+D GENES KO
#
KEGG Orthology (KO) - Vibrio ruber
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:vru00010]
D RND59_12975 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RND59_07945 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RND59_01795 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_04865 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_04105 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RND59_04860 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RND59_01810 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RND59_08855 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RND59_04775 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RND59_19995 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RND59_00075 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RND59_08850 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RND59_07740 gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RND59_03560 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RND59_08870 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RND59_11685 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RND59_11835 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RND59_03375 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RND59_03370 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RND59_03365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RND59_01680 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RND59_11565 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RND59_18935 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RND59_16405 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RND59_07545 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RND59_16330 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RND59_04150 hypothetical protein K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D RND59_11015 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RND59_00080 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D RND59_07300 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RND59_17125 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_06485 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_08905 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_17830 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_18225 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_20480 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_03920 family 1 glycosylhydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_05645 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_01330 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RND59_11655 ptsG; PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D RND59_18230 ascF; PTS cellobiose/arbutin/salicin transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:vru00020]
D RND59_11035 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RND59_15620 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RND59_03215 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RND59_12350 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RND59_11060 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RND59_11065 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RND59_03365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RND59_11080 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RND59_11075 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RND59_11050 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RND59_11055 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RND59_11040 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RND59_11045 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RND59_04705 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RND59_11810 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RND59_04710 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RND59_11805 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RND59_04715 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D RND59_11800 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D RND59_04720 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D RND59_11795 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D RND59_13155 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RND59_02715 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RND59_08500 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RND59_07300 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RND59_03375 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RND59_03370 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:vru00030]
D RND59_07945 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RND59_18895 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RND59_18890 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D RND59_18885 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RND59_04580 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RND59_19895 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RND59_05075 transketolase C-terminal domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RND59_05080 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RND59_08840 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RND59_19900 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RND59_03705 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RND59_09860 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RND59_19645 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RND59_11430 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RND59_11015 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RND59_10615 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RND59_08425 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RND59_09280 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RND59_03275 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RND59_18235 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D RND59_08430 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RND59_09285 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RND59_01810 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RND59_08855 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RND59_04105 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RND59_04860 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RND59_01795 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_04865 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:vru00040]
D RND59_11745 polysaccharide lyase family 1 protein K01728 pel; pectate lyase [EC:4.2.2.2]
D RND59_09270 pectate lyase K01731 pelW; pectate disaccharide-lyase [EC:4.2.2.9]
D RND59_09240 exopolygalacturonate lyase K22994 pelX; pectate disaccharide-lyase [EC:4.2.2.9]
D RND59_09230 oligogalacturonate lyase family protein K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D RND59_09295 cupin domain-containing protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D RND59_09300 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D RND59_08435 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D RND59_08470 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D RND59_08995 D-galactonate dehydratase family protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D RND59_08440 fructuronate reductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D RND59_18600 uidA; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D RND59_05240 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RND59_08155 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RND59_03335 yiaK; 3-dehydro-L-gulonate 2-dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D RND59_03310 FGGY-family carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D RND59_02110 3-keto-L-gulonate-6-phosphate decarboxylase UlaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D RND59_03305 3-keto-L-gulonate-6-phosphate decarboxylase UlaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D RND59_02115 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D RND59_03295 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D RND59_02100 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D RND59_03315 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D RND59_06755 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D RND59_04580 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RND59_06760 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D RND59_06750 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D RND59_19460 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RND59_19445 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
C 00051 Fructose and mannose metabolism [PATH:vru00051]
D RND59_04515 glycoside hydrolase family 5 protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D RND59_17530 mak; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RND59_12075 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RND59_07430 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RND59_17545 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RND59_05225 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RND59_05230 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RND59_05170 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RND59_05085 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RND59_01795 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_04865 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_04105 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RND59_04860 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RND59_17795 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D RND59_19545 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RND59_19445 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RND59_01810 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RND59_08855 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RND59_04775 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RND59_05165 GDP-mannose 4,6-dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D RND59_19210 alsE; D-allulose 6-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-]
D RND59_19190 fructose PTS transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D RND59_19195 fructose PTS transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D RND59_19200 fructose PTS transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D RND59_02075 fructose PTS transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D RND59_19205 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RND59_19540 fruA; PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RND59_17800 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D RND59_11300 HAD-IA family hydrolase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D RND59_13315 hxpB; hexitol phosphatase HxpB K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
C 00052 Galactose metabolism [PATH:vru00052]
D RND59_16330 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RND59_16335 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RND59_13440 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RND59_16340 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RND59_13435 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RND59_15880 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RND59_13430 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RND59_08155 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RND59_11015 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RND59_12975 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RND59_16975 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RND59_13420 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D RND59_20200 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RND59_01795 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_04865 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_17860 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D RND59_12070 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D RND59_08445 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RND59_08970 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:vru00053]
D RND59_05240 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RND59_18600 uidA; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D RND59_03275 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RND59_14900 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D RND59_01820 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D RND59_02095 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D RND59_14895 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D RND59_01800 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D RND59_02090 PTS ascorbate-specific subunit IIBC K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D RND59_14890 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D RND59_01805 PTS sugar transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D RND59_02080 ulaG; L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D RND59_02110 3-keto-L-gulonate-6-phosphate decarboxylase UlaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D RND59_03305 3-keto-L-gulonate-6-phosphate decarboxylase UlaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D RND59_02115 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D RND59_03295 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D RND59_02100 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D RND59_03315 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D RND59_06755 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D RND59_03335 yiaK; 3-dehydro-L-gulonate 2-dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D RND59_03310 FGGY-family carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:vru00500]
D RND59_17865 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D RND59_12060 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D RND59_17860 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D RND59_12070 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D RND59_08445 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RND59_08970 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RND59_08155 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RND59_16615 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RND59_19280 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RND59_16040 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RND59_15920 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RND59_16015 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RND59_19470 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RND59_11925 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RND59_00185 glycoside hydrolase family 6 protein K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D RND59_16030 glycosyl transferase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D RND59_18620 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D RND59_05640 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D RND59_06465 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D RND59_08900 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D RND59_18615 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D RND59_05655 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D RND59_06475 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D RND59_08890 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D RND59_18610 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D RND59_05650 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D RND59_05660 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D RND59_06480 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D RND59_08895 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D RND59_17125 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_06485 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_08905 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_17830 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_18225 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_20480 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_03920 family 1 glycosylhydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_05645 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RND59_15735 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RND59_12405 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RND59_12410 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D RND59_17650 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RND59_17660 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RND59_12845 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RND59_16775 starch-binding protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D RND59_17655 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RND59_12850 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RND59_01330 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RND59_07570 alpha-glucoside-specific PTS transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D RND59_07565 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D RND59_18285 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D RND59_11015 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RND59_12975 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RND59_07945 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RND59_17530 mak; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RND59_12075 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:vru00520]
D RND59_02765 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RND59_01330 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RND59_15580 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RND59_13620 nagK; N-acetylglucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D RND59_15590 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D RND59_15585 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D RND59_08375 BadF/BadG/BcrA/BcrD ATPase family protein K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D RND59_17530 mak; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RND59_12075 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RND59_08880 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RND59_03130 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RND59_06275 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RND59_02775 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D RND59_02770 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RND59_03960 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RND59_07635 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RND59_15010 alpha-L-arabinofuranosidase C-terminal domain-containing protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RND59_11655 ptsG; PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D RND59_12975 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RND59_11015 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RND59_08155 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RND59_05240 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RND59_16335 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RND59_13440 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RND59_16340 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RND59_13435 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RND59_15880 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RND59_13430 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RND59_07945 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RND59_07430 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RND59_17545 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RND59_05225 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RND59_05230 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RND59_05170 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RND59_05165 GDP-mannose 4,6-dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D RND59_05085 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RND59_15735 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RND59_12405 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:vru00620]
D RND59_07545 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RND59_03375 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RND59_03370 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RND59_03365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RND59_15285 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RND59_11565 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RND59_01680 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RND59_18935 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RND59_16070 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RND59_12090 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RND59_12085 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RND59_08870 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RND59_11685 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RND59_10270 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RND59_17495 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RND59_07535 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RND59_07530 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RND59_01195 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RND59_13950 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RND59_16405 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RND59_16275 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D RND59_17645 FAD-binding and (Fe-S)-binding domain-containing protein K18930 dld; D-lactate dehydrogenase
D RND59_01155 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RND59_07175 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RND59_14085 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RND59_10295 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RND59_14430 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RND59_04825 malic enzyme-like NAD(P)-binding protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RND59_09375 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D RND59_09380 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RND59_09370 oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D RND59_08500 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RND59_13155 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RND59_02715 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RND59_04705 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RND59_11810 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RND59_04710 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RND59_11805 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RND59_04715 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D RND59_11800 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D RND59_04720 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D RND59_11795 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D RND59_04670 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RND59_07300 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RND59_11835 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RND59_02410 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D RND59_18835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_20535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_18185 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RND59_03775 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:vru00630]
D RND59_02405 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D RND59_07545 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RND59_02410 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D RND59_08500 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RND59_11035 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RND59_15620 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RND59_03215 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RND59_18835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_20535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_20540 SDR family oxidoreductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RND59_09005 catalase K03781 katE; catalase [EC:1.11.1.6]
D RND59_03890 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D RND59_04575 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RND59_08170 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RND59_07270 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RND59_01440 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RND59_13040 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RND59_16110 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RND59_16095 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RND59_03365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RND59_16105 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RND59_19525 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RND59_08425 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RND59_09280 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RND59_00045 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RND59_13065 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RND59_00845 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:vru00640]
D RND59_07545 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RND59_13225 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RND59_16070 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RND59_12090 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RND59_12085 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RND59_03365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RND59_15285 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RND59_09070 MDR family oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D RND59_06285 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D RND59_00970 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RND59_10270 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RND59_17495 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RND59_07535 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RND59_07530 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RND59_01195 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RND59_03740 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RND59_11075 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RND59_11080 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RND59_13215 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RND59_13220 bifunctional 2-methylcitrate dehydratase/aconitate hydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D RND59_03215 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RND59_13210 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D RND59_15740 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D RND59_18630 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:vru00650]
D RND59_18835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_20535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_06285 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D RND59_00970 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RND59_14655 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D RND59_15980 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D RND59_11565 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RND59_20525 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RND59_20540 SDR family oxidoreductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RND59_09380 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RND59_00305 hypothetical protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
D RND59_11050 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RND59_11055 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RND59_11040 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RND59_11045 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RND59_04705 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RND59_11810 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RND59_04710 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RND59_11805 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RND59_04715 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D RND59_11800 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D RND59_04720 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D RND59_11795 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D RND59_03740 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RND59_03735 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RND59_15285 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RND59_17255 AMP-binding protein K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RND59_01095 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_03755 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_06010 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_06645 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_09545 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_03750 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RND59_06015 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D RND59_01090 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D RND59_01100 SDR family oxidoreductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:vru00660]
D RND59_01095 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_03755 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_06010 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_06645 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_09545 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_03750 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RND59_06015 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D RND59_01090 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D RND59_11075 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RND59_11080 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RND59_03785 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RND59_03790 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RND59_03780 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:vru00562]
D RND59_02370 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RND59_04775 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:vru00190]
D RND59_15380 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RND59_11050 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RND59_11055 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RND59_11040 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RND59_11045 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RND59_04705 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RND59_11810 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RND59_04710 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RND59_11805 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RND59_04715 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D RND59_11800 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D RND59_04720 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D RND59_11795 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D RND59_17665 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RND59_17670 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D RND59_17675 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D RND59_17680 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D RND59_17685 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D RND59_15210 cydA; cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RND59_15205 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RND59_15200 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D RND59_06255 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RND59_06265 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RND59_06260 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RND59_06250 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RND59_06270 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RND59_06235 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RND59_06245 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RND59_06240 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RND59_04110 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RND59_02445 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:vru00680]
D RND59_20360 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D RND59_01680 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RND59_01685 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D RND59_08240 fdhF; formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D RND59_01440 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RND59_13040 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RND59_08170 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RND59_03890 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D RND59_03560 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RND59_04670 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RND59_08500 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RND59_01810 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RND59_08855 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RND59_04105 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RND59_04860 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RND59_01795 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_04865 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_16070 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RND59_12090 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RND59_12085 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RND59_07545 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RND59_11835 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RND59_07740 gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RND59_19140 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RND59_03715 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RND59_14600 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RND59_14025 HAD-IB family phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RND59_09875 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:vru00910]
D RND59_00275 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RND59_00270 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D RND59_00265 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D RND59_00255 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D RND59_00285 nirB; nitrite reductase large subunit NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D RND59_00280 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D RND59_18645 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D RND59_16195 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RND59_13850 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RND59_07270 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RND59_09750 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RND59_09760 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RND59_09745 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RND59_09755 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RND59_03350 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D RND59_17445 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:vru00920]
D RND59_04220 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RND59_04225 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RND59_04210 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D RND59_07375 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RND59_08065 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RND59_08055 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D RND59_08060 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D RND59_04565 FAD/NAD(P)-binding oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RND59_19910 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RND59_07030 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D RND59_04680 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RND59_00365 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RND59_01315 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RND59_12785 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D RND59_04840 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:vru00061]
D RND59_10270 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RND59_17495 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RND59_07535 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RND59_07530 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RND59_01195 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RND59_11315 acyl carrier protein K02078 acpP; acyl carrier protein
D RND59_11620 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RND59_11610 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RND59_11355 ketoacyl-ACP synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RND59_11365 3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RND59_11385 ketoacyl-ACP synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RND59_11605 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RND59_12525 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RND59_10980 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RND59_11625 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RND59_11615 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RND59_13815 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D RND59_10245 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RND59_14655 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D RND59_15980 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D RND59_00010 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:vru00071]
D RND59_18835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_20535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_00975 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RND59_06280 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RND59_06285 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D RND59_00970 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RND59_10325 fadE; acyl-CoA dehydrogenase FadE K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D RND59_00010 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RND59_18210 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D RND59_01680 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RND59_11565 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:vru00561]
D RND59_19525 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RND59_18935 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RND59_17940 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RND59_07055 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D RND59_11600 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RND59_09150 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RND59_03955 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RND59_17535 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RND59_07060 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RND59_20200 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:vru00564]
D RND59_04685 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RND59_17950 glpA; anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RND59_11770 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RND59_17955 glpB; glycerol-3-phosphate dehydrogenase subunit GlpB K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D RND59_17960 glpC; anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D RND59_07055 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D RND59_09150 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RND59_03955 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RND59_17535 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RND59_07060 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RND59_08130 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D RND59_06965 alpha/beta fold hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D RND59_16425 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RND59_13555 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RND59_18210 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D RND59_19940 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D RND59_19935 eutC; ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D RND59_10215 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RND59_07625 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RND59_07755 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RND59_14340 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RND59_10170 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D RND59_14275 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RND59_05865 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:vru00565]
D RND59_08130 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:vru00600]
D RND59_16025 GH116 family glycosyl hydrolase K17108 GBA2; non-lysosomal glucosylceramidase [EC:3.2.1.45]
D RND59_16975 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RND59_08930 sulfatase-like hydrolase/transferase K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D RND59_20200 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
D RND59_08130 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D RND59_08130 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:vru00592]
D RND59_08130 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D RND59_00975 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RND59_06280 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:vru01040]
D RND59_15975 tesA; multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RND59_00355 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D RND59_14535 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:vru00230]
D RND59_15870 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RND59_03510 nudF; ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RND59_07380 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D RND59_11015 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RND59_10615 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RND59_01175 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RND59_07420 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RND59_10355 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RND59_12580 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D RND59_01655 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D RND59_10360 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RND59_05925 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RND59_05920 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RND59_14420 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RND59_12275 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RND59_07425 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RND59_00950 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RND59_20030 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RND59_10660 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RND59_09190 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RND59_12290 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D RND59_09865 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RND59_02670 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RND59_16665 phosphoribosyltransferase family protein K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RND59_03355 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RND59_02265 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RND59_02315 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RND59_02705 yjjX; inosine/xanthosine triphosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D RND59_08650 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RND59_10110 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D RND59_02260 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RND59_16860 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D RND59_20255 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D RND59_04945 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RND59_14110 nrdA; class 1a ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RND59_14115 nrdB; class Ia ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RND59_20310 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RND59_02125 dgt; dGTPase K01129 dgt; dGTPase [EC:3.1.5.1]
D RND59_00835 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D RND59_04955 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RND59_02450 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RND59_07585 gppA; guanosine-5'-triphosphate,3'-diphosphate diphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RND59_03575 relA; GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D RND59_06890 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D RND59_04420 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RND59_10345 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D RND59_01505 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D RND59_09925 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D RND59_04235 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RND59_01235 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RND59_03570 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RND59_14745 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D RND59_01785 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D RND59_03500 cpdA; 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D RND59_08540 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D RND59_04210 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D RND59_04220 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RND59_04225 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RND59_20250 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RND59_12875 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D RND59_19295 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5]
D RND59_19360 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D RND59_19355 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D RND59_19350 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:vru00240]
D RND59_09710 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RND59_09705 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RND59_03940 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RND59_03945 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D RND59_18735 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RND59_13845 pyrD; quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RND59_05355 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RND59_15460 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RND59_10200 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RND59_02315 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RND59_03570 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RND59_08310 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RND59_03565 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RND59_15485 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RND59_01005 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D RND59_20030 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RND59_10660 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RND59_09190 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RND59_19955 yjjG; pyrimidine 5'-nucleotidase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D RND59_01025 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D RND59_10365 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RND59_04235 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RND59_01505 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D RND59_14750 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RND59_12585 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RND59_13015 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RND59_20310 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RND59_14110 nrdA; class 1a ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RND59_14115 nrdB; class Ia ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RND59_00835 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D RND59_10345 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D RND59_18670 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RND59_19000 hypothetical protein K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RND59_11640 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RND59_12500 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RND59_02835 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:vru00250]
D RND59_03645 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RND59_17230 type II asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RND59_00055 ansA; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RND59_11455 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RND59_04425 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RND59_11470 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RND59_01220 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RND59_00430 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RND59_08170 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RND59_01650 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RND59_04910 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D RND59_04650 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RND59_19575 lyase family protein K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RND59_04420 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RND59_12275 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RND59_03940 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RND59_03945 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D RND59_03740 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RND59_03735 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RND59_09750 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RND59_09760 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RND59_09745 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RND59_09755 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RND59_13850 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RND59_17770 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RND59_07270 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RND59_09710 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RND59_09705 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RND59_08640 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D RND59_08880 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RND59_01175 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:vru00260]
D RND59_17235 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RND59_08175 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RND59_09330 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RND59_09795 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RND59_04845 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D RND59_10990 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RND59_11555 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RND59_09800 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D RND59_09805 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RND59_01440 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RND59_13040 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RND59_08170 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RND59_03890 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D RND59_19525 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RND59_07740 gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RND59_19140 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RND59_03715 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RND59_14600 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RND59_14025 HAD-IB family phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RND59_09875 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RND59_20475 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RND59_20470 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D RND59_16110 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RND59_16095 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RND59_03365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RND59_16105 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RND59_19590 hypothetical protein K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D RND59_07625 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RND59_06400 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D RND59_06405 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D RND59_13120 aromatic ring-hydroxylating dioxygenase subunit alpha K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D RND59_13125 hybrid-cluster NAD(P)-dependent oxidoreductase K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D RND59_13090 dgcA; dimethylglycine demethylation protein DgcA K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
D RND59_13095 (Fe-S)-binding protein K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
D RND59_13100 electron transfer flavoprotein subunit alpha/FixB family protein K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha
D RND59_13105 electron transfer flavoprotein subunit beta K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta
D RND59_13055 sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D RND59_13045 sarcosine oxidase subunit beta family protein K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D RND59_13060 sarcosine oxidase subunit gamma family protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D RND59_13050 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D RND59_13070 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RND59_13135 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RND59_06030 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RND59_14940 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D RND59_17590 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RND59_14515 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RND59_14510 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RND59_14155 pyridoxal phosphate-dependent class III aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RND59_17245 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RND59_17250 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D RND59_17240 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:vru00270]
D RND59_04680 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RND59_00365 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RND59_01315 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RND59_14280 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RND59_08140 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RND59_14550 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RND59_17335 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RND59_08835 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RND59_18115 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RND59_15490 acyl-homoserine-lactone synthase K13062 ainS; acyl homoserine lactone synthase [EC:2.3.1.184]
D RND59_09740 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D RND59_02670 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RND59_16920 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RND59_13030 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RND59_13880 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D RND59_09405 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RND59_19695 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D RND59_17235 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RND59_08175 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RND59_09330 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RND59_09795 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RND59_04845 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D RND59_10990 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RND59_11555 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RND59_12785 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D RND59_04840 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RND59_17005 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RND59_06020 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RND59_09400 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RND59_08820 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RND59_19910 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RND59_17590 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RND59_08500 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RND59_13070 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RND59_13135 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RND59_19140 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RND59_03715 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RND59_14600 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:vru00280]
D RND59_17005 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RND59_06020 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RND59_03365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RND59_06285 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D RND59_00970 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RND59_00975 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RND59_06280 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RND59_11930 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RND59_03740 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RND59_17255 AMP-binding protein K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RND59_18835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_20535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:vru00290]
D RND59_06030 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RND59_03785 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RND59_03790 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RND59_03780 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RND59_01095 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_03755 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_06010 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_06645 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_09545 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_03750 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RND59_06015 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D RND59_05850 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RND59_06025 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RND59_17005 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RND59_06020 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RND59_06085 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D RND59_00430 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RND59_18185 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RND59_03775 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:vru00300]
D RND59_17235 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RND59_08175 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RND59_09330 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RND59_09795 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RND59_04845 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D RND59_10990 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RND59_11555 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RND59_10735 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RND59_11435 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RND59_09700 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RND59_09930 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RND59_04490 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RND59_10755 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RND59_06910 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RND59_06905 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RND59_11395 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RND59_00175 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RND59_09630 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RND59_09635 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:vru00310]
D RND59_11065 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RND59_03365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RND59_06285 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D RND59_00970 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RND59_18835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_20535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_17590 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RND59_03740 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RND59_03735 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RND59_14390 FAD-binding and (Fe-S)-binding domain-containing protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D RND59_19585 KamA family radical SAM protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D RND59_11970 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:vru00220]
D RND59_03935 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RND59_04650 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RND59_19575 lyase family protein K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RND59_17500 carboxyltransferase domain-containing protein K01941 uca; urea carboxylase [EC:6.3.4.6]
D RND59_08640 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D RND59_07270 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RND59_09710 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RND59_09705 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RND59_13850 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RND59_00430 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RND59_09965 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D RND59_04655 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RND59_04660 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RND59_04490 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RND59_04665 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:vru00330]
D RND59_19590 hypothetical protein K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D RND59_13015 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RND59_17110 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RND59_18115 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RND59_14150 saccharopine dehydrogenase family protein K13746 cansdh; carboxynorspermidine synthase [EC:1.5.1.43]
D RND59_14145 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RND59_17145 speG; spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D RND59_19345 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RND59_18945 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D RND59_18950 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D RND59_04485 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D RND59_18960 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D RND59_18955 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D RND59_18965 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D RND59_12720 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D RND59_08795 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RND59_08405 proline dehydrogenase family protein K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D RND59_17770 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RND59_10125 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RND59_10130 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RND59_11970 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:vru00340]
D RND59_12305 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RND59_12340 hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D RND59_12330 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RND59_12325 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RND59_12335 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RND59_12320 hisB; bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D RND59_12315 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RND59_12310 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RND59_00855 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RND59_00840 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D RND59_00850 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D RND59_00865 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D RND59_00845 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D RND59_16215 flavocytochrome c K17363 urdA; urocanate reductase [EC:1.3.99.33]
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:vru00350]
D RND59_12315 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RND59_16920 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RND59_13030 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RND59_14870 FAD-binding oxidoreductase K25271 tynA; tyramine oxidase subunit A [EC:1.4.3.-]
D RND59_09520 FAD-binding oxidoreductase K25271 tynA; tyramine oxidase subunit A [EC:1.4.3.-]
D RND59_14875 tyramine oxidase subunit B K25272 tynB; tyramine oxidase subunit B [EC:1.4.3.-]
D RND59_09530 tyramine oxidase subunit B K25272 tynB; tyramine oxidase subunit B [EC:1.4.3.-]
D RND59_01680 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RND59_11565 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RND59_07990 4-hydroxyphenylacetate 3-hydroxylase N-terminal domain-containing protein K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D RND59_04770 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D RND59_03735 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:vru00360]
D RND59_12315 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RND59_16920 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RND59_13030 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RND59_11970 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RND59_01640 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RND59_19345 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RND59_09580 bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D RND59_09585 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00380 Tryptophan metabolism [PATH:vru00380]
D RND59_11065 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RND59_03365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RND59_06285 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D RND59_00970 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RND59_18835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_20535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RND59_19345 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RND59_09005 catalase K03781 katE; catalase [EC:1.11.1.6]
D RND59_01640 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:vru00400]
D RND59_13900 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RND59_17550 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RND59_02750 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RND59_08010 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RND59_04595 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RND59_07540 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RND59_05905 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RND59_04600 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RND59_12390 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RND59_10955 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RND59_14490 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RND59_14495 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RND59_14500 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RND59_14505 trpCF; bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D RND59_14515 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RND59_14510 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RND59_02745 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D RND59_12885 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D RND59_02690 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D RND59_17480 transporter substrate-binding domain-containing protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D RND59_16415 prephenate dehydratase domain-containing protein K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D RND59_12315 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RND59_16920 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RND59_13030 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:vru00410]
D RND59_03740 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RND59_03260 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RND59_06285 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D RND59_00970 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:vru00430]
D RND59_05695 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RND59_01650 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RND59_13850 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RND59_12085 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RND59_16070 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RND59_12090 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:vru00450]
D RND59_04840 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RND59_14280 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RND59_08140 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RND59_14550 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RND59_17335 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RND59_14460 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RND59_04220 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RND59_04225 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RND59_14785 hypothetical protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RND59_01015 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:vru00460]
D RND59_16615 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RND59_19280 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RND59_16040 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RND59_05695 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RND59_17230 type II asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RND59_00055 ansA; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RND59_11455 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RND59_04425 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RND59_11470 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RND59_01440 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RND59_13040 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:vru00470]
D RND59_11955 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RND59_11970 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RND59_20070 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RND59_17590 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RND59_08640 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D RND59_07200 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RND59_09645 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RND59_11960 dgcN; N-acetyltransferase DgcN K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D RND59_11965 dgcA; N-acetyl-D-Glu racemase DgcA K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D RND59_14940 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D RND59_06910 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RND59_06905 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RND59_11395 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RND59_12825 alanine/ornithine racemase family PLP-dependent enzyme K21898 orr; ornithine racemase [EC:5.1.1.12]
C 00480 Glutathione metabolism [PATH:vru00480]
D RND59_05695 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RND59_17490 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D RND59_11950 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D RND59_11940 pxpB; 5-oxoprolinase subunit PxpB K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D RND59_11945 biotin-dependent carboxyltransferase family protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D RND59_09400 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RND59_08820 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RND59_03865 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RND59_02320 pepB; aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D RND59_13860 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RND59_10100 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RND59_17055 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RND59_04830 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RND59_12895 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RND59_05730 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D RND59_12350 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RND59_18885 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RND59_18895 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RND59_04635 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D RND59_15810 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D RND59_17110 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RND59_18115 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:vru00511]
D RND59_16975 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RND59_16025 GH116 family glycosyl hydrolase K17108 GBA2; non-lysosomal glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:vru00540]
D RND59_10250 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RND59_09680 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RND59_10240 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RND59_15240 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RND59_10255 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RND59_15330 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RND59_04000 kdsD; arabinose-5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RND59_10655 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RND59_04005 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RND59_15320 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RND59_05270 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RND59_05345 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RND59_05350 lpxM; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D RND59_16690 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RND59_17540 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RND59_05280 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D RND59_05060 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RND59_10330 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RND59_03520 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D RND59_01460 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RND59_05235 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D RND59_05090 hypothetical protein K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D RND59_05065 sugar phosphate nucleotidyltransferase K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
D RND59_05250 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RND59_05260 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:vru00541]
D RND59_08155 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RND59_15880 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RND59_13430 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RND59_05240 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RND59_07430 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RND59_17545 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RND59_05225 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RND59_05230 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RND59_05170 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RND59_05165 GDP-mannose 4,6-dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D RND59_05085 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RND59_06275 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RND59_05150 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D RND59_05145 NAD-dependent epimerase/dehydratase family protein K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
C 00550 Peptidoglycan biosynthesis [PATH:vru00550]
D RND59_03960 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RND59_07635 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RND59_09660 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RND59_09645 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RND59_09630 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RND59_20070 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RND59_09635 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RND59_10210 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RND59_09165 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RND59_03770 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RND59_09640 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RND59_09655 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RND59_04625 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RND59_03220 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D RND59_15680 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RND59_01395 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RND59_09625 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RND59_01410 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RND59_03165 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:vru00552]
D RND59_09165 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RND59_03770 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RND59_05150 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:vru00543]
D RND59_03030 undecaprenyl-phosphate glucose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D RND59_20150 hypothetical protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D RND59_04680 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RND59_02970 hypothetical protein K25903 pssD; exopolysaccharide biosynthesis glucuronosyltransferase PssD
D RND59_02965 glycosyltransferase K25904 pssE; exopolysaccharide biosynthesis glucuronosyltransferase PssE
D RND59_02960 acyltransferase K25912 pssR; exopolysaccharide acyltransferase PssR
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:vru00730]
D RND59_06355 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RND59_12035 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RND59_06365 HesA/MoeB/ThiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D RND59_02355 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RND59_01535 thiI; tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D RND59_06380 thiH; 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D RND59_01565 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RND59_06375 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D RND59_06360 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RND59_10165 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RND59_07760 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RND59_17305 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RND59_01235 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:vru00740]
D RND59_14090 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RND59_10150 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RND59_10140 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RND59_06925 yigB; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D RND59_10155 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RND59_10145 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RND59_13600 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RND59_02810 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RND59_07620 fre; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D RND59_02485 nfsA; oxygen-insensitive NADPH nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D RND59_15870 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RND59_03510 nudF; ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RND59_17615 non-oxidative hydroxyarylic acid decarboxylases subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RND59_04095 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:vru00750]
D RND59_17750 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RND59_08845 epd; erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D RND59_10985 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D RND59_14600 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RND59_08555 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D RND59_03595 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D RND59_09805 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:vru00760]
D RND59_03645 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RND59_15155 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RND59_03410 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RND59_17195 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RND59_09865 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RND59_20030 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RND59_10660 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RND59_09190 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RND59_17430 nicotinate-nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RND59_03570 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RND59_07720 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RND59_17435 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RND59_09310 pncC; nicotinamide-nucleotide amidase K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RND59_14010 pncA; bifunctional nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D RND59_13655 cobB; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RND59_01735 nadK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RND59_07075 sthA; Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D RND59_20125 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RND59_20120 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RND59_00305 hypothetical protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
D RND59_03735 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:vru00770]
D RND59_01095 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_03755 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_06010 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_06645 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_09545 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RND59_03750 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RND59_06015 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D RND59_05850 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RND59_06025 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RND59_03255 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RND59_09995 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RND59_03260 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RND59_07645 coaA; type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D RND59_05335 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RND59_03570 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RND59_05300 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RND59_03440 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RND59_03590 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RND59_18405 ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D RND59_17005 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RND59_06020 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RND59_14635 panP; putative pyridoxal-dependent aspartate 1-decarboxylase K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11]
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:vru00780]
D RND59_12220 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D RND59_10980 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RND59_11625 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RND59_11615 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RND59_10245 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RND59_07395 bioH; pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D RND59_12215 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RND59_12205 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RND59_12225 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D RND59_12210 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D RND59_07640 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:vru00785]
D RND59_01425 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RND59_01430 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RND59_03365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RND59_03375 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RND59_03370 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RND59_11060 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RND59_11065 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RND59_16110 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RND59_16095 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RND59_16105 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:vru00790]
D RND59_19925 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RND59_17305 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RND59_09155 folB; bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RND59_03250 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RND59_09160 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RND59_03135 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RND59_08535 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RND59_01190 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RND59_14090 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RND59_10150 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RND59_04495 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D RND59_13150 pabB; aminodeoxychorismate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D RND59_11630 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D RND59_13130 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RND59_13240 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RND59_13245 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RND59_01490 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RND59_06640 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RND59_01055 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RND59_01045 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RND59_01035 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RND59_01050 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RND59_19920 moeA; molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RND59_13630 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:vru00670]
D RND59_08535 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RND59_15705 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RND59_01440 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RND59_13040 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RND59_10355 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RND59_07425 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RND59_05950 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RND59_16095 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RND59_08140 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RND59_02835 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RND59_00045 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RND59_13065 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RND59_04850 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RND59_03700 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:vru00860]
D RND59_10390 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RND59_10630 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RND59_03185 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RND59_06835 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RND59_06885 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RND59_06880 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RND59_07725 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RND59_05910 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RND59_06865 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D RND59_06300 hemG; menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D RND59_01230 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RND59_06875 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RND59_16765 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RND59_04230 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RND59_13915 NAD(P)-dependent oxidoreductase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D RND59_17665 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RND59_16720 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RND59_16715 cobalt-factor II C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D RND59_16730 precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D RND59_16740 cobalt-precorrin-4 methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RND59_16735 cobalt-precorrin 5A hydrolase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D RND59_16725 cobK; precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D RND59_16755 cbiD; cobalt-precorrin-5B (C(1))-methyltransferase CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D RND59_16745 decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D RND59_16750 cobalt-precorrin-7 (C(5))-methyltransferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D RND59_16760 cobalt-precorrin-8 methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RND59_15825 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RND59_00995 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RND59_15765 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RND59_15820 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RND59_09735 cobalamin biosynthesis family protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RND59_12925 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RND59_12715 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RND59_12710 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RND59_16770 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D RND59_12930 cobD; threonine-phosphate decarboxylase CobD K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D RND59_18600 uidA; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D RND59_07905 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:vru00130]
D RND59_07045 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D RND59_07050 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RND59_07610 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D RND59_17615 non-oxidative hydroxyarylic acid decarboxylases subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RND59_04095 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RND59_03675 FAD-dependent 2-octaprenylphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D RND59_14105 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D RND59_03680 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RND59_06790 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RND59_01335 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D RND59_00425 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D RND59_14950 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D RND59_00420 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D RND59_00415 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D RND59_00405 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D RND59_00400 menE; o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D RND59_00410 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D RND59_20045 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D RND59_04790 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RND59_16495 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RND59_10680 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RND59_11995 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:vru00900]
D RND59_01565 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RND59_10220 ispC; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RND59_09175 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RND59_10620 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RND59_09180 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RND59_02300 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RND59_02790 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RND59_18835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_20535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_17615 non-oxidative hydroxyarylic acid decarboxylases subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RND59_04095 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RND59_01560 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RND59_08505 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RND59_10210 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:vru00907]
D RND59_06285 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D RND59_00970 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RND59_00975 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RND59_06280 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
D RND59_08025 amino acid adenylation domain-containing protein K16416 mxaA; myxalamid-type nonribosomal peptide synthetase MxaA
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RND59_19895 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RND59_05075 transketolase C-terminal domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RND59_05080 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RND59_08840 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:vru01053]
D RND59_00425 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D RND59_14950 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D RND59_14960 isochorismatase family protein K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D RND59_14945 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D RND59_08005 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D RND59_06945 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D RND59_14955 (2,3-dihydroxybenzoyl)adenylate synthase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:vru00946]
D RND59_16615 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RND59_19280 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RND59_16040 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RND59_19570 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:vru00332]
D RND59_10125 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RND59_10130 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RND59_08400 2Fe-2S iron-sulfur cluster binding domain-containing protein K18319 cpmE; carbapenem biosynthesis protein CpmE
D RND59_08415 enoyl-CoA hydratase/isomerase family protein K18317 cpmB; carboxymethylproline synthase [EC:2.3.1.226]
D RND59_08420 asparagine synthetase B family protein K18316 cpmA; carbapenam-3-carboxylate synthase [EC:6.3.3.6]
D RND59_08410 TauD/TfdA family dioxygenase K18315 cpmC; (5R)-carbapenem-3-carboxylate synthase [EC:1.14.20.3]
C 00261 Monobactam biosynthesis [PATH:vru00261]
D RND59_14995 MbtH family protein K05375 mbtH; MbtH protein
D RND59_19565 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein
D RND59_06950 MbtH family protein K05375 mbtH; MbtH protein
D RND59_04220 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RND59_04225 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RND59_17235 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RND59_08175 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RND59_09330 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RND59_09795 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RND59_04845 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D RND59_10990 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RND59_11555 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RND59_10735 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RND59_11435 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RND59_09700 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:vru00521]
D RND59_12975 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RND59_11015 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RND59_02370 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RND59_12975 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:vru00401]
D RND59_02745 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D RND59_12315 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RND59_16920 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RND59_13030 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:vru00405]
D RND59_07995 anthranilate synthase family protein K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86]
D RND59_08000 isochorismatase family protein K20261 phzD; trans-2,3-dihydro-3-hydroxyanthranilic acid synthase [EC:3.3.2.15]
D RND59_14490 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RND59_14495 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis [PATH:vru00333]
D RND59_13775 hypothetical protein K21428 pigD; 3-acetyloctanal synthase [EC:2.2.1.12]
D RND59_13770 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K21778 pigE; 3-acetyloctanal aminotransferase [EC:2.6.1.-]
D RND59_13785 DUF6041 domain-containing protein K21779 pigB; 2-methyl-3-n-amyl-dihydropyrrolel dehydrogenase
D RND59_13750 D-alanine--poly(phosphoribitol) ligase K21780 pigI; L-proline---[L-prolyl-carrier protein] ligase [EC:6.2.1.53]
D RND59_13760 acyl carrier protein K21781 pigG; peptidyl carrier protein
D RND59_20195 acyl-CoA dehydrogenase family protein K21782 pigA; L-prolyl-PCP dehydrogenase [EC:1.3.8.14]
D RND59_13745 polyketide synthase K21783 pigJ; beta-ketoacyl ACP synthase [EC:2.3.1.-]
D RND59_13755 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K21784 pigH; 4-hydroxy-2,2'-bipyrrole-5-methanol synthase
D RND59_13730 hypothetical protein K21785 pigM; 4-hydroxy-2,2'-bipyrrole-5-methanol dehydrogenase
D RND59_13765 methyltransferase K21786 pigF; 4-hydroxy-2,2'-bipyrrole-5-carbaldehyde O-methyltransferase [EC:2.1.1.-]
D RND59_13780 PEP/pyruvate-binding domain-containing protein K21787 pigC; prodigiosin/undecylprodigiosin synthetase
D RND59_11610 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RND59_11615 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RND59_11315 acyl carrier protein K02078 acpP; acyl carrier protein
D RND59_11620 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:vru00999]
D RND59_08835 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RND59_05905 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RND59_16615 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RND59_19280 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RND59_16040 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:vru00997]
D RND59_12825 alanine/ornithine racemase family PLP-dependent enzyme K21898 orr; ornithine racemase [EC:5.1.1.12]
D RND59_04115 iron-containing redox enzyme family protein K23670 besC; 4-chloro-allylglycine synthase [EC:1.14.99.-]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:vru00362]
D RND59_00975 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RND59_06280 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RND59_09585 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D RND59_00300 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RND59_09590 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RND59_00970 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RND59_06285 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D RND59_09380 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RND59_18835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_20535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:vru00627]
D RND59_19345 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RND59_13950 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RND59_17610 non-oxidative hydroxyarylic acid decarboxylases subunit C K01612 bsdC; vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.- 4.1.1.61]
D RND59_17605 non-oxidative hydroxyarylic acid decarboxylases subunit D K21759 bsdD; vanillate/4-hydroxybenzoate decarboxylase subunit D [EC:4.1.1.- 4.1.1.61]
D RND59_17615 non-oxidative hydroxyarylic acid decarboxylases subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RND59_04095 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:vru00625]
D RND59_01680 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RND59_11565 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RND59_09550 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RND59_20360 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:vru00622]
D RND59_00300 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RND59_09585 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D RND59_00975 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RND59_06280 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:vru00643]
D RND59_19345 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
D RND59_17500 carboxyltransferase domain-containing protein K01941 uca; urea carboxylase [EC:6.3.4.6]
C 00930 Caprolactam degradation [PATH:vru00930]
D RND59_03275 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RND59_06285 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D RND59_00970 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:vru00621]
D RND59_00300 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RND59_09585 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00626 Naphthalene degradation [PATH:vru00626]
D RND59_01680 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RND59_11565 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:vru03020]
D RND59_07705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RND59_07710 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RND59_04270 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RND59_04950 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:vru03010]
D RND59_15480 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RND59_10190 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RND59_04365 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RND59_04275 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RND59_04310 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RND59_07910 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RND59_07885 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RND59_04325 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RND59_09470 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RND59_04400 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RND59_04280 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RND59_07880 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RND59_04285 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RND59_04330 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RND59_03085 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RND59_09425 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RND59_04350 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RND59_07920 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RND59_04375 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RND59_02820 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RND59_09135 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RND59_07690 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RND59_04380 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RND59_04395 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RND59_04390 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RND59_04335 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RND59_04320 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RND59_07700 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RND59_07925 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RND59_07695 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RND59_07685 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RND59_09465 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RND59_04345 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RND59_04300 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RND59_04360 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RND59_04265 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RND59_04315 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RND59_09440 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RND59_19865 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RND59_08510 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RND59_04370 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RND59_04385 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RND59_04340 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RND59_14230 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RND59_08515 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RND59_05320 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RND59_04355 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RND59_04305 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RND59_04820 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RND59_11595 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RND59_05315 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RND59_06145 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RND59_19860 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RND59_04290 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:vru00970]
D RND59_02635 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RND59_05805 tRNA-His K14226 tRNA-His; tRNA His
D RND59_05815 tRNA-His K14226 tRNA-His; tRNA His
D RND59_03115 tRNA-Met K14230 tRNA-Met; tRNA Met
D RND59_07775 tRNA-Met K14230 tRNA-Met; tRNA Met
D RND59_08605 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RND59_10390 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RND59_19040 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RND59_01210 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RND59_09325 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RND59_12495 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RND59_13035 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RND59_06075 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RND59_06080 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RND59_19850 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RND59_12145 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RND59_15230 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RND59_01015 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RND59_05950 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RND59_03875 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RND59_01370 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RND59_02805 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RND59_02885 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RND59_11125 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RND59_01615 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RND59_02295 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RND59_12560 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RND59_12565 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RND59_03170 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RND59_04570 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:vru03060]
D RND59_04295 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RND59_07675 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RND59_03125 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RND59_02380 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RND59_02375 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RND59_02385 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RND59_06160 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RND59_09690 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RND59_04690 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RND59_09420 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RND59_07010 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RND59_06805 tatE; twin-arginine translocase subunit TatE K03116 tatA; sec-independent protein translocase protein TatA
D RND59_06810 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RND59_06815 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D RND59_16460 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RND59_03615 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RND59_02800 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:vru04122]
D RND59_02355 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RND59_19910 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RND59_06040 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RND59_07875 tusB; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D RND59_07870 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D RND59_07865 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D RND59_13945 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D RND59_12285 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RND59_01035 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RND59_01055 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RND59_01040 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D RND59_19915 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D RND59_01045 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RND59_01050 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RND59_01535 thiI; tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D RND59_06370 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D RND59_06365 HesA/MoeB/ThiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:vru03018]
D RND59_02860 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RND59_11575 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RND59_07590 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D RND59_03560 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RND59_03080 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RND59_20410 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RND59_04410 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RND59_20490 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RND59_05680 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RND59_07600 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RND59_01795 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_04865 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_01715 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RND59_04750 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RND59_07820 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RND59_02445 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RND59_03245 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:vru03030]
D RND59_14060 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_19075 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_07550 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_10310 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_13380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_10265 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RND59_00945 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RND59_11645 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RND59_01380 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RND59_03040 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D RND59_03870 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RND59_06120 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RND59_07935 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RND59_09125 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RND59_08145 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RND59_10305 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RND59_10260 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RND59_06840 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RND59_01300 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:vru03410]
D RND59_01135 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RND59_09820 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RND59_08630 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RND59_05305 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RND59_17510 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RND59_15280 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RND59_09815 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RND59_06840 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RND59_03385 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RND59_01300 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:vru03420]
D RND59_15370 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RND59_08160 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RND59_01075 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RND59_14345 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RND59_05710 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RND59_06840 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RND59_01300 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:vru03430]
D RND59_09225 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RND59_07810 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RND59_02865 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D RND59_05710 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RND59_12600 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D RND59_02270 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RND59_01555 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RND59_03385 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RND59_08145 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RND59_10265 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RND59_06120 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RND59_00945 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RND59_01380 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RND59_11645 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RND59_14060 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_19075 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_07550 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_10310 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_13380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_03870 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RND59_03040 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D RND59_01300 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RND59_04585 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:vru03440]
D RND59_03385 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RND59_08145 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RND59_06115 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RND59_03600 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RND59_00935 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D RND59_09315 recA; recombinase RecA K03553 recA; recombination protein RecA
D RND59_06840 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RND59_15220 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RND59_15215 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RND59_15225 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RND59_04960 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RND59_09950 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D RND59_09945 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D RND59_09955 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RND59_10265 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RND59_06120 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RND59_00945 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RND59_01380 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RND59_11645 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RND59_14060 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_19075 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_07550 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_10310 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_13380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_03870 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RND59_03040 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D RND59_04815 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RND59_07915 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D RND59_15270 primosomal replication protein K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:vru03250]
D RND59_10005 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:vru02010]
D RND59_20230 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RND59_20225 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D RND59_20220 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RND59_04745 ATP-binding cassette domain-containing protein K05776 modF; molybdate transport system ATP-binding protein
D RND59_04090 thiB; thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D RND59_04085 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein
D RND59_04080 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D RND59_13660 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RND59_02695 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RND59_13665 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D RND59_13670 potB; spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein
D RND59_13675 potA; spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RND59_17470 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RND59_06395 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RND59_17465 proW; glycine betaine/L-proline ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein
D RND59_06390 choW; choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D RND59_17460 proV; glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RND59_06385 choV; choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RND59_12860 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D RND59_12865 malF; maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein
D RND59_12870 malG; maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein
D RND59_12855 malK; maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RND59_13395 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RND59_08340 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RND59_16035 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RND59_13400 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RND59_13405 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RND59_13410 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RND59_08350 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RND59_08355 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RND59_08360 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RND59_09265 ABC transporter substrate-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D RND59_09250 sugar ABC transporter permease K10193 togM; oligogalacturonide transport system permease protein
D RND59_09255 carbohydrate ABC transporter permease K10194 togN; oligogalacturonide transport system permease protein
D RND59_09260 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10195 togA; oligogalacturonide transport system ATP-binding protein
D RND59_16055 sugar ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D RND59_16050 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D RND59_16045 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D RND59_03975 mlaC; phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D RND59_03980 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RND59_03985 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RND59_03970 lipid asymmetry maintenance protein MlaB K07122 mlaB; phospholipid transport system transporter-binding protein
D RND59_03990 mlaF; phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RND59_16490 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D RND59_19640 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D RND59_00115 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RND59_03280 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D RND59_19635 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RND59_03285 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RND59_19630 rbsA; ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RND59_03290 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RND59_19625 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D RND59_06745 arabinose ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein
D RND59_06735 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein
D RND59_06740 araG; L-arabinose ABC transporter ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D RND59_05745 ytfQ; galactofuranose ABC transporter, galactofuranose-binding protein YtfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RND59_05755 ytfT; galactofuranose ABC transporter, ATP-binding protein YtfT K23509 ytfT; galactofuranose transport system permease protein
D RND59_05760 yjfF; galactofuranose ABC transporter, permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D RND59_05750 ytfR; galactofuranose ABC transporter, ATP-binding protein YtfR K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RND59_16430 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RND59_16435 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RND59_16440 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RND59_16445 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RND59_18355 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RND59_20505 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RND59_02455 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RND59_18360 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RND59_02440 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D RND59_18365 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RND59_02435 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RND59_18370 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RND59_02430 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RND59_17040 ABC transporter permease K10015 hisM; histidine transport system permease protein
D RND59_17045 hisQ; histidine ABC transporter permease HisQ K10016 hisQ; histidine transport system permease protein
D RND59_17035 hisP; histidine ABC transporter ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D RND59_17050 ABC transporter substrate-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D RND59_13920 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RND59_11490 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RND59_13925 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D RND59_11485 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D RND59_13930 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D RND59_11480 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D RND59_13935 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RND59_11475 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RND59_06130 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RND59_06135 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D RND59_06140 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D RND59_01475 MetQ/NlpA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D RND59_01470 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RND59_01465 metN; methionine ABC transporter ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D RND59_11275 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RND59_11270 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D RND59_11265 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D RND59_11260 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RND59_11255 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D RND59_14305 sapA; ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D RND59_14310 ABC transporter permease subunit K19227 sapB; cationic peptide transport system permease protein
D RND59_14315 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D RND59_14320 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein
D RND59_14325 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D RND59_19975 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D RND59_01925 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D RND59_19980 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D RND59_01920 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D RND59_19985 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D RND59_19990 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D RND59_01910 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D RND59_17920 Fe(3+) dicitrate ABC transporter substrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D RND59_17930 fecD; Fe(3+) dicitrate ABC transporter permease subunit FecD K23182 fecD; ferric citrate transport system permease protein
D RND59_17925 iron chelate uptake ABC transporter family permease subunit K23183 fecC; ferric citrate transport system permease protein
D RND59_17935 fecE; Fe(3+) dicitrate ABC transporter ATP-binding protein FecE K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D RND59_14965 fepB; Fe2+-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D RND59_14975 iron chelate uptake ABC transporter family permease subunit K23186 fepD; iron-siderophore transport system permease protein
D RND59_14980 fepG; iron-enterobactin ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D RND59_14985 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D RND59_09730 btuF; vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D RND59_12725 btuC; vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein
D RND59_12730 btuD; vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D RND59_11095 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D RND59_11085 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D RND59_11090 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RND59_19680 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D RND59_19670 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein
D RND59_19665 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D RND59_19675 metal ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D RND59_16705 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D RND59_16710 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D RND59_16700 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RND59_16695 ATP-binding cassette domain-containing protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RND59_05220 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D RND59_05215 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RND59_15350 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D RND59_15360 lolC; lipoprotein-releasing ABC transporter permease subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D RND59_15355 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RND59_03860 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D RND59_03855 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D RND59_04020 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RND59_07020 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RND59_07015 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RND59_15335 msbA; lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RND59_14680 ABC transporter transmembrane domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RND59_14685 ABC transporter transmembrane domain-containing protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RND59_18280 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D RND59_17730 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RND59_14470 cydC; cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RND59_14465 cydD; cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D RND59_20285 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D RND59_01930 cyclic peptide export ABC transporter K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D RND59_07975 cyclic peptide export ABC transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:vru02060]
D RND59_01325 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RND59_01320 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RND59_01330 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RND59_11655 ptsG; PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D RND59_15580 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RND59_17865 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D RND59_12060 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D RND59_01845 glucose PTS transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RND59_03925 beta-glucoside-specific PTS transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RND59_08965 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RND59_18230 ascF; PTS cellobiose/arbutin/salicin transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
D RND59_07570 alpha-glucoside-specific PTS transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D RND59_17800 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D RND59_18620 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D RND59_05640 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D RND59_06465 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D RND59_08900 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D RND59_18615 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D RND59_05655 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D RND59_06475 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D RND59_08890 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D RND59_18610 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D RND59_05650 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D RND59_05660 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D RND59_06480 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D RND59_08895 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D RND59_14900 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D RND59_01820 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D RND59_02095 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D RND59_14895 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D RND59_01800 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D RND59_02090 PTS ascorbate-specific subunit IIBC K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D RND59_14890 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D RND59_01805 PTS sugar transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D RND59_19550 fruB; fused PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D RND59_19205 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RND59_19540 fruA; PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RND59_19200 fructose PTS transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D RND59_02075 fructose PTS transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D RND59_19190 fructose PTS transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D RND59_19195 fructose PTS transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D RND59_19545 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RND59_02855 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D RND59_04045 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D RND59_02070 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RND59_04035 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:vru03070]
D RND59_03515 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D RND59_07320 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D RND59_07315 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D RND59_07330 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D RND59_07335 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D RND59_07340 gspH; type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D RND59_07345 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D RND59_07350 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D RND59_07355 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D RND59_07360 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D RND59_07365 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D RND59_07325 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RND59_02380 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RND59_02375 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RND59_07675 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RND59_03125 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RND59_04295 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RND59_02385 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RND59_06160 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RND59_09690 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RND59_07010 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RND59_04690 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RND59_09420 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RND59_06805 tatE; twin-arginine translocase subunit TatE K03116 tatA; sec-independent protein translocase protein TatA
D RND59_06810 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RND59_06815 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D RND59_15960 tssI; type VI secretion system tip protein TssI/VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D RND59_16835 tssI; type VI secretion system tip protein TssI/VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D RND59_17400 tssI; type VI secretion system tip protein TssI/VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D RND59_07145 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D RND59_08655 tssI; type VI secretion system tip protein TssI/VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D RND59_13325 tssI; type VI secretion system tip protein TssI/VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D RND59_06055 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D RND59_07150 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D RND59_18020 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D RND59_18055 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D RND59_18030 icmH; type IVB secretion system protein IcmH/DotU K11892 impK; type VI secretion system protein ImpK
D RND59_18035 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:vru02020]
D RND59_02460 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RND59_02465 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RND59_17305 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RND59_18355 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RND59_20505 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RND59_02455 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RND59_04985 envZ; two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RND59_04990 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RND59_04890 cpxA; envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D RND59_04885 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D RND59_12150 ATP-binding protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D RND59_09450 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RND59_19395 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D RND59_19390 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D RND59_17265 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RND59_17270 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D RND59_10530 flagellin K02406 fliC; flagellin
D RND59_10535 flagellin K02406 fliC; flagellin
D RND59_10820 flagellin K02406 fliC; flagellin
D RND59_10825 flagellin K02406 fliC; flagellin
D RND59_10830 flagellin K02406 fliC; flagellin
D RND59_11160 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RND59_01550 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D RND59_09775 arcB; aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D RND59_09780 arcA; two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D RND59_14050 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RND59_11450 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RND59_14045 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RND59_11445 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RND59_14040 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RND59_11440 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RND59_06125 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RND59_14000 sensor histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D RND59_15030 sensor histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D RND59_14005 response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D RND59_15020 response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D RND59_13990 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D RND59_13985 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D RND59_13980 citE; citrate (pro-3S)-lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RND59_13975 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D RND59_13970 citX; citrate lyase holo-[acyl-carrier protein] synthase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D RND59_13965 citG; triphosphoribosyl-dephospho-CoA synthase CitG K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D RND59_17440 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D RND59_11790 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D RND59_14430 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RND59_11815 2-hydroxycarboxylate transporter family protein K11616 maeN; malate:Na+ symporter
D RND59_00245 histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D RND59_00250 narL; two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RND59_00270 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D RND59_00265 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D RND59_00255 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D RND59_00260 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D RND59_04705 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RND59_11810 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RND59_04710 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RND59_11805 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RND59_04715 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D RND59_11800 frdC; fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C
D RND59_04720 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D RND59_11795 frdD; fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D
D RND59_03585 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D RND59_14350 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RND59_09335 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D RND59_10180 glnD; bifunctional uridylyltransferase/uridylyl-removing protein GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D RND59_10280 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D RND59_07265 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RND59_07260 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RND59_07270 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RND59_18835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_20535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_15540 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RND59_15545 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D RND59_04025 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D RND59_03420 pilin K02650 pilA; type IV pilus assembly protein PilA
D RND59_10470 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RND59_14140 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_14270 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_15290 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_15635 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_16065 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_16930 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17060 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17065 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17220 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17825 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18270 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18350 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18585 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18715 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18770 Cache 3/Cache 2 fusion domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_20245 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_20450 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_01635 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_02170 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_03530 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_05330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_05860 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_07415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_07465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_08960 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_09595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_10700 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_11820 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_13005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_13010 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_13615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_20485 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D RND59_01855 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D RND59_11190 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RND59_11195 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RND59_11175 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RND59_11165 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RND59_12010 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RND59_11180 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RND59_17165 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_10465 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_11695 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_12795 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_15780 autoinducer 2-binding periplasmic protein LuxP K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D RND59_15775 LuxQ periplasmic sensor domain-containing protein K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D RND59_19105 hybrid sensor histidine kinase/response regulator K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D RND59_15495 hybrid sensor histidine kinase/response regulator K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D RND59_15500 hybrid sensor histidine kinase/response regulator K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D RND59_01065 luxU; quorum-sensing phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D RND59_01070 luxO; quorum-sensing sigma-54 dependent transcriptional regulator LuxO K10912 luxO; two-component system, repressor protein LuxO
D RND59_03360 LuxR/HapR/OpaR family quorum-sensing transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D RND59_15570 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D RND59_15565 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D RND59_15560 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RND59_10855 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D RND59_10860 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D RND59_10865 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D RND59_04475 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RND59_08640 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D RND59_15210 cydA; cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RND59_15205 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RND59_15200 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D RND59_03515 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D RND59_05105 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein
D RND59_00990 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RND59_02930 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RND59_15920 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RND59_16015 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RND59_19470 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RND59_11925 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RND59_00185 glycoside hydrolase family 6 protein K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D RND59_12000 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D RND59_10455 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D RND59_17110 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:vru02024]
D RND59_09405 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RND59_15780 autoinducer 2-binding periplasmic protein LuxP K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D RND59_15775 LuxQ periplasmic sensor domain-containing protein K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D RND59_15490 acyl-homoserine-lactone synthase K13062 ainS; acyl homoserine lactone synthase [EC:2.3.1.184]
D RND59_15495 hybrid sensor histidine kinase/response regulator K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D RND59_15500 hybrid sensor histidine kinase/response regulator K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D RND59_19100 cqsA; alpha-hydroxyketone-type quorum-sensing autoinducer synthase K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D RND59_19105 hybrid sensor histidine kinase/response regulator K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D RND59_01065 luxU; quorum-sensing phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D RND59_01070 luxO; quorum-sensing sigma-54 dependent transcriptional regulator LuxO K10912 luxO; two-component system, repressor protein LuxO
D RND59_07820 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RND59_03360 LuxR/HapR/OpaR family quorum-sensing transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D RND59_04675 PadR family transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D RND59_14490 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RND59_14495 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RND59_10075 M23 family metallopeptidase K08642 lasA; LasA protease [EC:3.4.24.-]
D RND59_13900 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RND59_17550 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RND59_02750 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RND59_08010 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RND59_08000 isochorismatase family protein K20261 phzD; trans-2,3-dihydro-3-hydroxyanthranilic acid synthase [EC:3.3.2.15]
D RND59_07995 anthranilate synthase family protein K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86]
D RND59_17265 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RND59_17270 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D RND59_14725 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RND59_12960 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RND59_14730 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RND59_14735 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RND59_12945 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RND59_14740 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RND59_12940 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RND59_08420 asparagine synthetase B family protein K18316 cpmA; carbapenam-3-carboxylate synthase [EC:6.3.3.6]
D RND59_08415 enoyl-CoA hydratase/isomerase family protein K18317 cpmB; carboxymethylproline synthase [EC:2.3.1.226]
D RND59_08410 TauD/TfdA family dioxygenase K18315 cpmC; (5R)-carbapenem-3-carboxylate synthase [EC:1.14.20.3]
D RND59_08400 2Fe-2S iron-sulfur cluster binding domain-containing protein K18319 cpmE; carbapenem biosynthesis protein CpmE
D RND59_11745 polysaccharide lyase family 1 protein K01728 pel; pectate lyase [EC:4.2.2.2]
D RND59_00010 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RND59_04475 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RND59_07955 zur; zinc uptake transcriptional repressor Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D RND59_04515 glycoside hydrolase family 5 protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D RND59_14090 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RND59_10140 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RND59_11985 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RND59_11275 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RND59_11270 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D RND59_11265 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D RND59_11260 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RND59_11255 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D RND59_16620 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RND59_00450 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RND59_05785 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RND59_16625 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RND59_00445 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RND59_05780 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RND59_16630 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RND59_00440 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RND59_05775 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RND59_16635 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RND59_00435 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RND59_05790 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RND59_16640 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RND59_06160 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RND59_07675 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RND59_03125 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RND59_04295 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RND59_02385 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RND59_09690 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RND59_07010 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RND59_04690 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RND59_09420 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae [PATH:vru05111]
D RND59_09405 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RND59_15775 LuxQ periplasmic sensor domain-containing protein K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D RND59_15780 autoinducer 2-binding periplasmic protein LuxP K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D RND59_19100 cqsA; alpha-hydroxyketone-type quorum-sensing autoinducer synthase K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D RND59_19105 hybrid sensor histidine kinase/response regulator K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D RND59_01065 luxU; quorum-sensing phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D RND59_01070 luxO; quorum-sensing sigma-54 dependent transcriptional regulator LuxO K10912 luxO; two-component system, repressor protein LuxO
D RND59_07820 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RND59_04675 PadR family transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D RND59_00960 LysR family transcriptional regulator K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D RND59_02880 vpsR; cyclic-di-GMP-binding transcriptional regulator VpsR K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D RND59_04680 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RND59_03030 undecaprenyl-phosphate glucose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D RND59_03025 polysaccharide biosynthesis/export family protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D RND59_03020 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D RND59_03010 VanZ family protein K20950 vpsQ; polysaccharide biosynthesis protein VpsQ
D RND59_07315 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D RND59_07320 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D RND59_07325 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RND59_07330 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D RND59_07335 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D RND59_07340 gspH; type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D RND59_07345 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D RND59_07350 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D RND59_07355 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D RND59_07360 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D RND59_07365 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D RND59_07370 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D RND59_01245 transcriptional regulator K10921 toxR; cholera toxin transcriptional activator
D RND59_01250 regulatory protein ToxS K10922 toxS; transmembrane regulatory protein ToxS
D RND59_11735 porin K10940 ompT; outer membrane protein OmpT
D RND59_03160 porin K08720 ompU; outer membrane protein OmpU
D RND59_03360 LuxR/HapR/OpaR family quorum-sensing transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D RND59_16645 M4 family metallopeptidase K08604 hap; vibriolysin [EC:3.4.24.25]
D RND59_03585 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D RND59_14350 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RND59_09335 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D RND59_01330 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RND59_11655 ptsG; PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D RND59_06890 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D RND59_04475 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RND59_07515 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RND59_12120 diguanylate cyclase K20955 cdgK; diguanylate cyclase [EC:2.7.7.65]
D RND59_15985 GGDEF and EAL domain-containing protein K20962 cdgC; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D RND59_06975 EAL domain-containing protein K07181 cdgJ; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D RND59_03055 EAL domain-containing protein K20965 rocS; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D RND59_10855 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D RND59_04025 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D RND59_09205 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D RND59_10860 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D RND59_10865 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D RND59_11160 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:vru02030]
D RND59_14140 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_14270 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_15290 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_15635 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_16065 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_16930 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17060 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17065 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17220 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17825 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18270 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18350 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18585 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18715 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18770 Cache 3/Cache 2 fusion domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_20245 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_20450 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_01635 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_02170 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_03530 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_05330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_05860 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_07415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_07465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_08960 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_09595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_10700 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_11820 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_13005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_13010 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_13615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_20485 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D RND59_01855 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D RND59_12860 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D RND59_16490 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D RND59_19640 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D RND59_00115 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RND59_03280 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D RND59_11175 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RND59_11190 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RND59_11195 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RND59_11165 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RND59_12010 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RND59_12015 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D RND59_11170 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D RND59_07950 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D RND59_11180 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RND59_17165 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_10465 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_11695 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_12795 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_10470 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RND59_10880 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RND59_10910 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RND59_10915 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RND59_01550 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D RND59_01545 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:vru02040]
D RND59_10870 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RND59_10875 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RND59_10880 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RND59_10885 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RND59_10890 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RND59_10895 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D RND59_07040 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RND59_10905 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RND59_10910 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RND59_10915 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RND59_10920 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D RND59_10930 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RND59_10935 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RND59_11145 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RND59_10940 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RND59_10460 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RND59_10475 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RND59_10480 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RND59_10485 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RND59_10490 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RND59_10495 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RND59_10500 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RND59_10505 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RND59_10510 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RND59_10515 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D RND59_10520 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RND59_10525 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RND59_10440 FlgO family outer membrane protein K24344 flgO; flagellar H-ring protein FlgO
D RND59_10445 flgP; flagellar assembly lipoprotein FlgP K09860 flgP; outer membrane protein FlgP
D RND59_10435 flagellar assembly protein FlgT K24343 flgT; flagellar H-ring protein FlgT
D RND59_04415 tetratricopeptide repeat protein K21217 motX; sodium-type polar flagellar protein MotX
D RND59_01160 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D RND59_10530 flagellin K02406 fliC; flagellin
D RND59_10535 flagellin K02406 fliC; flagellin
D RND59_10820 flagellin K02406 fliC; flagellin
D RND59_10825 flagellin K02406 fliC; flagellin
D RND59_10830 flagellin K02406 fliC; flagellin
D RND59_10840 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D RND59_10850 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D RND59_01550 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D RND59_01545 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RND59_10455 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RND59_10450 flgN; flagellar export chaperone FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D RND59_09120 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RND59_10855 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D RND59_04025 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D RND59_10865 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D RND59_11160 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RND59_03560 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D RND59_08140 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:vru01501]
D RND59_03160 porin K08720 ompU; outer membrane protein OmpU
D RND59_10000 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RND59_02765 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RND59_11275 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RND59_11270 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D RND59_11265 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D RND59_11260 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RND59_11255 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D RND59_05835 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_11345 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_11975 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_05840 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RND59_11350 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RND59_11980 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RND59_11985 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RND59_02135 ATP-binding protein K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RND59_02140 response regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RND59_02145 efflux RND transporter periplasmic adaptor subunit K18145 adeA; membrane fusion protein, multidrug efflux system
D RND59_02150 multidrug efflux RND transporter permease subunit K18146 adeB; multidrug efflux pump
D RND59_03515 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D RND59_04625 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RND59_01395 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RND59_09625 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RND59_13545 MBL fold metallo-hydrolase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:vru01502]
D RND59_20070 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RND59_11955 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RND59_09635 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RND59_09640 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RND59_09655 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:vru01503]
D RND59_16690 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RND59_17540 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RND59_14305 sapA; ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D RND59_14310 ABC transporter permease subunit K19227 sapB; cationic peptide transport system permease protein
D RND59_14315 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D RND59_14320 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein
D RND59_14325 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D RND59_04890 cpxA; envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D RND59_04885 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D RND59_07805 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RND59_18335 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS
D RND59_09450 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RND59_05995 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D RND59_10005 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RND59_05835 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_11345 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_11975 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_05840 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RND59_11350 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RND59_11980 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RND59_03515 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D RND59_10250 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:vru01000]
C 01001 Protein kinases [BR:vru01001]
D RND59_02050 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RND59_08760 ATP-binding protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D RND59_03020 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D RND59_02460 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RND59_04985 envZ; two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RND59_12150 ATP-binding protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D RND59_04890 cpxA; envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D RND59_17265 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RND59_09775 arcB; aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D RND59_02135 ATP-binding protein K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RND59_00245 histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D RND59_03585 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D RND59_14000 sensor histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D RND59_15030 sensor histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D RND59_14035 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D RND59_11785 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D RND59_02755 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D RND59_07265 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RND59_15540 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RND59_19055 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RND59_12020 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RND59_11175 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RND59_15775 LuxQ periplasmic sensor domain-containing protein K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D RND59_19105 hybrid sensor histidine kinase/response regulator K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D RND59_15495 hybrid sensor histidine kinase/response regulator K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D RND59_15500 hybrid sensor histidine kinase/response regulator K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D RND59_10860 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:vru01009]
D RND59_01795 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_04865 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_01240 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RND59_14025 HAD-IB family phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RND59_09875 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:vru01002]
D RND59_02800 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RND59_03435 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RND59_08230 hycI; hydrogenase maturation peptidase HycI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D RND59_02260 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RND59_16385 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D RND59_01175 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RND59_09750 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RND59_09760 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RND59_08880 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RND59_01220 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RND59_09990 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D RND59_18335 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS
D RND59_13860 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RND59_05720 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D RND59_16645 M4 family metallopeptidase K08604 hap; vibriolysin [EC:3.4.24.25]
D RND59_16365 immune inhibitor A K09607 ina; immune inhibitor A [EC:3.4.24.-]
D RND59_09395 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RND59_03865 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RND59_02320 pepB; aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D RND59_13080 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RND59_10755 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RND59_16910 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D RND59_10100 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RND59_19360 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D RND59_10075 M23 family metallopeptidase K08642 lasA; LasA protease [EC:3.4.24.-]
D RND59_18385 peptidoglycan DD-metalloendopeptidase family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D RND59_10185 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RND59_06415 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RND59_04870 M28 family metallopeptidase K05994 E3.4.11.10; bacterial leucyl aminopeptidase [EC:3.4.11.10]
D RND59_13520 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D RND59_17115 M35 family metallo-endopeptidase K08646 MEP; peptidyl-Lys metalloendopeptidase [EC:3.4.24.20]
D RND59_03140 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RND59_12270 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RND59_10690 M48 family metallopeptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D RND59_10225 rseP; sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RND59_09450 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RND59_09445 degS; outer membrane-stress sensor serine endopeptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D RND59_01410 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RND59_03165 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RND59_15530 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RND59_15550 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RND59_15520 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RND59_13810 Lon protease family protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D RND59_07065 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RND59_16460 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RND59_03615 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RND59_13870 prc; carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RND59_19570 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RND59_00050 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D RND59_11705 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D RND59_07035 glpG; rhomboid family intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D RND59_04800 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RND59_04425 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RND59_11470 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RND59_05695 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RND59_19350 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D RND59_02475 yegQ; tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D RND59_03065 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D RND59_03060 peptidase U32 family protein K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D RND59_04070 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein
D RND59_08330 tldD; metalloprotease TldD K03568 tldD; TldD protein
D RND59_15685 alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin
D RND59_07835 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D RND59_11515 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D RND59_07830 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
D RND59_11520 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:vru01003]
D RND59_12410 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D RND59_15680 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RND59_03220 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D RND59_04625 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:vru01005]
D RND59_10250 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RND59_10255 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RND59_09680 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RND59_10240 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RND59_15240 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RND59_15330 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RND59_05345 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RND59_05350 lpxM; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D RND59_05270 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RND59_16690 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RND59_17540 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RND59_05280 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D RND59_10655 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RND59_15320 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RND59_04005 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RND59_04000 kdsD; arabinose-5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RND59_05290 glycosyltransferase family 2 protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D RND59_05250 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RND59_05260 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D RND59_05285 glycosyltransferase family 9 protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D RND59_05060 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RND59_10330 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RND59_01460 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RND59_03520 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D RND59_05235 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D RND59_12460 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D RND59_05140 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:vru01011]
D RND59_03960 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RND59_07635 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RND59_09660 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RND59_09645 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RND59_09630 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RND59_20070 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RND59_11955 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RND59_07200 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RND59_09640 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RND59_09655 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RND59_09165 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RND59_03770 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RND59_02815 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RND59_04625 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RND59_03220 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D RND59_15680 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RND59_01395 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RND59_09625 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RND59_01410 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RND59_03165 dacB; serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RND59_18335 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS
D RND59_18385 peptidoglycan DD-metalloendopeptidase family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D RND59_02730 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RND59_09970 mltA; murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D RND59_15710 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D RND59_08620 mltC; membrane-bound lytic murein transglycosylase MltC K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D RND59_10290 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D RND59_01660 mltF; membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D RND59_11635 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RND59_01405 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RND59_07805 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RND59_03405 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D RND59_18340 Lpp/OprI family alanine-zipper lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:vru01004]
D RND59_11610 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RND59_11355 ketoacyl-ACP synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RND59_11365 3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RND59_11385 ketoacyl-ACP synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RND59_11605 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RND59_12525 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RND59_10980 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RND59_11625 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RND59_11615 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RND59_13815 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D RND59_10245 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RND59_14655 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D RND59_15980 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D RND59_15975 tesA; multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RND59_00355 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D RND59_14535 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D RND59_07545 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RND59_13225 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RND59_17255 AMP-binding protein K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RND59_00010 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RND59_07055 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D RND59_11600 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RND59_09150 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RND59_03955 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:vru01008]
D RND59_08025 amino acid adenylation domain-containing protein K16416 mxaA; myxalamid-type nonribosomal peptide synthetase MxaA
D RND59_14995 MbtH family protein K05375 mbtH; MbtH protein
D RND59_19565 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein
D RND59_06950 MbtH family protein K05375 mbtH; MbtH protein
D RND59_14960 isochorismatase family protein K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D RND59_06945 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D RND59_14955 (2,3-dihydroxybenzoyl)adenylate synthase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D RND59_14990 amino acid adenylation domain-containing protein K24101 vabF; L-arginine---[L-arginyl-carrier protein] ligase [EC:6.2.1.63]
C 01006 Prenyltransferases [BR:vru01006]
D RND59_01560 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RND59_08505 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RND59_10210 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RND59_07815 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RND59_04790 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RND59_07050 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RND59_17665 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:vru01007]
D RND59_10390 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RND59_01210 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RND59_03240 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RND59_03170 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RND59_04570 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RND59_15230 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RND59_11125 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RND59_01015 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RND59_02805 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RND59_03875 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RND59_01370 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RND59_02885 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RND59_12495 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RND59_13035 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RND59_02295 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RND59_06075 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RND59_06080 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RND59_12145 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RND59_01615 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RND59_19850 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RND59_09325 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RND59_12560 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RND59_12565 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RND59_06085 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D RND59_00430 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RND59_16920 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RND59_13030 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RND59_04120 pyridoxal phosphate-dependent aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D RND59_12315 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RND59_20475 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RND59_12215 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RND59_04490 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RND59_03740 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RND59_14155 pyridoxal phosphate-dependent class III aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RND59_17245 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RND59_12205 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RND59_03185 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RND59_11970 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RND59_17005 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RND59_06020 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RND59_08170 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RND59_14600 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RND59_19355 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:vru00194]
D RND59_06270 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RND59_06265 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RND59_06260 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RND59_06255 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RND59_06250 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RND59_06245 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RND59_06240 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RND59_06235 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RND59_06230 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:vru03000]
D RND59_06770 araC; arabinose operon transcriptional regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D RND59_20205 melR; transcriptional regulator MelR K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D RND59_00170 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D RND59_01830 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D RND59_18530 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RND59_17030 helix-turn-helix domain-containing protein K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D RND59_13075 GlxA family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D RND59_01530 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RND59_11465 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RND59_05855 ilvY; HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D RND59_14555 metR; HTH-type transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D RND59_02830 nhaR; transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D RND59_07470 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D RND59_02415 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RND59_04630 oxyR; DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RND59_03760 leuO; transcriptional regulator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D RND59_00960 LysR family transcriptional regulator K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D RND59_15445 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D RND59_17130 LysR substrate-binding domain-containing protein K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D RND59_06490 LysR substrate-binding domain-containing protein K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D RND59_11495 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D RND59_17810 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D RND59_16420 DeoR/GlpR family DNA-binding transcription regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D RND59_11765 DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D RND59_02085 ulaR; HTH-type transcriptional regulator UlaR K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D RND59_16060 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RND59_17970 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RND59_19455 DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RND59_19650 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RND59_09915 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RND59_13390 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RND59_04810 cytR; DNA-binding transcriptional regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D RND59_19555 cra; catabolite repressor/activator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D RND59_12065 LacI family DNA-binding transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D RND59_12420 purR; HTH-type transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D RND59_18240 substrate-binding domain-containing protein K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D RND59_17870 GntR family transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D RND59_07575 GntR family transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D RND59_00860 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D RND59_08885 GntR family transcriptional regulator K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D RND59_10720 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RND59_15420 fadR; fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D RND59_03380 pdhR; pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RND59_01150 FCD domain-containing protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D RND59_08465 FCD domain-containing protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D RND59_08990 FadR/GntR family transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D RND59_02215 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RND59_03745 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RND59_06410 betI; transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D RND59_05340 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D RND59_03360 LuxR/HapR/OpaR family quorum-sensing transcriptional regulator K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D RND59_07080 fabR; HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D RND59_06425 asnC; transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D RND59_15440 lrp; leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RND59_16985 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RND59_19690 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RND59_17325 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RND59_00360 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D RND59_12840 malT; HTH-type transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D RND59_17845 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D RND59_17620 MarR family transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D RND59_16150 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RND59_17085 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RND59_01295 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RND59_16680 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RND59_11725 zntR; Zn(2+)-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D RND59_02165 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D RND59_18325 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RND59_10995 fcrX; ferric iron uptake transcriptional regulator FcrX K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RND59_07955 zur; zinc uptake transcriptional repressor Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D RND59_09305 kdgR; DNA-binding transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D RND59_03265 IclR family transcriptional regulator K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
D RND59_03300 IclR family transcriptional regulator K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
D RND59_04475 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RND59_13700 FNR family transcription factor K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RND59_02360 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RND59_13465 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RND59_02825 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D RND59_04675 PadR family transcriptional regulator K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D RND59_14640 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D RND59_07640 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RND59_07515 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RND59_02725 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D RND59_05605 helix-turn-helix domain-containing protein K07724 ner; Ner family transcriptional regulator
D RND59_20050 SgrR family transcriptional regulator K11925 sgrR; SgrR family transcriptional regulator
D RND59_18145 type II toxin-antitoxin system MqsA family antitoxin K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D RND59_10855 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D RND59_02880 vpsR; cyclic-di-GMP-binding transcriptional regulator VpsR K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D RND59_16410 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D RND59_18040 sigma 54-interacting transcriptional regulator K11908 vasH; sigma-54 dependent transcriptional regulator
D RND59_16840 norR; nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D RND59_16900 norR; nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D RND59_08245 sigma 54-interacting transcriptional regulator K15836 fhlA; formate hydrogenlyase transcriptional activator
D RND59_04835 metJ; met regulon transcriptional regulator MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D RND59_17770 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RND59_01850 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D RND59_03930 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D RND59_18625 PRD domain-containing protein K03491 licR; probable licABCH operon transcriptional regulator
D RND59_10020 bolA; transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D RND59_17715 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RND59_06225 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RND59_01225 rfaH; transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH
D RND59_08495 argR; transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism
D RND59_15595 ROK family protein K02565 nagC; N-acetylglucosamine repressor
D RND59_01215 ROK family protein K02565 nagC; N-acetylglucosamine repressor
D RND59_11690 ROK family protein K15545 mlc; transcriptional regulator of PTS gene
D RND59_17790 MltR family transcriptional regulator K02562 mtlR; mannitol operon repressor
D RND59_13195 tyrR; transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D RND59_14300 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D RND59_14285 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D RND59_08815 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D RND59_03235 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D RND59_10135 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D RND59_10120 crl; sigma factor-binding protein Crl K11926 crl; sigma factor-binding protein Crl
C 03021 Transcription machinery [BR:vru03021]
D RND59_04270 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RND59_07705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RND59_07710 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RND59_04950 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RND59_09120 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RND59_09205 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D RND59_03640 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RND59_07025 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D RND59_04025 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D RND59_11160 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RND59_03905 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D RND59_03105 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RND59_10160 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RND59_07680 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RND59_09475 sspA; stringent starvation protein SspA K03599 sspA; stringent starvation protein A
D RND59_09480 sspB; ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D RND59_08760 ATP-binding protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D RND59_08755 RsbS, negative regulator of sigma-B K17762 rsbS; rsbT antagonist protein RsbS
D RND59_08750 protoglobin domain-containing protein K17763 rsbR; rsbT co-antagonist protein RsbR
D RND59_03635 RseA family anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA
D RND59_03630 rseB; sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D RND59_03625 SoxR reducing system RseC family protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D RND59_03235 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D RND59_03155 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RND59_07410 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D RND59_07600 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:vru03019]
D RND59_11575 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RND59_08315 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D RND59_03610 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RND59_04410 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RND59_07765 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RND59_07590 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D RND59_20410 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RND59_20490 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RND59_05680 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RND59_03560 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RND59_03080 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RND59_07600 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RND59_01795 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_04865 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RND59_01715 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RND59_04750 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RND59_07820 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RND59_02445 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RND59_03245 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RND59_02860 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RND59_09335 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D RND59_08290 csrD; RNase E specificity factor CsrD K18765 csrD; RNase E specificity factor CsrD
D RND59_04785 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D RND59_09790 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase K02553 rraA; regulator of ribonuclease activity A
D RND59_08335 rraB; ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B
D RND59_04040 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D RND59_13305 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D RND59_03225 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:vru03011]
D RND59_15480 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RND59_10190 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RND59_04365 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RND59_04275 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RND59_04310 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RND59_07910 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RND59_07885 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RND59_04325 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RND59_09470 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RND59_04400 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RND59_04280 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RND59_07880 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RND59_04285 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RND59_04330 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RND59_03085 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RND59_09425 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RND59_04350 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RND59_07920 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RND59_04375 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RND59_02820 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RND59_09135 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RND59_07690 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RND59_04380 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RND59_04395 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RND59_04390 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RND59_04335 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RND59_04320 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RND59_07925 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RND59_07695 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RND59_07685 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RND59_07700 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RND59_09465 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RND59_04345 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RND59_04300 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RND59_04360 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RND59_04265 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RND59_04315 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RND59_09440 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RND59_19865 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RND59_08510 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RND59_04370 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RND59_04385 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RND59_04340 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RND59_08515 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RND59_05320 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RND59_04355 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RND59_04305 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RND59_04820 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RND59_11595 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RND59_05315 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RND59_06145 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RND59_19860 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RND59_04290 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RND59_14230 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:vru03009]
D RND59_03610 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RND59_07765 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RND59_03605 era; GTPase Era K03595 era; GTPase
D RND59_08520 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D RND59_03235 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D RND59_03105 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RND59_10160 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RND59_07680 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RND59_14220 rsuA; 16S rRNA pseudouridine(516) synthase RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D RND59_08550 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RND59_05955 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RND59_03195 rsmC; 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D RND59_07005 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RND59_08825 rsmE; 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RND59_13885 rsmF; 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D RND59_06215 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RND59_09615 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RND59_09505 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RND59_06430 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D RND59_00085 rlmA; 23S rRNA (guanine(745)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D RND59_04405 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RND59_03145 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RND59_11405 rlmF; 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D RND59_10015 methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D RND59_01390 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RND59_13955 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RND59_14255 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RND59_05725 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D RND59_13835 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D RND59_01515 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D RND59_02310 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RND59_03580 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RND59_14260 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RND59_03895 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RND59_14475 rluB; 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RND59_11580 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RND59_02675 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RND59_12345 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D RND59_03035 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RND59_13200 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D RND59_10090 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D RND59_18435 GNAT family protein K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D RND59_09430 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D RND59_13280 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RND59_07525 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RND59_10950 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D RND59_11575 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RND59_08315 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D RND59_08810 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RND59_20415 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D RND59_20490 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RND59_02905 srmB; ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D RND59_07760 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RND59_02280 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D RND59_20520 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D RND59_07825 hflX; ribosome rescue GTPase HflX K03665 hflX; GTPase
D RND59_05915 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RND59_07485 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RND59_04955 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RND59_03095 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D RND59_03110 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D RND59_01865 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D RND59_01385 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D RND59_01350 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D RND59_03150 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D RND59_13910 YibL family ribosome-associated protein K14762 yibL; ribosome-associated protein
D RND59_04075 yjgA; ribosome biogenesis factor YjgA K09889 yjgA; ribosome-associated protein
D RND59_13820 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D RND59_04030 hpf; ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor
D RND59_02685 raiA; ribosome-associated translation inhibitor RaiA K05809 raiA; ribosome-associated inhibitor A
D RND59_10605 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D RND59_11590 yceD; 23S rRNA accumulation protein YceD K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:vru03016]
D RND59_15050 hypothetical protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D RND59_10390 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RND59_01615 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RND59_02805 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RND59_01370 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RND59_01015 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RND59_01210 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RND59_11125 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RND59_02885 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RND59_12495 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RND59_09325 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RND59_13035 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RND59_19850 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RND59_12145 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RND59_15230 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RND59_03875 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RND59_02295 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RND59_12560 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RND59_12565 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RND59_03170 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RND59_04570 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RND59_07285 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RND59_15410 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RND59_08635 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RND59_01610 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D RND59_01200 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RND59_03090 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RND59_09185 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D RND59_02355 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RND59_05915 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RND59_07485 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RND59_07815 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RND59_06165 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RND59_06210 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RND59_14785 hypothetical protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RND59_07375 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RND59_06150 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RND59_01165 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D RND59_05360 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RND59_20495 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D RND59_00005 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RND59_00675 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D RND59_02735 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D RND59_06075 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RND59_06080 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RND59_03240 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RND59_10665 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D RND59_01670 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RND59_08040 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D RND59_07520 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RND59_12125 dusC; tRNA dihydrouridine(16) synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D RND59_01340 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RND59_12485 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D RND59_12480 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D RND59_12430 cmoM; tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D RND59_07190 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D RND59_09435 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RND59_02365 trmJ; tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D RND59_04895 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RND59_02900 methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D RND59_01570 truC; tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D RND59_14260 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RND59_03895 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RND59_12285 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RND59_13690 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RND59_06040 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RND59_07875 tusB; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D RND59_07870 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D RND59_07865 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D RND59_13945 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D RND59_02345 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D RND59_03660 ygfZ; tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D RND59_15455 tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D RND59_10975 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D RND59_02395 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RND59_13245 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RND59_13130 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RND59_13240 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RND59_01490 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RND59_06640 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RND59_07795 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D RND59_02390 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RND59_01535 thiI; tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D RND59_10275 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RND59_17720 GNAT family N-acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D RND59_00030 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RND59_09140 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RND59_07800 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RND59_09975 tcdA; tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D RND59_04410 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RND59_03080 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:vru03012]
D RND59_20085 yciH; stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1
D RND59_03100 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RND59_19855 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RND59_04450 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RND59_10195 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RND59_07670 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RND59_07895 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RND59_07890 fusA; elongation factor G K02355 fusA; elongation factor G
D RND59_09890 fusA; elongation factor G K02355 fusA; elongation factor G
D RND59_10635 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RND59_10205 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D RND59_10640 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RND59_10610 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RND59_12370 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RND59_14370 yeiP; elongation factor P-like protein YeiP K02356 efp; elongation factor P
D RND59_04730 efp; elongation factor P K02356 efp; elongation factor P
D RND59_04700 epmA; elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D RND59_04735 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D RND59_10960 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D RND59_02890 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D RND59_02910 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D RND59_16890 ribosome alternative rescue factor ArfA K09890 arfA; alternative ribosome-rescue factor
D RND59_18205 arfB; alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:vru03110]
D RND59_12365 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D RND59_02665 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RND59_15525 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RND59_04795 hslU; HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RND59_01240 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RND59_01715 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RND59_02335 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D RND59_04750 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RND59_01710 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RND59_08570 djlA; co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein
D RND59_02340 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D RND59_07305 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D RND59_01730 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RND59_10415 Hsp20 family protein K13993 HSP20; HSP20 family protein
D RND59_06105 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA
D RND59_07310 hslR; ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D RND59_04755 co-chaperone GroES K04078 groES; chaperonin GroES
D RND59_09450 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RND59_03140 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RND59_06235 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RND59_04690 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RND59_04880 Spy/CpxP family protein refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy
D RND59_10805 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D RND59_08280 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RND59_08285 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D RND59_10005 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RND59_15235 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RND59_15510 ppiD; peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D RND59_07855 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D RND59_04255 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D RND59_02795 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D RND59_04430 slyD; peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D RND59_17155 ppiC; peptidylprolyl isomerase PpiC K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RND59_08560 surA; peptidylprolyl isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D RND59_07595 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D RND59_17075 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D RND59_01290 co-chaperone YbbN K05838 ybbN; putative thioredoxin
D RND59_14645 GrxA family glutaredoxin K03674 grxA; glutaredoxin 1
D RND59_11225 Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D RND59_05995 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D RND59_15430 dsbB; disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D RND59_03390 dsbC; bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D RND59_04915 protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:vru04131]
D RND59_02315 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RND59_06065 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RND59_19995 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RND59_00075 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RND59_08870 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RND59_11685 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RND59_01240 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:vru03051]
D RND59_01240 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:vru03032]
D RND59_10305 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RND59_05010 hupA; nucleoid-associated protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D RND59_15515 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RND59_12570 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D RND59_15475 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D RND59_06125 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RND59_07935 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RND59_09125 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RND59_08145 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RND59_10265 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RND59_06120 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RND59_03870 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RND59_01380 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RND59_11645 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RND59_14060 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_19075 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_07550 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_10310 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_13380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_00945 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RND59_03040 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D RND59_10260 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RND59_06840 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RND59_01300 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RND59_04585 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RND59_11010 seqA; replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D RND59_06110 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RND59_03485 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RND59_03490 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RND59_12400 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RND59_11230 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:vru03036]
D RND59_03610 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RND59_12295 H-NS family nucleoid-associated regulatory protein K03746 hns; DNA-binding protein H-NS
D RND59_05010 hupA; nucleoid-associated protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D RND59_15515 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RND59_12570 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D RND59_15475 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D RND59_06125 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RND59_09490 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein
D RND59_06980 Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D RND59_07515 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RND59_07820 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RND59_15440 lrp; leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RND59_16985 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RND59_19690 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RND59_17325 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RND59_11550 yejK; nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein
D RND59_12445 mukB; chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB
D RND59_12440 mukE; chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE
D RND59_12435 mukF; chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF
D RND59_09670 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RND59_09170 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D RND59_07015 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RND59_09625 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RND59_15435 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RND59_09620 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D RND59_09665 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D RND59_09650 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RND59_07020 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RND59_09675 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RND59_01305 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D RND59_03690 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D RND59_04855 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB
D RND59_13840 cell division protein ZapC K18657 zapC; cell division protein ZapC
D RND59_03445 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD
D RND59_09460 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D RND59_04250 LysM-like peptidoglycan-binding domain-containing protein K07269 ytfB; cell division protein YtfB
D RND59_07805 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RND59_05835 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_11345 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_11975 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_15720 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RND59_15725 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RND59_15730 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RND59_14415 hypothetical protein K13053 sulA; cell division inhibitor SulA
D RND59_05340 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D RND59_11010 seqA; replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D RND59_08295 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RND59_08300 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RND59_08305 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D RND59_01400 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D RND59_17710 AAA family ATPase K03496 parA; chromosome partitioning protein
D RND59_06220 ParA family protein K03496 parA; chromosome partitioning protein
D RND59_11185 ParA family protein K03496 parA; chromosome partitioning protein
D RND59_17715 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RND59_06225 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RND59_03485 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RND59_03490 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RND59_06210 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RND59_06215 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RND59_06920 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D RND59_03395 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RND59_01010 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RND59_06845 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:vru03400]
D RND59_15615 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RND59_18330 phrB; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RND59_09820 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RND59_08630 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RND59_01135 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RND59_17190 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RND59_09695 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RND59_18530 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RND59_17510 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RND59_05305 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RND59_15280 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RND59_09815 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RND59_03385 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RND59_01300 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RND59_06840 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RND59_08160 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RND59_01075 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RND59_14345 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RND59_05710 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RND59_07705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RND59_07710 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RND59_04270 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RND59_04950 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RND59_15370 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RND59_09225 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RND59_07810 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RND59_02865 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D RND59_12600 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D RND59_02270 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RND59_01555 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RND59_10265 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RND59_06120 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RND59_03870 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RND59_01380 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RND59_11645 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RND59_14060 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_19075 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_07550 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_10310 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_13380 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RND59_00945 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RND59_03040 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D RND59_08145 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RND59_04585 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RND59_09950 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D RND59_09945 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D RND59_09955 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RND59_09315 recA; recombinase RecA K03553 recA; recombination protein RecA
D RND59_15220 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RND59_15215 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RND59_15225 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RND59_04815 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RND59_07915 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D RND59_15270 primosomal replication protein K04067 priC; primosomal replication protein N''
D RND59_19165 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D RND59_19170 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D RND59_09885 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RND59_06115 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RND59_04960 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RND59_03600 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RND59_00935 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D RND59_01740 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RND59_02470 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D RND59_14225 DEAD/DEAH box helicase K19789 radD; DNA repair protein RadD
D RND59_06110 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RND59_12400 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RND59_05010 hupA; nucleoid-associated protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D RND59_15515 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RND59_07515 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RND59_12570 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D RND59_15475 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D RND59_05680 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RND59_12295 H-NS family nucleoid-associated regulatory protein K03746 hns; DNA-binding protein H-NS
D RND59_10080 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RND59_07065 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RND59_14360 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D RND59_09320 recX; recombination regulator RecX K03565 recX; regulatory protein
D RND59_05830 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D RND59_15745 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D RND59_15260 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RND59_00035 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RND59_14110 nrdA; class 1a ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RND59_14115 nrdB; class Ia ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:vru03029]
D RND59_03100 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RND59_19855 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RND59_10195 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RND59_07670 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RND59_07895 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RND59_07890 fusA; elongation factor G K02355 fusA; elongation factor G
D RND59_09890 fusA; elongation factor G K02355 fusA; elongation factor G
D RND59_03605 era; GTPase Era K03595 era; GTPase
D RND59_03170 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RND59_01370 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RND59_12495 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RND59_11125 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RND59_19040 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RND59_08145 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RND59_10230 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D RND59_01715 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RND59_01730 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RND59_04750 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RND59_04755 co-chaperone GroES K04078 groES; chaperonin GroES
D RND59_01710 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RND59_02355 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RND59_02340 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D RND59_11225 Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D RND59_01010 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RND59_17665 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RND59_06160 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RND59_01240 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:vru02000]
D RND59_15335 msbA; lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RND59_14680 ABC transporter transmembrane domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RND59_14685 ABC transporter transmembrane domain-containing protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RND59_18280 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D RND59_07160 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RND59_17730 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RND59_14470 cydC; cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RND59_14465 cydD; cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D RND59_20285 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D RND59_07975 cyclic peptide export ABC transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D RND59_01930 cyclic peptide export ABC transporter K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D RND59_13830 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D RND59_20230 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RND59_20225 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D RND59_20220 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RND59_04745 ATP-binding cassette domain-containing protein K05776 modF; molybdate transport system ATP-binding protein
D RND59_04090 thiB; thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D RND59_04085 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein
D RND59_04080 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D RND59_13660 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RND59_02695 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RND59_13665 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D RND59_13670 potB; spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein
D RND59_13675 potA; spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RND59_14725 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RND59_12960 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RND59_14730 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RND59_14735 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RND59_12945 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RND59_14740 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RND59_12940 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RND59_17470 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RND59_06395 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RND59_17465 proW; glycine betaine/L-proline ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein
D RND59_06390 choW; choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D RND59_17460 proV; glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RND59_06385 choV; choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RND59_12860 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D RND59_12865 malF; maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein
D RND59_12870 malG; maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein
D RND59_12855 malK; maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RND59_13395 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RND59_08340 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RND59_16035 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RND59_13400 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RND59_13405 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RND59_13410 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RND59_08350 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RND59_08355 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RND59_08360 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RND59_16055 sugar ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D RND59_16050 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D RND59_16045 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D RND59_06745 arabinose ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein
D RND59_06735 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein
D RND59_06740 araG; L-arabinose ABC transporter ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D RND59_09265 ABC transporter substrate-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D RND59_09250 sugar ABC transporter permease K10193 togM; oligogalacturonide transport system permease protein
D RND59_09255 carbohydrate ABC transporter permease K10194 togN; oligogalacturonide transport system permease protein
D RND59_09260 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10195 togA; oligogalacturonide transport system ATP-binding protein
D RND59_16490 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D RND59_19640 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D RND59_00115 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RND59_03280 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D RND59_19635 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RND59_03285 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RND59_19630 rbsA; ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RND59_03290 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RND59_05745 ytfQ; galactofuranose ABC transporter, galactofuranose-binding protein YtfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RND59_05755 ytfT; galactofuranose ABC transporter, ATP-binding protein YtfT K23509 ytfT; galactofuranose transport system permease protein
D RND59_05760 yjfF; galactofuranose ABC transporter, permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D RND59_05750 ytfR; galactofuranose ABC transporter, ATP-binding protein YtfR K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RND59_16430 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RND59_16435 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RND59_16440 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RND59_16445 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RND59_14335 ABC transporter permease K02069 STAR2; UDP-glucose/iron transport system permease protein
D RND59_03980 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RND59_03985 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RND59_03990 mlaF; phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RND59_03975 mlaC; phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D RND59_03970 lipid asymmetry maintenance protein MlaB K07122 mlaB; phospholipid transport system transporter-binding protein
D RND59_18355 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RND59_20505 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RND59_02455 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RND59_18360 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RND59_02440 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D RND59_18365 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RND59_02435 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RND59_18370 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RND59_02430 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RND59_17040 ABC transporter permease K10015 hisM; histidine transport system permease protein
D RND59_17045 hisQ; histidine ABC transporter permease HisQ K10016 hisQ; histidine transport system permease protein
D RND59_17035 hisP; histidine ABC transporter ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D RND59_17050 ABC transporter substrate-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D RND59_13920 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RND59_11490 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RND59_13925 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D RND59_11485 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D RND59_13930 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D RND59_11480 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D RND59_13935 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RND59_11475 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RND59_01475 MetQ/NlpA family lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D RND59_01470 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RND59_01465 metN; methionine ABC transporter ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D RND59_12100 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D RND59_12105 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D RND59_12110 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D RND59_06130 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RND59_06135 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D RND59_06140 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D RND59_14570 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RND59_14910 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RND59_15555 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RND59_15630 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RND59_16325 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RND59_19315 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RND59_14565 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RND59_14920 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RND59_19320 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RND59_19325 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RND59_14560 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RND59_14925 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RND59_19330 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RND59_11275 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RND59_11270 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D RND59_11265 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D RND59_11260 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RND59_11255 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D RND59_14305 sapA; ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D RND59_14310 ABC transporter permease subunit K19227 sapB; cationic peptide transport system permease protein
D RND59_14315 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D RND59_14320 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein
D RND59_14325 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D RND59_16620 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RND59_00450 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RND59_05785 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RND59_16625 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RND59_00445 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RND59_05780 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RND59_16630 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RND59_00440 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RND59_05775 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RND59_16635 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RND59_00435 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RND59_05790 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RND59_16640 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RND59_19975 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D RND59_01925 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D RND59_19980 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D RND59_01920 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D RND59_19985 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D RND59_19990 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D RND59_01910 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D RND59_17920 Fe(3+) dicitrate ABC transporter substrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D RND59_17930 fecD; Fe(3+) dicitrate ABC transporter permease subunit FecD K23182 fecD; ferric citrate transport system permease protein
D RND59_17925 iron chelate uptake ABC transporter family permease subunit K23183 fecC; ferric citrate transport system permease protein
D RND59_17935 fecE; Fe(3+) dicitrate ABC transporter ATP-binding protein FecE K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D RND59_14965 fepB; Fe2+-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D RND59_14975 iron chelate uptake ABC transporter family permease subunit K23186 fepD; iron-siderophore transport system permease protein
D RND59_14980 fepG; iron-enterobactin ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D RND59_14985 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D RND59_12040 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RND59_12045 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RND59_09730 btuF; vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D RND59_12725 btuC; vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein
D RND59_12730 btuD; vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D RND59_11095 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D RND59_11085 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D RND59_11090 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RND59_19680 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D RND59_19670 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein
D RND59_19665 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D RND59_19675 metal ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D RND59_16705 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D RND59_16700 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RND59_16710 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D RND59_16695 ATP-binding cassette domain-containing protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RND59_05220 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D RND59_05215 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RND59_03860 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D RND59_03855 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D RND59_04020 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RND59_15350 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D RND59_15360 lolC; lipoprotein-releasing ABC transporter permease subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D RND59_15355 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RND59_07020 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RND59_07015 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RND59_03340 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RND59_04155 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RND59_11295 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RND59_03345 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RND59_04145 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RND59_11290 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RND59_14165 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RND59_15965 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RND59_04195 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RND59_10785 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RND59_10790 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RND59_14170 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RND59_15970 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RND59_04190 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RND59_10795 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RND59_19340 bile acid:sodium symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RND59_18125 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D RND59_07750 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D RND59_13595 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D RND59_14175 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RND59_17555 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RND59_18635 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RND59_03070 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RND59_04780 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RND59_09275 EmmdR/YeeO family multidrug/toxin efflux MATE transporter K26937 dinF; MATE family, multidrug efflux pump
D RND59_09605 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RND59_19450 xylE; D-xylose transporter XylE K08138 xylE; MFS transporter, SP family, xylose:H+ symportor
D RND59_19870 sugar efflux transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D RND59_07170 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D RND59_07560 3-phenylpropionate MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D RND59_11755 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D RND59_00275 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RND59_14970 entS; enterobactin transporter EntS K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter
D RND59_10000 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RND59_14215 Bcr/CflA family multidrug efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RND59_07980 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RND59_18410 multidrug effflux MFS transporter K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D RND59_18850 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RND59_04980 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RND59_12760 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D RND59_17625 MFS transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D RND59_01325 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RND59_02855 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D RND59_01320 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RND59_04045 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D RND59_19550 fruB; fused PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D RND59_01330 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RND59_11655 ptsG; PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D RND59_15580 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RND59_17865 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D RND59_12060 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D RND59_01845 glucose PTS transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RND59_03925 beta-glucoside-specific PTS transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RND59_08965 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RND59_18230 ascF; PTS cellobiose/arbutin/salicin transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
D RND59_07570 alpha-glucoside-specific PTS transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D RND59_19190 fructose PTS transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D RND59_19195 fructose PTS transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D RND59_19205 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RND59_19540 fruA; PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RND59_19200 fructose PTS transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D RND59_02075 fructose PTS transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D RND59_17800 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D RND59_18620 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D RND59_05640 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D RND59_06465 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D RND59_08900 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D RND59_18615 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D RND59_05655 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D RND59_06475 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D RND59_08890 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D RND59_18610 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D RND59_05650 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D RND59_05660 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D RND59_06480 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D RND59_08895 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D RND59_14900 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D RND59_01820 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D RND59_02095 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D RND59_14895 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D RND59_01800 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D RND59_02090 PTS ascorbate-specific subunit IIBC K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D RND59_14890 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D RND59_01805 PTS sugar transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D RND59_02070 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RND59_04035 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RND59_17945 MIP/aquaporin family protein K02440 glpF; glycerol uptake facilitator
D RND59_18250 ion transporter K10716 kch; voltage-gated potassium channel
D RND59_11560 ion transporter K10716 kch; voltage-gated potassium channel
D RND59_12245 potassium channel family protein K10716 kch; voltage-gated potassium channel
D RND59_03200 ammonium transporter K03320 amt; ammonium transporter, Amt family
D RND59_13645 ammonium transporter K03320 amt; ammonium transporter, Amt family
D RND59_17055 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RND59_04830 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RND59_12895 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RND59_09475 sspA; stringent starvation protein SspA K03599 sspA; stringent starvation protein A
D RND59_16955 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D RND59_16960 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D RND59_13940 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D RND59_08860 mscS; small-conductance mechanosensitive channel MscS K03442 mscS; small conductance mechanosensitive channel
D RND59_17205 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D RND59_17475 magnesium transporter K06213 mgtE; magnesium transporter
D RND59_04050 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D RND59_01550 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D RND59_01545 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RND59_04415 tetratricopeptide repeat protein K21217 motX; sodium-type polar flagellar protein MotX
D RND59_01160 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D RND59_13565 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D RND59_13570 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D RND59_13575 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D RND59_15185 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D RND59_15180 ExbD/TolR family protein K03560 tolR; biopolymer transport protein TolR
D RND59_19440 zinc transporter ZntB K16074 zntB; zinc transporter
D RND59_06350 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D RND59_09410 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RND59_03160 porin K08720 ompU; outer membrane protein OmpU
D RND59_11735 porin K10940 ompT; outer membrane protein OmpT
D RND59_16000 carbohydrate porin K02024 lamB; maltoporin
D RND59_13425 maltoporin K02024 lamB; maltoporin
D RND59_10395 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RND59_17100 porin family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RND59_01145 outer membrane beta-barrel protein K16078 ail; attachment invasion locus protein
D RND59_00985 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D RND59_07195 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D RND59_17915 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RND59_01890 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RND59_15005 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RND59_03515 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D RND59_12745 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D RND59_11985 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RND59_03025 polysaccharide biosynthesis/export family protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D RND59_05105 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein
D RND59_18605 uidC; glucuronide uptake porin UidC K16140 uidC; putative glucuronide porin
D RND59_10230 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D RND59_02285 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D RND59_10740 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D RND59_02680 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D RND59_01750 bamE; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D RND59_04170 autotransporter assembly complex family protein K07278 tamA; translocation and assembly module TamA
D RND59_04165 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB
D RND59_09245 oligogalacturonate-specific porin KdgM family protein K22110 kdgM; oligogalacturonate-specific porin family protein
D RND59_04015 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D RND59_04010 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D RND59_08565 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D RND59_01375 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D RND59_01355 corC; CNNM family magnesium/cobalt transport protein CorC K06189 corC; hemolysin (HlyC) family protein
D RND59_12595 CidA/LrgA family protein K06518 cidA; holin-like protein
D RND59_16980 melB; melibiose:sodium transporter MelB K11104 melB; melibiose permease
D RND59_12880 eat; ethanolamine permease K16238 eat; ethanolamine permease
D RND59_04875 fieF; CDF family cation-efflux transporter FieF K13283 fieF; ferrous-iron efflux pump FieF
D RND59_19390 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D RND59_05840 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RND59_11350 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RND59_11980 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RND59_02150 multidrug efflux RND transporter permease subunit K18146 adeB; multidrug efflux pump
D RND59_11825 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D RND59_05685 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D RND59_01170 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter
D RND59_19700 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D RND59_17440 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D RND59_11790 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D RND59_18100 L-lactate permease K03303 lutP; lactate permease
D RND59_02205 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D RND59_03995 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D RND59_00125 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D RND59_17780 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D RND59_04930 sodium:solute symporter family protein K14393 actP; cation/acetate symporter
D RND59_18295 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D RND59_14160 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D RND59_11510 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D RND59_15425 nhaB; Na(+)/H(+) antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D RND59_12300 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D RND59_08135 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D RND59_04440 kefB; glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D RND59_04445 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D RND59_14665 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D RND59_05965 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D RND59_06295 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D RND59_14670 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D RND59_05960 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RND59_10670 uracil-xanthine permease family protein K02824 uraA; uracil permease
D RND59_10105 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RND59_13650 aromatic amino acid transport family protein K03837 sdaC; serine transporter
D RND59_20510 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D RND59_16280 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D RND59_11570 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D RND59_15570 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D RND59_15565 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D RND59_15560 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RND59_03325 TRAP transporter large permease subunit K21393 yiaN; TRAP-type transport system large permease protein
D RND59_03330 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein
D RND59_03320 DctP family TRAP transporter solute-binding subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D RND59_13450 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D RND59_02815 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RND59_18120 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D RND59_20395 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D RND59_06970 rhtB; homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D RND59_18640 LysE family translocator K05835 rhtC; threonine efflux protein
D RND59_05690 LysE family translocator K05835 rhtC; threonine efflux protein
D RND59_11460 LysE family translocator K05835 rhtC; threonine efflux protein
D RND59_18445 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D RND59_18450 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D RND59_14050 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RND59_11450 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RND59_14045 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RND59_11445 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RND59_14040 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RND59_11440 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RND59_10695 AI-2E family transporter K03548 perM; putative permease
D RND59_04935 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter K09125 yhhQ; queuosine precursor transporter
D RND59_06635 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D RND59_18480 MarC family protein K05595 marC; multiple antibiotic resistance protein
D RND59_09010 MarC family protein K05595 marC; multiple antibiotic resistance protein
D RND59_09650 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RND59_06065 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RND59_10770 FTR1 family protein K07243 FTR; high-affinity iron transporter
D RND59_10775 iron transporter K07230 p19; periplasmic iron binding protein
D RND59_13580 energy transducer TonB K03832 tonB; periplasmic protein TonB
D RND59_15165 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D RND59_15175 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D RND59_15170 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D RND59_09380 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RND59_09375 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D RND59_09370 oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D RND59_00270 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D RND59_00265 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D RND59_00255 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D RND59_04975 efflux RND transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D RND59_19395 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D RND59_17745 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D RND59_05835 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_11345 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_11975 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_02145 efflux RND transporter periplasmic adaptor subunit K18145 adeA; membrane fusion protein, multidrug efflux system
D RND59_20280 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D RND59_03020 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D RND59_11100 FeoA family protein K04758 feoA; ferrous iron transport protein A
D RND59_11105 feoB; Fe(2+) transporter permease subunit FeoB K04759 feoB; ferrous iron transport protein B
D RND59_11110 FeoC-like transcriptional regulator K10123 feoC; putative ferrous iron transport protein C
D RND59_17095 sbmA; peptide antibiotic transporter SbmA K17938 sbmA; peptide/bleomycin uptake transporter
D RND59_06455 uspB; universal stress protein UspB K06144 uspB; universal stress protein B
D RND59_20250 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RND59_15855 MipA/OmpV family protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:vru02044]
D RND59_03515 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
D RND59_17730 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RND59_17745 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D RND59_12745 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D RND59_07315 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D RND59_07320 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D RND59_07325 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RND59_07330 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D RND59_07335 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D RND59_07340 gspH; type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D RND59_07345 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D RND59_07350 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D RND59_07355 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D RND59_07360 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D RND59_07365 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D RND59_07370 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D RND59_03435 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RND59_03420 pilin K02650 pilA; type IV pilus assembly protein PilA
D RND59_03425 ATPase, T2SS/T4P/T4SS family K02652 pilB; type IV pilus assembly protein PilB
D RND59_03430 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D RND59_12780 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D RND59_04620 pilM; pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D RND59_04615 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D RND59_08805 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D RND59_01690 prepilin-type N-terminal cleavage/methylation domain-containing protein K02671 pilV; type IV pilus assembly protein PilV
D RND59_01700 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D RND59_01705 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D RND59_08790 YggT family protein K02221 yggT; YggT family protein
D RND59_15505 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D RND59_18670 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RND59_15340 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D RND59_11145 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RND59_10940 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RND59_10875 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RND59_10885 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RND59_10890 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RND59_10915 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RND59_10920 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D RND59_10930 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RND59_10935 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RND59_03390 dsbC; bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D RND59_18055 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D RND59_18030 icmH; type IVB secretion system protein IcmH/DotU K11892 impK; type VI secretion system protein ImpK
D RND59_18025 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D RND59_18010 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D RND59_18005 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG
D RND59_17995 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D RND59_17990 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D RND59_06055 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D RND59_07150 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D RND59_15960 tssI; type VI secretion system tip protein TssI/VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D RND59_16835 tssI; type VI secretion system tip protein TssI/VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D RND59_17400 tssI; type VI secretion system tip protein TssI/VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D RND59_07145 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D RND59_08655 tssI; type VI secretion system tip protein TssI/VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D RND59_13325 tssI; type VI secretion system tip protein TssI/VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D RND59_18000 tssE; type VI secretion system baseplate subunit TssE K11905 K11905; type VI secretion system protein
D RND59_18020 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D RND59_18035 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D RND59_18050 tssA; type VI secretion system protein TssA K11910 vasJ; type VI secretion system protein VasJ
D RND59_18060 type VI secretion system ImpA family N-terminal domain-containing protein K11911 vasL; type VI secretion system protein VasL
D RND59_18015 tagH; type VI secretion system-associated FHA domain protein TagH K11894 impI; type VI secretion system protein ImpI
D RND59_18045 vasI; type VI secretion system-associated protein VasI K11909 vasI; type VI secretion system protein VasI
D RND59_09690 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RND59_04690 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RND59_02380 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RND59_07675 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RND59_02375 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RND59_03125 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RND59_04295 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RND59_09420 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RND59_07010 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RND59_02385 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RND59_06160 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RND59_06805 tatE; twin-arginine translocase subunit TatE K03116 tatA; sec-independent protein translocase protein TatA
D RND59_06810 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RND59_06815 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:vru02042]
D RND59_09410 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RND59_05970 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:vru02022]
D RND59_02460 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RND59_02465 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RND59_04985 envZ; two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RND59_04990 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RND59_12150 ATP-binding protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D RND59_04890 cpxA; envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D RND59_04885 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D RND59_17265 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RND59_17270 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D RND59_09775 arcB; aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D RND59_09780 arcA; two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D RND59_02135 ATP-binding protein K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RND59_02140 response regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RND59_02920 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D RND59_00245 histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D RND59_00250 narL; two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RND59_03585 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D RND59_14350 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RND59_14000 sensor histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D RND59_15030 sensor histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D RND59_14005 response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D RND59_15020 response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D RND59_14035 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D RND59_11785 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D RND59_14030 response regulator K02475 K02475; two-component system, CitB family, response regulator
D RND59_02755 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D RND59_02760 btsR; two-component system response regulator BtsR K02477 K02477; two-component system, LytTR family, response regulator
D RND59_07265 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RND59_07260 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RND59_15540 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RND59_15545 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D RND59_19055 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RND59_12020 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RND59_11175 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RND59_11165 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RND59_12010 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RND59_11180 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RND59_17165 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_10465 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_11695 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_12795 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_15775 LuxQ periplasmic sensor domain-containing protein K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D RND59_19105 hybrid sensor histidine kinase/response regulator K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D RND59_15495 hybrid sensor histidine kinase/response regulator K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D RND59_15500 hybrid sensor histidine kinase/response regulator K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D RND59_01065 luxU; quorum-sensing phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D RND59_01070 luxO; quorum-sensing sigma-54 dependent transcriptional regulator LuxO K10912 luxO; two-component system, repressor protein LuxO
D RND59_10860 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D RND59_10865 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D RND59_12000 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
C 02035 Bacterial motility proteins [BR:vru02035]
D RND59_11175 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RND59_11190 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RND59_11195 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RND59_07950 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D RND59_12015 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D RND59_10470 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RND59_11180 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RND59_11165 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RND59_12010 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RND59_11170 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D RND59_17165 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_10465 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_11695 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_12795 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RND59_14140 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_14270 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_15290 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_15635 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_16065 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_16930 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17060 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17065 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17220 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17825 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_17855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18270 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18350 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18585 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18715 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_18770 Cache 3/Cache 2 fusion domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_20245 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_20450 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_01635 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_02170 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_03530 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_05330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_05860 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_07415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_07465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_08960 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_09595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_10700 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_11820 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_13005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_13010 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_13615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RND59_20485 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D RND59_01855 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D RND59_10885 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RND59_10890 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RND59_10895 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D RND59_10920 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D RND59_10930 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RND59_10935 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RND59_11145 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RND59_10940 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RND59_10880 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RND59_10910 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RND59_10915 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RND59_10875 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RND59_10510 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RND59_10460 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RND59_10505 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RND59_07040 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RND59_10905 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RND59_10870 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RND59_10475 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RND59_10480 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RND59_10485 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RND59_10495 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RND59_10500 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RND59_10515 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D RND59_10490 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RND59_10520 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RND59_10525 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RND59_10450 flgN; flagellar export chaperone FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D RND59_10435 flagellar assembly protein FlgT K24343 flgT; flagellar H-ring protein FlgT
D RND59_10440 FlgO family outer membrane protein K24344 flgO; flagellar H-ring protein FlgO
D RND59_10445 flgP; flagellar assembly lipoprotein FlgP K09860 flgP; outer membrane protein FlgP
D RND59_04415 tetratricopeptide repeat protein K21217 motX; sodium-type polar flagellar protein MotX
D RND59_01160 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D RND59_10530 flagellin K02406 fliC; flagellin
D RND59_10535 flagellin K02406 fliC; flagellin
D RND59_10820 flagellin K02406 fliC; flagellin
D RND59_10825 flagellin K02406 fliC; flagellin
D RND59_10830 flagellin K02406 fliC; flagellin
D RND59_10840 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D RND59_10850 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D RND59_11160 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RND59_01550 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D RND59_01545 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RND59_10855 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D RND59_10860 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D RND59_10865 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D RND59_10455 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RND59_10835 flaG; flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D RND59_10845 flagellar protein FliT K06604 flaI; flagellar protein FlaI
D RND59_11150 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D RND59_11155 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D RND59_08805 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D RND59_03420 pilin K02650 pilA; type IV pilus assembly protein PilA
D RND59_03425 ATPase, T2SS/T4P/T4SS family K02652 pilB; type IV pilus assembly protein PilB
D RND59_03430 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D RND59_03435 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RND59_12780 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D RND59_04615 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D RND59_04620 pilM; pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D RND59_01690 prepilin-type N-terminal cleavage/methylation domain-containing protein K02671 pilV; type IV pilus assembly protein PilV
D RND59_01700 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:vru04812]
D RND59_08295 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RND59_09675 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RND59_09670 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RND59_15720 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RND59_15725 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RND59_15730 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RND59_17710 AAA family ATPase K03496 parA; chromosome partitioning protein
D RND59_06220 ParA family protein K03496 parA; chromosome partitioning protein
D RND59_11185 ParA family protein K03496 parA; chromosome partitioning protein
D RND59_17715 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RND59_06225 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:vru04147]
D RND59_01240 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RND59_03560 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RND59_19995 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RND59_00075 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RND59_08850 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RND59_08870 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RND59_11685 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RND59_10005 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RND59_13080 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RND59_02420 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D RND59_04750 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RND59_01715 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RND59_07945 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RND59_03275 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RND59_02265 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RND59_07670 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RND59_07895 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RND59_15410 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RND59_19340 bile acid:sodium symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RND59_00010 fadD; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RND59_18835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_20535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RND59_01235 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RND59_00950 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RND59_19575 lyase family protein K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RND59_04650 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RND59_04105 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RND59_16335 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RND59_13440 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RND59_17650 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RND59_17940 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RND59_07270 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RND59_06835 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RND59_17305 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RND59_19140 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RND59_03715 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RND59_07425 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RND59_03365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RND59_20185 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D RND59_18895 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RND59_04775 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RND59_08740 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:vru02048]
D RND59_19240 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RND59_19235 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RND59_19225 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RND59_19230 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RND59_19255 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RND59_04585 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RND59_02050 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RND59_14285 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D RND59_14290 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B
D RND59_14845 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D RND59_06705 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D RND59_18145 type II toxin-antitoxin system MqsA family antitoxin K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D RND59_09675 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RND59_08295 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RND59_03485 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RND59_03490 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RND59_10390 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RND59_03655 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D RND59_02355 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RND59_01965 dndB; DNA sulfur modification protein DndB K19169 dndB; DNA sulfur modification protein DndB
D RND59_01970 DNA phosphorothioation system sulfurtransferase DndC K19170 dndC; DNA sulfur modification protein DndC
D RND59_01975 dndD; DNA sulfur modification protein DndD K19171 dndD; DNA sulfur modification protein DndD
D RND59_01980 dndE; DNA sulfur modification protein DndE K19172 dndE; DNA sulfur modification protein DndE
D RND59_02010 dptF; DNA phosphorothioation-dependent restriction protein DptF K19173 dptF; DNA phosphorothioation-dependent restriction protein DptF
D RND59_02005 dptG; DNA phosphorothioation-dependent restriction protein DptG K19174 dptG; DNA phosphorothioation-dependent restriction protein DptG
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:vru01504]
D RND59_12300 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D RND59_15645 catB; type B chloramphenicol O-acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D RND59_05835 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_11345 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_11975 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RND59_05840 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RND59_11350 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RND59_11980 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RND59_11985 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RND59_01295 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RND59_16680 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RND59_02135 ATP-binding protein K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RND59_02140 response regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RND59_02145 efflux RND transporter periplasmic adaptor subunit K18145 adeA; membrane fusion protein, multidrug efflux system
D RND59_02150 multidrug efflux RND transporter permease subunit K18146 adeB; multidrug efflux pump
D RND59_03515 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:vru00537]
D RND59_17305 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RND59_13080 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:vru03100]
D RND59_02635 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RND59_05805 tRNA-His K14226 tRNA-His; tRNA His
D RND59_05815 tRNA-His K14226 tRNA-His; tRNA His
D RND59_03115 tRNA-Met K14230 tRNA-Met; tRNA Met
D RND59_07775 tRNA-Met K14230 tRNA-Met; tRNA Met
D RND59_08605 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RND59_01945 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D RND59_19510 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D RND59_15660 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D RND59_20180 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D RND59_09385 NADP-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RND59_16130 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RND59_20455 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D RND59_20370 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D RND59_04175 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RND59_00070 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RND59_15845 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RND59_12080 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D RND59_06100 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D RND59_10730 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RND59_20365 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D RND59_17080 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RND59_10815 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D RND59_17215 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RND59_00480 hmpA; NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D RND59_06450 ftnA; non-heme ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D RND59_16850 norW; NADH:flavorubredoxin reductase NorW K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-]
D RND59_10685 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D RND59_13445 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D RND59_13460 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RND59_20305 nrdG; anaerobic ribonucleoside-triphosphate reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D RND59_15295 pflA; pyruvate formate lyase 1-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RND59_18650 hybrid-cluster NAD(P)-dependent oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D RND59_08180 4Fe-4S dicluster domain-containing protein K12136 hyfA; hydrogenase-4 component A [EC:1.-.-.-]
D RND59_08185 hyfB; hydrogenase 4 subunit B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D RND59_08190 respiratory chain complex I subunit 1 family protein K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-]
D RND59_08195 hydrogenase 4 subunit D K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-]
D RND59_08200 hyfE; hydrogenase 4 membrane subunit K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D RND59_08205 hydrogenase 4 subunit F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D RND59_08210 hydrogenase large subunit K12142 hyfG; hydrogenase-4 component G [EC:1.-.-.-]
D RND59_09195 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RND59_00885 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RND59_20165 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D RND59_17575 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D RND59_01360 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RND59_03045 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D RND59_11885 N-acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D RND59_16575 GNAT family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D RND59_19125 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D RND59_07510 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D RND59_17570 GNAT family N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D RND59_12380 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RND59_12375 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D RND59_00915 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D RND59_06930 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D RND59_02845 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RND59_14675 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RND59_16200 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RND59_11840 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RND59_03525 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D RND59_08015 AMP-binding protein K21284 acmA; 3-hydroxy-4-methylanthranilate adenylyltransferase [EC:2.7.7.97]
D RND59_15575 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D RND59_15000 fes; enterochelin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108]
D RND59_17850 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D RND59_11410 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D RND59_14485 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RND59_11140 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RND59_08775 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RND59_06830 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RND59_09850 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RND59_11650 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RND59_11005 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D RND59_10115 frsA; esterase FrsA K11750 frsA; esterase FrsA [EC:3.1.-.-]
D RND59_19730 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D RND59_16010 family 16 glycosylhydrolase K01216 bglS; licheninase [EC:3.2.1.73]
D RND59_13385 glycosyl hydrolase 53 family protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D RND59_13415 glycosyl hydrolase 53 family protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D RND59_20435 arabinan endo-1,5-alpha-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D RND59_11920 RICIN domain-containing protein K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D RND59_17600 glycoside hydrolase family 30 beta sandwich domain-containing protein K15924 xynC; glucuronoarabinoxylan endo-1,4-beta-xylanase [EC:3.2.1.136]
D RND59_05945 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RND59_08325 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RND59_05700 yqfB; N(4)-acetylcytidine aminohydrolase K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D RND59_03950 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D RND59_08910 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D RND59_03535 inorganic triphosphatase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D RND59_10340 nudI; nucleoside triphosphatase NudI K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-]
D RND59_11585 nucleoside triphosphate pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D RND59_15865 ATPase RavA domain-containing protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RND59_16940 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RND59_16870 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RND59_11740 rhamnogalacturonan lyase B N-terminal domain-containing protein K18195 RGL4; rhamnogalacturonan endolyase [EC:4.2.2.23]
D RND59_14575 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K26365 cangL; canavanine-gamma-lyase [EC:4.4.1.43]
D RND59_09985 csdA; cysteine desulfurase CsdA K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D RND59_19885 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D RND59_04100 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D RND59_13590 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D RND59_01120 rsxD; electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D RND59_01115 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D RND59_01110 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D RND59_10025 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D RND59_10030 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D RND59_10035 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D RND59_10810 FMN-binding protein K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D RND59_10040 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D RND59_10045 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D RND59_10050 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
C 99981 Carbohydrate metabolism
D RND59_03230 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D RND59_02400 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
D RND59_18095 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D RND59_18090 LutB/LldF family L-lactate oxidation iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D RND59_18085 lactate utilization protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D RND59_18940 expansin EXLX1 family cellulose-binding protein K20628 exlX; expansin
C 99982 Energy metabolism
D RND59_08250 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D RND59_02330 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D RND59_14120 yfaE; class I ribonucleotide reductase maintenance protein YfaE K11107 yfaE; ferredoxin
D RND59_01125 rsxG; electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D RND59_01130 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D RND59_01105 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D RND59_08235 4Fe-4S dicluster domain-containing protein K05796 hydN; electron transport protein HydN
D RND59_06200 mioC; FMN-binding protein MioC K06205 mioC; MioC protein
D RND59_03400 fldB; flavodoxin FldB K03840 fldB; flavodoxin II
D RND59_08215 formate hydrogenlyase complex iron-sulfur subunit K12143 hyfH; hydrogenase-4 component H
D RND59_02350 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D RND59_18910 cytochrome b562 K15536 cybC; soluble cytochrome b562
D RND59_08220 NADH-quinone oxidoreductase subunit B family protein K15832 hycG; formate hydrogenlyase subunit 7
D RND59_16845 norV; anaerobic nitric oxide reductase flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D RND59_11000 fldA; flavodoxin FldA K03839 fldA; flavodoxin I
D RND59_20190 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RND59_01310 cysZ; sulfate transporter CysZ K06203 cysZ; CysZ protein
D RND59_18595 VOC family protein K08234 yaeR; glyoxylase I family protein
D RND59_08800 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RND59_15470 lipopolysaccharide assembly protein LapA domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A
D RND59_15465 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
D RND59_05275 glycosyltransferase family 25 protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D RND59_06870 heme biosynthesis HemY N-terminal domain-containing protein K02498 hemY; HemY protein
D RND59_06800 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D RND59_06795 SCP2 domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D RND59_05845 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D RND59_03050 SCP2 domain-containing protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D RND59_13625 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D RND59_17815 DoxX family protein K15977 K15977; putative oxidoreductase
D RND59_03480 DoxX family membrane protein K15977 K15977; putative oxidoreductase
D RND59_11120 DoxX family protein K15977 K15977; putative oxidoreductase
D RND59_20060 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RND59_15625 cold-shock protein K03704 cspA; cold shock protein
D RND59_16675 cold-shock protein K03704 cspA; cold shock protein
D RND59_16895 cold-shock protein K03704 cspA; cold shock protein
D RND59_12355 cspD; cold shock domain-containing protein CspD K03704 cspA; cold shock protein
D RND59_07715 Rsd/AlgQ family anti-sigma factor K07740 rsd; regulator of sigma D
D RND59_08225 formate hydrogenlyase maturation HycH family protein K15834 hycH; formate hydrogenlyase maturation protein HycH
D RND59_03205 glnK; P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D RND59_07405 Tex family protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D RND59_14250 META domain-containing protein K03668 hslJ; heat shock protein HslJ
D RND59_12360 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RND59_15535 tig; trigger factor K03545 tig; trigger factor
D RND59_06095 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D RND59_08255 HupE/UreJ family protein K03192 ureJ; urease accessory protein
D RND59_01765 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D RND59_08265 hypC; HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D RND59_08270 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D RND59_08275 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D RND59_08260 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D RND59_06005 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D RND59_19485 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
D RND59_18675 OsmC family protein K07397 yhfA; putative redox protein
D RND59_07385 nfuA; Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
D RND59_01255 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein
C 99976 Replication and repair
D RND59_00345 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D RND59_01510 xni; flap endonuclease Xni K01146 xni; protein Xni
D RND59_05325 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D RND59_06785 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D RND59_20025 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D RND59_09495 YraN family protein K07460 yraN; putative endonuclease
D RND59_15790 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D RND59_05940 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D RND59_12140 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D RND59_05930 topoisomerase DNA-binding C4 zinc finger domain-containing protein K07479 yrdD; putative DNA topoisomerase
D RND59_15105 DUF927 domain-containing protein K06919 K06919; putative DNA primase/helicase
D RND59_00150 IS3 family transposase K07497 K07497; putative transposase
D RND59_00495 IS3 family transposase K07497 K07497; putative transposase
D RND59_02250 IS3 family transposase K07497 K07497; putative transposase
D RND59_02500 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D RND59_14295 pspA; phage shock protein PspA K03969 pspA; phage shock protein A
D RND59_00940 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RND59_16375 glycoside-pentoside-hexuronide (GPH):cation symporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RND59_06340 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RND59_14065 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D RND59_13110 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D RND59_19465 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RND59_03545 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RND59_09235 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D RND59_14265 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RND59_10085 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RND59_11670 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RND59_02130 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RND59_09835 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RND59_13535 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RND59_02895 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D RND59_19305 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D RND59_09855 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D RND59_15025 DASS family sodium-coupled anion symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D RND59_14650 aspartate:alanine antiporter K07085 K07085; putative transport protein
D RND59_19660 putative transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D RND59_14530 septation protein A K06190 ispZ; intracellular septation protein
D RND59_05975 sporulation protein K06377 spo0M; sporulation-control protein
D RND59_07735 murein hydrolase activator EnvC K22719 envC; murein hydrolase activator
C 99993 Cell motility
D RND59_15395 lpoB; penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator
D RND59_14625 TfoX/Sxy family DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins
D RND59_05705 TfoX/Sxy family protein K07343 tfoX; DNA transformation protein and related proteins
D RND59_01485 syd; SecY-interacting protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D RND59_13875 proQ; RNA chaperone ProQ K03607 proQ; ProP effector
D RND59_06445 uspA; universal stress protein UspA K06149 uspA; universal stress protein A
D RND59_13695 uspE; universal stress protein UspE K14055 uspE; universal stress protein E
D RND59_08480 universal stress protein K14061 uspF; universal stress protein F
D RND59_07275 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D RND59_01345 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RND59_03915 PhoH family protein K07175 phoH2; PhoH-like ATPase
D RND59_15305 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D RND59_14055 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein
D RND59_19080 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein
D RND59_07555 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein
D RND59_03550 TIGR04211 family SH3 domain-containing protein K07184 ygiM; SH3 domain protein
D RND59_09870 YtjB family periplasmic protein K07186 smp; membrane protein
D RND59_13905 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D RND59_12135 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D RND59_10625 lolB; lipoprotein insertase outer membrane protein LolB K02494 lolB; outer membrane lipoprotein LolB
D RND59_11205 MlaA family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RND59_12385 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D RND59_10235 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D RND59_09200 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D RND59_03075 nlpI; lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D RND59_10420 ompW; outer membrane protein OmpW K07275 ompW; outer membrane protein
D RND59_07930 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D RND59_00020 Slp family lipoprotein K07285 slp; outer membrane lipoprotein
D RND59_10010 YajG family lipoprotein K07286 yajG; uncharacterized lipoprotein
D RND59_01000 AsmA family protein K07289 asmA; AsmA protein
D RND59_19070 hypothetical protein K07340 ybbJ; inner membrane protein
D RND59_11285 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D RND59_02305 rodZ; cytoskeleton protein RodZ K15539 rodZ; cytoskeleton protein RodZ
D RND59_16345 DUF1656 domain-containing protein K21695 aaeX; protein AaeX
C 99994 Others
D RND59_02425 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D RND59_07900 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D RND59_15995 cutA; divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D RND59_08545 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D RND59_06895 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D RND59_00100 bacteriohemerythrin K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RND59_01180 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D RND59_13685 glucosaminidase domain-containing protein K03796 bax; Bax protein
D RND59_12995 pqiB; intermembrane transport protein PqiB K06192 pqiB; paraquat-inducible protein B
D RND59_04245 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D RND59_00230 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein
D RND59_18905 phosphatase K04477 ycdX; putative hydrolase
D RND59_09810 grcA; autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D RND59_03180 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D RND59_07280 virulence factor BrkB family protein K07058 K07058; membrane protein
D RND59_04900 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D RND59_09980 csdE; cysteine desulfurase sulfur acceptor subunit CsdE K02426 sufE; cysteine desulfuration protein SufE
D RND59_12280 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D RND59_13455 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D RND59_07845 SlyX family protein K03745 slyX; SlyX protein
D RND59_05935 DUF494 family protein K03747 smg; Smg protein
D RND59_16080 CreA family protein K05805 creA; CreA protein
D RND59_08830 SprT family zinc-dependent metalloprotease K02742 sprT; SprT protein
D RND59_01185 SPOR domain-containing protein K03749 dedD; DedD protein
D RND59_04590 AAA family ATPase K03112 damX; DamX protein
D RND59_14440 ElyC/SanA/YdcF family protein K03748 sanA; SanA protein
D RND59_12990 PqiA/YebS family transporter subunit K03808 pqiA; paraquat-inducible protein A
D RND59_18300 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D RND59_06935 hypothetical protein K08985 K08985; putative lipoprotein
D RND59_12235 DUF350 domain-containing protein K08989 K08989; putative membrane protein
D RND59_13190 TIGR01620 family protein K08990 ycjF; putative membrane protein
D RND59_16395 YagU family protein K08996 yagU; putative membrane protein
D RND59_15245 YchJ family metal-binding protein K09858 K09858; SEC-C motif domain protein
D RND59_00350 YbaY family lipoprotein K09914 K09914; putative lipoprotein
D RND59_12830 MalM family protein K05775 malM; maltose operon periplasmic protein
D RND59_20040 PhnA domain-containing protein K06193 phnA; protein PhnA
C 99997 Function unknown
D RND59_14830 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D RND59_09000 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D RND59_01840 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein
D RND59_08945 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein
D RND59_04055 Hcp family type VI secretion system effector K06887 K06887; uncharacterized protein
D RND59_06685 Hcp family type VI secretion system effector K06887 K06887; uncharacterized protein
D RND59_08030 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein
D RND59_06575 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W
D RND59_12625 phage baseplate protein K06903 W; Bacteriophage baseplate protein W
D RND59_12705 phage late control D family protein K06905 D; Bacteriophage probable baseplate hub protein
D RND59_12695 phage tail protein K06906 gpU; phage tail protein
D RND59_06540 phage tail sheath C-terminal domain-containing protein K06907 FI; Bacteriophage tail sheath protein
D RND59_12675 phage tail protein K06907 FI; Bacteriophage tail sheath protein
D RND59_12680 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D RND59_13185 YcjX family protein K06918 K06918; uncharacterized protein
D RND59_14695 DUF134 domain-containing protein K06933 K06933; uncharacterized protein
D RND59_14245 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D RND59_00930 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D RND59_00895 NAD(P)/FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D RND59_15385 ycfP; alpha/beta hydrolase YcfP K07000 K07000; uncharacterized protein
D RND59_03495 yqiA; esterase YqiA K07000 K07000; uncharacterized protein
D RND59_18865 ExeM/NucH family extracellular endonuclease K07004 K07004; uncharacterized protein
D RND59_11540 DUF3413 domain-containing protein K07014 K07014; uncharacterized protein
D RND59_04460 hydrolase K07019 K07019; uncharacterized protein
D RND59_01525 alpha/beta family hydrolase K07020 K07020; uncharacterized protein
D RND59_12970 VOC family protein K07032 K07032; uncharacterized protein
D RND59_15850 acetate uptake transporter K07034 K07034; uncharacterized protein
D RND59_15150 UPF0149 family protein K07039 K07039; uncharacterized protein
D RND59_12130 SEC-C metal-binding domain-containing protein K07039 K07039; uncharacterized protein
D RND59_04435 YheV family putative zinc ribbon protein K07070 K07070; uncharacterized protein
D RND59_01280 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D RND59_19260 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_08715 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_08695 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_01790 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_12915 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_18165 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_18795 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_16555 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_16510 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_18200 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_11890 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_00130 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_00330 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_00590 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_00750 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_00815 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_02015 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_06700 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_14825 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_17910 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_18515 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_18700 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D RND59_01720 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RND59_08490 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RND59_11720 SO_0444 family Cu/Zn efflux transporter K07089 K07089; uncharacterized protein
D RND59_15265 TSUP family transporter K07090 K07090; uncharacterized protein
D RND59_02850 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RND59_09715 TSUP family transporter K07090 K07090; uncharacterized protein
D RND59_09500 penicillin-binding protein activator K07121 K07121; uncharacterized protein
D RND59_14410 hypothetical protein K07126 K07126; uncharacterized protein
D RND59_18290 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D RND59_19290 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D RND59_09765 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D RND59_18740 hybrid-cluster NAD(P)-dependent oxidoreductase K07140 K07140; MOSC domain-containing protein
D RND59_06155 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D RND59_06515 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D RND59_09130 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D RND59_08785 yggU; DUF167 family protein YggU K09131 K09131; uncharacterized protein
D RND59_01420 ybeD; DUF493 family protein YbeD K09158 K09158; uncharacterized protein
D RND59_00925 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D RND59_15300 YfbU family protein K09161 K09161; uncharacterized protein
D RND59_00890 DUF1365 family protein K09701 K09701; uncharacterized protein
D RND59_17725 FapA family protein K09749 K09749; uncharacterized protein
D RND59_01605 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D RND59_14540 YciI family protein K09780 K09780; uncharacterized protein
D RND59_18685 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D RND59_15310 YeaH/YhbH family protein K09786 K09786; uncharacterized protein
D RND59_01935 YbaN family protein K09790 K09790; uncharacterized protein
D RND59_15325 Trm112 family protein K09791 K09791; uncharacterized protein
D RND59_01755 RnfH family protein K09801 K09801; uncharacterized protein
D RND59_15805 DUF496 family protein K09802 K09802; uncharacterized protein
D RND59_08865 oxidative stress defense protein K09807 K09807; uncharacterized protein
D RND59_18915 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D RND59_10055 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D RND59_13890 S1-like domain-containing RNA-binding protein K00243 K00243; uncharacterized protein
D RND59_07480 DUF2309 domain-containing protein K09822 K09822; uncharacterized protein
D RND59_13000 ABC-type transport auxiliary lipoprotein family protein K09857 K09857; uncharacterized protein
D RND59_15405 hypothetical protein K09859 K09859; uncharacterized protein
D RND59_09840 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D RND59_03450 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D RND59_05025 DUF416 family protein K09891 K09891; uncharacterized protein
D RND59_06855 yihI; Der GTPase-activating protein YihI K09894 K09894; uncharacterized protein
D RND59_03685 YecA family protein K09895 K09895; uncharacterized protein
D RND59_05980 YihD family protein K09896 K09896; uncharacterized protein
D RND59_17805 DUF413 domain-containing protein K09897 K09897; uncharacterized protein
D RND59_04465 YheU family protein K09898 K09898; uncharacterized protein
D RND59_12095 yfbV; terminus macrodomain insulation protein YfbV K09899 K09899; uncharacterized protein
D RND59_14375 HI1450 family dsDNA-mimic protein K09901 K09901; uncharacterized protein
D RND59_15715 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D RND59_11545 YejL family protein K09904 K09904; uncharacterized protein
D RND59_11130 VOC family protein K09907 K09907; uncharacterized protein
D RND59_09455 zapG; Z-ring associated protein ZapG K09908 K09908; uncharacterized protein
D RND59_15250 DUF2057 domain-containing protein K09909 K09909; uncharacterized protein
D RND59_20265 DUF2057 family protein K09909 K09909; uncharacterized protein
D RND59_02935 DUF2057 domain-containing protein K09909 K09909; uncharacterized protein
D RND59_11730 DUF2057 family protein K09909 K09909; uncharacterized protein
D RND59_03210 YacL family protein K09910 K09910; uncharacterized protein
D RND59_13805 matP; macrodomain Ter protein MatP K09911 K09911; uncharacterized protein
D RND59_15795 DUF480 domain-containing protein K09915 K09915; uncharacterized protein
D RND59_00060 DUF1315 family protein K09916 K09916; uncharacterized protein
D RND59_09935 YebG family protein K09918 K09918; uncharacterized protein
D RND59_03505 DUF1249 family protein K09920 K09920; uncharacterized protein
D RND59_06915 DUF484 family protein K09921 K09921; uncharacterized protein
D RND59_16480 DMT family protein K09922 K09922; uncharacterized protein
D RND59_15345 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D RND59_03470 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D RND59_07840 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein
D RND59_10675 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein
D RND59_12755 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein
D RND59_17300 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D RND59_04200 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D RND59_17120 DUF3820 family protein K09954 K09954; uncharacterized protein
D RND59_18255 nucleotidyltransferase family protein K09962 K09962; uncharacterized protein
D RND59_10380 TraB/GumN family protein K09973 K09973; uncharacterized protein
D RND59_11025 DUF1853 family protein K09977 K09977; uncharacterized protein
D RND59_12255 DUF2170 family protein K09980 K09980; uncharacterized protein
D RND59_03540 TIGR00153 family protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 30, 2024