+D GENES KO
#
KEGG Orthology (KO) - Thioalkalivibrio versutus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tvr00010]
D TVD_11095 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TVD_03010 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TVD_13210 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TVD_13215 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVD_06205 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVD_12565 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TVD_03570 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TVD_12580 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TVD_12575 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TVD_13725 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TVD_07150 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TVD_12570 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVD_03915 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVD_00800 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D TVD_12050 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D TVD_12045 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TVD_10160 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12040 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_03980 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TVD_04975 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVD_05820 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVD_02755 aldose epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
C 00020 Citrate cycle (TCA cycle) [PATH:tvr00020]
D TVD_07495 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D TVD_06775 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D TVD_06755 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TVD_13145 sucA; 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D TVD_13140 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TVD_10160 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12040 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_11330 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TVD_11335 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TVD_08050 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TVD_08040 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TVD_08060 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TVD_08055 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D TVD_06795 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D TVD_12750 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TVD_08555 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D TVD_08560 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D TVD_12050 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D TVD_12045 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:tvr00030]
D TVD_03010 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TVD_12520 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TVD_12585 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TVD_11115 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D TVD_04975 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVD_05820 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVD_12080 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TVD_06205 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVD_12565 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TVD_13215 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVD_13210 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tvr00040]
D TVD_05075 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TVD_05085 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TVD_06550 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TVD_12520 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TVD_05040 carbohydrate kinase K22935 XK1; D-ribulokinase [EC:2.7.1.47]
D TVD_06575 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:tvr00051]
D TVD_13070 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D TVD_05820 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVD_05825 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D TVD_05830 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D TVD_05835 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D TVD_06575 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D TVD_13210 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TVD_13215 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVD_01845 carbohydrate kinase K00846 KHK; ketohexokinase [EC:2.7.1.3]
D TVD_06205 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVD_12565 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TVD_03570 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TVD_01855 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:tvr00052]
D TVD_00230 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TVD_01915 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TVD_06550 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TVD_04975 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVD_05820 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVD_11095 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TVD_13210 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:tvr00053]
D TVD_05075 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TVD_05085 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TVD_09510 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:tvr00500]
D TVD_01115 HAD family hydrolase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14]
D TVD_06550 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TVD_05370 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D TVD_03005 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D TVD_05365 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D TVD_00860 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D TVD_05380 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D TVD_04975 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVD_05820 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVD_11095 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TVD_03010 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TVD_13070 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tvr00520]
D TVD_06655 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TVD_13070 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D TVD_13600 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TVD_03565 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D TVD_13595 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D TVD_11915 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D TVD_07340 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D TVD_12395 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D TVD_12400 mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D TVD_01955 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TVD_02190 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TVD_00485 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TVD_00495 Vi polysaccharide biosynthesis protein VipA/TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D TVD_05100 UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D TVD_05115 polysaccharide biosynthesis protein K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D TVD_05110 NeuA K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D TVD_11095 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TVD_04975 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVD_05820 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVD_06550 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TVD_05075 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TVD_05085 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TVD_00230 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TVD_01915 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TVD_09510 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D TVD_01855 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D TVD_03010 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TVD_05825 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D TVD_05830 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D TVD_05835 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D TVD_13445 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D TVD_05370 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:tvr00620]
D TVD_03980 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TVD_12050 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D TVD_12045 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TVD_10160 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12040 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12570 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVD_03915 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVD_07195 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TVD_01225 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TVD_01220 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TVD_05525 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TVD_10105 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D TVD_13235 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D TVD_09170 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D TVD_11180 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D TVD_07585 metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D TVD_12755 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D TVD_08555 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D TVD_08560 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D TVD_12750 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TVD_06795 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D TVD_03000 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TVD_00800 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D TVD_08590 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tvr00630]
D TVD_03980 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TVD_12750 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TVD_07495 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D TVD_06775 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D TVD_07480 glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D TVD_04215 FAD linked oxidase K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D TVD_04210 glcF; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D TVD_12460 4Fe-4S ferredoxin K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D TVD_03285 catalase K03781 katE; catalase [EC:1.11.1.6]
D TVD_07425 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D TVD_06420 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D TVD_12515 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D TVD_09485 rbcL; ribulose 1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D TVD_09480 ribulose 1,5-bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D TVD_04205 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TVD_13790 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TVD_04235 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TVD_04110 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TVD_04120 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TVD_04100 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TVD_10160 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12040 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_04105 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D TVD_10610 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D TVD_10620 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D TVD_08630 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D TVD_09590 6-phosphogluconate dehydrogenase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D TVD_02700 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D TVD_00550 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:tvr00640]
D TVD_03980 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TVD_10160 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12040 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_08880 acryloyl-CoA reductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D TVD_07195 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TVD_01225 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TVD_01220 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TVD_05525 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TVD_11335 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TVD_11330 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:tvr00650]
D TVD_08050 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TVD_08040 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TVD_08060 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TVD_08055 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D TVD_00725 succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D TVD_10510 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVD_13055 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVD_10505 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:tvr00660]
D TVD_10510 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVD_13055 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVD_10505 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TVD_11335 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TVD_11330 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TVD_05475 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D TVD_05480 hypothetical protein K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D TVD_05485 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:tvr00562]
D TVD_00955 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TVD_04855 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TVD_03570 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tvr00190]
D TVD_03585 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D TVD_03590 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D TVD_03595 NADH dehydrogenase K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D TVD_03600 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D TVD_03605 NADH dehydrogenase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D TVD_03610 NADH dehydrogenase K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D TVD_03615 NADH dehydrogenase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D TVD_03620 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D TVD_03625 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D TVD_03630 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D TVD_03635 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D TVD_03640 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D TVD_03645 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D TVD_03650 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D TVD_08050 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TVD_08040 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TVD_08060 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TVD_08055 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D TVD_02090 ubiquinol-cytochrome C reductase K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TVD_07440 ubiquinol-cytochrome C reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TVD_02095 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D TVD_02100 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D TVD_12855 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D TVD_12850 peptidase S41 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D TVD_12840 cytochrome C oxidase subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D TVD_13575 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D TVD_13585 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D TVD_13580 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D TVD_13570 ATP synthase F0F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D TVD_13590 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D TVD_13555 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TVD_13565 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D TVD_13560 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D TVD_11065 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D TVD_07815 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:tvr00710]
D TVD_09485 rbcL; ribulose 1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D TVD_09480 ribulose 1,5-bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D TVD_12575 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TVD_12580 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TVD_06205 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVD_12565 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TVD_13215 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVD_12585 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TVD_11115 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D TVD_00045 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D TVD_03570 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TVD_12520 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TVD_03000 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TVD_12755 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D TVD_12750 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:tvr00720]
D TVD_00800 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D TVD_03000 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TVD_08555 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D TVD_08560 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D TVD_12750 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TVD_06795 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D TVD_08050 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TVD_08040 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TVD_08060 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TVD_08055 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D TVD_11330 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TVD_11335 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TVD_06755 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TVD_06775 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D TVD_07195 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TVD_01225 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TVD_01220 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TVD_05525 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TVD_10795 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D TVD_12600 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D TVD_03980 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:tvr00680]
D TVD_04235 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TVD_04205 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TVD_07425 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D TVD_07150 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TVD_03000 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TVD_12750 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TVD_06205 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVD_12565 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TVD_13215 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVD_13210 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TVD_07390 glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D TVD_10640 pyridine nucleotide-disulfide oxidoreductase K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D TVD_10625 disulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D TVD_10645 heterodisulfide reductase subunit B K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D TVD_10650 heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D TVD_10630 heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D TVD_03980 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TVD_00800 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D TVD_13725 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TVD_06490 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TVD_06485 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:tvr00910]
D TVD_03405 bicarbonate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D TVD_08110 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D TVD_03410 bicarbonate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D TVD_08115 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D TVD_03415 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TVD_08120 nitrate ABC transporter ATPase K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TVD_03430 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D TVD_03420 nitrite reductase K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D TVD_03425 nitrite reductase K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D TVD_03855 hypothetical protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D TVD_06815 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TVD_13290 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D TVD_13790 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TVD_01755 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TVD_01785 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D TVD_08125 cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D TVD_04635 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:tvr00920]
D TVD_00855 3'-5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D TVD_09630 molybdopterin containing oxidoreductase K00387 SUOX; sulfite oxidase [EC:1.8.3.1]
D TVD_12925 formate dehydrogenase K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D TVD_12920 ferredoxin K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D TVD_12915 DMSO reductase K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D TVD_11755 sulfur oxidation protein SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D TVD_11745 sulfur oxidation protein SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D TVD_11750 sulfur oxidation protein SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D TVD_13670 sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D TVD_13675 sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D TVD_10675 5'-nucleotidase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D TVD_06210 5'-nucleotidase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D TVD_01535 sulfide dehydrogenase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D TVD_01540 cytochrome C, class I K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D TVD_10990 Zn-dependent hydrolase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D TVD_04865 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D TVD_00685 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D TVD_10835 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tvr00061]
D TVD_07195 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TVD_01225 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TVD_01220 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TVD_05525 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TVD_06725 acyl carrier protein K02078 acpP; acyl carrier protein
D TVD_11520 acyl carrier protein K02078 acpP; acyl carrier protein
D TVD_00390 acyl carrier protein K02078 acpP; acyl carrier protein
D TVD_06735 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TVD_08535 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TVD_11555 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D TVD_06720 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TVD_06730 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVD_11570 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVD_04445 3-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D TVD_07230 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TVD_11535 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TVD_10310 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TVD_09795 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tvr00071]
D TVD_09795 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TVD_08070 pyridine nucleotide-disulfide oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tvr00561]
D TVD_02700 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D TVD_08540 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D TVD_12870 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TVD_00010 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TVD_04135 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:tvr00564]
D TVD_11265 hypothetical protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D TVD_11820 Fe-S oxidoreductase K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D TVD_12870 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TVD_00010 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TVD_04135 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D TVD_03700 SAM-dependent methlyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D TVD_07260 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D TVD_10490 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D TVD_10425 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D TVD_10495 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D TVD_08505 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D TVD_04275 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D TVD_09290 HAD family hydrolase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D TVD_05850 phospholipase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D TVD_11195 phospholipase D K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D TVD_10830 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D TVD_03240 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D TVD_06190 phospholipase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D TVD_10135 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D TVD_10595 geranylgeranyl reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:tvr01040]
D TVD_13295 stearoyl-CoA 9-desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D TVD_06905 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D TVD_02600 acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tvr00230]
D TVD_00850 ADP-ribose diphosphatase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D TVD_04975 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVD_05820 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVD_12080 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TVD_05545 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TVD_00865 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D TVD_10150 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TVD_06225 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D TVD_10145 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D TVD_12540 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D TVD_12545 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D TVD_12550 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D TVD_06800 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TVD_00870 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TVD_05705 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TVD_00840 haloacid dehalogenase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D TVD_11305 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D TVD_06665 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D TVD_03185 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TVD_04910 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TVD_00120 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D TVD_03190 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TVD_03140 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D TVD_09145 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TVD_09140 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TVD_01765 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D TVD_03130 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TVD_07825 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D TVD_06995 relA; (p)ppGpp synthetase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D TVD_00950 guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D TVD_08530 CYTH domain protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D TVD_10885 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D TVD_02955 sugar kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D TVD_08835 adenine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D TVD_11070 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TVD_10985 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TVD_12390 phosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D TVD_11105 diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D TVD_04635 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:tvr00240]
D TVD_03535 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TVD_03530 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TVD_13780 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TVD_12680 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TVD_06970 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D TVD_12685 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D TVD_12980 diguanylate cyclase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D TVD_12690 oxidoreductase K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D TVD_13735 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D TVD_06540 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D TVD_07275 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D TVD_04910 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TVD_10985 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TVD_02575 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D TVD_07160 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D TVD_06515 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D TVD_00210 NUDIX hydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D TVD_05705 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TVD_12675 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D TVD_08725 cytidine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D TVD_04630 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D TVD_09145 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TVD_09140 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TVD_06700 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D TVD_01140 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TVD_04160 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D TVD_13765 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tvr00250]
D TVD_06645 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVD_10975 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D TVD_00355 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TVD_00385 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TVD_13785 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TVD_08680 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TVD_04205 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TVD_12030 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TVD_13420 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TVD_10885 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D TVD_06800 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TVD_13780 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TVD_12680 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TVD_00725 succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D TVD_01755 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TVD_01785 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D TVD_06815 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TVD_13290 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D TVD_13790 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TVD_03535 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TVD_03530 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TVD_13600 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TVD_05545 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tvr00260]
D TVD_09185 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TVD_05490 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TVD_05740 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TVD_05745 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D TVD_04235 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TVD_04205 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TVD_07425 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D TVD_02700 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D TVD_13725 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TVD_06490 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TVD_06485 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TVD_04110 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TVD_04120 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TVD_04100 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TVD_10160 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12040 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_04105 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D TVD_10610 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D TVD_10620 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D TVD_08630 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D TVD_10490 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D TVD_00875 SAM-dependent methyltransferase K18896 gsmt; glycine/sarcosine N-methyltransferase [EC:2.1.1.156]
D TVD_00880 methyltransferase K18897 sdmt; sarcosine/dimethylglycine N-methyltransferase [EC:2.1.1.157]
D TVD_11110 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D TVD_05520 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D TVD_05515 tryptophan synthase subunit alpha K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TVD_08750 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:tvr00270]
D TVD_04865 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D TVD_00890 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TVD_12590 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TVD_12470 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D TVD_01385 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D TVD_11305 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D TVD_07330 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D TVD_06670 5'-methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D TVD_06475 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D TVD_04615 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D TVD_04610 enolase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D TVD_00505 histidine kinase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D TVD_12595 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TVD_09185 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TVD_05490 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TVD_05740 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TVD_00685 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D TVD_10835 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D TVD_12240 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TVD_01070 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D TVD_12640 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D TVD_06645 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVD_12750 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TVD_04340 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D TVD_06490 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TVD_06485 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:tvr00280]
D TVD_12240 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TVD_10160 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12040 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12775 3-hydroxyacid dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tvr00290]
D TVD_11110 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D TVD_05475 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D TVD_05480 hypothetical protein K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D TVD_05485 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D TVD_10510 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVD_13055 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVD_10505 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TVD_10500 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D TVD_06560 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TVD_12365 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TVD_12240 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TVD_08590 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:tvr00300]
D TVD_05740 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TVD_09185 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TVD_05490 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TVD_11865 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TVD_03525 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D TVD_07770 dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D TVD_08405 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TVD_07765 succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D TVD_13655 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D TVD_00455 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TVD_13665 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TVD_02155 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TVD_02160 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:tvr00310]
D TVD_13140 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TVD_10160 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12040 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_11035 cytochrome C550 K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:tvr00220]
D TVD_08410 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D TVD_12030 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TVD_13420 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TVD_13790 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TVD_03535 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TVD_03530 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TVD_04635 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D TVD_06815 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TVD_13290 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D TVD_06645 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVD_12380 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D TVD_02235 argJ; ornithine acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D TVD_01130 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D TVD_11935 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D TVD_08405 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:tvr00330]
D TVD_05760 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D TVD_08725 cytidine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D TVD_01390 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D TVD_06440 acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D TVD_01385 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D TVD_12470 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D TVD_12715 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D TVD_03170 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D TVD_02555 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D TVD_13615 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TVD_06645 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVD_11035 cytochrome C550 K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:tvr00340]
D TVD_01960 hisG; ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D TVD_10890 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D TVD_13705 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D TVD_09775 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D TVD_13695 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D TVD_13690 hisH; imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D TVD_13700 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D TVD_13685 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D TVD_06500 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVD_01975 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVD_01195 inositol-phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D TVD_01970 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D TVD_07835 methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:tvr00350]
D TVD_06645 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVD_06500 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVD_01975 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVD_10075 macrophage migration inhibitory factor family protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
C 00360 Phenylalanine metabolism [PATH:tvr00360]
D TVD_06645 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVD_06500 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVD_01975 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVD_01575 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D TVD_11035 cytochrome C550 K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D TVD_10075 macrophage migration inhibitory factor family protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
D TVD_02820 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D TVD_05020 ferredoxin K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:tvr00380]
D TVD_13140 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TVD_10160 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12040 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_03285 catalase K03781 katE; catalase [EC:1.11.1.6]
D TVD_02820 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tvr00400]
D TVD_01965 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D TVD_01770 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D TVD_01230 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D TVD_01240 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D TVD_01830 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D TVD_06510 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D TVD_03515 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D TVD_12510 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TVD_12500 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D TVD_12490 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D TVD_05510 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D TVD_12485 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D TVD_05520 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D TVD_05515 tryptophan synthase subunit alpha K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TVD_08750 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TVD_06495 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D TVD_06505 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D TVD_06645 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVD_06500 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVD_01975 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVD_06985 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D TVD_10280 pteridine-dependent deoxygenase like protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tvr00410]
D TVD_11340 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D TVD_11345 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D TVD_13765 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00430 Taurine and hypotaurine metabolism
D TVD_13165 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:tvr00450]
D TVD_00890 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TVD_09150 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D TVD_04620 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tvr00460]
D TVD_13165 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TVD_04235 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tvr00470]
D TVD_10840 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TVD_11035 cytochrome C550 K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D TVD_02195 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TVD_02170 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TVD_13655 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D TVD_00455 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TVD_13665 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TVD_01575 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:tvr00480]
D TVD_13165 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TVD_09550 5-oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D TVD_01070 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D TVD_12640 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D TVD_06820 cytochrome C oxidase subunit II K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TVD_02585 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TVD_02050 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D TVD_11380 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D TVD_04030 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D TVD_06755 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TVD_05595 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D TVD_02815 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D TVD_04035 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D TVD_01385 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:tvr00540]
D TVD_07225 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D TVD_02215 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D TVD_07235 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D TVD_10810 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D TVD_07220 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D TVD_04375 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D TVD_01905 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D TVD_07155 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D TVD_01900 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D TVD_04385 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D TVD_12185 hypothetical protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D TVD_12190 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TVD_01325 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TVD_01160 membrane protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tvr00541]
D TVD_06550 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TVD_00230 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TVD_01915 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TVD_05075 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TVD_05085 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TVD_09510 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D TVD_13445 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D TVD_05825 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D TVD_05830 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D TVD_05835 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D TVD_13595 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D TVD_00485 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TVD_05100 UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D TVD_05115 polysaccharide biosynthesis protein K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D TVD_05110 NeuA K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D TVD_05070 capsular biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D TVD_05180 nucleoside-diphosphate sugar epimerase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D TVD_00495 Vi polysaccharide biosynthesis protein VipA/TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C 00550 Peptidoglycan biosynthesis [PATH:tvr00550]
D TVD_01955 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TVD_02190 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TVD_02185 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TVD_02170 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TVD_02155 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TVD_02195 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TVD_02160 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TVD_07265 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TVD_06920 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TVD_04195 phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TVD_02165 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TVD_02180 murG; UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TVD_05410 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D TVD_01800 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TVD_05665 penicillin-binding protein K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D TVD_11060 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TVD_02150 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TVD_11040 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TVD_11600 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:tvr00552]
D TVD_06920 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TVD_04195 phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TVD_05070 capsular biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:tvr00543]
D TVD_09395 N-acetylglucosaminyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D TVD_04865 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D TVD_00435 glycosyl transferase K16562 exoW; succinoglycan biosynthesis protein ExoW [EC:2.4.-.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tvr00730]
D TVD_13395 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D TVD_11970 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D TVD_04875 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TVD_11840 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TVD_00065 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D TVD_11975 thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D TVD_04270 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D TVD_04065 ribosome small subunit-dependent GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TVD_11070 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:tvr00740]
D TVD_05755 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D TVD_04255 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D TVD_04245 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D TVD_04405 haloacid dehalogenase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D TVD_04260 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D TVD_04250 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D TVD_00575 FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D TVD_07100 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D TVD_06760 NUDIX hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D TVD_12005 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:tvr00750]
D TVD_07395 pyridoxine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D TVD_06485 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TVD_11085 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D TVD_10910 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D TVD_05745 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tvr00760]
D TVD_10975 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D TVD_01485 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D TVD_04085 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D TVD_05705 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TVD_02560 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D TVD_10985 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TVD_11325 NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D TVD_09215 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D TVD_11650 inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D TVD_01610 NAD(P) transhydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D TVD_01615 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D TVD_01605 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D TVD_00725 succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
C 00770 Pantothenate and CoA biosynthesis [PATH:tvr00770]
D TVD_10510 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVD_13055 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TVD_10505 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TVD_10500 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D TVD_06560 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TVD_12365 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TVD_11350 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D TVD_11345 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D TVD_07790 Baf family transcriptional regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D TVD_01145 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D TVD_10985 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TVD_13175 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D TVD_02250 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D TVD_10905 ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D TVD_12240 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TVD_13765 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D TVD_11340 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:tvr00780]
D TVD_12860 malonyl-CoA O-methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D TVD_11555 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D TVD_06720 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TVD_06730 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVD_11570 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVD_07230 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TVD_11535 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TVD_10310 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TVD_12865 carboxylesterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D TVD_12355 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D TVD_06675 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D TVD_12555 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D TVD_12345 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D TVD_07795 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tvr00785]
D TVD_11025 lipoate--protein ligase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D TVD_11020 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D TVD_10605 radical SAM protein K09711 lipS1; lipoyl synthase
D TVD_10590 radical SAM protein K24689 lipS2; lipoyl synthase
D TVD_10600 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D TVD_07545 ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D TVD_10160 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12040 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12050 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D TVD_12045 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TVD_13145 sucA; 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D TVD_13140 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TVD_04110 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TVD_04120 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TVD_04100 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TVD_04105 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D TVD_10610 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D TVD_10620 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D TVD_08630 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tvr00790]
D TVD_09905 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D TVD_01355 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D TVD_11360 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D TVD_03560 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D TVD_04155 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D TVD_05530 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D TVD_05755 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D TVD_04255 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D TVD_06715 hypothetical protein K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D TVD_06710 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D TVD_11845 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TVD_04070 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D TVD_12885 pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D TVD_10375 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D TVD_00830 queuosine synthesis-like protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D TVD_10370 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D TVD_05045 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D TVD_12930 molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D TVD_00165 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D TVD_00155 molybdopterin converting factor K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D TVD_08670 molybdopterin biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D TVD_02615 molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D TVD_02625 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:tvr00670]
D TVD_04155 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D TVD_10795 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D TVD_04235 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TVD_10150 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TVD_00870 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TVD_01285 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D TVD_04100 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TVD_00890 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TVD_04160 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D TVD_00550 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D TVD_12600 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D TVD_03500 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tvr00860]
D TVD_04790 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TVD_12105 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D TVD_11980 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D TVD_01245 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D TVD_13435 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D TVD_13440 uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D TVD_03440 uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D TVD_01790 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D TVD_01250 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D TVD_07355 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D TVD_11945 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D TVD_01625 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D TVD_04705 CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D TVD_03435 sirohydrochlorin ferrochelatase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D TVD_04735 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D TVD_04725 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D TVD_04740 precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D TVD_04760 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D TVD_04755 cobalamin biosynthesis protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D TVD_04745 cobalt-precorrin-6X reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D TVD_04710 cobalt-precorrin-6A synthase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D TVD_04750 precorrin-6Y methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D TVD_04730 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D TVD_04700 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D TVD_04680 cobalamin biosynthesis protein CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D TVD_04675 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D TVD_04695 Cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D TVD_07085 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D TVD_07095 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D TVD_07090 threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D TVD_07080 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D TVD_07065 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D TVD_07075 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D TVD_01185 phosphoglycerate kinase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D TVD_07070 hypothetical protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D TVD_09440 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tvr00130]
D TVD_06985 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D TVD_10280 pteridine-dependent deoxygenase like protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D TVD_12330 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D TVD_13460 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D TVD_12005 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D TVD_09965 ubiquinone biosynthesis protein UbiH K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D TVD_07335 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D TVD_09970 ubiquinone biosynthesis protein UbiH K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D TVD_06980 methyltransferase type 11 K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D TVD_13115 ubiE; ubiquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D TVD_12465 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D TVD_09005 NAD(P)H dehydrogenase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D TVD_10115 NAD(P)H-quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D TVD_07320 NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tvr00900]
D TVD_11840 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TVD_07255 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D TVD_07140 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D TVD_12090 kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D TVD_07135 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D TVD_09720 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D TVD_00555 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D TVD_12005 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D TVD_11835 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D TVD_03150 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D TVD_07265 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:tvr00906]
D TVD_07360 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D TVD_12585 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:tvr00332]
D TVD_03170 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D TVD_02555 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:tvr00261]
D TVD_09185 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TVD_05490 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TVD_11865 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TVD_03525 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tvr00521]
D TVD_11095 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TVD_04975 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TVD_05820 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TVD_00955 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TVD_04855 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D TVD_11095 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:tvr00401]
D TVD_06505 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D TVD_06645 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVD_06500 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVD_01975 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D TVD_12510 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TVD_12500 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D TVD_06735 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TVD_06730 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVD_11570 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVD_10310 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D TVD_06725 acyl carrier protein K02078 acpP; acyl carrier protein
D TVD_11520 acyl carrier protein K02078 acpP; acyl carrier protein
D TVD_00390 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tvr00999]
D TVD_12590 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TVD_01240 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D TVD_04900 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
C 00627 Aminobenzoate degradation [PATH:tvr00627]
D TVD_10105 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D TVD_12005 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:tvr00364]
D TVD_12970 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation
D TVD_02010 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:tvr00361]
D TVD_12970 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D TVD_02010 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:tvr00623]
D TVD_12970 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:tvr00633]
D TVD_02695 N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tvr03020]
D TVD_02325 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TVD_02330 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TVD_02480 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TVD_03135 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tvr03010]
D TVD_06520 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D TVD_07285 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D TVD_02390 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D TVD_02475 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D TVD_02445 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D TVD_10865 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D TVD_02340 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D TVD_02430 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D TVD_11155 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D TVD_02355 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D TVD_02470 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D TVD_02335 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D TVD_02465 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D TVD_02425 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D TVD_03690 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D TVD_11780 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D TVD_02405 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D TVD_10860 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D TVD_02380 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D TVD_13160 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D TVD_01775 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D TVD_02310 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D TVD_02375 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D TVD_02360 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D TVD_02365 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D TVD_02420 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D TVD_02435 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D TVD_02320 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D TVD_10850 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D TVD_02315 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D TVD_02305 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D TVD_11160 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D TVD_02410 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D TVD_02455 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D TVD_02395 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D TVD_02485 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D TVD_02440 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D TVD_11765 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D TVD_07970 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D TVD_03155 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D TVD_02385 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D TVD_02370 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D TVD_02415 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D TVD_12075 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D TVD_03160 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D TVD_10260 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D TVD_02400 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D TVD_02450 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D TVD_12770 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D TVD_08545 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D TVD_10265 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D TVD_13500 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D TVD_07975 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D TVD_11905 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TVD_11890 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TVD_11885 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tvr00970]
D TVD_08330 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TVD_04795 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TVD_11895 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TVD_06895 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVD_10780 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVD_07610 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVD_10775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVD_12905 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVD_06640 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TVD_10320 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TVD_08490 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TVD_11150 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TVD_12085 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TVD_04805 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TVD_02275 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TVD_00075 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TVD_08495 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TVD_10690 tRNA-His K14226 tRNA-His; tRNA His
D TVD_11900 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TVD_05615 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVD_10355 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVD_10880 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVD_06855 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVD_03580 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVD_10685 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TVD_10360 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TVD_12445 tRNA-Met K14230 tRNA-Met; tRNA Met
D TVD_01740 tRNA-Met K14230 tRNA-Met; tRNA Met
D TVD_03660 tRNA-Met K14230 tRNA-Met; tRNA Met
D TVD_00185 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TVD_03145 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TVD_07945 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TVD_10785 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TVD_07400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVD_09565 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVD_07410 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVD_09175 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVD_00085 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TVD_02280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TVD_05610 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TVD_02290 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TVD_02270 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TVD_07405 tRNA-Val K14237 tRNA-Val; tRNA Val
D TVD_10325 tRNA-Val K14237 tRNA-Val; tRNA Val
D TVD_06185 tRNA-Val K14237 tRNA-Val; tRNA Val
D TVD_04790 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TVD_10800 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TVD_12145 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TVD_12140 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TVD_12150 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TVD_09190 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TVD_10020 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TVD_13800 glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D TVD_00005 glyS; glycyl-tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D TVD_07985 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TVD_07470 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TVD_09780 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TVD_04620 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TVD_01285 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D TVD_11500 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TVD_02540 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TVD_00570 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TVD_05335 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TVD_01590 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TVD_10080 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TVD_04930 histidinol dehydrogenase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TVD_07965 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TVD_07960 phenylalanyl-tRNA synthetase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TVD_11910 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TVD_09650 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tvr03060]
D TVD_02460 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D TVD_02295 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D TVD_03575 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D TVD_05635 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D TVD_05640 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D TVD_05630 preprotein translocase subunit YidC K03210 yajC; preprotein translocase subunit YajC
D TVD_13515 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TVD_02230 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TVD_11260 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D TVD_11785 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TVD_12800 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TVD_13710 preprotein translocase K03116 tatA; sec-independent protein translocase protein TatA
D TVD_13715 twin-arginine translocation proteinsubunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D TVD_13720 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D TVD_10935 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TVD_00565 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tvr04122]
D TVD_04875 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TVD_10655 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D TVD_06765 tRNA 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TVD_00155 molybdopterin converting factor K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D TVD_12930 molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D TVD_00160 molybdopterin converting factor K03636 moaD; sulfur-carrier protein
D TVD_12125 molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D TVD_00165 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D TVD_08670 molybdopterin biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D TVD_00070 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:tvr03018]
D TVD_11955 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D TVD_06410 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D TVD_00090 RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D TVD_07150 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TVD_03695 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TVD_05305 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TVD_10875 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TVD_07570 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TVD_10435 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TVD_00100 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TVD_11635 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D TVD_12285 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TVD_11440 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D TVD_07815 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D TVD_11365 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tvr03030]
D TVD_11415 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVD_03985 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVD_07200 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TVD_04040 DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TVD_06695 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TVD_02550 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TVD_02580 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TVD_13490 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TVD_10845 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TVD_01750 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TVD_02500 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TVD_11420 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D TVD_07205 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TVD_13015 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TVD_05060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tvr03410]
D TVD_04570 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TVD_00175 DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D TVD_10285 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D TVD_01330 DNA-(apurinic or apyrimidinic site) lyase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D TVD_08525 SPO1 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TVD_10485 DNA polymerase III K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TVD_13740 DNA-(apurinic or apyrimidinic site) lyase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TVD_13465 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TVD_13015 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TVD_05060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tvr03420]
D TVD_06435 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TVD_02490 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D TVD_06650 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D TVD_08510 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D TVD_13150 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TVD_13015 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TVD_05060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TVD_05285 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
C 03430 Mismatch repair [PATH:tvr03430]
D TVD_09225 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TVD_10515 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D TVD_11450 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D TVD_13150 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TVD_03175 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D TVD_11830 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TVD_02500 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TVD_07200 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TVD_13490 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TVD_04040 DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TVD_02550 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TVD_06695 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TVD_11415 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVD_03985 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVD_02580 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TVD_05060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:tvr03440]
D TVD_02500 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TVD_13485 hypothetical protein K03629 recF; DNA replication and repair protein RecF
D TVD_10915 recombinase RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D TVD_04050 recR; recombination protein RecR K06187 recR; recombination protein RecR
D TVD_09205 recombinase RecA K03553 recA; recombination protein RecA
D TVD_13015 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TVD_10000 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TVD_10415 ruvB; ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TVD_10005 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TVD_11225 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TVD_05275 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D TVD_05270 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D TVD_05280 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D TVD_07200 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TVD_13490 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TVD_04040 DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TVD_02550 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TVD_06695 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TVD_11415 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVD_03985 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVD_02580 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TVD_01595 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tvr02010]
D TVD_03405 bicarbonate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D TVD_08110 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D TVD_03410 bicarbonate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D TVD_08115 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D TVD_03415 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TVD_08120 nitrate ABC transporter ATPase K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TVD_03970 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D TVD_03965 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein
D TVD_03960 molybdenum ABC transporter ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D TVD_12250 iron deficiency-induced protein A K02012 afuA; iron(III) transport system substrate-binding protein
D TVD_12255 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D TVD_12260 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D TVD_10550 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D TVD_10555 glycine/betaine ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D TVD_10560 glycine/betaine ABC transporter ATPase K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D TVD_01945 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D TVD_01940 organic solvent ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D TVD_05585 cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D TVD_01935 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TVD_05575 ABC transport system permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TVD_01950 anti-sigma-factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D TVD_01930 toluene ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TVD_05580 polyamine ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TVD_08350 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TVD_08355 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D TVD_08360 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D TVD_08365 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D TVD_04140 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D TVD_04150 membrane protein K09816 znuB; zinc transport system permease protein
D TVD_04145 zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D TVD_09615 nodulation protein NodJ K09694 nodJ; lipooligosaccharide transport system permease protein
D TVD_09610 ABC transporter K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D TVD_03840 ABC transporter K18233 oleC5; oleandomycin transport system permease protein
D TVD_03845 ABC transporter K18232 oleC4; oleandomycin transport system ATP-binding protein
D TVD_06455 cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein
D TVD_06460 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D TVD_02590 permease K07091 lptF; lipopolysaccharide export system permease protein
D TVD_02595 permease K11720 lptG; lipopolysaccharide export system permease protein
D TVD_01885 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D TVD_12810 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D TVD_12805 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D TVD_04365 lipid transporter ATP-binding/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D TVD_04440 peptidase C39 K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D TVD_10455 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
C 02060 Phosphotransferase system (PTS) [PATH:tvr02060]
D TVD_01850 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D TVD_01855 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D TVD_11950 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D TVD_01870 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:tvr03070]
D TVD_00705 type I secretion protein TolC K12340 tolC; outer membrane protein
D TVD_05430 transporter K12340 tolC; outer membrane protein
D TVD_07650 hypothetical protein K12340 tolC; outer membrane protein
D TVD_04435 hypothetical protein K11003 hlyD; membrane fusion protein, hemolysin D
D TVD_04440 peptidase C39 K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D TVD_01695 general secretion pathway protein GspD K02453 gspD; general secretion pathway protein D
D TVD_01700 hypothetical protein K02452 gspC; general secretion pathway protein C
D TVD_01685 general secretion pathway protein GspF K02455 gspF; general secretion pathway protein F
D TVD_01680 secretion system protein G K02456 gspG; general secretion pathway protein G
D TVD_01675 hypothetical protein K02457 gspH; general secretion pathway protein H
D TVD_01670 general secretion pathway protein GspI K02458 gspI; general secretion pathway protein I
D TVD_01665 hypothetical protein K02459 gspJ; general secretion pathway protein J
D TVD_01660 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D TVD_01655 hypothetical protein K02461 gspL; general secretion pathway protein L
D TVD_01650 hypothetical protein K02462 gspM; general secretion pathway protein M
D TVD_01690 general secretion pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TVD_05635 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D TVD_05640 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D TVD_02295 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D TVD_03575 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D TVD_02460 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D TVD_05630 preprotein translocase subunit YidC K03210 yajC; preprotein translocase subunit YajC
D TVD_13515 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TVD_02230 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TVD_12800 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TVD_11260 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D TVD_11785 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TVD_13710 preprotein translocase K03116 tatA; sec-independent protein translocase protein TatA
D TVD_13715 twin-arginine translocation proteinsubunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D TVD_13720 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tvr02020]
D TVD_08345 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TVD_08340 chemotaxis protein CheY K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D TVD_08350 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TVD_01570 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TVD_01565 transcriptional regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D TVD_10950 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D TVD_08970 flagellin K02406 fliC; flagellin
D TVD_07030 flagellin K02406 fliC; flagellin
D TVD_06335 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D TVD_09735 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D TVD_06870 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D TVD_06360 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D TVD_13495 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D TVD_12440 peptidase M15 K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D TVD_13425 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D TVD_13430 LytTR family transcriptional regulator K08083 algR; two-component system, LytTR family, response regulator AlgR
D TVD_09180 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D TVD_07725 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D TVD_07295 glnD; protein-PII uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D TVD_11320 nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1
D TVD_12990 histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D TVD_12985 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D TVD_13790 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TVD_01300 histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D TVD_01305 nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D TVD_08105 Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D TVD_11170 mutant NtrC activator K07713 zraR; two-component system, NtrC family, response regulator HydG
D TVD_02990 histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D TVD_02985 chemotaxis protein CheY K02667 pilR; two-component system, NtrC family, response regulator PilR
D TVD_01880 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D TVD_00625 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TVD_07915 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TVD_07710 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D TVD_00610 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_00665 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_00630 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_08960 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_05310 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_06925 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_03890 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_13335 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_09725 chemotaxis protein K03776 aer; aerotaxis receptor
D TVD_00640 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TVD_06375 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TVD_06380 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TVD_00645 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TVD_06350 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TVD_00650 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TVD_06340 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TVD_00615 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TVD_06355 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TVD_07920 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D TVD_12620 chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D TVD_12625 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D TVD_12615 histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D TVD_12635 pilus assembly protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D TVD_12630 chemotaxis protein CheY K02658 pilH; twitching motility two-component system response regulator PilH
D TVD_12610 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC
D TVD_06235 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D TVD_06240 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D TVD_12480 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TVD_04520 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TVD_02090 ubiquinol-cytochrome C reductase K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TVD_07440 ubiquinol-cytochrome C reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TVD_02095 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D TVD_02100 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D TVD_12855 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D TVD_12850 peptidase S41 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D TVD_12840 cytochrome C oxidase subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D TVD_00705 type I secretion protein TolC K12340 tolC; outer membrane protein
D TVD_05430 transporter K12340 tolC; outer membrane protein
D TVD_07650 hypothetical protein K12340 tolC; outer membrane protein
D TVD_00240 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein
D TVD_06405 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D TVD_00485 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TVD_07165 serine/threonine protein phosphatase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D TVD_00600 hypothetical protein K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D TVD_00605 anti-anti-sigma factor K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D TVD_07930 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D TVD_02090 ubiquinol-cytochrome C reductase K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TVD_07440 ubiquinol-cytochrome C reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tvr02024]
D TVD_11440 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D TVD_12510 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TVD_12500 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D TVD_01965 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D TVD_01030 hypothetical protein K20528 trbC; type IV secretion system protein TrbC
D TVD_09795 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TVD_12480 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TVD_04520 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TVD_00780 transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D TVD_05755 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D TVD_04245 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D TVD_09230 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D TVD_10305 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TVD_10300 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TVD_10295 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TVD_10290 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TVD_13515 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TVD_02295 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D TVD_03575 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D TVD_02460 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D TVD_05630 preprotein translocase subunit YidC K03210 yajC; preprotein translocase subunit YajC
D TVD_02230 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TVD_12800 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TVD_11260 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D TVD_11785 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:tvr02030]
D TVD_00610 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_00665 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_00630 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_08960 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_05310 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_06925 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_03890 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_13335 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_09725 chemotaxis protein K03776 aer; aerotaxis receptor
D TVD_00645 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TVD_06350 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TVD_00640 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TVD_06375 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TVD_06380 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TVD_00650 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TVD_06340 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TVD_06345 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D TVD_00615 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TVD_06355 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TVD_07710 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D TVD_07920 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D TVD_00620 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D TVD_00625 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TVD_07915 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TVD_06255 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TVD_06285 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TVD_06290 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D TVD_09735 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D TVD_06870 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D TVD_06360 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D TVD_09740 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D TVD_06875 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D TVD_06365 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:tvr02040]
D TVD_06245 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D TVD_06250 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TVD_06255 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TVD_06260 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D TVD_06265 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TVD_06270 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D TVD_06275 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D TVD_00985 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D TVD_06280 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D TVD_06285 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TVD_06290 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D TVD_06295 permease K02418 fliO; flagellar protein FliO/FliZ
D TVD_06300 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D TVD_06305 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TVD_06310 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D TVD_06320 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TVD_06315 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TVD_07925 flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D TVD_07910 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D TVD_07905 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D TVD_07900 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D TVD_07895 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D TVD_07890 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D TVD_07885 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D TVD_07880 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D TVD_07875 flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D TVD_07870 flagellar rod assembly protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D TVD_07865 flagellar hook protein FlgK K02396 flgK; flagellar hook-associated protein 1
D TVD_07860 flagellar hook protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D TVD_12035 flagellar motor protein MotB K21218 motY; sodium-type flagellar protein MotY
D TVD_08970 flagellin K02406 fliC; flagellin
D TVD_07030 flagellin K02406 fliC; flagellin
D TVD_07020 flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D TVD_07015 cyclic nucleotide-binding protein K02422 fliS; flagellar secretion chaperone FliS
D TVD_07010 hypothetical protein K02423 fliT; flagellar protein FliT
D TVD_09735 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D TVD_06870 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D TVD_06360 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D TVD_09740 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D TVD_06875 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D TVD_06365 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D TVD_07930 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D TVD_07935 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D TVD_01745 RNA polymerase subunit sigma-70 K03086 rpoD; RNA polymerase primary sigma factor
D TVD_06235 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D TVD_01880 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D TVD_06240 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D TVD_06335 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D TVD_07150 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:tvr04980]
D TVD_04675 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D TVD_00890 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tvr01501]
D TVD_13745 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D TVD_06655 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TVD_01080 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_09240 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_09495 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_01000 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_01085 multidrug transporter AcrB K18138 acrB; multidrug efflux pump
D TVD_09235 RND transporter K18138 acrB; multidrug efflux pump
D TVD_09490 acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D TVD_09230 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D TVD_00705 type I secretion protein TolC K12340 tolC; outer membrane protein
D TVD_05430 transporter K12340 tolC; outer membrane protein
D TVD_07650 hypothetical protein K12340 tolC; outer membrane protein
D TVD_01800 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TVD_11060 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TVD_02150 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tvr01502]
D TVD_12440 peptidase M15 K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D TVD_02195 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TVD_10840 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TVD_02160 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TVD_02165 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TVD_02180 murG; UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tvr01503]
D TVD_01570 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TVD_01565 transcriptional regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D TVD_11455 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TVD_10950 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D TVD_13050 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D TVD_01080 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_09240 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_09495 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_01000 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_01085 multidrug transporter AcrB K18138 acrB; multidrug efflux pump
D TVD_09235 RND transporter K18138 acrB; multidrug efflux pump
D TVD_09490 acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D TVD_00705 type I secretion protein TolC K12340 tolC; outer membrane protein
D TVD_05430 transporter K12340 tolC; outer membrane protein
D TVD_07650 hypothetical protein K12340 tolC; outer membrane protein
D TVD_07225 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tvr01000]
C 01001 Protein kinases [BR:tvr01001]
D TVD_04390 kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D TVD_08790 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D TVD_07660 serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D TVD_00310 protein tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D TVD_08345 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TVD_01570 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TVD_13425 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D TVD_12990 histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D TVD_01300 histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D TVD_02990 histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D TVD_00645 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TVD_06350 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TVD_12615 histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D TVD_07165 serine/threonine protein phosphatase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tvr01009]
D TVD_12595 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TVD_11735 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D TVD_13360 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:tvr01002]
D TVD_00565 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36]
D TVD_02255 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TVD_13265 hypothetical protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D TVD_03190 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TVD_01345 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D TVD_05545 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TVD_01755 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TVD_13600 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TVD_00355 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TVD_00385 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TVD_13785 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TVD_08680 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TVD_11230 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D TVD_08770 hypothetical protein K07052 K07052; CAAX protease family protein
D TVD_02050 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D TVD_13470 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D TVD_12440 peptidase M15 K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D TVD_12790 zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D TVD_06820 cytochrome C oxidase subunit II K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TVD_02585 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TVD_06835 peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D TVD_07290 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D TVD_09975 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D TVD_03555 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TVD_11185 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D TVD_10670 peptidase M48 K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D TVD_07250 peptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D TVD_00990 hypothetical protein K09933 mtfA; MtfA peptidase
D TVD_10950 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D TVD_00150 serine endoprotease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D TVD_02080 alginate regulatory protein K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D TVD_11040 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TVD_11600 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D TVD_10345 Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D TVD_10335 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D TVD_08600 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D TVD_08300 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D TVD_10935 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TVD_13615 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TVD_11235 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D TVD_06425 peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-]
D TVD_08695 peptidase S49 K04774 sohB; serine protease SohB [EC:3.4.21.-]
D TVD_06555 membrane protein K07059 K07059; rhomboid family protein
D TVD_13640 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D TVD_13165 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TVD_10205 pmbA; peptidase PmbA K03592 pmbA; PmbA protein
D TVD_10215 tldD; protease TldD K03568 tldD; TldD protein
D TVD_10895 membane protease HflC K04087 hflC; modulator of FtsH protease HflC
D TVD_10900 membrane protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:tvr01003]
D TVD_03005 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D TVD_05410 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D TVD_05665 penicillin-binding protein K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D TVD_01800 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TVD_07690 NdvB K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D TVD_00435 glycosyl transferase K16562 exoW; succinoglycan biosynthesis protein ExoW [EC:2.4.-.-]
D TVD_09395 N-acetylglucosaminyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tvr01005]
D TVD_07225 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D TVD_07220 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D TVD_02215 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D TVD_07235 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D TVD_10810 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D TVD_04375 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D TVD_12190 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TVD_01325 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TVD_01160 membrane protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D TVD_12185 hypothetical protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D TVD_07155 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D TVD_04385 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D TVD_01900 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D TVD_01905 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D TVD_05220 lipid carrier : UDP-N-acetylgalactosaminyltransferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tvr01011]
D TVD_01955 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TVD_02190 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TVD_02185 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TVD_02170 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TVD_02155 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TVD_02195 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TVD_10840 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TVD_02165 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TVD_02180 murG; UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TVD_06920 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TVD_04195 phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TVD_00580 membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D TVD_01800 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TVD_05665 penicillin-binding protein K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D TVD_11060 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TVD_02150 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TVD_11040 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TVD_11600 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D TVD_05410 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D TVD_12440 peptidase M15 K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D TVD_06835 peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D TVD_12730 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D TVD_11050 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D TVD_11430 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D TVD_09580 lytic transglycosylase K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D TVD_03050 murein transglycosylase K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D TVD_06705 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D TVD_11045 lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D TVD_11455 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TVD_01180 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:tvr01004]
D TVD_06735 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TVD_08535 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TVD_11555 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D TVD_06720 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TVD_06730 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVD_11570 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TVD_04445 3-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D TVD_07230 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TVD_11535 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TVD_10310 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TVD_06905 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D TVD_02600 acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D TVD_13295 stearoyl-CoA 9-desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D TVD_07725 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D TVD_03980 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TVD_09795 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TVD_08540 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D TVD_12870 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TVD_00010 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:tvr01008]
C 01006 Prenyltransferases [BR:tvr01006]
D TVD_11835 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D TVD_03150 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D TVD_07265 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TVD_07360 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D TVD_11445 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TVD_09005 NAD(P)H dehydrogenase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D TVD_12330 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:tvr01007]
D TVD_04790 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TVD_10800 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TVD_04320 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D TVD_11910 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TVD_09650 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TVD_09780 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TVD_01590 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TVD_04620 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TVD_00570 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TVD_11500 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TVD_02540 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TVD_05335 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TVD_10020 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TVD_04930 histidinol dehydrogenase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TVD_13800 glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D TVD_00005 glyS; glycyl-tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D TVD_07470 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TVD_10080 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TVD_07985 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TVD_09190 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TVD_07965 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TVD_07960 phenylalanyl-tRNA synthetase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TVD_06645 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TVD_05735 glutamate-pyruvate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D TVD_07765 succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D TVD_06500 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVD_01975 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TVD_12355 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D TVD_08405 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TVD_06675 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D TVD_11980 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D TVD_11035 cytochrome C550 K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D TVD_12240 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TVD_04205 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TVD_06485 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:tvr00194]
D TVD_13590 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D TVD_13585 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D TVD_13580 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D TVD_13575 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D TVD_13570 ATP synthase F0F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D TVD_13565 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D TVD_13560 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D TVD_13555 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TVD_13550 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tvr03000]
D TVD_08025 hypothetical protein K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D TVD_01065 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D TVD_00965 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D TVD_09410 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D TVD_03070 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D TVD_03820 TetR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
D TVD_08595 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D TVD_13755 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D TVD_04835 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D TVD_11385 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D TVD_00780 transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D TVD_00080 Fur family transcriptional regulator K09826 irr; Fur family transcriptional regulator, iron response regulator
D TVD_12480 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TVD_04520 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TVD_04655 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D TVD_13245 cyclic nucleotide-binding protein K13642 ftrB; CRP/FNR family transcriptional regulator, transcriptional activator FtrB
D TVD_05555 transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D TVD_04870 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D TVD_06930 BadM/Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D TVD_07550 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D TVD_07760 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D TVD_07795 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D TVD_01200 porin K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D TVD_06235 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D TVD_08105 Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D TVD_03975 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D TVD_01995 transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D TVD_13545 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TVD_12910 NusG antitermination factor K05785 rfaH; transcriptional antiterminator RfaH
D TVD_11645 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor
D TVD_11860 glycine cleavage system protein R K03567 gcvR; glycine cleavage system transcriptional repressor
D TVD_08615 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D TVD_12675 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D TVD_08325 hypothetical protein K07733 alpA; prophage regulatory protein
D TVD_12665 hypothetical protein K07735 algH; putative transcriptional regulator
D TVD_04325 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D TVD_08045 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D TVD_12385 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D TVD_04240 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D TVD_02135 protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:tvr03021]
D TVD_02480 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TVD_02325 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TVD_02330 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TVD_03135 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D TVD_01745 RNA polymerase subunit sigma-70 K03086 rpoD; RNA polymerase primary sigma factor
D TVD_05725 RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D TVD_10970 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TVD_12815 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor
D TVD_01880 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D TVD_06335 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D TVD_03670 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D TVD_04265 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D TVD_02300 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D TVD_02105 stringent starvation protein A K03599 sspA; stringent starvation protein A
D TVD_02110 starvation protein B K03600 sspB; stringent starvation protein B
D TVD_07670 serine/threonine protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D TVD_07660 serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D TVD_10965 anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA
D TVD_10960 sigma E regulatory protein, MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D TVD_10955 positive regulator of sigma E, RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
D TVD_04325 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D TVD_08045 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D TVD_12385 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D TVD_03540 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D TVD_00100 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TVD_00105 transcriptional antiterminator, Rof K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:tvr03019]
D TVD_06410 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D TVD_10230 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D TVD_10925 double-stranded RNA-binding protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TVD_10875 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TVD_04080 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D TVD_00090 RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D TVD_05305 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TVD_07570 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TVD_10435 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TVD_07150 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TVD_03695 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TVD_00100 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TVD_11635 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D TVD_12285 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TVD_11440 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D TVD_07815 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D TVD_11365 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D TVD_11955 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D TVD_09180 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D TVD_01860 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ
D TVD_01580 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D TVD_02975 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:tvr03011]
D TVD_06520 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D TVD_07285 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D TVD_02390 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D TVD_02475 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D TVD_02445 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D TVD_10865 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D TVD_02340 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D TVD_02430 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D TVD_11155 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D TVD_02355 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D TVD_02470 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D TVD_02335 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D TVD_02465 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D TVD_02425 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D TVD_03690 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D TVD_11780 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D TVD_02405 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D TVD_10860 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D TVD_02380 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D TVD_13160 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D TVD_01775 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D TVD_02310 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D TVD_02375 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D TVD_02360 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D TVD_02365 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D TVD_02420 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D TVD_02435 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D TVD_10850 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D TVD_02315 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D TVD_02305 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D TVD_02320 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D TVD_11160 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D TVD_02410 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D TVD_02455 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D TVD_02395 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D TVD_02485 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D TVD_02440 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D TVD_11765 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D TVD_07970 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D TVD_03155 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D TVD_02385 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D TVD_02370 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D TVD_02415 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D TVD_03160 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D TVD_10260 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D TVD_02400 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D TVD_02450 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D TVD_12770 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D TVD_08545 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D TVD_10265 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D TVD_13500 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D TVD_07975 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D TVD_12075 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D TVD_11885 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TVD_11905 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TVD_11890 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tvr03009]
D TVD_10925 double-stranded RNA-binding protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TVD_04390 kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D TVD_04080 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D TVD_10920 GTPase Era K03595 era; GTPase
D TVD_03165 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D TVD_04325 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D TVD_08045 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D TVD_12385 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D TVD_03670 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D TVD_04265 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D TVD_02300 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D TVD_11090 ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D TVD_01290 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D TVD_12535 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D TVD_12785 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D TVD_12605 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D TVD_13535 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TVD_02140 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D TVD_02130 tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D TVD_07435 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D TVD_10870 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D TVD_03550 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D TVD_02570 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D TVD_11740 protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D TVD_09620 RNA methylase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D TVD_06215 ribosomal RNA large subunit methyltransferase M K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D TVD_04915 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D TVD_04350 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D TVD_08665 RNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D TVD_06415 pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D TVD_11310 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TVD_12735 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D TVD_10480 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D TVD_08715 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D TVD_11775 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D TVD_01215 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D TVD_10420 SAM-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D TVD_06805 cupin K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D TVD_06410 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D TVD_10230 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D TVD_12670 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D TVD_07570 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TVD_04065 ribosome small subunit-dependent GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TVD_04945 GTPase Der K03977 engA; GTPase
D TVD_11435 GTPase HflX K03665 hflX; GTPase
D TVD_01255 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TVD_03130 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TVD_03680 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D TVD_03665 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D TVD_02565 Iojap K09710 ybeB; ribosome-associated protein
D TVD_02515 heat-shock protein K07042 ybeY; probable rRNA maturation factor
D TVD_03545 RNA-binding protein K07574 yhbY; RNA-binding protein
D TVD_01875 ribosome hibernation promoting factor HPF K05808 hpf; ribosome hibernation promoting factor
D TVD_12065 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase
D TVD_08550 metal-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:tvr03016]
D TVD_00715 cca; 2', 3'-cyclic nucleotide 2'-phosphodiesterase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D TVD_04790 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TVD_10080 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TVD_00570 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TVD_02540 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TVD_04620 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TVD_01590 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TVD_05335 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TVD_10020 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TVD_09190 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TVD_07985 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TVD_07470 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TVD_09780 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TVD_11500 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TVD_04930 histidinol dehydrogenase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TVD_07965 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TVD_07960 phenylalanyl-tRNA synthetase K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TVD_11910 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TVD_09650 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TVD_13610 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D TVD_04055 zinc-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D TVD_00060 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D TVD_05505 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D TVD_03685 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D TVD_05685 pseudouridine synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D TVD_04875 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TVD_01255 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TVD_11445 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TVD_13520 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D TVD_13530 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TVD_00855 3'-5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D TVD_13505 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D TVD_13805 bacterial RNase P K01978 rnpB; M1 RNA
D TVD_03315 hypothetical protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5]
D TVD_12055 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D TVD_00125 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D TVD_12175 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D TVD_04305 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D TVD_09370 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D TVD_13800 glycyl-tRNA synthetase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D TVD_00005 glyS; glycyl-tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D TVD_04320 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D TVD_10800 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TVD_08730 YbaK/prolyl-tRNA synthetase associated protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D TVD_05600 cytidine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D TVD_06810 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D TVD_01205 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D TVD_02505 hypothetical protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D TVD_11770 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D TVD_04860 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D TVD_12975 rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D TVD_06765 tRNA 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TVD_13625 potassium ABC transporter ATPase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D TVD_10655 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D TVD_04885 iscA; iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein
D TVD_08065 glycine cleavage system protein T K06980 ygfZ; tRNA-modifying protein YgfZ
D TVD_06840 hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D TVD_05620 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D TVD_00830 queuosine synthesis-like protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D TVD_10370 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D TVD_11845 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TVD_10375 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D TVD_05045 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D TVD_11470 epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D TVD_05625 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D TVD_07190 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D TVD_00660 hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D TVD_05680 peptidase M22 K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D TVD_12875 UGMP family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D TVD_11460 ATPase YjeE, to have essential role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D TVD_00020 MoeB K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D TVD_10875 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TVD_03695 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TVD_05205 nucleotide-binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:tvr03012]
D TVD_03675 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D TVD_07980 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D TVD_00975 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D TVD_07280 elongation factor Ts K02357 tsf; elongation factor Ts
D TVD_02285 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D TVD_02350 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D TVD_02345 fusA; elongation factor G K02355 fusA; elongation factor G
D TVD_12110 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D TVD_07270 ribosome-recycling factor K02838 frr; ribosome recycling factor
D TVD_12115 protein-(glutamine-N5) methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D TVD_12070 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D TVD_06740 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D TVD_11610 elongation factor P K02356 efp; elongation factor P
D TVD_11605 lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D TVD_11615 lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D TVD_05330 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D TVD_10470 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D TVD_10460 class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:tvr03110]
D TVD_06745 clpA; Clp protease ClpX K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D TVD_11300 protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D TVD_10340 Clp protease ATP-binding protein K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D TVD_13635 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D TVD_11735 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D TVD_11635 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D TVD_04895 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D TVD_12285 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TVD_11630 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TVD_00145 cytochrome C biogenesis protein K05516 cbpA; curved DNA-binding protein
D TVD_04890 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D TVD_12135 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D TVD_11640 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D TVD_00140 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein
D TVD_11375 tRNA synthetase RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D TVD_12290 molecular chaperone GroES K04078 groES; chaperonin GroES
D TVD_10950 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D TVD_03555 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TVD_13555 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TVD_11260 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D TVD_09675 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D TVD_13310 hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D TVD_10805 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D TVD_10315 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D TVD_00560 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D TVD_11730 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D TVD_09670 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D TVD_11080 molecular chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D TVD_00095 thioredoxin K03671 TXN; thioredoxin
D TVD_01175 glutaredoxin K03671 TXN; thioredoxin
D TVD_11995 thioredoxin K03671 TXN; thioredoxin
D TVD_08890 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D TVD_02655 thioredoxin K05838 ybbN; putative thioredoxin
D TVD_11255 glutaredoxin K03676 grxC; glutaredoxin 3
D TVD_12060 glutaredoxin K07390 grxD; monothiol glutaredoxin
D TVD_13050 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D TVD_02645 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TVD_12320 thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:tvr04131]
D TVD_04910 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TVD_03385 membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D TVD_02775 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D TVD_06205 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVD_12580 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TVD_12570 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVD_03915 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVD_11735 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D TVD_09700 ABC transporter permease K06902 UMF1; MFS transporter, UMF1 family
D TVD_12560 hypothetical protein K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
C 04121 Ubiquitin system
C 03051 Proteasome [BR:tvr03051]
D TVD_11735 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:tvr03032]
D TVD_11420 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D TVD_05285 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D TVD_10330 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta
D TVD_07955 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D TVD_06525 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D TVD_13495 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D TVD_10845 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TVD_01750 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TVD_02500 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TVD_07200 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TVD_13490 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TVD_02580 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TVD_02550 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TVD_06695 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TVD_11415 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVD_03985 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVD_04040 DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TVD_07205 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TVD_13015 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TVD_05060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TVD_10125 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D TVD_06480 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TVD_13480 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TVD_11190 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TVD_02660 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TVD_01260 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tvr03036]
D TVD_10925 double-stranded RNA-binding protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TVD_06205 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVD_10330 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta
D TVD_07955 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D TVD_06525 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D TVD_00145 cytochrome C biogenesis protein K05516 cbpA; curved DNA-binding protein
D TVD_13495 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D TVD_06565 DNA-binding protein K11940 hspQ; heat shock protein HspQ
D TVD_01200 porin K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D TVD_11440 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D TVD_08595 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D TVD_05050 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D TVD_09645 rifampin ADP-ribosyl transferase K05896 scpA; segregation and condensation protein A
D TVD_09640 chromosome segregation and condensation protein ScpB K06024 scpB; segregation and condensation protein B
D TVD_02205 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TVD_07145 septum formation initiator K05589 ftsB; cell division protein FtsB
D TVD_12805 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D TVD_02150 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TVD_03365 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D TVD_02145 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D TVD_02200 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D TVD_02175 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D TVD_12810 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D TVD_02210 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TVD_05055 cell division protein ZipA K03528 zipA; cell division protein ZipA
D TVD_09995 Z-ring-associated protein ZapA K09888 zapA; cell division protein ZapA
D TVD_09990 hypothetical protein K09892 zapB; cell division protein ZapB
D TVD_02245 hypothetical protein K18778 zapD; cell division protein ZapD
D TVD_11455 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TVD_01080 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_09240 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_09495 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_01000 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_09525 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D TVD_09520 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D TVD_09515 cell division topological specificity factor K03608 minE; cell division topological specificity factor
D TVD_12155 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D TVD_12160 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D TVD_12165 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D TVD_11055 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D TVD_00635 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D TVD_13540 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D TVD_09820 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D TVD_06370 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein
D TVD_09430 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D TVD_13545 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TVD_11190 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TVD_02660 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TVD_13530 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TVD_13535 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TVD_13645 recombinase XerC K03733 xerC; integrase/recombinase XerC
D TVD_02640 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D TVD_04625 ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D TVD_13030 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:tvr03400]
D TVD_11760 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D TVD_04825 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D TVD_00175 DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D TVD_04570 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TVD_05285 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D TVD_11370 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TVD_02240 thiamine monophosphate synthase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TVD_01140 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TVD_04830 deoxyribodipyrimidine photolyase K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D TVD_08525 SPO1 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TVD_10485 DNA polymerase III K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TVD_10285 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D TVD_01330 DNA-(apurinic or apyrimidinic site) lyase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D TVD_13740 DNA-(apurinic or apyrimidinic site) lyase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TVD_13465 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TVD_05060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TVD_13015 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TVD_02490 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D TVD_06650 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D TVD_08510 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D TVD_13150 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TVD_02325 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TVD_02330 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TVD_02480 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TVD_03135 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D TVD_06435 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TVD_09225 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TVD_10515 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D TVD_11450 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D TVD_03175 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D TVD_11830 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TVD_07200 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TVD_13490 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TVD_02580 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TVD_02550 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TVD_06695 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TVD_11415 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVD_03985 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TVD_04040 DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TVD_02500 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TVD_05275 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D TVD_05270 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D TVD_05280 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D TVD_09205 recombinase RecA K03553 recA; recombination protein RecA
D TVD_10000 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TVD_10415 ruvB; ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TVD_10005 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TVD_01595 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D TVD_04395 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D TVD_04400 hypothetical protein K03547 sbcD; DNA repair protein SbcD/Mre11
D TVD_11800 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D TVD_13485 hypothetical protein K03629 recF; DNA replication and repair protein RecF
D TVD_11225 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TVD_10915 recombinase RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D TVD_04050 recR; recombination protein RecR K06187 recR; recombination protein RecR
D TVD_11655 recombination and repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D TVD_06480 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TVD_13480 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TVD_01260 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D TVD_10330 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta
D TVD_01200 porin K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D TVD_07955 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D TVD_06525 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D TVD_10435 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TVD_08600 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D TVD_08300 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D TVD_08605 SOS cell division inhibitor SulA K14160 imuA; protein ImuA
D TVD_08610 hypothetical protein K14161 imuB; protein ImuB
D TVD_05845 DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D TVD_09200 RecX family transcriptional regulator K03565 recX; regulatory protein
D TVD_01170 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D TVD_05675 helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D TVD_01980 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D TVD_09145 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TVD_09140 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:tvr03029]
D TVD_02095 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D TVD_03675 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D TVD_07980 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D TVD_07280 elongation factor Ts K02357 tsf; elongation factor Ts
D TVD_02285 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D TVD_02350 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D TVD_02345 fusA; elongation factor G K02355 fusA; elongation factor G
D TVD_10920 GTPase Era K03595 era; GTPase
D TVD_11910 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TVD_02540 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TVD_10020 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TVD_01590 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TVD_12145 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TVD_12140 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TVD_12150 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TVD_02500 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TVD_07245 membrane protein K07277 SAM50; outer membrane protein insertion porin family
D TVD_11635 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D TVD_11640 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D TVD_12285 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TVD_12290 molecular chaperone GroES K04078 groES; chaperonin GroES
D TVD_11630 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TVD_10990 Zn-dependent hydrolase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
D TVD_04875 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TVD_04890 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D TVD_12060 glutaredoxin K07390 grxD; monothiol glutaredoxin
D TVD_04625 ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D TVD_13515 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TVD_13025 electron transporter SenC K07152 SCO1; protein SCO1
D TVD_11735 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tvr02000]
D TVD_04365 lipid transporter ATP-binding/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D TVD_00420 ABC transporter ATP-binding protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D TVD_04440 peptidase C39 K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D TVD_10455 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D TVD_00670 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D TVD_03970 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D TVD_03965 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein
D TVD_03960 molybdenum ABC transporter ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D TVD_03405 bicarbonate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D TVD_08110 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D TVD_03410 bicarbonate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D TVD_08115 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D TVD_03415 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TVD_08120 nitrate ABC transporter ATPase K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TVD_12250 iron deficiency-induced protein A K02012 afuA; iron(III) transport system substrate-binding protein
D TVD_12255 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D TVD_12260 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D TVD_10550 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D TVD_10555 glycine/betaine ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D TVD_10560 glycine/betaine ABC transporter ATPase K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D TVD_07675 thiamine biosynthesis protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D TVD_08095 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D TVD_08100 nitrate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D TVD_08090 ABC transporter K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D TVD_01380 ABC transporter permease K02069 STAR2; UDP-glucose/iron transport system permease protein
D TVD_01375 ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D TVD_01940 organic solvent ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D TVD_05585 cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D TVD_01935 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TVD_05575 ABC transport system permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TVD_01930 toluene ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TVD_05580 polyamine ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TVD_05590 hypothetical protein K18480 linN; cholesterol transport system auxiliary component
D TVD_01945 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D TVD_01950 anti-sigma-factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D TVD_08350 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TVD_08355 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D TVD_08360 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D TVD_08365 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D TVD_07185 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D TVD_07680 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D TVD_03355 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D TVD_10305 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TVD_10300 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TVD_10295 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TVD_10290 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TVD_07105 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D TVD_07110 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D TVD_07115 ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D TVD_04140 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D TVD_04150 membrane protein K09816 znuB; zinc transport system permease protein
D TVD_04145 zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D TVD_00765 ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D TVD_00755 ABC transporter K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D TVD_00760 ABC transporter K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D TVD_02590 permease K07091 lptF; lipopolysaccharide export system permease protein
D TVD_02595 permease K11720 lptG; lipopolysaccharide export system permease protein
D TVD_01885 sugar ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D TVD_09615 nodulation protein NodJ K09694 nodJ; lipooligosaccharide transport system permease protein
D TVD_09610 ABC transporter K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D TVD_03840 ABC transporter K18233 oleC5; oleandomycin transport system permease protein
D TVD_03845 ABC transporter K18232 oleC4; oleandomycin transport system ATP-binding protein
D TVD_06455 cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein
D TVD_06460 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D TVD_12810 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D TVD_12805 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D TVD_06830 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D TVD_04720 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D TVD_06825 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TVD_04715 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TVD_06915 lysophospholipase L1 biosynthesis ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D TVD_07635 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D TVD_08440 ABC transporter, permease K02004 ABC.CD.P; putative ABC transport system permease protein
D TVD_02965 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D TVD_06910 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TVD_07640 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TVD_08445 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TVD_02960 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TVD_08395 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D TVD_03520 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D TVD_05455 MFS transporter permease K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D TVD_13745 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D TVD_12495 Bcr/CflA subfamily drug resistance transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D TVD_09700 ABC transporter permease K06902 UMF1; MFS transporter, UMF1 family
D TVD_11950 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D TVD_01850 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D TVD_01855 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D TVD_01870 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D TVD_03920 hypothetical protein K10716 kch; voltage-gated potassium channel
D TVD_02770 potassium transporter TrkA K10716 kch; voltage-gated potassium channel
D TVD_08575 voltage-gated sodium channel K08714 VGSC; voltage-gated sodium channel
D TVD_01370 ammonium transporter K03320 amt; ammonium transporter, Amt family
D TVD_11380 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D TVD_02105 stringent starvation protein A K03599 sspA; stringent starvation protein A
D TVD_01710 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D TVD_07420 membrane protein K19416 yccA; modulator of FtsH protease
D TVD_03850 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D TVD_09210 mechanosensitive ion channel protein MscS K05802 mscK; potassium-dependent mechanosensitive channel
D TVD_03280 hypothetical protein K03442 mscS; small conductance mechanosensitive channel
D TVD_05405 mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel
D TVD_08450 magnesium transporter K06213 mgtE; magnesium transporter
D TVD_08455 magnesium transporter K06213 mgtE; magnesium transporter
D TVD_09735 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D TVD_06870 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D TVD_06360 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D TVD_09740 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D TVD_06875 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D TVD_06365 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D TVD_12035 flagellar motor protein MotB K21218 motY; sodium-type flagellar protein MotY
D TVD_04355 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB
D TVD_11715 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB
D TVD_04360 biopolymer transporter K03559 exbD; biopolymer transport protein ExbD
D TVD_11710 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D TVD_10405 protein tolQ K03562 tolQ; biopolymer transport protein TolQ
D TVD_10400 biopolymer transporter TolR K03560 tolR; biopolymer transport protein TolR
D TVD_02885 magnesium transporter K03284 corA; magnesium transporter
D TVD_07475 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D TVD_03740 Mg2+ and Co2+ transporter CorB K16302 CNNM; metal transporter CNNM
D TVD_11795 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D TVD_01010 flagellar motor protein MotB K16079 omp31; outer membrane immunogenic protein
D TVD_05990 membrane protein K16079 omp31; outer membrane immunogenic protein
D TVD_08235 membrane protein K16079 omp31; outer membrane immunogenic protein
D TVD_08275 membrane protein K16079 omp31; outer membrane immunogenic protein
D TVD_04770 porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D TVD_12280 flagellar motor protein MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family
D TVD_10585 SalD K06076 fadL; long-chain fatty acid transport protein
D TVD_03035 aromatic hydrocarbon degradation protein K06076 fadL; long-chain fatty acid transport protein
D TVD_11705 membrane protein K16091 fecA; Fe(3+) dicitrate transport protein
D TVD_04670 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D TVD_07540 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D TVD_12950 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D TVD_02685 transporter K15725 czcC; outer membrane protein, heavy metal efflux system
D TVD_02060 transporter K15725 czcC; outer membrane protein, heavy metal efflux system
D TVD_00705 type I secretion protein TolC K12340 tolC; outer membrane protein
D TVD_05430 transporter K12340 tolC; outer membrane protein
D TVD_07650 hypothetical protein K12340 tolC; outer membrane protein
D TVD_09230 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D TVD_00240 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein
D TVD_07245 membrane protein K07277 SAM50; outer membrane protein insertion porin family
D TVD_04940 lipoprotein K17713 bamB; outer membrane protein assembly factor BamB
D TVD_11870 outer membrane protein NlpB K07287 bamC; outer membrane protein assembly factor BamC
D TVD_11315 competence protein ComL K05807 bamD; outer membrane protein assembly factor BamD
D TVD_01640 hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D TVD_11390 membrane protein SmpA K06186 bamE; outer membrane protein assembly factor BamE
D TVD_12265 membrane protein K07278 tamA; translocation and assembly module TamA
D TVD_12270 hypothetical protein K09800 tamB; translocation and assembly module TamB
D TVD_01890 lipopolysaccharide transporter K09774 lptA; lipopolysaccharide export system protein LptA
D TVD_01895 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D TVD_11075 organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D TVD_02545 Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D TVD_02520 magnesium/cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D TVD_04095 membrane protein K07238 TC.ZIP; zinc transporter, ZIP family
D TVD_01085 multidrug transporter AcrB K18138 acrB; multidrug efflux pump
D TVD_09235 RND transporter K18138 acrB; multidrug efflux pump
D TVD_09490 acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D TVD_04560 acriflavin resistance protein K18989 vexF; multidrug efflux pump
D TVD_09055 membrane protein K03298 TC.DME; drug/metabolite transporter, DME family
D TVD_09020 L-lactate permease K03303 lutP; lactate permease
D TVD_11280 choline transporter K02168 betT; choline/glycine/proline betaine transport protein
D TVD_03340 choline transporter K02168 betT; choline/glycine/proline betaine transport protein
D TVD_12780 choline transporter K02168 betT; choline/glycine/proline betaine transport protein
D TVD_09355 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D TVD_01910 calcium/sodium:proton antiporter K07301 yrbG; cation:H+ antiporter
D TVD_13775 urea transporter K20989 DUR3; urea-proton symporter
D TVD_03995 sodium:solute symporter K14393 actP; cation/acetate symporter
D TVD_01165 sodium:proton exchanger K11105 cvrA; potassium/hydrogen antiporter
D TVD_01315 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D TVD_01310 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein
D TVD_04280 cytosine permease K10974 codB; cytosine permease
D TVD_13225 chromate transporter K07240 chrA; chromate transporter
D TVD_07415 DNA repair protein K03321 TC.SULP; sulfate permease, SulP family
D TVD_12940 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D TVD_05345 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D TVD_04955 Na+/Picotransporter K03324 yjbB; phosphate:Na+ symporter
D TVD_03325 Na/Pi-cotransporter II-like protein K03324 yjbB; phosphate:Na+ symporter
D TVD_07750 arsenic transporter K03325 ACR3; arsenite transporter
D TVD_09250 bile acid:sodium symporter K03325 ACR3; arsenite transporter
D TVD_04465 cation:proton antiporter K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D TVD_04470 monovalent cation/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D TVD_04475 monovalent cation/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D TVD_09325 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D TVD_04480 NADH/ubiquinone/plastoquinone K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D TVD_09335 NADH dehydrogenase K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D TVD_04485 cation:proton antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D TVD_09305 cation transporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D TVD_04490 pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D TVD_09310 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D TVD_04495 sodium:proton antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D TVD_09315 cation:proton antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D TVD_00580 membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D TVD_11990 transporter K24180 mleP; malate permease and related proteins
D TVD_10235 permase K03548 perM; putative permease
D TVD_04335 antibiotic resistance protein MarC K05595 marC; multiple antibiotic resistance protein
D TVD_07535 antibiotic resistance protein MarC K05595 marC; multiple antibiotic resistance protein
D TVD_02175 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D TVD_03385 membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D TVD_02775 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D TVD_09790 nickel transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D TVD_12660 energy transducer TonB K03832 tonB; periplasmic protein TonB
D TVD_10385 lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D TVD_10395 cell envelope protein TolA K03646 tolA; colicin import membrane protein
D TVD_10390 translocation protein TolB K03641 tolB; TolB protein
D TVD_02680 RND transporter K15727 czcB; membrane fusion protein, heavy metal efflux system
D TVD_04435 hypothetical protein K11003 hlyD; membrane fusion protein, hemolysin D
D TVD_01080 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_09240 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_09495 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_01000 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_10070 RND transporter K21136 triA; membrane fusion protein, multidrug efflux system
D TVD_04555 RND transporter K18990 vexE; membrane fusion protein, multidrug efflux system
D TVD_00310 protein tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D TVD_00305 lipopolysaccharide biosynthesis protein K25590 epsF; protein tyrosine kinase modulator
D TVD_05445 TspO K05770 TSPO; translocator protein
D TVD_03275 magnesium transporter MgtC K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D TVD_02075 copper resistance protein CopD K07245 pcoD; copper resistance protein D
D TVD_02070 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:tvr02044]
D TVD_04440 peptidase C39 K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D TVD_04435 hypothetical protein K11003 hlyD; membrane fusion protein, hemolysin D
D TVD_00705 type I secretion protein TolC K12340 tolC; outer membrane protein
D TVD_05430 transporter K12340 tolC; outer membrane protein
D TVD_07650 hypothetical protein K12340 tolC; outer membrane protein
D TVD_00320 ATPase K02450 gspA; general secretion pathway protein A
D TVD_01700 hypothetical protein K02452 gspC; general secretion pathway protein C
D TVD_01695 general secretion pathway protein GspD K02453 gspD; general secretion pathway protein D
D TVD_01690 general secretion pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TVD_01685 general secretion pathway protein GspF K02455 gspF; general secretion pathway protein F
D TVD_01680 secretion system protein G K02456 gspG; general secretion pathway protein G
D TVD_01675 hypothetical protein K02457 gspH; general secretion pathway protein H
D TVD_01670 general secretion pathway protein GspI K02458 gspI; general secretion pathway protein I
D TVD_01665 hypothetical protein K02459 gspJ; general secretion pathway protein J
D TVD_01660 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D TVD_01655 hypothetical protein K02461 gspL; general secretion pathway protein L
D TVD_01650 hypothetical protein K02462 gspM; general secretion pathway protein M
D TVD_01645 hypothetical protein K02463 gspN; general secretion pathway protein N
D TVD_02255 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TVD_02265 general secretion pathway protein GspE K02652 pilB; type IV pilus assembly protein PilB
D TVD_02260 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D TVD_01415 methylation site containing protein K02655 pilE; type IV pilus assembly protein PilE
D TVD_04920 pilus assembly protein PilW K02656 pilF; type IV pilus assembly protein PilF
D TVD_12635 pilus assembly protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D TVD_12630 chemotaxis protein CheY K02658 pilH; twitching motility two-component system response regulator PilH
D TVD_12625 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D TVD_12620 chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D TVD_01805 fimbrial assembly protein K02662 pilM; type IV pilus assembly protein PilM
D TVD_01810 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D TVD_01815 pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D TVD_01820 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D TVD_01825 pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D TVD_12705 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D TVD_12695 twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D TVD_12700 twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D TVD_01440 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV
D TVD_01435 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D TVD_01430 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX
D TVD_01420 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D TVD_06690 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D TVD_01445 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D TVD_05495 fimbrial protein FimV K08086 fimV; pilus assembly protein FimV
D TVD_00810 membrane protein K02221 yggT; YggT family protein
D TVD_06545 competence protein ComEA K02237 comEA; competence protein ComEA
D TVD_06470 competence protein ComEC K02238 comEC; competence protein ComEC
D TVD_06320 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TVD_06315 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TVD_06395 hypothetical protein K04061 flhB2; flagellar biosynthesis protein
D TVD_06250 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TVD_06260 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D TVD_06265 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TVD_06290 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D TVD_06295 permease K02418 fliO; flagellar protein FliO/FliZ
D TVD_06300 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D TVD_06305 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TVD_06310 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D TVD_02645 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TVD_01030 hypothetical protein K20528 trbC; type IV secretion system protein TrbC
D TVD_02230 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TVD_11260 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D TVD_05635 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D TVD_02295 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D TVD_05640 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D TVD_03575 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D TVD_02460 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D TVD_11785 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TVD_12800 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TVD_05630 preprotein translocase subunit YidC K03210 yajC; preprotein translocase subunit YajC
D TVD_13515 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TVD_13710 preprotein translocase K03116 tatA; sec-independent protein translocase protein TatA
D TVD_13715 twin-arginine translocation proteinsubunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D TVD_13720 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:tvr02042]
D TVD_11795 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:tvr02022]
D TVD_08345 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TVD_08340 chemotaxis protein CheY K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D TVD_01570 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TVD_01565 transcriptional regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D TVD_13425 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D TVD_13430 LytTR family transcriptional regulator K08083 algR; two-component system, LytTR family, response regulator AlgR
D TVD_12990 histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D TVD_12985 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D TVD_01300 histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D TVD_01305 nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D TVD_11170 mutant NtrC activator K07713 zraR; two-component system, NtrC family, response regulator HydG
D TVD_02990 histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D TVD_02985 chemotaxis protein CheY K02667 pilR; two-component system, NtrC family, response regulator PilR
D TVD_00255 Fis family transcriptional regulator K02481 flgR; two-component system, NtrC family, response regulator
D TVD_00645 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TVD_06350 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TVD_00650 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TVD_06340 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TVD_00615 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TVD_06355 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TVD_07710 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D TVD_07920 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D TVD_12615 histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D TVD_12635 pilus assembly protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D TVD_12630 chemotaxis protein CheY K02658 pilH; twitching motility two-component system response regulator PilH
D TVD_06240 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D TVD_07165 serine/threonine protein phosphatase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D TVD_00600 hypothetical protein K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
C 02035 Bacterial motility proteins [BR:tvr02035]
D TVD_00645 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TVD_06350 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TVD_00640 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TVD_06375 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TVD_06380 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TVD_00620 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D TVD_00625 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TVD_07915 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TVD_00615 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TVD_06355 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TVD_07710 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D TVD_00650 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TVD_06340 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TVD_06345 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D TVD_07920 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D TVD_00610 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_00665 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_00630 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_08960 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_05310 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_06925 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_03890 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_13335 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D TVD_09725 chemotaxis protein K03776 aer; aerotaxis receptor
D TVD_06260 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D TVD_06265 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TVD_06270 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D TVD_06295 permease K02418 fliO; flagellar protein FliO/FliZ
D TVD_06300 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D TVD_06305 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TVD_06310 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D TVD_06320 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TVD_06315 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TVD_06255 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TVD_06285 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TVD_06290 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D TVD_06250 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TVD_07875 flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D TVD_07925 flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D TVD_07880 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D TVD_00985 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D TVD_06280 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D TVD_06245 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D TVD_06275 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D TVD_07910 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D TVD_07905 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D TVD_07900 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D TVD_07890 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D TVD_07885 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D TVD_07870 flagellar rod assembly protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D TVD_07895 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D TVD_07865 flagellar hook protein FlgK K02396 flgK; flagellar hook-associated protein 1
D TVD_07860 flagellar hook protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D TVD_07935 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D TVD_12035 flagellar motor protein MotB K21218 motY; sodium-type flagellar protein MotY
D TVD_08970 flagellin K02406 fliC; flagellin
D TVD_07030 flagellin K02406 fliC; flagellin
D TVD_07020 flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D TVD_07015 cyclic nucleotide-binding protein K02422 fliS; flagellar secretion chaperone FliS
D TVD_07010 hypothetical protein K02423 fliT; flagellar protein FliT
D TVD_06335 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D TVD_09735 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D TVD_06870 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D TVD_06360 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA
D TVD_09740 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D TVD_06875 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D TVD_06365 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D TVD_06235 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D TVD_06240 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D TVD_07930 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D TVD_07025 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG
D TVD_06325 flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D TVD_06330 cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D TVD_04995 cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D TVD_12635 pilus assembly protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D TVD_12630 chemotaxis protein CheY K02658 pilH; twitching motility two-component system response regulator PilH
D TVD_12625 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D TVD_12620 chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D TVD_12615 histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D TVD_02985 chemotaxis protein CheY K02667 pilR; two-component system, NtrC family, response regulator PilR
D TVD_02990 histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D TVD_12705 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D TVD_12695 twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D TVD_12700 twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D TVD_12610 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC
D TVD_02265 general secretion pathway protein GspE K02652 pilB; type IV pilus assembly protein PilB
D TVD_02260 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D TVD_02255 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TVD_04920 pilus assembly protein PilW K02656 pilF; type IV pilus assembly protein PilF
D TVD_01825 pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D TVD_01820 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D TVD_01815 pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D TVD_01810 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D TVD_01805 fimbrial assembly protein K02662 pilM; type IV pilus assembly protein PilM
D TVD_06690 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D TVD_01440 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV
D TVD_01435 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D TVD_01430 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX
D TVD_01420 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D TVD_01415 methylation site containing protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tvr04812]
D TVD_12155 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D TVD_02210 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TVD_02205 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TVD_09525 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D TVD_09520 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D TVD_09515 cell division topological specificity factor K03608 minE; cell division topological specificity factor
D TVD_00635 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D TVD_13540 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D TVD_09820 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D TVD_06370 cobalamin biosynthesis protein CobQ K03496 parA; chromosome partitioning protein
D TVD_09430 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D TVD_13545 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tvr04147]
D TVD_11735 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D TVD_06205 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TVD_07150 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TVD_12580 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TVD_12575 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TVD_12570 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVD_03915 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TVD_12285 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TVD_11635 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D TVD_03010 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TVD_03185 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TVD_02285 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D TVD_02350 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D TVD_04055 zinc-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D TVD_09795 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TVD_10075 macrophage migration inhibitory factor family protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
D TVD_12595 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TVD_11070 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TVD_13420 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TVD_12030 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TVD_13215 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TVD_05365 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D TVD_13790 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TVD_01245 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D TVD_01845 carbohydrate kinase K00846 KHK; ketohexokinase [EC:2.7.1.3]
D TVD_04070 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D TVD_06490 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TVD_00870 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TVD_10160 pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_12040 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TVD_06815 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TVD_03570 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TVD_09545 membrane protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:tvr02048]
D TVD_06085 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D TVD_10720 Restriction endonuclease, type I, EcoRI, R subunit/Type III K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D TVD_13270 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D TVD_03470 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D TVD_08180 Restriction endonuclease, type I, EcoRI, R subunit/Type III K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D TVD_06065 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D TVD_10735 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D TVD_08190 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D TVD_06060 type I restriction-modification protein subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D TVD_10740 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D TVD_13285 DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D TVD_03455 type I restriction-modification protein subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D TVD_08195 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D TVD_09075 nuclease K07448 mrr; restriction system protein
D TVD_02665 addiction module antitoxin K06218 relE; mRNA interferase RelE/StbE
D TVD_02950 toxin of toxin-antitoxin system K06218 relE; mRNA interferase RelE/StbE
D TVD_03880 toxin of toxin-antitoxin system K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D TVD_02945 prevent-host-death protein K19159 yefM; antitoxin YefM
D TVD_03885 antitoxin K19159 yefM; antitoxin YefM
D TVD_05970 hypothetical protein K18843 hicB; antitoxin HicB
D TVD_08245 hypothetical protein K18843 hicB; antitoxin HicB
D TVD_05230 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB
D TVD_05235 acetoacetyl-CoA synthase K19164 ccdA; antitoxin CcdA
D TVD_05465 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D TVD_05460 CopG family transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4
D TVD_00380 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D TVD_01465 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D TVD_10085 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D TVD_03485 XRE family transcriptional regulator K21498 higA-1; antitoxin HigA-1
D TVD_00375 XRE family transcriptional regulator K21498 higA-1; antitoxin HigA-1
D TVD_01470 virulence factor K21498 higA-1; antitoxin HigA-1
D TVD_10090 pirin K21498 higA-1; antitoxin HigA-1
D TVD_05205 nucleotide-binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D TVD_02210 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TVD_12155 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D TVD_11190 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TVD_02660 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TVD_04790 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TVD_08030 nitrogen fixation protein NifU K19168 cptA; toxin CptA
D TVD_08035 hypothetical protein K09159 cptB; antitoxin CptB
D TVD_04875 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:tvr01504]
D TVD_03840 ABC transporter K18233 oleC5; oleandomycin transport system permease protein
D TVD_03845 ABC transporter K18232 oleC4; oleandomycin transport system ATP-binding protein
D TVD_12440 peptidase M15 K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D TVD_01570 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TVD_01565 transcriptional regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D TVD_01080 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_09240 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_09495 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_01000 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D TVD_01085 multidrug transporter AcrB K18138 acrB; multidrug efflux pump
D TVD_09235 RND transporter K18138 acrB; multidrug efflux pump
D TVD_09490 acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D TVD_09230 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D TVD_00705 type I secretion protein TolC K12340 tolC; outer membrane protein
D TVD_05430 transporter K12340 tolC; outer membrane protein
D TVD_07650 hypothetical protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tvr03100]
D TVD_08330 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TVD_04795 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TVD_11895 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TVD_06895 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVD_10780 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVD_07610 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVD_10775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVD_12905 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TVD_06640 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TVD_10320 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TVD_08490 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TVD_11150 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TVD_12085 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TVD_04805 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TVD_02275 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TVD_00075 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TVD_08495 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TVD_10690 tRNA-His K14226 tRNA-His; tRNA His
D TVD_11900 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TVD_05615 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVD_10355 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVD_10880 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVD_06855 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVD_03580 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TVD_10685 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TVD_10360 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TVD_12445 tRNA-Met K14230 tRNA-Met; tRNA Met
D TVD_01740 tRNA-Met K14230 tRNA-Met; tRNA Met
D TVD_03660 tRNA-Met K14230 tRNA-Met; tRNA Met
D TVD_00185 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TVD_03145 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TVD_07945 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TVD_10785 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TVD_07400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVD_09565 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVD_07410 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVD_09175 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TVD_00085 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TVD_02280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TVD_05610 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TVD_02290 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TVD_02270 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TVD_07405 tRNA-Val K14237 tRNA-Val; tRNA Val
D TVD_10325 tRNA-Val K14237 tRNA-Val; tRNA Val
D TVD_06185 tRNA-Val K14237 tRNA-Val; tRNA Val
D TVD_11905 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TVD_11890 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TVD_11885 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TVD_13805 bacterial RNase P K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D TVD_00590 alcohol dehydrogenase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D TVD_01335 hypothetical protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D TVD_05450 glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D TVD_00935 alanine dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D TVD_02035 cytochrome C K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D TVD_08965 methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D TVD_01340 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D TVD_01100 peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D TVD_01075 glutathionyl-hydroquinone reductase YqjG K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D TVD_08420 sulfoxide reductase catalytic subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D TVD_03900 oxidase K17893 AOX1; ubiquinol oxidase [EC:1.10.3.11]
D TVD_04780 cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D TVD_11855 alkyl hydroperoxide reductase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D TVD_04115 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D TVD_07125 nuclease PIN K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D TVD_01135 dihydropteridine reductase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D TVD_02065 copper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3]
D TVD_07365 desaturase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D TVD_01520 ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D TVD_11480 ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D TVD_10110 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D TVD_08815 pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D TVD_09340 NADH/ubiquinone/plastoquinone (complex I) K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D TVD_00710 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D TVD_05710 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D TVD_04660 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D TVD_05875 cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D TVD_09925 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D TVD_09535 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D TVD_07580 thiopurine S-methyltransferase K21552 HOL; methyl halide transferase [EC:2.1.1.165]
D TVD_07630 hypothetical protein K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D TVD_02525 acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D TVD_04185 glycerol acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D TVD_09160 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D TVD_05560 transglutaminase K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D TVD_00885 arginyl-tRNA--protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D TVD_04165 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D TVD_07215 erythromycin biosynthesis sensory transduction protein eryC1 K20084 gnnB; UDP-N-acetyl-3-dehydro-alpha-D-glucosamine 3-aminotranferase [EC:2.6.1.122]
D TVD_12645 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D TVD_00805 ATP/GTP-binding protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D TVD_12245 glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D TVD_07490 diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65]
D TVD_01865 aldolase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D TVD_08740 Appr-1-p processing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D TVD_10410 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D TVD_07830 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D TVD_08915 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D TVD_08975 phosphodiesterase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D TVD_00025 DNAase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D TVD_02045 preprotein translocase subunit TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D TVD_00190 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D TVD_01280 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D TVD_10220 acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D TVD_08565 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D TVD_05570 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D TVD_11465 carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D TVD_12010 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D TVD_03320 DNA ligase K07468 K07468; DNA/RNA ligase [EC:6.5.1.-]
D TVD_04590 electron transporter RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D TVD_04595 electron transporter RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D TVD_04600 electron transporter RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D TVD_12825 cation transporter K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D TVD_10530 histone deacetylase K04768 acuC; acetoin utilization protein AcuC
C 99982 Energy metabolism
D TVD_09245 ferredoxin K05524 fdxA; ferredoxin
D TVD_04585 electron transporter RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D TVD_04580 electron transport complex RsxE subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D TVD_04605 electron transporter RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D TVD_04880 scaffolding protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D TVD_09415 von Willebrand factor A K02448 norD; nitric oxide reductase NorD protein
D TVD_10535 von Willebrand factor A K02448 norD; nitric oxide reductase NorD protein
D TVD_09420 ATPase AAA K04748 norQ; nitric oxide reductase NorQ protein
D TVD_10540 ATPase AAA K04748 norQ; nitric oxide reductase NorQ protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D TVD_05030 hypothetical protein K06203 cysZ; CysZ protein
D TVD_07130 glyoxalase K08234 yaeR; glyoxylase I family protein
D TVD_12710 alanine racemase K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D TVD_06530 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
C 99987 Cofactor metabolism
D TVD_13125 ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein
D TVD_13120 sterol-binding protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D TVD_12890 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D TVD_02620 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D TVD_07325 GntR family transcriptional regulator K15977 K15977; putative oxidoreductase
D TVD_00745 acetyl-CoA synthetase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D TVD_00585 cold-shock protein K03704 cspA; cold shock protein
D TVD_10190 cold-shock protein K03704 cspA; cold shock protein
D TVD_01365 nitrogen regulatory protein P-II 1 K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
D TVD_03330 beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D TVD_06750 clpS; Clp protease ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D TVD_10350 trigger factor K03545 tig; trigger factor
D TVD_08415 sulfite oxidase K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D TVD_11410 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D TVD_13320 hydrogenase assembly protein HupF K04653 hypC; hydrogenase expression/formation protein HypC
D TVD_13325 hydrogenase formation protein HupD K04654 hypD; hydrogenase expression/formation protein HypD
D TVD_13330 hydrogenase K04655 hypE; hydrogenase expression/formation protein HypE
D TVD_13315 hypothetical protein K04656 hypF; hydrogenase maturation protein HypF
D TVD_12895 ATP-dependent protease K07391 comM; magnesium chelatase family protein
D TVD_01635 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
D TVD_03720 peptidase K07395 K07395; putative proteasome-type protease
D TVD_12475 peroxiredoxin K07397 yhfA; putative redox protein
D TVD_13040 cytochrome C biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D TVD_02630 serine protease K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D TVD_12360 hypothetical protein K03630 radC; DNA repair protein RadC
D TVD_08660 endonuclease K07457 K07457; endonuclease III related protein
D TVD_02120 endonuclease distantly related to archaeal Holliday junction resolvase K07460 yraN; putative endonuclease
D TVD_06850 hypothetical protein K07461 K07461; putative endonuclease
D TVD_07005 endonuclease K07461 K07461; putative endonuclease
D TVD_09195 endonuclease K07461 K07461; putative endonuclease
D TVD_01270 DNA processing protein DprA K04096 smf; DNA processing protein
D TVD_03375 recombination factor protein RarA K07478 ycaJ; putative ATPase
D TVD_04345 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease
D TVD_05920 transposase K07483 K07483; transposase
D TVD_11140 transposase K07483 K07483; transposase
D TVD_08305 transposase K07483 K07483; transposase
D TVD_02925 transposase K07483 K07483; transposase
D TVD_01600 transposase K07485 K07485; transposase
D TVD_08780 transposase K07485 K07485; transposase
D TVD_05175 transposase K07486 K07486; transposase
D TVD_05185 transposase K07486 K07486; transposase
D TVD_02915 transposase K07486 K07486; transposase
D TVD_09125 transposase K07491 rayT; REP-associated tyrosine transposase
D TVD_05155 transposase K07491 rayT; REP-associated tyrosine transposase
D TVD_05065 transposase K07491 rayT; REP-associated tyrosine transposase
D TVD_09955 toxin RelE K07491 rayT; REP-associated tyrosine transposase
D TVD_04845 transposase K07496 K07496; putative transposase
D TVD_05925 integrase K07497 K07497; putative transposase
D TVD_11135 integrase K07497 K07497; putative transposase
D TVD_08310 integrase K07497 K07497; putative transposase
D TVD_06170 integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D TVD_02800 sulfurtransferase K03972 pspE; phage shock protein E
D TVD_04045 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D TVD_08765 glycine/betaine ABC transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D TVD_13405 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D TVD_11405 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D TVD_04970 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D TVD_04090 transporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D TVD_05265 nucleoside:proton symporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D TVD_11240 peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D TVD_01400 GTP-binding protein TypA K06207 typA; GTP-binding protein
D TVD_06890 HPP family protein K07168 K07168; CBS domain-containing membrane protein
D TVD_02510 PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D TVD_11850 phosphate starvation protein PhoH K07175 phoH2; PhoH-like ATPase
D TVD_03990 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein
D TVD_04005 prohead protease K07182 K07182; CBS domain-containing protein
D TVD_04460 ligand-binding protein SH3 K07184 ygiM; SH3 domain protein
C 99992 Structural proteins
D TVD_03370 cell envelope biogenesis protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D TVD_12095 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D TVD_12020 ABC transporter K04754 mlaA; phospholipid-binding lipoprotein MlaA
D TVD_07240 membrane protein K06142 hlpA; outer membrane protein
D TVD_05720 peptidase M23 K06194 nlpD; lipoprotein NlpD
D TVD_05785 membrane protein K07275 ompW; outer membrane protein
D TVD_12455 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D TVD_00925 hypothetical protein K07285 slp; outer membrane lipoprotein
D TVD_00930 membrane protein K07285 slp; outer membrane lipoprotein
D TVD_00170 AsmA family protein K07289 asmA; AsmA protein
D TVD_02970 RND transporter K02005 ABC.CD.TX; HlyD family secretion protein
D TVD_07645 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D TVD_04925 XRE family transcriptional regulator K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D TVD_08370 transcriptional regulator PhoU K02039 phoU; phosphate transport system protein
D TVD_12315 dihydroorotate dehydrogenase K03926 cutA; periplasmic divalent cation tolerance protein
D TVD_11100 magnesium transporter ApaG K06195 apaG; ApaG protein
D TVD_07455 frataxin K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D TVD_02830 hypothetical protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D TVD_05540 colicin V production CvpA K03558 cvpA; membrane protein required for colicin V production
D TVD_08295 helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D TVD_12725 globin K06886 glbN; hemoglobin
D TVD_08905 Patatin K07001 K07001; NTE family protein
D TVD_02900 serine protease K07001 K07001; NTE family protein
D TVD_11920 iron--sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D TVD_09555 hydrolase K07038 K07038; inner membrane protein
D TVD_04540 ribonuclease BN K07058 K07058; membrane protein
D TVD_07510 phosphoribosyl transferase K07100 K07100; putative phosphoribosyl transferase
D TVD_12295 exlusion protein FxsA K07113 fxsA; UPF0716 protein FxsA
D TVD_06770 lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D TVD_06865 LemA K03744 lemA; LemA protein
D TVD_07430 SlyX family protein K03745 slyX; SlyX protein
D TVD_01265 hypothetical protein K03747 smg; Smg protein
D TVD_05535 sporulation protein K03749 dedD; DedD protein
D TVD_01760 sporulation protein K03112 damX; DamX protein
D TVD_11490 hypothetical protein K09858 K09858; SEC-C motif domain protein
D TVD_05320 phosphate-starvation-inducible E K13256 psiE; protein PsiE
C 99997 Function unknown
D TVD_07555 hypothetical protein K06867 K06867; uncharacterized protein
D TVD_04170 thioredoxin K06888 K06888; uncharacterized protein
D TVD_05315 hypothetical protein K06888 K06888; uncharacterized protein
D TVD_04840 thymidylate kinase K06888 K06888; uncharacterized protein
D TVD_06990 lysophospholipase K06889 K06889; uncharacterized protein
D TVD_00400 hydrolase K06889 K06889; uncharacterized protein
D TVD_02995 hypothetical protein K06950 K06950; uncharacterized protein
D TVD_09915 NADH-ubiquinone oxidoreductase subunit 6 K06954 K06954; uncharacterized protein
D TVD_05400 peptidase K06973 K06973; uncharacterized protein
D TVD_08720 succinylglutamate desuccinylase K06987 K06987; uncharacterized protein
D TVD_03475 cupin K06995 K06995; uncharacterized protein
D TVD_00270 RND transporter K07003 K07003; uncharacterized protein
D TVD_06935 endonuclease K07004 K07004; uncharacterized protein
D TVD_05660 aminoglycoside phosphotransferase K07028 K07028; uncharacterized protein
D TVD_08585 twitching motility protein PilT K07064 K07064; uncharacterized protein
D TVD_05895 nucleotidyltransferase K07075 K07075; uncharacterized protein
D TVD_10745 DNA polymerase K07075 K07075; uncharacterized protein
D TVD_01490 DNA polymerase subunit beta K07075 K07075; uncharacterized protein
D TVD_04290 permease K07086 K07086; uncharacterized protein
D TVD_03125 permease K07089 K07089; uncharacterized protein
D TVD_01120 permease K07090 K07090; uncharacterized protein
D TVD_09750 membrane protein K07090 K07090; uncharacterized protein
D TVD_11985 hypothetical protein K07090 K07090; uncharacterized protein
D TVD_10615 sulfur reduction protein DsrE K07092 K07092; uncharacterized protein
D TVD_03060 peroxiredoxin K07092 K07092; uncharacterized protein
D TVD_10035 50S ribosomal protein L33 K07092 K07092; uncharacterized protein
D TVD_06660 50S ribosomal protein L33 K07092 K07092; uncharacterized protein
D TVD_08745 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D TVD_10365 membrane protein K07112 K07112; uncharacterized protein
D TVD_02125 LppC family lipoprotein K07121 K07121; uncharacterized protein
D TVD_10475 Sel1 domain-containing protein repeat-containing protein K07126 K07126; uncharacterized protein
D TVD_11690 Sel1 domain-containing protein repeat-containing protein K07126 K07126; uncharacterized protein
D TVD_03935 hypothetical protein K07126 K07126; uncharacterized protein
D TVD_12000 peptidase S16 K07157 K07157; uncharacterized protein
D TVD_13510 membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D TVD_03015 hypothetical protein K08999 K08999; uncharacterized protein
D TVD_10175 hypothetical protein K09004 K09004; uncharacterized protein
D TVD_09600 hypothetical protein K09004 K09004; uncharacterized protein
D TVD_09605 hypothetical protein K09004 K09004; uncharacterized protein
D TVD_08700 hypothetical protein K09004 K09004; uncharacterized protein
D TVD_13375 hypothetical protein K09004 K09004; uncharacterized protein
D TVD_13155 hypothetical protein K09004 K09004; uncharacterized protein
D TVD_12405 hypothetical protein K09004 K09004; uncharacterized protein
D TVD_12375 hypothetical protein K09005 K09005; uncharacterized protein
D TVD_01780 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein
D TVD_06975 hypothetical protein K09131 K09131; uncharacterized protein
D TVD_08825 hypothetical protein K09141 K09141; uncharacterized protein
D TVD_11030 hypothetical protein K09158 K09158; uncharacterized protein
D TVD_11665 hypothetical protein K09160 K09160; uncharacterized protein
D TVD_03265 hypothetical protein K09190 K09190; uncharacterized protein
D TVD_11815 ferritin K09700 K09700; uncharacterized protein
D TVD_09920 hypothetical protein K09701 K09701; uncharacterized protein
D TVD_05000 hypothetical protein K09768 K09768; uncharacterized protein
D TVD_09665 hypothetical protein K09780 K09780; uncharacterized protein
D TVD_04380 tetraacyldisaccharide 4'-kinase K09791 K09791; uncharacterized protein
D TVD_00820 membrane protein K09792 K09792; uncharacterized protein
D TVD_11395 hypothetical protein K09801 K09801; uncharacterized protein
D TVD_09110 hypothetical protein K09803 K09803; uncharacterized protein
D TVD_08470 phage protein K09803 K09803; uncharacterized protein
D TVD_09980 hypothetical protein K09895 K09895; uncharacterized protein
D TVD_01395 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D TVD_11585 hypothetical protein K09908 K09908; uncharacterized protein
D TVD_04645 hypothetical protein K09912 K09912; uncharacterized protein
D TVD_09155 hypothetical protein K09919 K09919; uncharacterized protein
D TVD_04980 hypothetical protein K09920 K09920; uncharacterized protein
D TVD_13650 phytochrome sensor protein K09921 K09921; uncharacterized protein
D TVD_06465 hypothetical protein K09928 K09928; uncharacterized protein
D TVD_07780 hypothetical protein K09928 K09928; uncharacterized protein
D TVD_08005 hypothetical protein K09929 K09929; uncharacterized protein
D TVD_08010 hypothetical protein K09930 K09930; uncharacterized protein
D TVD_10140 hypothetical protein K09938 K09938; uncharacterized protein
D TVD_12170 deoxycytidine triphosphate deaminase K09948 K09948; uncharacterized protein
D TVD_08795 hypothetical protein K09966 K09966; uncharacterized protein
D TVD_03270 urea carboxylase-associated protein K09967 K09967; uncharacterized protein
D TVD_08290 hypothetical protein K07502 yprB; uncharacterized protein
D TVD_13400 phosphate transport regulator K07220 K07220; uncharacterized protein
D TVD_12200 hypothetical protein K07276 K07276; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 13, 2024