+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Vigna angularis (adzuki bean)</h2>
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A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        108340838 mRNA cap guanine-N7 methyltransferase 1	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        108329938 mRNA cap guanine-N7 methyltransferase 2	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        108322542 mRNA-capping enzyme	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        108323406 cyclin-dependent kinase D-3-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        108346090 cyclin-dependent kinase D-3-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
D      Cap binding complex
E        108329148 nuclear cap-binding protein subunit 1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        108332430 nuclear cap-binding protein subunit 2	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        108331013 pre-mRNA cleavage factor Im 25 kDa subunit 1	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        108341818 pre-mRNA cleavage factor Im 25 kDa subunit 2	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        108342886 uncharacterized PE-PGRS family protein PE_PGRS3-like	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
E        108343034 uncharacterized PE-PGRS family protein PE_PGRS46-like	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        108326051 protein CLP1 homolog	K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] 
E        108324773 polyadenylation and cleavage factor homolog 4-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        108325913 polyadenylation and cleavage factor homolog 4-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        108326081 polyadenylation and cleavage factor homolog 4-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        108329252 polyadenylation and cleavage factor homolog 4-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        108345679 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        108343689 cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        108343387 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        108338108 uncharacterized LOC108338108	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        108342979 30-kDa cleavage and polyadenylation specificity factor 30	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        108340564 flowering time control protein FY	K15542 PFS2; polyadenylation factor subunit 2 
E        108323786 WD repeat-containing protein 82-B	K14962 WDR82; COMPASS component SWD2 
E        108329346 WD repeat-containing protein 82	K14962 WDR82; COMPASS component SWD2 
E        108325036 serine/threonine-protein phosphatase alpha-3 isoform-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108323111 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108342833 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108343186 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108347550 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108335451 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108345773 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108338046 serine/threonine-protein phosphatase PP1 isozyme 4	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108344871 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        108329929 cleavage stimulation factor subunit 50	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        108326362 cleavage stimulating factor 64	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        108345669 cleavage stimulation factor subunit 77	K14408 CSTF3; cleavage stimulation factor subunit 3 
E        108330478 symplekin	K06100 SYMPK; symplekin 
E        108347365 symplekin	K06100 SYMPK; symplekin 
D      U7-dependent histone pre-mRNA processing factors
E        108338377 small nuclear ribonucleoprotein-associated protein B-like	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        108330500 small nuclear ribonucleoprotein-associated protein B'-like	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        108335401 small nuclear ribonucleoprotein SmD3b-like	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        108340453 small nuclear ribonucleoprotein SmD3b-like	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        108322149 small nuclear ribonucleoprotein E-like	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        108327122 small nuclear ribonucleoprotein E-like	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        108330794 probable small nuclear ribonucleoprotein F	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        108322113 probable small nuclear ribonucleoprotein F	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        108328059 probable small nuclear ribonucleoprotein G	K11099 SNRPG; small nuclear ribonucleoprotein G 
E        108343689 cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        108343387 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        108326362 cleavage stimulating factor 64	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        108330478 symplekin	K06100 SYMPK; symplekin 
E        108347365 symplekin	K06100 SYMPK; symplekin 
D      DRB sensitivity inducing factor (DSIF) complex
E        108335320 transcription elongation factor SPT4 homolog 2	K15171 SUPT4H1; transcription elongation factor SPT4 
E        108331724 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
D      N6-methyltransferase complex
E        108321597 N6-adenosine-methyltransferase MT-A70-like	K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] 
E        108325982 methyltransferase-like protein 1	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        108319107 ribosomal RNA large subunit methyltransferase F	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        108329850 FKBP12-interacting protein of 37 kDa	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        108338115 zinc finger CCCH domain-containing protein 38-like	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        108331628 filaggrin	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        108339337 zinc finger CCCH domain-containing protein 38	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        108329007 E3 ubiquitin-protein ligase Hakai	K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] 
D      Poly(A) addition factors
E        108331406 nuclear poly(A) polymerase 4-like	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        108342364 nuclear poly(A) polymerase 3	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        108320639 nuclear poly(A) polymerase 4-like	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        108323380 nuclear poly(A) polymerase 1-like	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        108345798 nuclear poly(A) polymerase 1-like	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
D      Negative regulators of mRNA 3' end processing
E        108340973 protein BREAST CANCER SUSCEPTIBILITY 1 homolog	K10683 BARD1; BRCA1-associated RING domain protein 1 
E        108323219 BRCA1-associated RING domain protein 1	K10683 BARD1; BRCA1-associated RING domain protein 1 
E        108345760 zinc finger CCCH domain-containing protein 41	K13192 RBM26; RNA-binding protein 26 
E        108342171 uncharacterized LOC108342171	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        108326927 uncharacterized LOC108326927	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        108338633 uncharacterized LOC108338633	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        108326595 uncharacterized LOC108326595	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
C    Other processing factors
D      108338474 DNA/RNA-binding protein KIN17-like	K13102 KIN; DNA/RNA-binding protein KIN17 
D      108334485 methyltransferase-like protein 22	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      108334186 serrate RNA effector molecule-like	K27103 SRRT; serrate RNA effector molecule 
D      108340644 serrate RNA effector molecule-like	K27103 SRRT; serrate RNA effector molecule 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        108320789 RNA-binding protein 8A	K12876 RBM8A; RNA-binding protein 8A 
E        108346240 protein mago nashi homolog	K12877 MAGOH; protein mago nashi 
E        108342633 protein mago nashi homolog	K12877 MAGOH; protein mago nashi 
E        108337367 THO complex subunit 4B-like	K12881 THOC4; THO complex subunit 4 
E        108329180 THO complex subunit 4D	K12881 THOC4; THO complex subunit 4 
E        108334220 THO complex subunit 4A-like	K12881 THOC4; THO complex subunit 4 
E        108319573 THO complex subunit 4A-like	K12881 THOC4; THO complex subunit 4 
E        108319616 THO complex subunit 4B	K12881 THOC4; THO complex subunit 4 
E        108331657 DEAD-box ATP-dependent RNA helicase 56	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        108321005 DEAD-box ATP-dependent RNA helicase 56-like	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        108320679 DEAD-box ATP-dependent RNA helicase 56-like	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        108321142 eukaryotic initiation factor 4A-3	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        108337241 histone deacetylase complex subunit SAP18	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        108323724 pinin	K13114 PNN; pinin 
E        108329179 apoptotic chromatin condensation inducer in the nucleus	K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus 
E        108334435 serine/arginine-rich splicing factor SR45	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        108319624 serine/arginine repetitive matrix protein 1	K13171 SRRM1; serine/arginine repetitive matrix protein 1 
D      TREX complex
E        108333895 THO complex subunit 1	K12878 THOC1; THO complex subunit 1 
E        108323404 THO complex subunit 2	K12879 THOC2; THO complex subunit 2 
E        108343293 THO complex subunit 3	K12880 THOC3; THO complex subunit 3 
E        108337367 THO complex subunit 4B-like	K12881 THOC4; THO complex subunit 4 
E        108329180 THO complex subunit 4D	K12881 THOC4; THO complex subunit 4 
E        108334220 THO complex subunit 4A-like	K12881 THOC4; THO complex subunit 4 
E        108319573 THO complex subunit 4A-like	K12881 THOC4; THO complex subunit 4 
E        108319616 THO complex subunit 4B	K12881 THOC4; THO complex subunit 4 
E        108336320 THO complex subunit 5B	K13174 THOC5; THO complex subunit 5 
E        108343218 THO complex subunit 5A	K13174 THOC5; THO complex subunit 5 
E        108338011 THO complex subunit 6	K13175 THOC6; THO complex subunit 6 
E        108341883 THO complex subunit 7A-like	K13176 THOC7; THO complex subunit 7 
D      TREX-2 complex
E        108322681 enhanced ethylene response protein 5	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        108337203 protein DSS1 HOMOLOG ON CHROMOSOME V-like	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        108330755 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        108326939 transcription and mRNA export factor SUS1	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        108340434 SAC3 family protein C	K23719 SAC3; nuclear mRNA export protein SAC3 
E        108342793 SAC3 family protein B	K23719 SAC3; nuclear mRNA export protein SAC3 
D      Nuclear pore complex
E        108333909 nuclear-pore anchor	K09291 TPR; nucleoprotein TPR 
E        108336098 protein RAE1	K14298 RAE1; mRNA export factor 
E        108323437 protein RAE1-like	K14298 RAE1; mRNA export factor 
E        108325054 protein transport protein SEC13 homolog B-like	K14004 SEC13; protein transport protein SEC13 
E        108324886 protein transport protein SEC13 homolog B	K14004 SEC13; protein transport protein SEC13 
E        108346842 protein transport protein SEC13 homolog B-like	K14004 SEC13; protein transport protein SEC13 
E        108338635 nuclear pore complex protein NUP85	K14304 NUP85; nuclear pore complex protein Nup85 
E        108335030 nuclear pore complex protein NUP43	K14305 NUP43; nuclear pore complex protein Nup43 
E        108336063 uncharacterized LOC108336063	K14295 NUP50; nuclear pore complex protein Nup50 
E        108318955 nuclear pore complex protein NUP54	K14308 NUP54; nuclear pore complex protein Nup54 
E        108329442 nuclear pore complex protein NUP62	K14306 NUP62; nuclear pore complex protein Nup62 
E        108329537 nuclear pore complex protein NUP88	K14318 NUP88; nuclear pore complex protein Nup88 
E        108334213 nuclear pore complex protein NUP93A-like	K14309 NUP93; nuclear pore complex protein Nup93 
E        108333932 nuclear pore complex protein NUP98A	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        108337947 nuclear pore complex protein NUP96	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        108347499 nuclear pore complex protein NUP107	K14301 NUP107; nuclear pore complex protein Nup107 
E        108338128 nuclear pore complex protein NUP133	K14300 NUP133; nuclear pore complex protein Nup133 
E        108340198 uncharacterized LOC108340198	K14311 NUP188; nuclear pore complex protein Nup188 
E        108320128 nuclear pore complex protein NUP155	K14312 NUP155; nuclear pore complex protein Nup155 
E        108325929 nuclear pore complex protein NUP160	K14303 NUP160; nuclear pore complex protein Nup160 
E        108332330 nuclear pore complex protein NUP35	K14313 NUP35; nuclear pore complex protein Nup53 
E        108331562 nuclear pore complex protein NUP205	K14310 NUP205; nuclear pore complex protein Nup205 
E        108345528 nuclear pore complex protein GP210	K14314 NUP210; nuclear pore complex protein Nup210 
E        108325961 nuclear pore complex protein NUP214	K14317 NUP214; nuclear pore complex protein Nup214 
E        108336121 nuclear pore complex protein NUP58	K14307 NUPL1; nucleoporin p58/p45 
E        108338994 zinc finger CCCH domain-containing protein 46	K14321 NUPL2; nucleoporin-like protein 2 
E        108341657 uncharacterized LOC108341657	K14315 NDC1; nucleoporin NDC1 
E        108320333 protein SEH1	K14299 SEH1; nucleoporin SEH1 
E        108346348 aladin-like	K14320 AAAS; aladin 
E        108329337 aladin	K14320 AAAS; aladin 
E        108329765 protein GLE1	K18723 GLE1; nucleoporin GLE1 
D      Ran-mediated transport factors
E        108330816 GTP-binding nuclear protein Ran-3-like	K07936 RAN; GTP-binding nuclear protein Ran 
E        108331506 GTP-binding nuclear protein Ran-3-like	K07936 RAN; GTP-binding nuclear protein Ran 
E        108338090 GTP-binding nuclear protein Ran-3-like	K07936 RAN; GTP-binding nuclear protein Ran 
E        108331507 GTP-binding nuclear protein Ran-3	K07936 RAN; GTP-binding nuclear protein Ran 
E        108338001 plant UBX domain-containing protein 10-like	K18726 FAF2; FAS-associated factor 2 
E        108347753 plant UBX domain-containing protein 9-like	K18726 FAF2; FAS-associated factor 2 
E        108322814 plant UBX domain-containing protein 10	K18726 FAF2; FAS-associated factor 2 
E        108326080 cell division cycle protein 48 homolog	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        108331945 cell division cycle protein 48 homolog	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        108322007 cell division cycle protein 48 homolog	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        108326115 cell division cycle protein 48 homolog	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        108333247 protein N-lysine methyltransferase METTL21A	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        108339752 protein N-lysine methyltransferase METTL21A	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        108320809 protein EXPORTIN 1A-like	K14290 XPO1; exportin-1 
E        108340452 protein EXPORTIN 1A	K14290 XPO1; exportin-1 
E        108331558 exportin-7-B	K18460 XPO7; exportin-7 
E        108326012 exportin-7-like	K18460 XPO7; exportin-7 
E        108326618 RAN GTPase-activating protein 1	K14319 RANGAP1; Ran GTPase-activating protein 1 
E        108324157 RAN GTPase-activating protein 2	K14319 RANGAP1; Ran GTPase-activating protein 1 
D      eIF4F and regulatory proteins
E        108341759 eukaryotic translation initiation factor 4E-1	K03259 EIF4E; translation initiation factor 4E 
E        108326591 eukaryotic translation initiation factor	K03259 EIF4E; translation initiation factor 4E 
E        108343803 eukaryotic translation initiation factor NCBP	K03259 EIF4E; translation initiation factor 4E 
E        108335164 ATP-dependent RNA helicase eIF4A	K03257 EIF4A; translation initiation factor 4A 
E        108331837 eukaryotic initiation factor 4A-10-like	K03257 EIF4A; translation initiation factor 4A 
E        108331866 eukaryotic initiation factor 4A-15-like	K03257 EIF4A; translation initiation factor 4A 
E        108338010 eukaryotic initiation factor 4A-2-like	K03257 EIF4A; translation initiation factor 4A 
E        108323183 eukaryotic initiation factor 4A-10	K03257 EIF4A; translation initiation factor 4A 
E        108334177 eukaryotic initiation factor 4A-10-like	K03257 EIF4A; translation initiation factor 4A 
E        108345888 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        108347600 eukaryotic translation initiation factor 4G-like	K03260 EIF4G; translation initiation factor 4G 
E        108331795 eukaryotic translation initiation factor-like	K03260 EIF4G; translation initiation factor 4G 
E        108328913 eukaryotic translation initiation factor 4G-like	K03260 EIF4G; translation initiation factor 4G 
E        108345594 protein PIR	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        108320763 DEAD-box ATP-dependent RNA helicase 37-like	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        108344502 DEAD-box ATP-dependent RNA helicase 37-like	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        108318730 DEAD-box ATP-dependent RNA helicase 37-like	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        108324234 DEAD-box ATP-dependent RNA helicase 37-like	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        108336952 DEAD-box ATP-dependent RNA helicase 52B-like	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        108327492 uncharacterized LOC108327492	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        108344792 polyadenylate-binding protein 3-like	K13126 PABPC; polyadenylate-binding protein 
E        108324330 polyadenylate-binding protein 7-like	K13126 PABPC; polyadenylate-binding protein 
E        108326692 polyadenylate-binding protein 3-like	K13126 PABPC; polyadenylate-binding protein 
E        108333160 30S ribosomal protein 2, chloroplastic	K13126 PABPC; polyadenylate-binding protein 
E        108341274 polyadenylate-binding protein 2-like	K13126 PABPC; polyadenylate-binding protein 
E        108342951 polyadenylate-binding protein 2-like	K13126 PABPC; polyadenylate-binding protein 
E        108342969 DExH-box ATP-dependent RNA helicase DExH11	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        108322829 malignant T-cell-amplified sequence 1 homolog	K07575 MCTS; malignant T-cell-amplified sequence 
E        108329978 translation machinery-associated protein 22	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
D      Other transport factors
E        108321880 partner of Y14 and mago	K14294 WIBG; partner of Y14 and mago 
E        108327034 UBP1-associated protein 2C-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108321741 glycine-rich RNA-binding protein 3, mitochondrial	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108323048 glycine-rich RNA-binding protein blt801-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108329562 glycine-rich RNA-binding protein 3, mitochondrial	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108334467 heterogeneous nuclear ribonucleoprotein 1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108338158 UBP1-associated protein 2B-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108340314 UBP1-associated protein 2C	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108345765 UBP1-associated protein 2A-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108329106 UBP1-associated protein 2A-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108343235 heterogeneous nuclear ribonucleoprotein A3	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108334650 RNA-binding protein Musashi homolog 2	K14411 MSI; RNA-binding protein Musashi 
E        108338352 heterogeneous nuclear ribonucleoprotein 1	K14411 MSI; RNA-binding protein Musashi 
E        108322856 heterogeneous nuclear ribonucleoprotein 1-like	K14411 MSI; RNA-binding protein Musashi 
E        108330828 RNA-binding protein 1-like	K14411 MSI; RNA-binding protein Musashi 
E        108321539 heterogeneous nuclear ribonucleoprotein 1-like	K14411 MSI; RNA-binding protein Musashi 
E        108343057 heterogeneous nuclear ribonucleoprotein 1	K14411 MSI; RNA-binding protein Musashi 
E        108345637 HBS1-like protein	K14416 HBS1; elongation factor 1 alpha-like protein 
E        108322425 protein PELOTA 1-like	K06965 PELO; protein pelota 
E        108323126 protein PELOTA 1	K06965 PELO; protein pelota 
E        108321384 polyadenylate-binding protein 2	K14396 PABPN1; polyadenylate-binding protein 2 
E        108343999 polyadenylate-binding protein 2-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108343178 polyadenylate-binding protein 1	K14396 PABPN1; polyadenylate-binding protein 2 
E        108343310 polyadenylate-binding protein 2-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108326214 DEAD-box ATP-dependent RNA helicase 38	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        108344527 DEAD-box ATP-dependent RNA helicase 38-like	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        108343033 pre-mRNA-splicing factor SYF1	K12867 SYF1; pre-mRNA-splicing factor SYF1 
E        108329666 protein MODIFIER OF SNC1 11	K18732 SARNP; SAP domain-containing ribonucleoprotein 
E        108319541 transcription factor Pur-alpha 1	K21772 PURA; transcriptional activator protein Pur-alpha 
E        108325932 SAC3 family protein A	K23802 LENG8; SAC3 family protein LENG8/THP3 
C    Surveillance factors
D      Surveillance complex
E        108345824 eukaryotic peptide chain release factor subunit 1-3	K03265 ETF1; peptide chain release factor subunit 1 
E        108329580 eukaryotic peptide chain release factor subunit 1-3-like	K03265 ETF1; peptide chain release factor subunit 1 
E        108345790 eukaryotic peptide chain release factor subunit 1-3-like	K03265 ETF1; peptide chain release factor subunit 1 
E        108333063 eukaryotic peptide chain release factor GTP-binding subunit ERF3A	K03267 ERF3; peptide chain release factor subunit 3 
E        108322636 regulator of nonsense transcripts UPF2	K14327 UPF2; regulator of nonsense transcripts 2 
E        108334225 regulator of nonsense transcripts UPF3-like	K14328 UPF3; regulator of nonsense transcripts 3 
E        108342097 regulator of nonsense transcripts UPF3-like	K14328 UPF3; regulator of nonsense transcripts 3 
D      Protein phosphatase 2A
E        108326136 serine/threonine-protein phosphatase PP2A-3 catalytic subunit-like	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        108322509 serine/threonine-protein phosphatase PP2A catalytic subunit	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        108319749 serine/threonine-protein phosphatase PP2A catalytic subunit	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        108328947 serine/threonine-protein phosphatase PP2A catalytic subunit	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        108321452 serine/threonine-protein phosphatase PP2A-2 catalytic subunit-like	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        108335731 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        108344617 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        108325942 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        108331674 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        108320629 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        108334042 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        108326186 serine/threonine protein phosphatase 2A regulatory subunit B''beta-like	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        108345671 probable serine/threonine protein phosphatase 2A regulatory subunit B''delta	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        108323127 probable serine/threonine protein phosphatase 2A regulatory subunit B''delta	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        108325632 probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        108338252 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        108322447 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        108332153 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform-like	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        108319303 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform-like	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        108329334 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        108345666 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        108325629 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        108326106 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        108320256 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform-like	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        108331923 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform-like	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        108325213 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        108340177 serine/threonine-protein kinase SMG1-like	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        108338180 protein SMG7-like	K14409 SMG7; protein SMG7 
E        108319797 protein SMG7	K14409 SMG7; protein SMG7 
E        108334029 uncharacterized LOC108334029	K18734 SMG8; protein SMG8 
E        108320842 protein SMG9-like	K18735 SMG9; protein SMG9 
E        108327492 uncharacterized LOC108327492	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
C    Factors involved in mRNA localization
D      Cargo complex
E        108319172 pumilio homolog 24	K14844 PUF6; pumilio homology domain family member 6 
E        108331508 myosin-15	K10357 MYO5; myosin V 
E        108334020 myosin-12	K10357 MYO5; myosin V 
E        108338015 myosin-17	K10357 MYO5; myosin V 
E        108337462 myosin-15-like	K10357 MYO5; myosin V 
E        108323108 myosin-11-like	K10357 MYO5; myosin V 
E        108345678 myosin-11-like	K10357 MYO5; myosin V 
E        108325920 myosin-6-like	K10357 MYO5; myosin V 
E        108333948 myosin-2	K10357 MYO5; myosin V 
E        108324636 myosin-9-like	K10357 MYO5; myosin V 
E        108340213 myosin-2-like	K10357 MYO5; myosin V 
E        108334982 myosin-6-like	K10357 MYO5; myosin V 
E        108334983 myosin-8-like	K10357 MYO5; myosin V 
E        108322998 myosin-6-like	K10357 MYO5; myosin V 
E        108336299 piRNA biogenesis protein EXD1	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
D      Factors that have mRNA localization signals
D      Trans-acting binding proteins
E        108331300 far upstream element-binding protein 1-like	K13210 FUBP; far upstream element-binding protein 
E        108331301 far upstream element-binding protein 2-like	K13210 FUBP; far upstream element-binding protein 
E        108320876 far upstream element-binding protein 1-like	K13210 FUBP; far upstream element-binding protein 
E        108345670 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        108325895 elongation factor 1-alpha-like	K03231 EEF1A; elongation factor 1-alpha 
E        108345585 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        108341756 elongation factor 1-gamma	K03233 EEF1G; elongation factor 1-gamma 
E        108319737 elongation factor 1-gamma-like	K03233 EEF1G; elongation factor 1-gamma 
E        108345893 probable ADP-ribosylation factor GTPase-activating protein AGD14	K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 
D      Other mRNA localization factors
E        108345594 protein PIR	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        108346001 flowering locus K homology domain	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108329788 RNA-binding KH domain-containing protein PEPPER-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108344714 KH domain-containing protein HEN4	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108320080 KH domain-containing protein HEN4	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108322192 RNA-binding KH domain-containing protein PEPPER-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108326349 flowering locus K homology domain-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108329113 KH domain-containing protein At4g18375-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108329870 RNA-binding KH domain-containing protein PEPPER	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108331993 KH domain-containing protein HEN4-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108331996 KH domain-containing protein HEN4-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108332027 KH domain-containing protein HEN4	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108338143 KH domain-containing protein HEN4	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108345598 KH domain-containing protein HEN4-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108347890 KH domain-containing protein At4g18375	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108347984 flowering locus K homology domain-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        108326246 protein argonaute 10-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108338365 protein argonaute 4-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108338899 protein argonaute 6	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108327641 protein argonaute 2-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108335896 protein argonaute 7-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108340594 protein argonaute MEL1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108345712 protein argonaute 1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108341601 protein argonaute 2	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108323858 protein argonaute PNH1-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108329944 protein argonaute PNH1-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108336112 protein argonaute 7-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108345818 protein argonaute 4-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108326341 protein argonaute 10-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108341759 eukaryotic translation initiation factor 4E-1	K03259 EIF4E; translation initiation factor 4E 
E        108326591 eukaryotic translation initiation factor	K03259 EIF4E; translation initiation factor 4E 
E        108343803 eukaryotic translation initiation factor NCBP	K03259 EIF4E; translation initiation factor 4E 
E        108320763 DEAD-box ATP-dependent RNA helicase 37-like	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        108344502 DEAD-box ATP-dependent RNA helicase 37-like	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        108318730 DEAD-box ATP-dependent RNA helicase 37-like	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        108324234 DEAD-box ATP-dependent RNA helicase 37-like	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        108336952 DEAD-box ATP-dependent RNA helicase 52B-like	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        108329381 DEAD-box ATP-dependent RNA helicase 8-like	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        108335871 protein decapping 5-like	K18749 LSM14; protein LSM14 
E        108335946 protein decapping 5-like	K18749 LSM14; protein LSM14 
E        108336001 decapping 5-like protein	K18749 LSM14; protein LSM14 
E        108320898 probable RNA helicase SDE3	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        108325916 transportin-1	K18752 TNPO1; transportin-1 
E        108340177 serine/threonine-protein kinase SMG1-like	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        108338180 protein SMG7-like	K14409 SMG7; protein SMG7 
E        108319797 protein SMG7	K14409 SMG7; protein SMG7 
E        108324796 zinc finger CCCH domain-containing protein 15	K18753 ZFP36L; butyrate response factor 
E        108327034 UBP1-associated protein 2C-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108321741 glycine-rich RNA-binding protein 3, mitochondrial	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108323048 glycine-rich RNA-binding protein blt801-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108329562 glycine-rich RNA-binding protein 3, mitochondrial	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108334467 heterogeneous nuclear ribonucleoprotein 1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108338158 UBP1-associated protein 2B-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108340314 UBP1-associated protein 2C	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108345765 UBP1-associated protein 2A-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108329106 UBP1-associated protein 2A-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108343235 heterogeneous nuclear ribonucleoprotein A3	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108338251 la-related protein 1A	K18757 LARP1; la-related protein 1 
E        108321296 la-related protein 1C-like	K18757 LARP1; la-related protein 1 
E        108336207 la-related protein 1C-like	K18757 LARP1; la-related protein 1 
E        108322129 la-related protein 1C-like	K18757 LARP1; la-related protein 1 
E        108343280 la-related protein 1C-like	K18757 LARP1; la-related protein 1 
E        108336276 la-related protein 1B-like	K18757 LARP1; la-related protein 1 
D      P-body specific factors
E        108321497 mRNA-decapping enzyme subunit 2	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        108334314 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        108326904 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        108347576 sm-like protein LSM1B	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        108347577 sm-like protein LSM1B	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        108329067 sm-like protein LSM2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        108344860 sm-like protein LSM3A	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        108325253 sm-like protein LSM4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        108319385 sm-like protein LSM5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        108327765 sm-like protein LSM6A	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        108339764 sm-like protein LSM7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        108336407 sm-like protein LSM8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        108331508 myosin-15	K10357 MYO5; myosin V 
E        108334020 myosin-12	K10357 MYO5; myosin V 
E        108338015 myosin-17	K10357 MYO5; myosin V 
E        108337462 myosin-15-like	K10357 MYO5; myosin V 
E        108323108 myosin-11-like	K10357 MYO5; myosin V 
E        108345678 myosin-11-like	K10357 MYO5; myosin V 
E        108325920 myosin-6-like	K10357 MYO5; myosin V 
E        108333948 myosin-2	K10357 MYO5; myosin V 
E        108324636 myosin-9-like	K10357 MYO5; myosin V 
E        108340213 myosin-2-like	K10357 MYO5; myosin V 
E        108334982 myosin-6-like	K10357 MYO5; myosin V 
E        108334983 myosin-8-like	K10357 MYO5; myosin V 
E        108322998 myosin-6-like	K10357 MYO5; myosin V 
E        108326168 tubulin alpha-4 chain	K07374 TUBA; tubulin alpha 
E        108323190 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        108331822 tubulin alpha chain	K07374 TUBA; tubulin alpha 
E        108331832 tubulin alpha chain	K07374 TUBA; tubulin alpha 
E        108329309 tubulin alpha-3 chain-like	K07374 TUBA; tubulin alpha 
E        108336077 tubulin alpha-4 chain-like	K07374 TUBA; tubulin alpha 
E        108347605 tubulin alpha-3 chain	K07374 TUBA; tubulin alpha 
E        108344305 tubulin alpha-3 chain-like	K07374 TUBA; tubulin alpha 
E        108347373 CCR4-NOT transcription complex subunit 1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        108333826 probable NOT transcription complex subunit VIP2	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        108340516 probable NOT transcription complex subunit VIP2	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        108329192 general negative regulator of transcription subunit 3	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        108345481 CCR4-NOT transcription complex subunit 3-like	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        108345526 general negative regulator of transcription subunit 3-like	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        108333933 uncharacterized LOC108333933	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        108340287 uncharacterized LOC108340287	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        108334692 carbon catabolite repressor protein 4 homolog 4	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        108318707 carbon catabolite repressor protein 4 homolog 1-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        108329392 carbon catabolite repressor protein 4 homolog 1-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        108329776 probable CCR4-associated factor 1 homolog 9	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108322843 probable CCR4-associated factor 1 homolog 11	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108327208 probable CCR4-associated factor 1 homolog 9	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108329869 probable CCR4-associated factor 1 homolog 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108320412 probable CCR4-associated factor 1 homolog 6	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108333296 probable CCR4-associated factor 1 homolog 11	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108327164 probable CCR4-associated factor 1 homolog 11	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108338889 probable CCR4-associated factor 1 homolog 11	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108338234 DIS3-like exonuclease 2	K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] 
E        108319561 uncharacterized LOC108319561	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        108334031 protein PAT1 homolog 1	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        108334074 uncharacterized LOC108334074	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        108342691 enhancer of mRNA-decapping protein 4-like	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        108320978 enhancer of mRNA-decapping protein 4-like	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        108322636 regulator of nonsense transcripts UPF2	K14327 UPF2; regulator of nonsense transcripts 2 
E        108334225 regulator of nonsense transcripts UPF3-like	K14328 UPF3; regulator of nonsense transcripts 3 
E        108342097 regulator of nonsense transcripts UPF3-like	K14328 UPF3; regulator of nonsense transcripts 3 
E        108337580 DNA-directed RNA polymerase II subunit RPB7-like	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        108319348 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        108318923 uncharacterized LOC108318923	K20102 YTHDF; YTH domain-containing family protein 
E        108329574 uncharacterized LOC108329574	K20102 YTHDF; YTH domain-containing family protein 
E        108319733 uncharacterized LOC108319733	K20102 YTHDF; YTH domain-containing family protein 
E        108331534 uncharacterized LOC108331534	K20102 YTHDF; YTH domain-containing family protein 
E        108334170 uncharacterized LOC108334170	K20102 YTHDF; YTH domain-containing family protein 
E        108320613 uncharacterized LOC108320613	K20102 YTHDF; YTH domain-containing family protein 
E        108343326 YTH domain-containing family protein 1	K20102 YTHDF; YTH domain-containing family protein 
D      Stress granule specific factors
E        108347591 oligouridylate-binding protein 1B-like	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        108338519 oligouridylate-binding protein 1-like	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        108331833 oligouridylate-binding protein 1-like	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        108344792 polyadenylate-binding protein 3-like	K13126 PABPC; polyadenylate-binding protein 
E        108324330 polyadenylate-binding protein 7-like	K13126 PABPC; polyadenylate-binding protein 
E        108326692 polyadenylate-binding protein 3-like	K13126 PABPC; polyadenylate-binding protein 
E        108333160 30S ribosomal protein 2, chloroplastic	K13126 PABPC; polyadenylate-binding protein 
E        108341274 polyadenylate-binding protein 2-like	K13126 PABPC; polyadenylate-binding protein 
E        108342951 polyadenylate-binding protein 2-like	K13126 PABPC; polyadenylate-binding protein 
E        108321538 ras GTPase-activating protein-binding protein 1	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        108323863 ras GTPase-activating protein-binding protein 2-like	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        108323034 putative G3BP-like protein	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        108326831 putative G3BP-like protein	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        108346869 eukaryotic translation initiation factor 2A	K15026 EIF2A; translation initiation factor 2A 
E        108331887 eukaryotic translation initiation factor 3 subunit B-like	K03253 EIF3B; translation initiation factor 3 subunit B 
E        108331510 eukaryotic translation initiation factor 3 subunit B-like	K03253 EIF3B; translation initiation factor 3 subunit B 
E        108335164 ATP-dependent RNA helicase eIF4A	K03257 EIF4A; translation initiation factor 4A 
E        108331837 eukaryotic initiation factor 4A-10-like	K03257 EIF4A; translation initiation factor 4A 
E        108331866 eukaryotic initiation factor 4A-15-like	K03257 EIF4A; translation initiation factor 4A 
E        108338010 eukaryotic initiation factor 4A-2-like	K03257 EIF4A; translation initiation factor 4A 
E        108323183 eukaryotic initiation factor 4A-10	K03257 EIF4A; translation initiation factor 4A 
E        108334177 eukaryotic initiation factor 4A-10-like	K03257 EIF4A; translation initiation factor 4A 
E        108321142 eukaryotic initiation factor 4A-3	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        108345888 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        108347600 eukaryotic translation initiation factor 4G-like	K03260 EIF4G; translation initiation factor 4G 
E        108331795 eukaryotic translation initiation factor-like	K03260 EIF4G; translation initiation factor 4G 
E        108328913 eukaryotic translation initiation factor 4G-like	K03260 EIF4G; translation initiation factor 4G 
E        108344010 receptor for activated C kinase 1C-like	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        108326353 guanine nucleotide-binding protein subunit beta-like protein	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        108334390 guanine nucleotide-binding protein subunit beta-like protein	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        108325460 guanine nucleotide-binding protein subunit beta-like protein	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        108331882 tudor domain-containing protein 3	K18404 TDRD3; tudor domain-containing protein 3 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        108334314 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        108326904 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        108321497 mRNA-decapping enzyme subunit 2	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        108329381 DEAD-box ATP-dependent RNA helicase 8-like	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        108342691 enhancer of mRNA-decapping protein 4-like	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        108320978 enhancer of mRNA-decapping protein 4-like	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        108319561 uncharacterized LOC108319561	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        108334031 protein PAT1 homolog 1	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        108334074 uncharacterized LOC108334074	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
D      Lsm complex
E        108347576 sm-like protein LSM1B	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        108347577 sm-like protein LSM1B	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        108329067 sm-like protein LSM2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        108344860 sm-like protein LSM3A	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        108325253 sm-like protein LSM4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        108319385 sm-like protein LSM5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        108327765 sm-like protein LSM6A	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        108339764 sm-like protein LSM7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        108336407 sm-like protein LSM8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
E        108338222 5'-3' exoribonuclease 3	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        108345882 5'-3' exoribonuclease 4-like	K20553 XRN4; 5'-3' exoribonuclease 4 [EC:3.1.13.-] 
E        108342985 5'-3' exoribonuclease 4-like	K20553 XRN4; 5'-3' exoribonuclease 4 [EC:3.1.13.-] 
D      Other 5'-3' decay factors
C    3'-5' decay
D      Core exosome factors
E        108323116 exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
E        108328123 exosome complex component RRP4 homolog	K03679 RRP4; exosome complex component RRP4 
E        108335205 putative exosome complex component rrp40	K03681 RRP40; exosome complex component RRP40 
E        108343709 exosome complex component RRP41 homolog	K11600 RRP41; exosome complex component RRP41 
E        108320702 exosome complex exonuclease RRP46 homolog	K12590 RRP46; exosome complex component RRP46 
E        108340667 exosome complex component RRP41-like	K12587 MTR3; exosome complex component MTR3 
E        108337855 exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
E        108320504 exosome complex component RRP43-like	K12586 RRP43; exosome complex component RRP43 
E        108336313 exosome complex component RRP43-like	K12586 RRP43; exosome complex component RRP43 
E        108320827 exosome complex component RRP45A-like	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        108331601 exosome complex exonuclease RRP44 homolog A	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        108345627 protein RRP6-like 2	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        108328967 protein RRP6-like 2	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        108338514 nuclear nucleic acid-binding protein C1D-like	K12592 C1D; exosome complex protein LRP1 
E        108330025 nuclear nucleic acid-binding protein C1D	K12592 C1D; exosome complex protein LRP1 
E        108333249 uncharacterized LOC108333249	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
D      TRAMP complex
E        108334417 non-canonical poly(A) RNA polymerase PAPD5	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        108321699 DExH-box ATP-dependent RNA helicase DExH9	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
E        108322943 DExH-box ATP-dependent RNA helicase DExH10	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
D      Ski complex
E        108342969 DExH-box ATP-dependent RNA helicase DExH11	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        108319950 tetratricopeptide repeat protein SKI3	K12600 SKI3; superkiller protein 3 
E        108336164 WD repeat-containing protein VIP3	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        108334692 carbon catabolite repressor protein 4 homolog 4	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        108318707 carbon catabolite repressor protein 4 homolog 1-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        108329392 carbon catabolite repressor protein 4 homolog 1-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        108347373 CCR4-NOT transcription complex subunit 1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        108333826 probable NOT transcription complex subunit VIP2	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        108340516 probable NOT transcription complex subunit VIP2	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        108329192 general negative regulator of transcription subunit 3	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        108345481 CCR4-NOT transcription complex subunit 3-like	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        108345526 general negative regulator of transcription subunit 3-like	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        108333933 uncharacterized LOC108333933	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        108340287 uncharacterized LOC108340287	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        108329776 probable CCR4-associated factor 1 homolog 9	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108322843 probable CCR4-associated factor 1 homolog 11	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108327208 probable CCR4-associated factor 1 homolog 9	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108329869 probable CCR4-associated factor 1 homolog 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108320412 probable CCR4-associated factor 1 homolog 6	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108333296 probable CCR4-associated factor 1 homolog 11	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108327164 probable CCR4-associated factor 1 homolog 11	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108338889 probable CCR4-associated factor 1 homolog 11	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108322847 cell differentiation protein RCD1 homolog	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        108337489 cell differentiation protein RCD1 homolog	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        108345810 CCR4-NOT transcription complex subunit 10	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
E        108324955 ABC transporter I family member 20	K12608 CAF16; CCR4-NOT complex subunit CAF16 
E        108324214 ABC transporter I family member 19	K12608 CAF16; CCR4-NOT complex subunit CAF16 
D      Pan complex
D      Other 3'-5' decay factors
E        108329600 poly(A)-specific ribonuclease PARN-like	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        108324165 uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        108340987 poly(A)-specific ribonuclease PARN	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        108338210 DExH-box ATP-dependent RNA helicase DExH6-like	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        108340342 DExH-box ATP-dependent RNA helicase DExH3	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        108323408 DExH-box ATP-dependent RNA helicase DExH3	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        108326006 DExH-box ATP-dependent RNA helicase DExH1	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        108335756 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        108326104 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        108342813 DExH-box ATP-dependent RNA helicase DExH6	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        108326371 3'-5' exoribonuclease 1-like	K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] 
E        108345693 protein NRDE2 homolog	K26109 NRDE2; nuclear exosome regulator NRDE2 
E        108345597 protein RST1	K27498 FOCAD; focadhesin 
C    Other degradation factors
D      RNases
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        108337314 oligoribonuclease	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
E        108343536 probable ATP-dependent DNA helicase RecQ	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] 
D      Other RNA degradosome components
E        108322462 enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        108344704 enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        108330644 enolase 1, chloroplastic	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        108338462 cytosolic enolase 3	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        108329236 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        108345944 polyribonucleotide nucleotidyltransferase 2, mitochondrial	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        108333453 ATP-dependent 6-phosphofructokinase 3-like	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        108331776 ATP-dependent 6-phosphofructokinase 6	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        108347733 ATP-dependent 6-phosphofructokinase 7-like	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        108328697 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        108345953 ATP-dependent 6-phosphofructokinase 3	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        108338982 ATP-dependent 6-phosphofructokinase 2	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        108338685 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        108343555 ATP-dependent 6-phosphofructokinase 4, chloroplastic-like	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        108319417 heat shock 70 kDa protein, mitochondrial	K04043 dnaK; molecular chaperone DnaK 
E        108343167 heat shock 70 kDa protein, mitochondrial	K04043 dnaK; molecular chaperone DnaK 
E        108326154 chaperonin CPN60-2, mitochondrial	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        108341854 ruBisCO large subunit-binding protein subunit beta, chloroplastic	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        108343342 chaperonin CPN60-2, mitochondrial	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        108334240 ruBisCO large subunit-binding protein subunit beta, chloroplastic	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        108323324 chaperonin CPN60-like 2, mitochondrial	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        108328123 exosome complex component RRP4 homolog	K03679 RRP4; exosome complex component RRP4 
E        108323116 exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
D      Cofactors
E        108343709 exosome complex component RRP41 homolog	K11600 RRP41; exosome complex component RRP41 
E        108337855 exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
D      Others
!
#<hr>
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#Last updated: April 25, 2024