dehydrogenase zinc-binding domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Trad_1538 Aldehyde Dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Trad_0252 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Trad_0253 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Trad_0749 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Trad_2941 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D Trad_1360 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:tra00020] D Trad_0742 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1] D Trad_0147 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Trad_1633 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Trad_0897 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Trad_0898 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Trad_2118 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_0899 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_1258 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Trad_1259 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Trad_0357 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Trad_0358 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Trad_0355 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Trad_0356 succinate dehydrogenase, membrane subunit (SdhD) K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Trad_1860 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Trad_2990 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Trad_1360 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Trad_2187 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Trad_0211 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Trad_0210 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Trad_2188 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:tra00030] D Trad_2223 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Trad_1970 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Trad_2275 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Trad_1969 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Trad_1523 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Trad_1088 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Trad_2560 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Trad_2293 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Trad_1769 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Trad_0174 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Trad_0835 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Trad_2547 PfkB domain protein K00852 rbsK; ribokinase [EC:2.7.1.15] D Trad_0706 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D Trad_1069 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Trad_0749 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Trad_2151 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Trad_0658 carbohydrate kinase, thermoresistant glucokinase family K00851 idnK; gluconokinase [EC:2.7.1.12] D Trad_0451 Carbohydrate kinase, FGGY K25031 gntK; gluconokinase [EC:2.7.1.12] D Trad_2945 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Trad_1278 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Trad_1224 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Trad_2595 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Trad_1963 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Trad_0500 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:tra00040] D Trad_1840 Oligogalacturonide lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6] D Trad_0657 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D Trad_0663 conserved hypothetical protein K21619 uxaE; tagaturonate epimerase [EC:5.1.2.7] D Trad_2856 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Trad_1488 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D Trad_1088 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Trad_1489 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D Trad_0162 L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16] D Trad_0995 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D Trad_0997 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D Trad_2093 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Trad_2967 L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D Trad_1713 Carbohydrate kinase, FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D Trad_0996 D-lyxose ketol-isomerase K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15] D Trad_2181 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Trad_2895 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Trad_2186 Alcohol dehydrogenase zinc-binding domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Trad_2887 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Trad_0849 oxidoreductase domain protein K14273 xdh; D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) [EC:1.1.1.179] D Trad_2228 Aldehyde Dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] C 00051 Fructose and mannose metabolism [PATH:tra00051] D Trad_0766 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Trad_0183 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Trad_2871 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Trad_2860 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Trad_2967 L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D Trad_1713 Carbohydrate kinase, FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D Trad_1963 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Trad_0500 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Trad_2595 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Trad_2181 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Trad_2895 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Trad_2186 Alcohol dehydrogenase zinc-binding domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Trad_2887 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Trad_2093 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Trad_1278 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Trad_1224 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Trad_0457 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Trad_2861 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281] C 00052 Galactose metabolism [PATH:tra00052] D Trad_0853 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Trad_0989 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Trad_2575 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Trad_0749 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Trad_1474 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Trad_2037 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D Trad_1728 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D Trad_1561 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Trad_1979 glycoside hydrolase family 4 K07406 melA; alpha-galactosidase [EC:3.2.1.22] D Trad_1963 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Trad_0500 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Trad_1649 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Trad_1739 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:tra00053] D Trad_2856 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Trad_2654 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Trad_1488 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:tra00500] D Trad_1649 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Trad_1739 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Trad_1031 alpha amylase catalytic region K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4] D Trad_2092 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Trad_1441 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Trad_2732 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Trad_2194 Nucleotidyl transferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Trad_0308 glycosyl transferase group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11] D Trad_2687 alpha amylase catalytic region K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Trad_1813 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Trad_1020 alpha-1,6-glucosidase, pullulanase-type K01200 pulA; pullulanase [EC:3.2.1.41] D Trad_1442 alpha amylase catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1] D Trad_1420 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D Trad_2961 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D Trad_0604 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Trad_1421 alpha amylase catalytic region K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D Trad_0630 glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D Trad_2060 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D Trad_2079 malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D Trad_2078 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D Trad_2274 glycoside hydrolase 15-related protein K22934 E3.2.1.28; alpha,alpha-trehalase [EC:3.2.1.28] D Trad_0749 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Trad_1474 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Trad_2223 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Trad_0766 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tra00520] D Trad_0181 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Trad_1296 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Trad_0766 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Trad_0675 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Trad_1354 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Trad_2367 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Trad_1263 Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Trad_0038 transferase hexapeptide repeat containing protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Trad_0907 UTP--glucose-1-phosphate uridylyltransferase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] D Trad_0591 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Trad_1608 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Trad_0684 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Trad_1846 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Trad_0292 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] D Trad_0161 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Trad_2096 glycoside hydrolase family 43 K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Trad_1474 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Trad_2941 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D Trad_0749 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Trad_2856 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Trad_1947 NAD-dependent epimerase/dehydratase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D Trad_0853 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Trad_0989 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Trad_2575 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Trad_1561 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Trad_2654 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Trad_2223 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Trad_0183 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Trad_2871 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Trad_2860 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Trad_2861 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281] D Trad_2732 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Trad_2194 Nucleotidyl transferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:tra00620] D Trad_0252 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Trad_0253 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Trad_2187 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Trad_0211 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Trad_0210 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Trad_2188 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Trad_2118 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_0899 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_1539 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Trad_1794 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Trad_0212 Alcohol dehydrogenase zinc-binding domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Trad_1471 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Trad_1917 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Trad_0004 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Trad_1087 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Trad_1115 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Trad_1116 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Trad_1086 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Trad_1001 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Trad_1538 Aldehyde Dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Trad_1498 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D Trad_1295 FAD linked oxidase domain protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D Trad_1242 Rhodanese domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Trad_0407 beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Trad_2990 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Trad_1860 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Trad_2384 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Trad_1360 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Trad_1799 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Trad_1540 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D Trad_1984 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Trad_0207 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Trad_0208 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Trad_1388 homocitrate synthase K01655 LYS21; homocitrate synthase [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tra00630] D Trad_1541 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D Trad_0252 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Trad_0253 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Trad_1540 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D Trad_2990 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Trad_0742 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1] D Trad_0147 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Trad_1984 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Trad_1762 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Trad_1711 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Trad_0513 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Trad_1710 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Trad_1568 D-lactate dehydrogenase (cytochrome) K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Trad_1569 FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D Trad_1570 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Trad_1349 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Trad_0209 Glutamate synthase (ferredoxin) K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1] D Trad_0970 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Trad_0130 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Trad_1079 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Trad_1078 aminotransferase class V K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Trad_1081 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Trad_2118 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_0899 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_1080 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Trad_2945 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Trad_0621 dihydrodipicolinate synthetase K18123 HOGA1; 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.3.16] D Trad_2366 Kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D Trad_0622 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:tra00640] D Trad_0252 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Trad_0253 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Trad_1471 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Trad_1917 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Trad_0746 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Trad_0747 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Trad_0748 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Trad_2118 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_0899 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_0536 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Trad_2740 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Trad_1087 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Trad_1115 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Trad_1116 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Trad_1086 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Trad_1097 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_0121 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_1762 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Trad_1711 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Trad_0513 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Trad_1710 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Trad_1259 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Trad_1258 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Trad_1227 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Trad_0239 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D Trad_1223 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:tra00650] D Trad_1984 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Trad_1690 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Trad_1406 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Trad_2740 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Trad_1691 Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D Trad_0357 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Trad_0358 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Trad_0355 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Trad_0356 succinate dehydrogenase, membrane subunit (SdhD) K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Trad_1097 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_0121 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_0120 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Trad_0137 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Trad_2936 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Trad_0614 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D Trad_2000 short-chain dehydrogenase/reductase SDR K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D Trad_0204 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Trad_0205 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:tra00660] D Trad_0204 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Trad_0205 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Trad_1259 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Trad_1258 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Trad_2205 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Trad_2206 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Trad_2208 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:tra00562] D Trad_2759 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Trad_1231 oxidoreductase domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Trad_0842 oxidoreductase domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Trad_1229 Myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D Trad_1232 thiamine pyrophosphate protein central region K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D Trad_1228 Myo-inositol catabolism IolB domain protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D Trad_1225 PfkB domain protein K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D Trad_1227 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Trad_0457 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:tra00190] D Trad_2988 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Trad_2987 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Trad_2986 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Trad_2985 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Trad_2983 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Trad_2982 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Trad_2981 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Trad_2980 respiratory-chain NADH dehydrogenase subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Trad_2979 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Trad_2978 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D Trad_2977 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Trad_2976 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Trad_2975 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Trad_2974 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Trad_2758 NADH dehydrogenase (ubiquinone) K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Trad_0357 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Trad_0358 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Trad_0355 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Trad_0356 succinate dehydrogenase, membrane subunit (SdhD) K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Trad_2779 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Trad_2803 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D Trad_1496 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D Trad_2777 cytochrome c oxidase, subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9] D Trad_1495 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D Trad_2778 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D Trad_2802 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D Trad_2780 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Trad_2018 H+transporting two-sector ATPase alpha/beta subunit central region K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Trad_2017 H+transporting two-sector ATPase alpha/beta subunit central region K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Trad_2020 H+transporting two-sector ATPase C (AC39) subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Trad_2016 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Trad_2021 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Trad_2019 Vacuolar H+transporting two-sector ATPase F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D Trad_2024 V-type ATP synthase, subunit (VapC-therm) K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D Trad_2023 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Trad_2022 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Trad_2105 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D Trad_0237 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Trad_2463 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:tra00680] D Trad_0130 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Trad_1349 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Trad_2945 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Trad_0003 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Trad_2384 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Trad_2990 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Trad_1278 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Trad_1224 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Trad_2595 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Trad_1963 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Trad_0500 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Trad_1471 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Trad_1917 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Trad_0252 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Trad_0253 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Trad_1799 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Trad_0165 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Trad_1454 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Trad_0302 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Trad_2067 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] D Trad_1379 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] D Trad_1389 homoaconitate hydratase family protein K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114] D Trad_1390 3-isopropylmalate dehydratase, small subunit K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114] C 00910 Nitrogen metabolism [PATH:tra00910] D Trad_0386 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Trad_0970 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Trad_0209 Glutamate synthase (ferredoxin) K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1] D Trad_1240 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:tra00920] D Trad_0628 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein D Trad_0626 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Trad_0627 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Trad_1093 Alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D Trad_0732 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Trad_0731 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Trad_0733 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Trad_2934 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Trad_0905 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Trad_0904 nitrite and sulphite reductase 4Fe-4S region K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D Trad_1243 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Trad_1090 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Trad_2170 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Trad_1501 Rhodanese domain protein K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D Trad_1868 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Trad_2797 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Trad_2277 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Trad_0086 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:tra00061] D Trad_1087 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Trad_1115 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Trad_1116 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Trad_1086 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Trad_2794 acyl carrier protein K02078 acpP; acyl carrier protein D Trad_2792 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Trad_2622 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Trad_2791 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Trad_2795 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Trad_2793 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Trad_2167 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Trad_1872 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Trad_0313 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Trad_2823 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Trad_2440 fatty acid desaturase type 2 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D Trad_0669 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_2360 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_2949 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_0574 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:tra00071] D Trad_1984 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Trad_2771 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Trad_2739 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Trad_2740 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Trad_1406 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Trad_2322 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Trad_2950 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Trad_0057 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Trad_0669 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_2360 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_2949 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_0574 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_1539 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Trad_1794 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Trad_0212 Alcohol dehydrogenase zinc-binding domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:tra00561] D Trad_2945 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Trad_1223 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D Trad_2516 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Trad_2052 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Trad_0685 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Trad_0560 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Trad_2754 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Trad_1870 alpha/beta hydrolase fold protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D Trad_2896 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Trad_1947 NAD-dependent epimerase/dehydratase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D Trad_1979 glycoside hydrolase family 4 K07406 melA; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:tra00564] D Trad_0577 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Trad_0177 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Trad_0685 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Trad_0560 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Trad_2754 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Trad_2448 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Trad_2788 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Trad_0527 CDP-alcohol phosphatidyltransferase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:tra00600] D Trad_1979 glycoside hydrolase family 4 K07406 melA; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:tra00592] D Trad_2771 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Trad_2739 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:tra01040] D Trad_2440 fatty acid desaturase type 2 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:tra00230] D Trad_1069 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Trad_0749 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Trad_2151 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Trad_1553 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Trad_2599 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Trad_2598 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Trad_1554 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D Trad_2449 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Trad_1555 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Trad_1588 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Trad_1030 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Trad_1029 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Trad_2450 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Trad_2452 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Trad_0076 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Trad_0623 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Trad_0293 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Trad_2660 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Trad_1689 purine or other phosphorylase family 1 K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Trad_2031 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Trad_1436 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Trad_1381 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Trad_2972 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Trad_0479 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Trad_1510 molybdopterin dehydrogenase FAD-binding protein K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D Trad_1511 xanthine dehydrogenase, molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D Trad_2263 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Trad_2850 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D Trad_0323 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Trad_0077 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Trad_0107 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Trad_0106 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Trad_2260 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Trad_1011 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Trad_0740 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Trad_2827 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D Trad_1699 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D Trad_2385 metallophosphoesterase K24670 K24670; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / phosphoenolpyruvate phosphatase [EC:3.1.4.16 3.1.3.60] D Trad_1059 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Trad_2852 NUDIX hydrolase K18445 ndx1; diadenosine hexaphosphate hydrolase (ATP-forming) [EC:3.6.1.61] D Trad_0731 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Trad_0732 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Trad_1503 urate oxidase K16838 pucL; urate oxidase / 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:1.7.3.3 4.1.1.97] D Trad_1504 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D Trad_1502 OHCU decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D Trad_1505 allantoinase K01466 allB; allantoinase [EC:3.5.2.5] D Trad_1506 Cupin 2 conserved barrel domain protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D Trad_1507 amidase, hydantoinase/carbamoylase family K18151 UAH; ureidoglycolate amidohydrolase [EC:3.5.1.116] C 00240 Pyrimidine metabolism [PATH:tra00240] D Trad_2432 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Trad_0485 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Trad_0103 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Trad_1265 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Trad_0641 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Trad_0640 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Trad_2703 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D Trad_1456 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Trad_0814 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Trad_2786 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Trad_2972 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Trad_0864 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Trad_1954 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Trad_0784 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Trad_1955 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Trad_0293 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Trad_0682 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Trad_0642 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Trad_1987 Indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D Trad_2832 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D Trad_0441 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Trad_2487 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Trad_0077 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Trad_0107 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Trad_0106 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Trad_2827 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D Trad_0568 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Trad_2071 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D Trad_0036 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Trad_2385 metallophosphoesterase K24670 K24670; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / phosphoenolpyruvate phosphatase [EC:3.1.4.16 3.1.3.60] D Trad_0918 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D Trad_0920 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D Trad_0921 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Trad_1204 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:tra00250] D Trad_2971 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Trad_1759 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Trad_0502 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Trad_1349 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Trad_1960 aminotransferase class-III K00827 AGXT2; alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40] D Trad_2499 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Trad_1752 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Trad_1756 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Trad_0740 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Trad_2452 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Trad_0641 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Trad_1097 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_0121 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_0120 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Trad_0137 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Trad_0386 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Trad_1881 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D Trad_0970 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Trad_2432 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Trad_0485 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Trad_0103 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Trad_1265 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Trad_1555 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Trad_0675 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Trad_1354 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Trad_1553 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:tra00260] D Trad_0977 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Trad_0289 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Trad_2552 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Trad_2370 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Trad_2551 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Trad_0508 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Trad_0130 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Trad_1349 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Trad_2945 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Trad_0165 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Trad_1454 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Trad_0302 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Trad_1079 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Trad_1078 aminotransferase class V K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Trad_1081 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Trad_2118 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_0899 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_1080 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Trad_1960 aminotransferase class-III K00827 AGXT2; alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40] D Trad_2756 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Trad_2757 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Trad_2848 Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Trad_2330 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Trad_2329 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:tra00270] D Trad_1868 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Trad_2797 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Trad_1866 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Trad_2519 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Trad_0336 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Trad_0404 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Trad_1199 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Trad_0403 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Trad_2198 MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Trad_2031 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Trad_1396 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Trad_2517 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D Trad_1591 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Trad_0977 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Trad_0289 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Trad_2552 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Trad_2277 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Trad_0086 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Trad_2279 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Trad_2278 Cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Trad_0395 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Trad_2576 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Trad_1960 aminotransferase class-III K00827 AGXT2; alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40] D Trad_2971 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Trad_1090 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Trad_2170 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Trad_2990 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Trad_2756 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Trad_2757 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Trad_0302 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:tra00280] D Trad_0395 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Trad_2576 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Trad_0746 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Trad_0747 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Trad_0748 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Trad_2118 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_0899 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_2322 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Trad_2740 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Trad_2771 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Trad_2739 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Trad_1762 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Trad_1711 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Trad_0513 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Trad_1710 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Trad_1227 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Trad_1097 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_0121 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_1960 aminotransferase class-III K00827 AGXT2; alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40] D Trad_1575 Enoyl-CoA hydratase/isomerase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D Trad_2936 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Trad_0614 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D Trad_1984 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tra00290] D Trad_2848 Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Trad_2205 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Trad_2206 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Trad_2208 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Trad_0204 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Trad_0205 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Trad_0206 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Trad_0988 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Trad_0395 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Trad_2576 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Trad_0207 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Trad_0208 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:tra00300] D Trad_2552 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Trad_0977 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Trad_0289 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Trad_1893 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Trad_2585 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Trad_0134 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Trad_1388 homocitrate synthase K01655 LYS21; homocitrate synthase [EC:2.3.3.14] D Trad_1389 homoaconitate hydratase family protein K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114] D Trad_1390 3-isopropylmalate dehydratase, small subunit K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114] D Trad_2841 3-isopropylmalate dehydrogenase K05824 LYS12; homoisocitrate dehydrogenase [EC:1.1.1.87] D Trad_1414 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D Trad_1391 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D Trad_1392 lysine biosynthesis enzyme LysX K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43] D Trad_1399 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D Trad_1395 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D Trad_1401 acetylornithine and succinylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D Trad_1404 N-acetyl-ornithine/N-acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] D Trad_2828 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Trad_1602 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:tra00310] D Trad_0898 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Trad_2118 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_0899 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_2950 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Trad_0057 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Trad_2740 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Trad_1984 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Trad_1097 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_0121 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_0120 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Trad_0137 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Trad_0061 ornithine cyclodeaminase/mu-crystallin K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:tra00220] D Trad_0064 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Trad_1752 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Trad_1756 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Trad_2352 arginase K01476 rocF; arginase [EC:3.5.3.1] D Trad_1555 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Trad_0970 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Trad_2432 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Trad_0485 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Trad_0103 protein of unknown function DUF201 K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Trad_1265 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Trad_0386 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Trad_2971 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Trad_1757 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D Trad_0062 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Trad_0453 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Trad_0063 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Trad_1391 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D Trad_1399 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D Trad_1395 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D Trad_1401 acetylornithine and succinylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D Trad_1404 N-acetyl-ornithine/N-acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132] C 00330 Arginine and proline metabolism [PATH:tra00330] D Trad_0080 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Trad_0915 Arginase/agmatinase/formiminoglutamase K01480 speB; agmatinase [EC:3.5.3.11] D Trad_2001 Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D Trad_2002 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D Trad_0403 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Trad_0404 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Trad_1199 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Trad_1413 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Trad_1478 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Trad_1654 FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D Trad_2352 arginase K01476 rocF; arginase [EC:3.5.3.1] D Trad_1764 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Trad_1880 Proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D Trad_1881 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D Trad_0328 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Trad_1371 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Trad_2336 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Trad_2971 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Trad_0621 dihydrodipicolinate synthetase K18123 HOGA1; 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.3.16] D Trad_0841 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] D Trad_0061 ornithine cyclodeaminase/mu-crystallin K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] C 00340 Histidine metabolism [PATH:tra00340] D Trad_2737 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Trad_2736 Histidine--tRNA ligase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Trad_2596 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Trad_0437 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Trad_0083 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Trad_0438 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Trad_0378 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Trad_0439 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Trad_2259 inositol monophosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D Trad_1355 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Trad_0912 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D Trad_0916 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D Trad_0914 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:tra00350] D Trad_2971 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Trad_0378 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Trad_0439 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Trad_1539 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Trad_1794 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Trad_0212 Alcohol dehydrogenase zinc-binding domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Trad_1888 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D Trad_1890 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D Trad_1892 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D Trad_2577 4-hydroxy-2-oxovalerate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D Trad_0120 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Trad_0137 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:tra00360] D Trad_1895 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Trad_1894 phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D Trad_1145 phenylacetate-CoA oxygenase, PaaG subunit K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D Trad_1146 phenylacetic acid degradation B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D Trad_1147 phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D Trad_1148 phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D Trad_1369 Enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D Trad_1898 phenylacetic acid degradation protein paaN K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D Trad_1690 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Trad_2971 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Trad_0378 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Trad_0439 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Trad_1413 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Trad_1478 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Trad_0260 Rieske (2Fe-2S) iron-sulfur domain protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component C 00380 Tryptophan metabolism [PATH:tra00380] D Trad_2366 Kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D Trad_2365 kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D Trad_0898 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Trad_2118 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_0899 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_2950 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Trad_0057 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Trad_2740 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Trad_1984 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Trad_1413 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Trad_1478 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tra00400] D Trad_0809 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Trad_1938 phospho-2-dehydro-3-deoxyheptonate aldolase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5] D Trad_1873 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Trad_1327 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Trad_1326 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Trad_1328 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Trad_0783 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Trad_1329 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Trad_2818 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Trad_2816 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Trad_2814 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Trad_0030 N-(5'phosphoribosyl)anthranilate isomerase (PRAI) K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Trad_1002 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Trad_2330 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Trad_2329 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Trad_1724 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5] D Trad_2766 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Trad_0488 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Trad_2971 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Trad_0378 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Trad_0439 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:tra00410] D Trad_1097 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_0121 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Trad_0918 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D Trad_0920 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D Trad_0921 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Trad_1204 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D Trad_2740 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Trad_1227 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:tra00430] D Trad_2420 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Trad_2499 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Trad_0386 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Trad_1917 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Trad_1471 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D Trad_2613 beta-lactamase-like protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:tra00450] D Trad_0086 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Trad_1866 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Trad_2519 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Trad_2517 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D Trad_1108 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Trad_0732 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Trad_0274 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:tra00460] D Trad_2092 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Trad_2420 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Trad_1759 L-asparaginase, type I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Trad_0502 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Trad_0130 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:tra00470] D Trad_2439 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Trad_1576 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Trad_1555 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Trad_0481 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Trad_1604 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Trad_2213 Mandelate racemase/muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D Trad_0134 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Trad_0841 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] C 00480 Glutathione metabolism [PATH:tra00480] D Trad_2420 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Trad_1526 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D Trad_2629 glutamate--cysteine ligase GCS2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D Trad_1633 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Trad_1969 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Trad_1523 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Trad_1970 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Trad_2275 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Trad_0403 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:tra00511] D Trad_0469 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] C 00540 Lipopolysaccharide biosynthesis [PATH:tra00540] D Trad_0312 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Trad_0315 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Trad_0316 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Trad_1639 GHMP kinase domain protein K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] C 00542 O-Antigen repeat unit biosynthesis [PATH:tra00542] D Trad_0683 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tra00541] D Trad_2575 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Trad_1561 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Trad_2856 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Trad_2654 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Trad_2865 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Trad_2869 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Trad_2868 dTDP-4-dehydrorhamnose 35-epimerase related protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Trad_2867 NAD-dependent epimerase/dehydratase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Trad_0183 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Trad_2871 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Trad_2860 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Trad_2861 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281] D Trad_1263 Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Trad_0038 transferase hexapeptide repeat containing protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Trad_0684 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Trad_1846 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Trad_0292 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] C 00550 Peptidoglycan biosynthesis [PATH:tra00550] D Trad_0591 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Trad_1608 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Trad_1607 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Trad_1604 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Trad_2828 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Trad_1576 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Trad_1602 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Trad_0363 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Trad_1285 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Trad_1603 Glycosyl transferase, family 4, conserved region K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Trad_1606 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Trad_1601 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Trad_0869 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:tra00552] D Trad_0363 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Trad_1285 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Trad_0683 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Trad_1378 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Trad_0027 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Trad_2896 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:tra00543] D Trad_0683 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Trad_2830 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D Trad_2829 hypothetical protein K19295 algJ; alginate O-acetyltransferase complex protein AlgJ D Trad_2831 hypothetical protein K19296 algF; alginate O-acetyltransferase complex protein AlgF D Trad_2320 conserved hypothetical protein K19293 algX; alginate biosynthesis protein AlgX D Trad_1868 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:tra00730] D Trad_1802 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Trad_2602 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Trad_0557 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Trad_2615 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Trad_1059 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:tra00740] D Trad_0268 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Trad_0270 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Trad_2573 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Trad_0269 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Trad_1613 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Trad_0982 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:tra00750] D Trad_0015 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Trad_1125 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D Trad_2551 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Trad_2812 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Trad_2106 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:tra00760] D Trad_1985 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Trad_2660 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Trad_1689 purine or other phosphorylase family 1 K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Trad_0293 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Trad_0025 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Trad_2174 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Trad_2824 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Trad_0785 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Trad_0094 alanine dehydrogenase/PNT domain protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Trad_0095 putative NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Trad_0096 NAD(P)(+) transhydrogenase (AB-specific) K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D Trad_0120 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Trad_0137 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:tra00770] D Trad_0204 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Trad_0205 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Trad_0206 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Trad_0988 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Trad_1619 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D Trad_0325 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Trad_0554 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Trad_2562 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Trad_0173 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Trad_0395 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Trad_2576 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Trad_0918 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D Trad_0920 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D Trad_0921 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Trad_1204 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:tra00780] D Trad_2795 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Trad_2793 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Trad_2167 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Trad_1872 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Trad_0313 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Trad_2823 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Trad_1556 Glycine C-acetyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Trad_1545 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:tra00785] D Trad_2086 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Trad_2085 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Trad_2118 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_0899 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_2187 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Trad_0211 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Trad_0210 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Trad_2188 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Trad_0897 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Trad_0898 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Trad_0746 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Trad_0747 Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Trad_0748 catalytic domain of components of various dehydrogenase complexes K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Trad_1079 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Trad_1078 aminotransferase class V K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Trad_1081 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Trad_1080 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:tra00790] D Trad_0350 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Trad_0557 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Trad_1464 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Trad_1465 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Trad_1463 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Trad_1462 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Trad_2008 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Trad_0268 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Trad_0507 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D Trad_2768 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Trad_0821 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Trad_2268 molybdopterin converting factor, subunit 1 K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12] D Trad_2210 molybdenum cofactor synthesis domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Trad_2391 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Trad_0581 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:tra00670] D Trad_1119 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Trad_0130 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Trad_2598 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Trad_0076 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Trad_1701 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Trad_1081 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Trad_2519 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Trad_0036 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Trad_0622 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D Trad_0235 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D Trad_0762 conserved hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:tra00860] D Trad_1283 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Trad_1999 Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Trad_0228 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Trad_1191 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Trad_0225 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Trad_0335 Hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Trad_0227 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Trad_0226 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Trad_0222 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Trad_0221 Coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D Trad_1785 NAD(P)H dehydrogenase (quinone) K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Trad_1798 flavodoxin/nitric oxide synthase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Trad_1634 flavodoxin-like protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Trad_1480 protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Trad_1780 flavodoxin/nitric oxide synthase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Trad_0583 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D Trad_0218 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D Trad_0902 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Trad_2779 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Trad_2780 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Trad_0901 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D Trad_2234 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Trad_0380 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Trad_0376 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Trad_0379 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Trad_0381 protein of unknown function DUF105 K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90] D Trad_0382 cobalamin-5-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Trad_0375 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Trad_0377 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Trad_2146 magnesium protoporphyrin chelatase, putative K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D Trad_1155 Protein of unknown function DUF2470 K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tra00130] D Trad_2224 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Trad_0863 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D Trad_0982 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Trad_1207 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Trad_2646 o-succinylbenzoic acid (OSB) synthetase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D Trad_1930 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D Trad_0909 protein of unknown function DUF178 K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D Trad_0908 Radical SAM domain protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D Trad_0151 amidohydrolase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40] D Trad_1280 futalosine nucleosidase K11783 mqnB; futalosine hydrolase [EC:3.2.2.26] D Trad_0155 Radical SAM domain protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D Trad_1214 protein of unknown function DUF191 K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] D Trad_2395 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:tra00900] D Trad_2602 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Trad_0401 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Trad_0983 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Trad_0984 4-diphosphocytidyl-2C-methyl-D-erythritolkinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Trad_0257 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Trad_2249 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Trad_1220 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Trad_1984 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Trad_0982 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Trad_2168 isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D Trad_1112 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Trad_2870 undecaprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D Trad_2635 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:tra00906] D Trad_2248 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Trad_2193 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:tra00907] D Trad_2740 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Trad_2936 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Trad_2771 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Trad_2739 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Trad_2560 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:tra00523] D Trad_2865 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Trad_2869 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Trad_2868 dTDP-4-dehydrorhamnose 35-epimerase related protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Trad_2867 NAD-dependent epimerase/dehydratase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics [PATH:tra01055] D Trad_2342 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D Trad_2869 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:tra00946] D Trad_2092 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism D Trad_1503 urate oxidase K16838 pucL; urate oxidase / 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:1.7.3.3 4.1.1.97] C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D Trad_1658 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:tra00332] D Trad_0328 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Trad_1371 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:tra00261] D Trad_2342 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D Trad_0732 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Trad_0977 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Trad_0289 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Trad_1893 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:tra00521] D Trad_1474 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Trad_0749 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Trad_2759 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Trad_1231 oxidoreductase domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Trad_0842 oxidoreductase domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Trad_2865 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Trad_2869 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Trad_2868 dTDP-4-dehydrorhamnose 35-epimerase related protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Trad_2867 NAD-dependent epimerase/dehydratase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Trad_1474 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:tra00525] D Trad_2865 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Trad_2869 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:tra00401] D Trad_2766 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Trad_2971 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Trad_0378 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Trad_0439 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis [PATH:tra00405] D Trad_1434 phenazine biosynthesis protein PhzF family K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D Trad_2818 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Trad_2816 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Trad_2792 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Trad_2793 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Trad_2167 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Trad_1872 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Trad_2823 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Trad_2794 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:tra00999] D Trad_0336 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Trad_2092 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:tra00362] D Trad_1837 Mandelate racemase/muconate lactonizing protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D Trad_2771 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Trad_2739 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Trad_1134 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D Trad_2624 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D Trad_2740 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Trad_1406 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Trad_2950 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Trad_0057 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Trad_1690 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Trad_1984 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:tra00627] D Trad_1413 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Trad_1478 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Trad_1001 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Trad_0982 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:tra00364] D Trad_0582 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D Trad_1837 Mandelate racemase/muconate lactonizing protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00625 Chloroalkane and chloroalkene degradation [PATH:tra00625] D Trad_1539 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Trad_1794 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Trad_0212 Alcohol dehydrogenase zinc-binding domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Trad_0840 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:tra00361] D Trad_0582 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D Trad_1837 Mandelate racemase/muconate lactonizing protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D Trad_1134 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] C 00623 Toluene degradation [PATH:tra00623] D Trad_1837 Mandelate racemase/muconate lactonizing protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D Trad_0582 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:tra00622] D Trad_1134 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D Trad_2771 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Trad_2739 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:tra00643] D Trad_1413 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Trad_1478 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Trad_1134 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:tra00930] D Trad_2740 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:tra00626] D Trad_1539 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Trad_1794 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Trad_0212 Alcohol dehydrogenase zinc-binding domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:tra03020] D Trad_2476 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Trad_2475 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Trad_1066 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Trad_0324 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:tra03010] D Trad_2591 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1 D Trad_2784 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Trad_1044 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Trad_1065 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Trad_1055 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Trad_0008 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Trad_1034 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Trad_1052 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Trad_1286 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Trad_1037 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Trad_1064 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Trad_1033 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Trad_1063 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Trad_1051 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Trad_0495 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Trad_1621 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Trad_0071 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Trad_1047 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Trad_0006 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Trad_1042 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Trad_0865 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Trad_2479 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Trad_1041 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Trad_1038 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Trad_1039 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Trad_1050 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Trad_1053 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Trad_2477 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Trad_0005 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Trad_2478 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Trad_2480 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Trad_1287 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Trad_1048 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Trad_1057 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Trad_1045 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Trad_1067 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Trad_1054 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Trad_0021 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Trad_1217 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Trad_0022 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Trad_1043 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Trad_1040 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Trad_1049 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Trad_2152 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Trad_0023 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Trad_0389 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Trad_0856 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Trad_1046 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Trad_1056 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Trad_0779 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Trad_2790 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Trad_0491 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Trad_2483 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Trad_0367 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Trad_1216 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Trad_1062 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Trad_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Trad_R0003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Trad_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Trad_R0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Trad_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Trad_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:tra00970] D Trad_R0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Trad_R0029 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Trad_R0034 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Trad_R0002 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Trad_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Trad_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Trad_R0033 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Trad_R0006 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Trad_R0036 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Trad_R0049 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Trad_R0031 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Trad_R0042 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Trad_R0022 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Trad_R0013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Trad_R0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Trad_R0048 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Trad_R0044 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Trad_R0017 tRNA-His K14226 tRNA-His; tRNA His D Trad_R0053 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Trad_R0024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Trad_R0016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Trad_R0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Trad_R0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Trad_R0023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Trad_R0012 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Trad_R0052 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Trad_R0027 tRNA-Met K14230 tRNA-Met; tRNA Met D Trad_R0007 tRNA-Met K14230 tRNA-Met; tRNA Met D Trad_R0008 tRNA-Met K14230 tRNA-Met; tRNA Met D Trad_R0037 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Trad_R0028 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Trad_R0021 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Trad_R0047 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Trad_R0050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Trad_R0018 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Trad_R0035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Trad_R0019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Trad_R0046 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Trad_R0043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Trad_R0038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Trad_R0041 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Trad_R0045 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Trad_R0014 tRNA-Val K14237 tRNA-Val; tRNA Val D Trad_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val D Trad_R0030 tRNA-Val K14237 tRNA-Val; tRNA Val D Trad_1283 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Trad_1999 Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Trad_0366 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Trad_1165 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Trad_0341 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Trad_1714 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Trad_2932 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Trad_1922 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Trad_0349 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Trad_1772 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Trad_2070 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Trad_1774 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Trad_2215 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Trad_2214 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Trad_1638 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Trad_1716 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Trad_1647 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Trad_0274 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Trad_1701 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Trad_2697 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Trad_2121 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Trad_2316 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Trad_2960 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Trad_0460 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Trad_2582 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Trad_1771 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Trad_1352 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Trad_1353 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Trad_1968 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Trad_1453 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:tra03060] D Trad_1058 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Trad_2482 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Trad_2286 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Trad_1343 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D Trad_0370 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Trad_0812 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Trad_0072 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Trad_1282 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Trad_1016 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Trad_1936 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Trad_1937 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Trad_1181 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Trad_0385 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:tra04122] D Trad_1802 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Trad_1090 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Trad_2170 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Trad_2593 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Trad_2768 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Trad_2268 molybdopterin converting factor, subunit 1 K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12] D Trad_2840 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Trad_0821 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Trad_2210 molybdenum cofactor synthesis domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] C 03050 Proteasome C 03018 RNA degradation [PATH:tra03018] D Trad_0003 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Trad_1622 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Trad_0584 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Trad_0483 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Trad_2113 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Trad_2004 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Trad_0273 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Trad_2315 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Trad_2150 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Trad_1623 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D Trad_1963 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Trad_0011 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Trad_2928 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Trad_0237 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Trad_2463 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Trad_2563 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:tra03030] D Trad_0247 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Trad_1522 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Trad_2353 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Trad_2373 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Trad_1817 DNA polymerase III subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Trad_0552 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Trad_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Trad_1337 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Trad_0624 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Trad_0007 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Trad_2665 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Trad_2607 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Trad_2368 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Trad_1596 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:tra03410] D Trad_2905 HhH-GPD family protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Trad_0761 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Trad_1385 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Trad_2393 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Trad_0232 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Trad_2699 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Trad_0048 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Trad_1275 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Trad_1867 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Trad_2139 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Trad_2368 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Trad_0474 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Trad_1596 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:tra03420] D Trad_0139 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Trad_2752 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Trad_2543 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Trad_1974 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Trad_0047 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Trad_2368 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Trad_1596 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:tra03430] D Trad_0830 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Trad_2502 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Trad_0831 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Trad_0047 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Trad_0474 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Trad_0007 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Trad_2353 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Trad_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Trad_2373 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Trad_0552 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Trad_1817 DNA polymerase III subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Trad_0247 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Trad_1522 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Trad_1596 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:tra03440] D Trad_0474 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Trad_0007 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Trad_0168 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Trad_0686 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Trad_2376 recombination protein RecR K06187 recR; recombination protein RecR D Trad_0690 recA protein K03553 recA; recombination protein RecA D Trad_2149 recA protein K03553 recA; recombination protein RecA D Trad_2368 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Trad_2501 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Trad_0619 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Trad_0969 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Trad_0300 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Trad_2353 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Trad_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Trad_2373 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Trad_0552 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Trad_1817 DNA polymerase III subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Trad_0247 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Trad_1522 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Trad_1587 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:tra02010] D Trad_0628 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein D Trad_0626 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Trad_0627 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Trad_1534 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Trad_1735 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Trad_1536 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Trad_1734 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Trad_1533 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Trad_2658 ABC transporter, periplasmic binding protein, thiB subfamily K02064 thiB; thiamine transport system substrate-binding protein D Trad_2609 binding-protein-dependent transport systems inner membrane component K02063 thiP; thiamine transport system permease protein D Trad_0050 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Trad_2466 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Trad_0125 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Trad_2467 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Trad_0124 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Trad_2468 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Trad_2469 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Trad_0051 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Trad_1736 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D Trad_1738 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein D Trad_1737 ABC transporter related protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Trad_1574 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D Trad_1571 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Trad_1573 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Trad_1572 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Trad_2351 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Trad_1202 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Trad_2039 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Trad_1201 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Trad_2040 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Trad_1200 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Trad_2041 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Trad_0846 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Trad_0845 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Trad_0844 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Trad_1729 extracellular solute-binding protein family 1 K10188 lacE; lactose/L-arabinose transport system substrate-binding protein D Trad_1730 binding-protein-dependent transport systems inner membrane component K10189 lacF; lactose/L-arabinose transport system permease protein D Trad_1731 binding-protein-dependent transport systems inner membrane component K10190 lacG; lactose/L-arabinose transport system permease protein D Trad_2891 extracellular solute-binding protein family 1 K10227 smoE; polyol transport system substrate-binding protein D Trad_2892 binding-protein-dependent transport systems inner membrane component K10228 smoF; polyol transport system permease protein D Trad_2893 binding-protein-dependent transport systems inner membrane component K10229 smoG; polyol transport system permease protein D Trad_1443 extracellular solute-binding protein family 1 K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein D Trad_1444 binding-protein-dependent transport systems inner membrane component K17242 aguF; alpha-1,4-digalacturonate transport system permease protein D Trad_1445 binding-protein-dependent transport systems inner membrane component K17243 aguG; alpha-1,4-digalacturonate transport system permease protein D Trad_2298 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Trad_2300 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Trad_2299 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Trad_1801 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein D Trad_0618 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein D Trad_0617 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein D Trad_0616 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein D Trad_2102 extracellular solute-binding protein family 1 K10240 cebE; cellobiose transport system substrate-binding protein D Trad_2101 binding-protein-dependent transport systems inner membrane component K10241 cebF; cellobiose transport system permease protein D Trad_2100 binding-protein-dependent transport systems inner membrane component K10242 cebG; cellobiose transport system permease protein D Trad_1484 multiple sugar-binding periplasmic receptor ChvE precursor K10546 chvE; putative multiple sugar transport system substrate-binding protein D Trad_1486 inner-membrane translocator K10547 gguB; putative multiple sugar transport system permease protein D Trad_1485 ABC transporter related protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Trad_1597 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Trad_1698 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Trad_0602 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Trad_1696 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Trad_0603 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Trad_1697 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Trad_1695 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein D Trad_2273 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein D Trad_0298 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein D Trad_0297 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein D Trad_0296 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein D Trad_2296 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Trad_0992 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Trad_0694 ABC ribose transporter, periplasmic solute-binding protein K10439 rbsB; ribose transport system substrate-binding protein D Trad_2294 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Trad_0994 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Trad_0695 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Trad_0696 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Trad_0993 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Trad_2295 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Trad_1249 D-xylose ABC transporter, periplasmic substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D Trad_1248 inner-membrane translocator K10544 xylH; D-xylose transport system permease protein D Trad_1247 ABC transporter related protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D Trad_1140 putative secreted solute-binding lipoprotein K10559 rhaS; rhamnose transport system substrate-binding protein D Trad_1142 inner-membrane translocator K10560 rhaP; rhamnose transport system permease protein D Trad_1141 inner-membrane translocator K10561 rhaQ; rhamnose transport system permease protein D Trad_1143 ABC transporter related protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D Trad_0588 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Trad_2618 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Trad_0587 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Trad_0586 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Trad_1904 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Trad_1903 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Trad_1902 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Trad_1901 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Trad_1909 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D Trad_1910 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D Trad_1906 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein D Trad_1907 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein D Trad_1912 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein D Trad_1913 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein D Trad_1908 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Trad_1911 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Trad_2015 extracellular solute-binding protein family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein D Trad_2014 polar amino acid ABC transporter, inner membrane subunit K09970 aapQ; general L-amino acid transport system permease protein D Trad_2013 polar amino acid ABC transporter, inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein D Trad_2012 ABC transporter related protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D Trad_2357 leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_0971 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_1886 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_0646 ABC-type branched-chain amino acid transport systems periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_0571 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_2359 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Trad_0972 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Trad_1885 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Trad_0572 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Trad_1884 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Trad_0973 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Trad_0573 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Trad_2358 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Trad_2361 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Trad_0974 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Trad_0570 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Trad_0975 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Trad_0569 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Trad_2356 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Trad_1883 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Trad_1163 periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Trad_0857 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Trad_0859 ABC-3 protein K09816 znuB; zinc transport system permease protein D Trad_0858 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Trad_2557 BioY protein K03523 bioY; biotin transport system substrate-specific component D Trad_2344 ABC-2 type transporter K09696 natB; sodium transport system permease protein D Trad_2343 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Trad_1926 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Trad_1172 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Trad_1291 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Trad_0417 cytochrome c assembly protein K02195 ccmC; heme exporter protein C D Trad_0418 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B D Trad_0419 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Trad_2048 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D Trad_1008 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Trad_2047 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Trad_2180 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Trad_2844 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Trad_2379 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Trad_2540 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Trad_0774 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Trad_0773 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:tra03070] D Trad_1178 outer membrane efflux protein K12340 tolC; outer membrane protein D Trad_1343 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D Trad_2482 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Trad_2286 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Trad_1058 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Trad_0370 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Trad_0812 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Trad_1282 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Trad_0072 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Trad_1936 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Trad_1937 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:tra02020] D Trad_0557 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Trad_0224 integral membrane sensor signal transduction histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D Trad_1904 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Trad_1184 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Trad_0128 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Trad_0127 putative tricarboxylic transport membrane protein K07794 tctB; putative tricarboxylic transport membrane protein D Trad_0126 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D Trad_2780 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Trad_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Trad_0869 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Trad_2512 peptidase S8 and S53 subtilisin kexin sedolisin K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-] D Trad_2343 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Trad_2344 ABC-2 type transporter K09696 natB; sodium transport system permease protein D Trad_2406 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Trad_0970 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Trad_1984 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Trad_0712 pilin, type IV, putative K02650 pilA; type IV pilus assembly protein PilA D Trad_0713 pilin, type IV, putative K02650 pilA; type IV pilus assembly protein PilA D Trad_2770 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Trad_2673 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_1290 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_2556 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_1959 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_0639 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_0679 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_1178 outer membrane efflux protein K12340 tolC; outer membrane protein D Trad_0684 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Trad_1441 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D Trad_2352 arginase K01476 rocF; arginase [EC:3.5.3.1] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:tra02024] D Trad_1591 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Trad_2818 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Trad_2816 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Trad_0809 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Trad_1434 phenazine biosynthesis protein PhzF family K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D Trad_1415 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Trad_1418 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D Trad_1417 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D Trad_1416 ABC transporter related protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D Trad_2614 ABC transporter related protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D Trad_2357 leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_0971 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_1886 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_0646 ABC-type branched-chain amino acid transport systems periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_0571 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_2359 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Trad_0972 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Trad_1885 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Trad_0572 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Trad_1884 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Trad_0973 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Trad_0573 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Trad_2358 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Trad_2361 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Trad_0974 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Trad_0570 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Trad_0975 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Trad_0569 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Trad_2356 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Trad_1883 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Trad_0669 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_2360 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_2949 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_0574 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_2673 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_1290 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_2556 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_1959 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_0639 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_0679 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_0270 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Trad_2416 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_2287 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_0943 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_1838 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_2694 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_2912 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_0156 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_2586 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_1292 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_1718 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_1129 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_1318 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_2288 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_1852 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_0942 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_2693 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_0157 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_2587 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_1719 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_1128 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_2417 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_1317 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_1293 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_2911 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_2418 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_2289 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_1851 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_0941 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_1127 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_2910 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_0158 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_2588 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_1294 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_1720 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_2692 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_1316 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_0159 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Trad_2290 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Trad_1850 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Trad_1849 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Trad_2291 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Trad_0370 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Trad_0539 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Trad_2169 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Trad_0078 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Trad_1343 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D Trad_2482 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Trad_2286 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Trad_1058 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Trad_0812 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Trad_1282 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Trad_0072 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Trad_2512 peptidase S8 and S53 subtilisin kexin sedolisin K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:tra02030] D Trad_2296 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Trad_0992 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Trad_0694 ABC ribose transporter, periplasmic solute-binding protein K10439 rbsB; ribose transport system substrate-binding protein D Trad_2770 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY C 02040 Flagellar assembly D Trad_2957 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Trad_0003 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:tra04980] D Trad_2234 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Trad_0553 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-] D Trad_2519 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:tra01501] D Trad_0181 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Trad_0281 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Trad_0280 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Trad_1178 outer membrane efflux protein K12340 tolC; outer membrane protein D Trad_1601 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:tra01502] D Trad_1576 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Trad_2439 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Trad_1602 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Trad_1603 Glycosyl transferase, family 4, conserved region K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Trad_1606 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Trad_0869 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tra01503] D Trad_2851 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Trad_1184 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Trad_1178 outer membrane efflux protein K12340 tolC; outer membrane protein D Trad_0312 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:tra01000] C 01001 Protein kinases [BR:tra01001] D Trad_0589 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Trad_2025 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Trad_1515 PASTA domain containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Trad_2734 PASTA domain containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Trad_0266 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Trad_0551 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D Trad_0224 integral membrane sensor signal transduction histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D Trad_1589 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Trad_2065 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:tra01009] D Trad_1963 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Trad_0365 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:tra01002] D Trad_0385 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Trad_0066 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Trad_2263 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Trad_2764 peptidase C26 K07010 K07010; putative glutamine amidotransferase D Trad_1553 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Trad_0209 Glutamate synthase (ferredoxin) K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1] D Trad_0675 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Trad_1354 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Trad_2251 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124] D Trad_2566 Abortive infection protein K07052 K07052; CAAX protease family protein D Trad_1558 Abortive infection protein K07052 K07052; CAAX protease family protein D Trad_2237 Abortive infection protein K07052 K07052; CAAX protease family protein D Trad_1126 Abortive infection protein K07052 K07052; CAAX protease family protein D Trad_1981 Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D Trad_0869 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Trad_2284 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Trad_2718 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D Trad_2585 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Trad_2612 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D Trad_1060 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Trad_0680 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Trad_0456 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Trad_1122 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D Trad_0272 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D Trad_2681 Carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D Trad_2733 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Trad_1336 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Trad_0405 peptidase M50 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Trad_0281 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Trad_1184 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Trad_2512 peptidase S8 and S53 subtilisin kexin sedolisin K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-] D Trad_0539 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Trad_2169 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Trad_0078 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Trad_0248 peptidase S8 and S53 subtilisin kexin sedolisin K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-] D Trad_0593 Endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Trad_0459 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Trad_0192 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Trad_0331 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Trad_1181 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Trad_2336 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Trad_2161 alpha/beta hydrolase fold protein K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-] D Trad_1870 alpha/beta hydrolase fold protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D Trad_2548 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Trad_1359 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Trad_1658 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] D Trad_0651 peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-] D Trad_0039 Rhomboid family protein K07059 K07059; rhomboid family protein D Trad_0343 Rhomboid family protein K07059 K07059; rhomboid family protein D Trad_2073 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Trad_0502 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Trad_2420 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] C 01003 Glycosyltransferases [BR:tra01003] D Trad_1473 glycosyl transferase family 2 K22844 aglG; glucosyl-dolichyl phosphate glucuronosyltransferase [EC:2.4.1.356] D Trad_2896 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D Trad_0308 glycosyl transferase group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11] D Trad_0630 glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D Trad_1378 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Trad_0683 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Trad_1109 glycosyl transferase family 2 K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] D Trad_0951 glycosyl transferase group 1 K22908 mggS; mannosylglucosylglycerate synthase [EC:2.4.1.-] D Trad_1617 hypothetical protein K07779 CHST13; chondroitin 4-sulfotransferase 13 [EC:2.8.2.5] C 01005 Lipopolysaccharide biosynthesis proteins [BR:tra01005] D Trad_0312 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Trad_0315 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Trad_0316 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Trad_0683 Glycosyl transferase, family 4, conserved region K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tra01011] D Trad_0591 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Trad_1608 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Trad_1607 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Trad_1604 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Trad_2828 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Trad_1576 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Trad_2439 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Trad_0481 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Trad_1603 Glycosyl transferase, family 4, conserved region K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Trad_1606 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Trad_0363 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Trad_1285 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Trad_2962 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Trad_1601 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Trad_0869 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Trad_2612 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D Trad_0097 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Trad_1925 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Trad_2331 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Trad_2851 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:tra01004] D Trad_2792 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Trad_2622 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Trad_2791 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Trad_2795 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Trad_2793 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Trad_2167 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Trad_1872 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Trad_0313 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Trad_2823 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Trad_2440 fatty acid desaturase type 2 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D Trad_0252 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Trad_0253 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Trad_0614 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D Trad_0669 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_2360 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_2949 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_0574 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_2052 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Trad_0685 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Trad_0560 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Trad_2754 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:tra01008] D Trad_2342 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] C 01006 Prenyltransferases [BR:tra01006] D Trad_1112 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Trad_2870 undecaprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D Trad_2635 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Trad_2248 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Trad_2952 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Trad_2224 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Trad_2779 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:tra01007] D Trad_1283 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Trad_1999 Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Trad_2932 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Trad_1968 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Trad_1453 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Trad_1647 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Trad_0460 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Trad_0274 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Trad_2316 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Trad_2697 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Trad_2121 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Trad_2960 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Trad_1772 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Trad_1774 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Trad_2070 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Trad_1771 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Trad_2215 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Trad_2214 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Trad_1716 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Trad_2582 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Trad_1638 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Trad_1922 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Trad_0349 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Trad_1352 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Trad_1353 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Trad_2971 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Trad_0378 aminotransferase class I and II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Trad_0439 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Trad_1556 Glycine C-acetyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Trad_1866 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Trad_1960 aminotransferase class-III K00827 AGXT2; alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40] D Trad_1401 acetylornithine and succinylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D Trad_1097 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_0121 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Trad_1191 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Trad_0395 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Trad_2576 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Trad_0507 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D Trad_1349 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] C 00199 Cytochrome P450 [BR:tra00199] C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:tra03000] D Trad_0967 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D Trad_0220 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Trad_1245 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Trad_1237 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D Trad_0946 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Trad_0664 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Trad_1827 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Trad_1727 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Trad_2104 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Trad_2036 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Trad_2890 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Trad_1412 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D Trad_2415 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D Trad_2388 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Trad_1409 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D Trad_2664 regulatory protein MerR K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D Trad_0490 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Trad_0347 ferric uptake regulation protein K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D Trad_2989 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D Trad_2673 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_1290 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_2556 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_1959 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_0639 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_0679 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Trad_1652 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Trad_2663 transcriptional regulator, Crp/Fnr family K22490 ldrP; CRP/FNR family transcriptional regulator, LitR-dependent transcriptional activator D Trad_1803 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Trad_2157 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Trad_0042 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Trad_1583 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Trad_2704 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Trad_0280 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Trad_1545 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Trad_0928 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D Trad_2727 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Trad_2497 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Trad_2081 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Trad_0800 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Trad_2991 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Trad_2545 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Trad_2473 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Trad_0326 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism D Trad_2267 Negative regulator of class I heat shock protein K03705 hrcA; heat-inducible transcriptional repressor D Trad_0707 phage shock protein C, PspC K03973 pspC; phage shock protein C D Trad_0291 phage shock protein C, PspC K03973 pspC; phage shock protein C D Trad_0642 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Trad_1084 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D Trad_1598 MraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:tra03021] D Trad_1066 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Trad_2476 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Trad_2475 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Trad_0324 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Trad_2957 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Trad_1347 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Trad_1118 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Trad_2481 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Trad_2958 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA D Trad_2959 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA D Trad_2315 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:tra03019] D Trad_2670 double-stranded RNA binding domain protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D Trad_1623 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D Trad_2150 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Trad_0483 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Trad_0584 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Trad_2113 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Trad_2004 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Trad_0273 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Trad_0003 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Trad_1622 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Trad_2315 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Trad_1963 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Trad_0011 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Trad_2928 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Trad_0237 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Trad_2463 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Trad_2563 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Trad_0435 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:tra03011] D Trad_2591 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1 D Trad_2784 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Trad_1044 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Trad_1065 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Trad_1055 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Trad_0008 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Trad_1034 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Trad_1052 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Trad_1286 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Trad_1037 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Trad_1064 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Trad_1033 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Trad_1063 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Trad_1051 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Trad_0495 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Trad_1621 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Trad_0071 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Trad_1047 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Trad_0006 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Trad_1042 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Trad_0865 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Trad_2479 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Trad_1041 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Trad_1038 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Trad_1039 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Trad_1050 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Trad_1053 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Trad_0005 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Trad_2478 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Trad_2480 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Trad_2477 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Trad_1287 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Trad_1048 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Trad_1057 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Trad_1045 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Trad_1067 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Trad_1054 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Trad_0021 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Trad_1217 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Trad_0022 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Trad_1043 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Trad_1040 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Trad_1049 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Trad_0023 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Trad_0389 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Trad_0856 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Trad_1046 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Trad_1056 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Trad_0779 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Trad_2790 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Trad_0491 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Trad_2483 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Trad_0367 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Trad_1216 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Trad_1062 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Trad_2152 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Trad_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Trad_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Trad_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Trad_R0003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Trad_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Trad_R0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:tra03009] D Trad_2670 double-stranded RNA binding domain protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D Trad_0215 GTP-binding protein Era K03595 era; GTPase D Trad_0024 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Trad_1347 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Trad_1118 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Trad_2481 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Trad_2546 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Trad_0201 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Trad_1853 rRNA (guanine-N(2)-)-methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Trad_0810 Protein of unknown function methylase putative K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Trad_1341 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Trad_2993 glucose inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Trad_1599 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Trad_0141 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Trad_1101 protein of unknown function DUF548 K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D Trad_1614 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Trad_0035 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Trad_1869 rRNA (guanine-N(2)-)-methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Trad_1186 methyltransferase small K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Trad_2730 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Trad_2165 (Uracil-5)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Trad_1435 RNA-binding S4 domain protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Trad_2053 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Trad_0838 GCN5-related N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D Trad_0069 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Trad_2010 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Trad_1339 ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Trad_1924 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Trad_2113 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Trad_1700 ribosome-associated GTPase EngA K03977 engA; GTPase D Trad_1986 GTP-binding proten HflX K03665 hflX; GTPase D Trad_1028 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Trad_1011 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Trad_1383 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Trad_1348 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Trad_0487 RNA-binding S4 domain protein K14761 rlbA; ribosome-associated protein D Trad_0028 iojap-like protein K09710 ybeB; ribosome-associated protein D Trad_0443 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Trad_0041 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D Trad_2555 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Trad_2789 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:tra03016] D Trad_0756 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Trad_1283 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Trad_1999 Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Trad_2582 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Trad_2316 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Trad_2121 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Trad_0274 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Trad_2932 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Trad_0460 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Trad_2960 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Trad_1772 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Trad_1922 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Trad_0349 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Trad_1774 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Trad_1638 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Trad_1716 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Trad_1647 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Trad_2697 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Trad_1771 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Trad_1352 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Trad_1353 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Trad_1968 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Trad_1453 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Trad_1273 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Trad_2735 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Trad_2035 putative methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Trad_0822 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Trad_2498 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Trad_2604 tRNA pseudouridine synthase D TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Trad_1802 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Trad_1028 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Trad_2952 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Trad_1190 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Trad_2994 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Trad_0733 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Trad_0368 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Trad_R0025 RNA component of RNaseP K01978 rnpB; M1 RNA D Trad_0480 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Trad_0953 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Trad_1306 conserved hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Trad_2215 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Trad_2214 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Trad_2070 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Trad_2597 TIM-barrel protein, yjbN family K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D Trad_2285 dihydrouridine synthase DuS K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Trad_2407 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Trad_0868 RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D Trad_2652 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Trad_0068 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Trad_2091 tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D Trad_0757 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Trad_0388 putative RNA methylase K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256] D Trad_2172 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family D Trad_2741 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family D Trad_2593 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Trad_1709 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D Trad_2528 Queuosine biosynthesis protein K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Trad_1766 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Trad_1076 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Trad_0318 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Trad_1854 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Trad_0320 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Trad_0483 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Trad_1622 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Trad_0837 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:tra03012] D Trad_1345 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Trad_1215 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Trad_1779 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Trad_2785 translation elongation factor Ts K02357 tsf; elongation factor Ts D Trad_1036 translation elongation factor Tu K02358 tuf; elongation factor Tu D Trad_2484 translation elongation factor Tu K02358 tuf; elongation factor Tu D Trad_1035 translation elongation factor G K02355 fusA; elongation factor G D Trad_0645 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Trad_2787 ribosome recycling factor K02838 frr; ribosome recycling factor D Trad_0384 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Trad_2153 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Trad_1061 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Trad_1114 translation elongation factor P K02356 efp; elongation factor P D Trad_1705 conserved hypothetical protein K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:tra03110] D Trad_0176 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Trad_2216 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Trad_0592 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Trad_2074 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Trad_0011 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Trad_2928 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Trad_2355 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Trad_1408 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ D Trad_0013 heat shock protein DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Trad_0555 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Trad_0012 GrpE protein K03687 GRPE; molecular chaperone GrpE D Trad_2471 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Trad_2918 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Trad_2953 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Trad_2929 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Trad_1184 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107] D Trad_2733 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Trad_1336 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Trad_0539 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Trad_2169 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Trad_0078 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D Trad_0248 peptidase S8 and S53 subtilisin kexin sedolisin K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-] D Trad_2130 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Trad_0014 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Trad_0150 thioredoxin K03671 TXN; thioredoxin D Trad_2969 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D Trad_0413 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:tra04131] D Trad_2972 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Trad_1016 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Trad_0469 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D Trad_2318 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Trad_0004 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:tra03032] D Trad_2665 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Trad_2755 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Trad_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Trad_1337 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Trad_0624 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Trad_0007 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Trad_2353 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Trad_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Trad_0552 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Trad_1817 DNA polymerase III subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Trad_0247 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Trad_1522 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Trad_2373 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Trad_2607 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Trad_2368 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Trad_1596 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Trad_1931 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Trad_1373 DNA topoisomerase (ATP-hydrolyzing) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Trad_2377 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:tra03036] D Trad_2670 double-stranded RNA binding domain protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D Trad_2755 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Trad_0013 heat shock protein DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Trad_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Trad_0352 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein D Trad_2388 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Trad_1546 SMC domain protein K03529 smc; chromosome segregation protein D Trad_2076 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Trad_1313 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B D Trad_1610 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Trad_2379 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Trad_1601 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Trad_2874 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Trad_1609 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ D Trad_1605 cell cycle protein K03588 ftsW; cell division protein FtsW D Trad_2844 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Trad_1611 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Trad_1767 AFG1-family ATPase K06916 zapE; cell division protein ZapE D Trad_2851 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Trad_0503 Septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC D Trad_0046 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Trad_0045 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Trad_2662 DivIVA domain protein K04074 divIVA; cell division initiation protein D Trad_0317 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins D Trad_2992 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Trad_2991 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Trad_2994 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Trad_2993 glucose inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Trad_2652 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Trad_1525 integrase family protein K03733 xerC; integrase/recombinase XerC D Trad_1811 integrase family protein K04763 xerD; integrase/recombinase XerD D Trad_2261 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:tra03400] D Trad_R0039 DNA photolyase FAD-binding protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Trad_1301 DNA photolyase FAD-binding protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Trad_2393 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Trad_1385 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Trad_2905 HhH-GPD family protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Trad_0761 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Trad_1871 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Trad_0644 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Trad_0099 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Trad_2068 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Trad_1275 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Trad_1867 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Trad_2699 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Trad_0048 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Trad_0232 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Trad_2139 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Trad_1374 Deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D Trad_0474 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Trad_1596 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Trad_2368 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Trad_2752 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Trad_2543 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Trad_1974 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Trad_0047 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Trad_2476 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Trad_2475 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Trad_1066 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Trad_0324 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Trad_0139 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Trad_0830 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Trad_2502 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Trad_0831 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Trad_2353 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Trad_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Trad_0552 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Trad_1817 DNA polymerase III subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Trad_0247 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Trad_1522 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Trad_2373 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Trad_0007 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Trad_0690 recA protein K03553 recA; recombination protein RecA D Trad_2149 recA protein K03553 recA; recombination protein RecA D Trad_2501 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Trad_0619 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Trad_0969 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Trad_1587 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Trad_1105 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Trad_1104 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 D Trad_2217 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Trad_0168 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Trad_0300 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Trad_0686 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Trad_2376 recombination protein RecR K06187 recR; recombination protein RecR D Trad_2937 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Trad_0019 UvrD/REP helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D Trad_0018 conserved hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Trad_0429 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Trad_2305 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Trad_1672 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Trad_1931 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Trad_1373 DNA topoisomerase (ATP-hydrolyzing) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Trad_2377 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Trad_2755 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Trad_2004 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Trad_0273 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Trad_0331 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Trad_1928 regulatory protein RecX K03565 recX; regulatory protein D Trad_2485 PHP domain protein K02347 polX; DNA polymerase (family X) D Trad_0598 type III restriction protein res subunit K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Trad_1612 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D Trad_0077 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Trad_0107 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Trad_0106 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Trad_2934 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:tra03029] D Trad_1345 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Trad_1215 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Trad_2785 translation elongation factor Ts K02357 tsf; elongation factor Ts D Trad_1036 translation elongation factor Tu K02358 tuf; elongation factor Tu D Trad_2484 translation elongation factor Tu K02358 tuf; elongation factor Tu D Trad_1035 translation elongation factor G K02355 fusA; elongation factor G D Trad_2549 beta-lactamase domain protein K16639 LACTB2; endoribonuclease LACTB2 [EC:3.1.27.-] D Trad_0215 GTP-binding protein Era K03595 era; GTPase D Trad_1968 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Trad_2121 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Trad_1772 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Trad_0460 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Trad_0366 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Trad_1165 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Trad_0341 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Trad_1714 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Trad_0007 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Trad_2659 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family D Trad_0011 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Trad_0012 GrpE protein K03687 GRPE; molecular chaperone GrpE D Trad_2928 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Trad_2929 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Trad_2355 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Trad_1408 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ D Trad_1802 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Trad_2261 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Trad_2779 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Trad_2780 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Trad_0370 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Trad_2776 conserved hypothetical protein K14998 SURF1; surfeit locus 1 family protein D Trad_0286 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:tra02000] D Trad_2540 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Trad_0774 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Trad_0773 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Trad_0638 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Trad_2350 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Trad_0310 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Trad_0505 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Trad_0506 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Trad_0628 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein D Trad_0626 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein D Trad_0627 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Trad_1534 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Trad_1735 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Trad_1536 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Trad_1734 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Trad_1533 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Trad_2658 ABC transporter, periplasmic binding protein, thiB subfamily K02064 thiB; thiamine transport system substrate-binding protein D Trad_2609 binding-protein-dependent transport systems inner membrane component K02063 thiP; thiamine transport system permease protein D Trad_0050 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Trad_2466 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Trad_0125 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Trad_2467 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Trad_0124 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Trad_2468 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Trad_2469 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Trad_0051 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Trad_1415 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Trad_1418 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D Trad_1417 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D Trad_1416 ABC transporter related protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D Trad_2614 ABC transporter related protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D Trad_1736 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein D Trad_1738 binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein D Trad_1737 ABC transporter related protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D Trad_1574 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D Trad_1571 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Trad_1573 binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein D Trad_1572 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Trad_0925 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Trad_0923 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Trad_0924 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Trad_2255 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Trad_0922 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Trad_2351 ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Trad_1202 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Trad_2039 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Trad_1201 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Trad_2040 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Trad_1200 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Trad_2041 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Trad_0846 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Trad_0845 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Trad_0844 binding-protein-dependent transport systems inner membrane component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Trad_0298 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein D Trad_0297 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein D Trad_0296 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein D Trad_1801 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein D Trad_0618 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein D Trad_0617 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein D Trad_0616 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein D Trad_2102 extracellular solute-binding protein family 1 K10240 cebE; cellobiose transport system substrate-binding protein D Trad_2101 binding-protein-dependent transport systems inner membrane component K10241 cebF; cellobiose transport system permease protein D Trad_2100 binding-protein-dependent transport systems inner membrane component K10242 cebG; cellobiose transport system permease protein D Trad_1729 extracellular solute-binding protein family 1 K10188 lacE; lactose/L-arabinose transport system substrate-binding protein D Trad_1730 binding-protein-dependent transport systems inner membrane component K10189 lacF; lactose/L-arabinose transport system permease protein D Trad_1731 binding-protein-dependent transport systems inner membrane component K10190 lacG; lactose/L-arabinose transport system permease protein D Trad_1443 extracellular solute-binding protein family 1 K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein D Trad_1444 binding-protein-dependent transport systems inner membrane component K17242 aguF; alpha-1,4-digalacturonate transport system permease protein D Trad_1445 binding-protein-dependent transport systems inner membrane component K17243 aguG; alpha-1,4-digalacturonate transport system permease protein D Trad_2298 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein D Trad_2300 binding-protein-dependent transport systems inner membrane component K17319 lplB; putative aldouronate transport system permease protein D Trad_2299 binding-protein-dependent transport systems inner membrane component K17320 lplC; putative aldouronate transport system permease protein D Trad_1249 D-xylose ABC transporter, periplasmic substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D Trad_1248 inner-membrane translocator K10544 xylH; D-xylose transport system permease protein D Trad_1247 ABC transporter related protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D Trad_1484 multiple sugar-binding periplasmic receptor ChvE precursor K10546 chvE; putative multiple sugar transport system substrate-binding protein D Trad_1486 inner-membrane translocator K10547 gguB; putative multiple sugar transport system permease protein D Trad_1485 ABC transporter related protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Trad_1140 putative secreted solute-binding lipoprotein K10559 rhaS; rhamnose transport system substrate-binding protein D Trad_1142 inner-membrane translocator K10560 rhaP; rhamnose transport system permease protein D Trad_1141 inner-membrane translocator K10561 rhaQ; rhamnose transport system permease protein D Trad_1143 ABC transporter related protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D Trad_2296 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Trad_0992 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Trad_0694 ABC ribose transporter, periplasmic solute-binding protein K10439 rbsB; ribose transport system substrate-binding protein D Trad_2294 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Trad_0994 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Trad_0695 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Trad_0696 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Trad_0993 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Trad_2295 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Trad_0588 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Trad_2618 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Trad_0587 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Trad_0586 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Trad_2891 extracellular solute-binding protein family 1 K10227 smoE; polyol transport system substrate-binding protein D Trad_2892 binding-protein-dependent transport systems inner membrane component K10228 smoF; polyol transport system permease protein D Trad_2893 binding-protein-dependent transport systems inner membrane component K10229 smoG; polyol transport system permease protein D Trad_1597 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Trad_1698 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Trad_0602 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Trad_1696 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Trad_0603 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Trad_1697 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Trad_1695 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein D Trad_2273 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein D Trad_2879 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Trad_1978 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Trad_2182 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Trad_0947 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Trad_1529 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Trad_2441 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Trad_0719 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Trad_1830 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Trad_2282 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Trad_0465 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Trad_1976 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Trad_0466 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Trad_0948 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Trad_0720 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Trad_1829 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Trad_2620 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Trad_1530 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Trad_2442 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Trad_2183 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Trad_2878 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Trad_0467 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Trad_0949 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Trad_0721 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Trad_1828 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Trad_2619 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Trad_1531 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Trad_2443 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Trad_2184 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Trad_1977 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Trad_2877 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Trad_2281 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Trad_1236 sugar ABC transporter K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D Trad_1235 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein D Trad_1234 ABC transporter related protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D Trad_1904 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Trad_1903 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Trad_1902 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Trad_1901 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Trad_1909 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D Trad_1910 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D Trad_1906 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein D Trad_1907 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein D Trad_1912 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein D Trad_1913 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein D Trad_1908 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Trad_1911 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Trad_2015 extracellular solute-binding protein family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein D Trad_2014 polar amino acid ABC transporter, inner membrane subunit K09970 aapQ; general L-amino acid transport system permease protein D Trad_2013 polar amino acid ABC transporter, inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein D Trad_2012 ABC transporter related protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D Trad_2357 leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_0971 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_1886 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_0646 ABC-type branched-chain amino acid transport systems periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_0571 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Trad_2359 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Trad_0972 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Trad_1885 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Trad_0572 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Trad_1884 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Trad_0973 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Trad_0573 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Trad_2358 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Trad_2361 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Trad_0974 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Trad_0570 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Trad_0975 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Trad_0569 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Trad_2356 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Trad_1883 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Trad_2435 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Trad_2436 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Trad_2416 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_2287 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_0943 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_1838 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_2694 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_2912 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_0156 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_2586 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_1292 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_1718 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_1129 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_1318 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Trad_2288 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_1852 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_0942 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_2693 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_0157 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_2587 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_1719 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_1128 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_2417 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_1317 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_1293 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_2911 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Trad_2418 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_2289 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_1851 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_0941 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_1127 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_2910 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_0158 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_2588 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_1294 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_1720 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_2692 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_1316 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Trad_0159 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Trad_2290 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Trad_1850 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Trad_1849 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Trad_2291 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Trad_1152 transport system permease protein K25288 fhuB; ferric hydroxamate/heme transport system permease protein D Trad_1151 transport system permease protein K25289 fhuG; ferric hydroxamate/heme transport system permease protein D Trad_0345 ABC transporter related protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16] D Trad_0110 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein D Trad_1158 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein D Trad_0111 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein D Trad_0112 transport system permease protein K25133 hmuU; heme transport system permease protein D Trad_1157 transport system permease protein K25133 hmuU; heme transport system permease protein D Trad_0113 ABC transporter related protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D Trad_1156 ABC transporter related protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D Trad_1163 periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Trad_1153 periplasmic binding protein K25109 sirA; iron-siderophore transport system substrate-binding protein D Trad_2232 conserved hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Trad_2233 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Trad_1160 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Trad_0383 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Trad_0671 transport system permease protein K25027 btuC; cobalamin transport system permease protein D Trad_0857 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Trad_0859 ABC-3 protein K09816 znuB; zinc transport system permease protein D Trad_0858 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Trad_0769 ABC-3 protein K09819 ABC.MN.P; manganese/iron transport system permease protein D Trad_0768 ABC transporter related protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein D Trad_2557 BioY protein K03523 bioY; biotin transport system substrate-specific component D Trad_2258 YKOF domain protein K24620 ykoF; energy-coupling factor transport system substrate-specific component D Trad_2048 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D Trad_1008 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Trad_2047 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Trad_2180 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Trad_2344 ABC-2 type transporter K09696 natB; sodium transport system permease protein D Trad_2343 ABC transporter related protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Trad_1926 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Trad_1172 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Trad_1291 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Trad_0417 cytochrome c assembly protein K02195 ccmC; heme exporter protein C D Trad_0418 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B D Trad_0419 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Trad_2844 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Trad_2379 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Trad_1324 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Trad_0478 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Trad_0826 ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Trad_0579 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Trad_1323 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Trad_0477 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Trad_0578 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Trad_1967 peptidase S15 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Trad_1013 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Trad_0825 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Trad_1019 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Trad_1989 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Trad_1565 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Trad_1170 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Trad_0752 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Trad_1071 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Trad_1070 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Trad_1991 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Trad_1566 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Trad_0753 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Trad_1168 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Trad_0808 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Trad_1012 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Trad_0265 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D Trad_1581 sodium/hydrogen exchanger K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 D Trad_0828 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Trad_1920 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Trad_1635 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Trad_0620 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Trad_2970 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Trad_0655 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D Trad_2171 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D Trad_2520 major facilitator superfamily MFS_1 K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D Trad_0811 major facilitator superfamily MFS_1 K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter D Trad_2902 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D Trad_0580 major facilitator superfamily MFS_1 K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D Trad_2155 major intrinsic protein K09873 TIP; aquaporin TIP D Trad_0565 Ion transport protein K10716 kch; voltage-gated potassium channel D Trad_2405 ammonium transporter K03320 amt; ammonium transporter, Amt family D Trad_0462 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog D Trad_2145 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog D Trad_2176 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D Trad_1706 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Trad_2051 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D Trad_0359 magnesium transporter K06213 mgtE; magnesium transporter D Trad_0852 magnesium transporter K06213 mgtE; magnesium transporter D Trad_2383 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Trad_2382 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Trad_0081 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter D Trad_1579 Camphor resistance CrcB protein K06199 crcB; fluoride exporter D Trad_1580 Camphor resistance CrcB protein K06199 crcB; fluoride exporter D Trad_2825 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Trad_1178 outer membrane efflux protein K12340 tolC; outer membrane protein D Trad_2659 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family D Trad_1751 protein of unknown function DUF6 transmembrane K03298 TC.DME; drug/metabolite transporter, DME family D Trad_1499 L-lactate permease K03303 lutP; lactate permease D Trad_2429 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter D Trad_0255 putative sodium symporter protein K14393 actP; cation/acetate symporter D Trad_2550 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter D Trad_2147 sodium/hydrogen exchanger K03316 nhaP; Na+:H+ antiporter D Trad_2672 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter D Trad_0242 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D Trad_0245 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Trad_0133 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Trad_0241 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Trad_0244 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Trad_2419 Chromate transporter K07240 chrA; chromate transporter D Trad_1241 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D Trad_1016 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Trad_1509 Bile acid:sodium symporter K03325 ACR3; arsenite transporter D Trad_2680 multisubunit sodium/proton antiporter, MrpA subunit (2.A.63.1) K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D Trad_2679 multisubunit sodium/proton antiporter, MrpB subunit (2.A.63.1) K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D Trad_1683 multisubunit sodium/proton antiporter, MrpC subunit (2.A.63.1) K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Trad_1746 multisubunit sodium/proton antiporter, MrpC subunit (2.A.63.1) K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Trad_2678 multisubunit sodium/proton antiporter, MrpC subunit (2.A.63.1) K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Trad_2677 multisubunit sodium/proton antiporter, MrpD subunit (2.A.63.1) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Trad_1685 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Trad_2676 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Trad_1678 multisubunit sodium/proton antiporter, MrpE subunit (2.A.63.1) K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Trad_1744 multisubunit sodium/proton antiporter, MrpE subunit (2.A.63.1) K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Trad_2675 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Trad_1679 multisubunit sodium/proton antiporter, MrpF subunit (2.A.63.1) K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Trad_1750 multisubunit sodium/proton antiporter, MrpF subunit (2.A.63.1) K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Trad_2674 multisubunit sodium/proton antiporter, MrpG subunit (2.A.63.1) K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Trad_1680 multisubunit sodium/proton antiporter, MrpG subunit (2.A.63.1) K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Trad_1749 multisubunit sodium/proton antiporter, MrpG subunit (2.A.63.1) K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Trad_2962 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Trad_1297 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins D Trad_0128 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein D Trad_0127 putative tricarboxylic transport membrane protein K07794 tctB; putative tricarboxylic transport membrane protein D Trad_0126 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D Trad_2458 protein of unknown function DUF165 K09125 yhhQ; queuosine precursor transporter D Trad_1966 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein D Trad_1605 cell cycle protein K03588 ftsW; cell division protein FtsW D Trad_0420 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Trad_0410 Rieske (2Fe-2S) iron-sulfur domain protein K08355 aoxA; arsenite oxidase small subunit [EC:1.20.2.1 1.20.9.1] D Trad_0414 cytochrome c assembly protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF D Trad_0851 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D Trad_1504 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D Trad_0873 copper resistance D domain protein K07245 pcoD; copper resistance protein D D Trad_0874 copper resistance protein CopC K07156 copC; copper resistance protein C D Trad_0870 copper resistance protein CopC K07156 copC; copper resistance protein C C 02044 Secretion system [BR:tra02044] D Trad_1178 outer membrane efflux protein K12340 tolC; outer membrane protein D Trad_0066 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Trad_0712 pilin, type IV, putative K02650 pilA; type IV pilus assembly protein PilA D Trad_0713 pilin, type IV, putative K02650 pilA; type IV pilus assembly protein PilA D Trad_2338 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Trad_0763 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC D Trad_1334 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Trad_1333 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Trad_1332 General secretion pathway protein M K02664 pilO; type IV pilus assembly protein PilO D Trad_2339 twitching motility protein K02669 pilT; twitching motility protein PilT D Trad_2127 twitching motility protein K02669 pilT; twitching motility protein PilT D Trad_0549 Soluble ligand binding domain protein K02237 comEA; competence protein ComEA D Trad_0550 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Trad_0812 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Trad_1343 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D Trad_2482 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Trad_2286 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Trad_1058 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Trad_0072 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Trad_1282 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Trad_0370 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Trad_1936 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Trad_1937 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:tra02042] D Trad_2825 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Trad_0562 channel protein, hemolysin III family K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:tra02022] D Trad_0224 integral membrane sensor signal transduction histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D Trad_1589 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Trad_2065 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Trad_0585 response regulator receiver protein K02483 K02483; two-component system, OmpR family, response regulator D Trad_2770 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY C 02035 Bacterial motility proteins [BR:tra02035] D Trad_2770 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Trad_2339 twitching motility protein K02669 pilT; twitching motility protein PilT D Trad_2127 twitching motility protein K02669 pilT; twitching motility protein PilT D Trad_0712 pilin, type IV, putative K02650 pilA; type IV pilus assembly protein PilA D Trad_0713 pilin, type IV, putative K02650 pilA; type IV pilus assembly protein PilA D Trad_2338 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Trad_0763 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC D Trad_0066 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Trad_1332 General secretion pathway protein M K02664 pilO; type IV pilus assembly protein PilO D Trad_1333 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Trad_1334 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM C 03037 Cilium and associated proteins [BR:tra03037] D Trad_1581 sodium/hydrogen exchanger K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 C 04812 Cytoskeleton proteins [BR:tra04812] D Trad_0317 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins D Trad_1611 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Trad_1610 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Trad_0503 Septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC D Trad_0046 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Trad_0045 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Trad_2992 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Trad_2991 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:tra04147] D Trad_0003 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Trad_2318 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Trad_2319 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Trad_0004 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Trad_2284 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Trad_2928 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Trad_0011 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Trad_2223 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Trad_1381 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Trad_1036 translation elongation factor Tu K02358 tuf; elongation factor Tu D Trad_2484 translation elongation factor Tu K02358 tuf; elongation factor Tu D Trad_2735 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Trad_0669 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_2360 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_2949 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_0574 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Trad_1984 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Trad_1059 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Trad_0623 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Trad_1756 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Trad_1752 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Trad_0921 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Trad_0853 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Trad_2687 alpha amylase catalytic region K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Trad_2516 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Trad_0970 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Trad_0225 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Trad_0557 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Trad_0302 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Trad_0076 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Trad_2118 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_0899 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Trad_0179 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Trad_1970 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Trad_2275 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Trad_0457 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:tra02048] D Trad_0429 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Trad_2305 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Trad_1672 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Trad_0428 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Trad_1673 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Trad_2304 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Trad_2312 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Trad_1659 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Trad_1671 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Trad_0432 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Trad_1661 CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1 D Trad_1662 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2 D Trad_1660 CRISPR-associated protein Cas5 family K19119 cas5d; CRISPR-associated protein Cas5d D Trad_2310 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA D Trad_2309 CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB D Trad_2308 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC D Trad_2307 CRISPR-associated protein Cas5 family K19125 casD; CRISPR system Cascade subunit CasD D Trad_2306 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE D Trad_1663 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1 D Trad_1447 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1 D Trad_1448 CRISPR-associated protein, Crm2 family K19076 cmr2; CRISPR-associated protein Cmr2 D Trad_1664 CRISPR-associated protein, Crm2 family K19076 cmr2; CRISPR-associated protein Cmr2 D Trad_1449 CRISPR-associated protein, Cmr3 family K09127 cmr3; CRISPR-associated protein Cmr3 D Trad_1665 CRISPR-associated protein, Cmr3 family K09127 cmr3; CRISPR-associated protein Cmr3 D Trad_1666 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4 D Trad_1450 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4 D Trad_1451 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5 D Trad_1667 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5 D Trad_1668 CRISPR-associated RAMP protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6 D Trad_1452 CRISPR-associated RAMP protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6 D Trad_0637 type I restriction-modification system methyltransferase subunit-like protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Trad_1508 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D Trad_0999 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Trad_0998 conserved hypothetical protein K26989 mazE9; antitoxin MazE9 D Trad_2110 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D Trad_2656 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D Trad_0423 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D Trad_0707 phage shock protein C, PspC K03973 pspC; phage shock protein C D Trad_0291 phage shock protein C, PspC K03973 pspC; phage shock protein C D Trad_1431 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D Trad_0928 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D Trad_1432 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 D Trad_0837 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Trad_2820 conserved hypothetical protein K21495 fitA; antitoxin FitA D Trad_1611 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Trad_0317 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins D Trad_1283 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Trad_1999 Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Trad_1802 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:tra04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:tra04090] C 01504 Antimicrobial resistance genes [BR:tra01504] D Trad_2171 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D Trad_0811 major facilitator superfamily MFS_1 K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter D Trad_0281 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1 D Trad_0280 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Trad_0869 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Trad_1178 outer membrane efflux protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tra00537] D Trad_0557 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Trad_2284 peptidase M19 renal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:tra03100] D Trad_R0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Trad_R0029 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Trad_R0034 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Trad_R0002 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Trad_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Trad_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Trad_R0033 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Trad_R0006 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Trad_R0036 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Trad_R0049 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Trad_R0031 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Trad_R0042 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Trad_R0022 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Trad_R0013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Trad_R0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Trad_R0048 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Trad_R0044 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Trad_R0017 tRNA-His K14226 tRNA-His; tRNA His D Trad_R0053 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Trad_R0024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Trad_R0016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Trad_R0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Trad_R0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Trad_R0023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Trad_R0012 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Trad_R0052 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Trad_R0027 tRNA-Met K14230 tRNA-Met; tRNA Met D Trad_R0007 tRNA-Met K14230 tRNA-Met; tRNA Met D Trad_R0008 tRNA-Met K14230 tRNA-Met; tRNA Met D Trad_R0037 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Trad_R0028 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Trad_R0021 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Trad_R0047 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Trad_R0050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Trad_R0018 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Trad_R0035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Trad_R0019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Trad_R0046 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Trad_R0043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Trad_R0038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Trad_R0041 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Trad_R0045 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Trad_R0014 tRNA-Val K14237 tRNA-Val; tRNA Val D Trad_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val D Trad_R0030 tRNA-Val K14237 tRNA-Val; tRNA Val D Trad_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Trad_R0003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Trad_R0004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Trad_R0009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Trad_R0005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Trad_R0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Trad_R0025 RNA component of RNaseP K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Trad_1627 Methylglyoxal reductase (NADPH-dependent) K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D Trad_2940 aldo/keto reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D Trad_0906 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D Trad_1626 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D Trad_2257 transcriptional activator, TenA family K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D Trad_0847 amine oxidase K05300 K05300; L-amino acid dehydrogenase [EC:1.4.5.-] D Trad_2750 amine oxidase K18208 RNLS; renalase [EC:1.6.3.5] D Trad_2763 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Trad_0760 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-] D Trad_0911 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Trad_0392 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Trad_0871 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D Trad_0726 Catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D Trad_0219 Catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D Trad_0175 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Trad_0184 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Trad_2541 peroxiredoxin, OsmC subfamily K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D Trad_2907 HI0933 family protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Trad_1206 glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3] D Trad_2154 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Trad_2156 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Trad_2590 rRNA (guanine-N(2)-)-methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D Trad_0240 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Trad_0575 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D Trad_1826 glycosidase-related protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340] D Trad_1637 glycosidase-related protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340] D Trad_1855 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Trad_0088 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D Trad_1262 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Trad_2028 2-phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16] D Trad_0850 2-phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16] D Trad_0817 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18] D Trad_1704 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Trad_0294 Stf0 sulfotransferase K21014 stf0; trehalose 2-sulfotransferase [EC:2.8.2.37] D Trad_1307 alpha/beta hydrolase fold protein K03928 yvaK; carboxylesterase [EC:3.1.1.1] D Trad_0538 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Trad_1897 conserved hypothetical protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D Trad_0234 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Trad_2504 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Trad_1382 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Trad_0233 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Trad_2337 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-] D Trad_0329 putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Trad_0444 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D Trad_2333 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Trad_2390 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D Trad_2103 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Trad_2097 glycoside hydrolase family 10 K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Trad_2038 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D Trad_0722 glycoside hydrolase family 43 K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99] D Trad_0950 glycoside hydrolase family 37 K25649 mgh; mannosylglycerate hydrolase [EC:3.2.1.170] D Trad_1702 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Trad_0559 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D Trad_2782 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D Trad_2897 LmbE family protein K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-] D Trad_0364 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Trad_0330 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25] D Trad_0600 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Trad_0595 UV-endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-] D Trad_0283 Radical SAM domain protein K03716 splB; spore photoproduct lyase [EC:4.1.99.14] D Trad_2369 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Trad_0887 Pyridoxal-5'-phosphate-dependent protein beta subunit K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D Trad_2112 RbsD or FucU transport K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D Trad_2158 Xylose isomerase domain protein TIM barrel K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31] D Trad_2142 protein of unknown function DUF718 K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D Trad_1376 YjeF-family domain protein K17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6] D Trad_2129 Peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D Trad_2082 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D Trad_1582 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D Trad_0400 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB D Trad_2884 Histone deacetylase K04768 acuC; acetoin utilization protein AcuC D Trad_2966 protein of unknown function DUF224 cysteine-rich region domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D Trad_2965 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D Trad_2964 protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG D Trad_1380 protein of unknown function UCP012535 K22136 bshC; bacillithiol synthase C 99982 Energy metabolism D Trad_0178 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D Trad_2799 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Trad_2661 alanine racemase domain protein K06997 yggS; PLP dependent protein D Trad_1289 GCN5-related N-acetyltransferase K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D Trad_0475 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D Trad_1562 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism C 99988 Secondary metabolism D Trad_0775 esterase K03932 lpqC; polyhydroxybutyrate depolymerase C 99999 Others D Trad_2651 Glyoxalase/bleomycin resistance protein/dioxygenase K15975 K15975; glyoxalase family protein D Trad_1133 DoxX family protein K15977 K15977; putative oxidoreductase D Trad_2650 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase D Trad_1357 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase D Trad_2122 conserved hypothetical protein K26959 brxC; monothiol bacilliredoxin B B 09192 Unclassified: genetic information processing C 99973 Transcription D Trad_2088 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Trad_2125 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D Trad_0594 trigger factor K03545 tig; trigger factor D Trad_1586 SsrA-binding protein K03664 smpB; SsrA-binding protein D Trad_2800 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D Trad_0236 OsmC family protein K07397 yhfA; putative redox protein D Trad_2621 nitrogen-fixing NifU domain protein K07400 nfuA; Fe/S biogenesis protein NfuA D Trad_0985 conserved hypothetical protein K07401 K07401; selenoprotein W-related protein D Trad_1512 xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor D Trad_0448 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D Trad_2403 methylated-DNA/protein-cysteinemethyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D Trad_2714 protein of unknown function DUF559 K07445 K07445; putative DNA methylase D Trad_0029 protein of unknown function UPF0102 K07460 yraN; putative endonuclease D Trad_2033 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease D Trad_1648 DNA protecting protein DprA K04096 smf; DNA processing protein D Trad_1470 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Trad_2836 conserved hypothetical protein K07483 K07483; transposase D Trad_0547 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Trad_0698 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Trad_0542 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Trad_2701 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Trad_2412 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Trad_1876 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Trad_1424 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Trad_1194 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Trad_0937 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Trad_0633 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Trad_0611 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Trad_0170 transposase, IS605 OrfB family K07496 K07496; putative transposase D Trad_0548 transposase, IS605 OrfB family K07496 K07496; putative transposase D Trad_0697 transposase, IS605 OrfB family K07496 K07496; putative transposase D Trad_2220 transposase, IS605 OrfB family K07496 K07496; putative transposase D Trad_0634 transposase, IS605 OrfB family K07496 K07496; putative transposase D Trad_0612 transposase, IS605 OrfB family K07496 K07496; putative transposase D Trad_2837 Integrase catalytic region K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Trad_2375 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Trad_2720 major facilitator superfamily MFS_1 K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Trad_1975 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Trad_1175 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Trad_2553 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family D Trad_0276 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Trad_0781 nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D Trad_0371 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein D Trad_0203 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S C 99993 Cell motility D Trad_1082 gliding motility protein K24105 mglA; mutual gliding-motility protein MglA C 99995 Signaling proteins D Trad_1018 carbon starvation protein CstA K06200 cstA; carbon starvation protein D Trad_2075 GTP-binding protein TypA K06207 typA; GTP-binding protein D Trad_0445 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Trad_0246 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase K07182 K07182; CBS domain-containing protein D Trad_1460 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K22747 AIFM3; apoptosis-inducing factor 3 C 99992 Structural proteins D Trad_0067 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein D Trad_1176 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Trad_0415 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE D Trad_0412 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Trad_1988 conserved hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D Trad_0880 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein B B 09194 Poorly characterized C 99996 General function prediction only D Trad_2774 ChaB family protein K06197 chaB; cation transport regulator D Trad_1945 Protein of unknown function DUF1998 K06877 K06877; DEAD/DEAH box helicase domain-containing protein D Trad_1797 globin K06886 glbN; hemoglobin D Trad_1567 conserved hypothetical protein; putative membrane protein K06994 K06994; putative drug exporter of the RND superfamily D Trad_2364 Patatin K07001 K07001; NTE family protein D Trad_1110 Patatin K07001 K07001; NTE family protein D Trad_1182 Patatin K07001 K07001; NTE family protein D Trad_2532 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 K07025; putative hydrolase of the HAD superfamily D Trad_2431 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D Trad_2808 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 K07025; putative hydrolase of the HAD superfamily D Trad_0264 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D Trad_0261 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D Trad_2317 ribonuclease BN K07058 K07058; membrane protein D Trad_0833 ribonuclease BN K07058 K07058; membrane protein D Trad_0606 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D Trad_0782 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE D Trad_0965 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein D Trad_2806 Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein K02862 ctaG; putative membrane protein D Trad_1446 Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein K02862 ctaG; putative membrane protein D Trad_2592 LemA family protein K03744 lemA; LemA protein D Trad_0803 membrane protein of unknown function K08972 K08972; putative membrane protein D Trad_1185 protein of unknown function DUF368 K08974 K08974; putative membrane protein C 99997 Function unknown D Trad_2669 Radical SAM domain protein K06871 K06871; uncharacterized protein D Trad_0017 protein of unknown function DUF255 K06888 K06888; uncharacterized protein D Trad_2594 protein of unknown function DUF1486 K06893 K06893; uncharacterized protein D Trad_2372 protein of unknown function DUF815 K06923 K06923; uncharacterized protein D Trad_0070 conserved hypothetical protein K06960 K06960; uncharacterized protein D Trad_0202 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein D Trad_0677 conserved hypothetical protein K06975 K06975; uncharacterized protein D Trad_0541 Endonuclease/exonuclease/phosphatase K07004 K07004; uncharacterized protein D Trad_1875 TatD-related deoxyribonuclease K07051 K07051; uncharacterized protein D Trad_1636 protein of unknown function zinc metallopeptidase putative K07054 K07054; uncharacterized protein D Trad_2653 PilT domain-containing protein K07063 K07063; uncharacterized protein D Trad_1393 PIN domain protein family protein K07064 K07064; uncharacterized protein D Trad_1402 PIN domain protein family protein K07064 K07064; uncharacterized protein D Trad_2713 PilT protein domain protein K07064 K07064; uncharacterized protein D Trad_1398 PilT protein domain protein K07065 K07065; uncharacterized protein D Trad_0958 PilT protein domain protein K07065 K07065; uncharacterized protein D Trad_0287 domain of unknown function DUF1731 K07071 K07071; uncharacterized protein D Trad_0054 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Trad_2132 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Trad_0408 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Trad_0511 metallophosphoesterase K07098 K07098; uncharacterized protein D Trad_2769 metallophosphoesterase K07098 K07098; uncharacterized protein D Trad_1466 metallophosphoesterase K07099 K07099; uncharacterized protein D Trad_0801 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein D Trad_0802 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein D Trad_0290 membrane protein AbrB duplication K07120 K07120; uncharacterized protein D Trad_2236 protein of unknown function DUF418 K07148 K07148; uncharacterized protein D Trad_2238 protein of unknown function DUF405 K07148 K07148; uncharacterized protein D Trad_2425 protein of unknown function DUF554 K07150 K07150; uncharacterized protein D Trad_2603 peptidase S16 lon domain protein K07157 K07157; uncharacterized protein D Trad_1137 protein of unknown function DUF164 K07164 K07164; uncharacterized protein D Trad_0369 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Trad_0344 protein of unknown function DUF151 K08999 K08999; uncharacterized protein D Trad_2034 protein of unknown function DUF1684 K09164 K09164; uncharacterized protein D Trad_0563 Protein of unknown function DUF2071 K09166 K09166; uncharacterized protein D Trad_0708 protein of unknown function DUF309 K09763 K09763; uncharacterized protein D Trad_0819 protein of unknown function DUF503 K09764 K09764; uncharacterized protein D Trad_0010 YCII-related protein K09780 K09780; uncharacterized protein D Trad_1657 conserved hypothetical protein K09785 K09785; uncharacterized protein D Trad_1261 protein of unknown function DUF456 K09793 K09793; uncharacterized protein D Trad_2133 protein of unknown function DUF497 K09803 K09803; uncharacterized protein D Trad_2226 protein of unknown function DUF541 K09807 K09807; uncharacterized protein D Trad_2849 protein of unknown function DUF1043 K09908 K09908; uncharacterized protein D Trad_2009 protein of unknown function DUF480 K09915 K09915; uncharacterized protein D Trad_2327 conserved hypothetical protein K09940 K09940; uncharacterized protein D Trad_1537 protein of unknown function DUF779 K09959 K09959; uncharacterized protein D Trad_2094 conserved hypothetical protein K09992 K09992; uncharacterized protein D Trad_1346 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 2, 2024