+D GENES KO
#
KEGG Orthology (KO) - Xanthomonas dyei
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:xdy00010]
D NYR95_12115 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_16110 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_16455 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_10405 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NYR95_18085 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D NYR95_00655 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NYR95_17460 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NYR95_14635 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NYR95_17505 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NYR95_17480 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NYR95_15510 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NYR95_10055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NYR95_17470 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NYR95_12265 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NYR95_03410 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NYR95_19180 dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NYR95_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_19170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_03870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NYR95_18570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NYR95_00160 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NYR95_06590 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NYR95_11615 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NYR95_11660 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NYR95_00680 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D NYR95_22060 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NYR95_07165 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NYR95_18020 HAD-IA family hydrolase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D NYR95_18765 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_20670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_22620 lytic murein transglycosylase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D NYR95_16230 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:xdy00020]
D NYR95_17730 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D NYR95_10870 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D NYR95_10885 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D NYR95_20315 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NYR95_05920 isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D NYR95_09125 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D NYR95_09120 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NYR95_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_19170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_17015 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NYR95_17020 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NYR95_12080 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NYR95_12070 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NYR95_12090 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NYR95_12085 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D NYR95_08850 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D NYR95_09155 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NYR95_05715 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NYR95_03410 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NYR95_19180 dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:xdy00030]
D NYR95_10405 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NYR95_12110 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NYR95_21490 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NYR95_12120 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D NYR95_04045 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D NYR95_02830 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NYR95_17650 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NYR95_05205 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NYR95_17945 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D NYR95_00975 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D NYR95_04865 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D NYR95_16225 carbohydrate kinase family protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D NYR95_18765 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_20670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_05435 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NYR95_12125 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D NYR95_12130 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D NYR95_09600 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D NYR95_16960 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D NYR95_03255 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D NYR95_22355 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D NYR95_14740 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D NYR95_22160 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D NYR95_00770 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D NYR95_17460 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NYR95_00655 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NYR95_18085 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:xdy00040]
D NYR95_00785 pectinesterase family protein K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D NYR95_12840 putative acyl-CoA thioester hydrolase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D NYR95_07940 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D NYR95_18670 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D NYR95_18675 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D NYR95_00965 kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D NYR95_00970 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D NYR95_03960 glycoside hydrolase family 28 protein K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15]
D NYR95_12845 glycosyl hydrolase family 28 protein K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15]
D NYR95_22370 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D NYR95_22310 D-galactonate dehydratase family protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D NYR95_22325 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D NYR95_09205 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NYR95_12400 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NYR95_02830 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NYR95_10335 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D NYR95_10340 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D NYR95_22290 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D NYR95_13950 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D NYR95_17780 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D NYR95_17845 FGGY-family carbohydrate kinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:xdy00051]
D NYR95_10440 glycoside hydrolase family 5 protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D NYR95_09235 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D NYR95_18770 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D NYR95_18765 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_20670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_22090 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D NYR95_22095 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D NYR95_22110 L-fuconate dehydratase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D NYR95_22100 SDR family oxidoreductase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D NYR95_22105 fumarylacetoacetate hydrolase family protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D NYR95_18085 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D NYR95_00655 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NYR95_13710 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D NYR95_10340 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D NYR95_22290 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D NYR95_17460 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NYR95_14635 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NYR95_00975 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D NYR95_13715 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D NYR95_07995 PTS fructose IIA subunit family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:xdy00052]
D NYR95_07165 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NYR95_12400 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NYR95_18765 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_20670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_12115 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_16110 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_16455 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_07625 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D NYR95_22365 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D NYR95_16215 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D NYR95_16245 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D NYR95_18085 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D NYR95_04760 Gfo/Idh/MocA family oxidoreductase K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48]
D NYR95_10285 dgoD; galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D NYR95_10275 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D NYR95_10290 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D NYR95_14255 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D NYR95_14275 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D NYR95_17305 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:xdy00053]
D NYR95_09205 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NYR95_03255 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D NYR95_22355 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D NYR95_22090 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D NYR95_20650 SDR family NAD(P)-dependent oxidoreductase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NYR95_17770 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D NYR95_10280 SMP-30/gluconolactonase/LRE family protein K13874 araB; L-arabinonolactonase [EC:3.1.1.15]
D NYR95_13950 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D NYR95_17780 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D NYR95_17785 kdgD; 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D NYR95_17760 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:xdy00500]
D NYR95_14255 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D NYR95_14275 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D NYR95_17305 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D NYR95_18405 alpha-amylase family protein K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D NYR95_12400 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NYR95_03210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_06585 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_08790 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_10425 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_16140 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_20445 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_22320 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_04435 bcsA; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D NYR95_00140 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NYR95_00150 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NYR95_00155 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NYR95_03665 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NYR95_13800 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NYR95_17290 glycoside hydrolase family 6 protein K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D NYR95_16230 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D NYR95_02560 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D NYR95_00885 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NYR95_02565 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NYR95_04770 alpha-amylase family protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D NYR95_00880 treS; maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D NYR95_02575 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D NYR95_00875 DUF3416 domain-containing protein K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D NYR95_02590 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D NYR95_17150 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D NYR95_02580 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D NYR95_02570 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D NYR95_16955 otsA; alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D NYR95_16945 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D NYR95_03615 treA; alpha,alpha-trehalase TreA K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D NYR95_18765 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_20670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_12115 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_16110 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_16455 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_10405 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NYR95_09235 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:xdy00520]
D NYR95_08155 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NYR95_16130 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D NYR95_04210 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D NYR95_09235 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D NYR95_04205 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NYR95_19040 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NYR95_14680 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D NYR95_19090 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NYR95_20595 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D NYR95_12855 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D NYR95_15870 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D NYR95_15875 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D NYR95_08055 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NYR95_10480 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NYR95_11965 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D NYR95_07135 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D NYR95_07070 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D NYR95_21395 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D NYR95_22085 family 43 glycosylhydrolase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D NYR95_22315 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D NYR95_12115 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_16110 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_16455 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_18765 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_20670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_12400 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NYR95_09205 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NYR95_20650 SDR family NAD(P)-dependent oxidoreductase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D NYR95_07995 PTS fructose IIA subunit family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D NYR95_10405 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NYR95_18770 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00620 Pyruvate metabolism [PATH:xdy00620]
D NYR95_22060 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NYR95_03410 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NYR95_19180 dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NYR95_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_19170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_03870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NYR95_18570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NYR95_00160 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NYR95_06590 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NYR95_11615 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NYR95_11660 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NYR95_17470 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NYR95_08555 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NYR95_03165 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NYR95_03155 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NYR95_14685 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NYR95_05375 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NYR95_00680 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D NYR95_00710 lldD; FMN-dependent L-lactate dehydrogenase LldD K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D NYR95_01265 poxB; ubiquinone-dependent pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D NYR95_19015 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D NYR95_06020 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D NYR95_14740 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D NYR95_18280 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D NYR95_05715 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NYR95_08850 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D NYR95_09155 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NYR95_04805 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NYR95_12265 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NYR95_01460 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D NYR95_01205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_08240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_18190 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:xdy00630]
D NYR95_01465 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D NYR95_22060 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NYR95_01460 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D NYR95_05715 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NYR95_17730 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D NYR95_10870 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D NYR95_10885 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D NYR95_01205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_08240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_12995 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D NYR95_18380 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D NYR95_06715 catalase K03781 katE; catalase [EC:1.11.1.6]
D NYR95_20950 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D NYR95_21190 katB; catalase KatB K03781 katE; catalase [EC:1.11.1.6]
D NYR95_14740 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D NYR95_03375 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D NYR95_17475 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D NYR95_18960 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D NYR95_01155 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_13565 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_13575 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_04485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NYR95_06730 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D NYR95_16065 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NYR95_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_19170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_16060 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D NYR95_23010 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D NYR95_12130 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D NYR95_01850 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D NYR95_09620 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:xdy00640]
D NYR95_22060 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NYR95_02690 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D NYR95_02685 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D NYR95_02675 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D NYR95_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_19170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_13655 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D NYR95_08075 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR95_08555 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NYR95_03165 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NYR95_03155 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NYR95_14685 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NYR95_13615 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D NYR95_17020 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NYR95_17015 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NYR95_07645 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D NYR95_06240 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D NYR95_06245 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D NYR95_06250 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D NYR95_10885 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D NYR95_06235 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:xdy00650]
D NYR95_01205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_08240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_11550 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D NYR95_08075 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR95_09380 enoyl-CoA hydratase-related protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D NYR95_00760 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D NYR95_12230 class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D NYR95_12235 phaE; class III poly(R)-hydroxyalkanoic acid synthase subunit PhaE K22881 phaE; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaE
D NYR95_08525 polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D NYR95_12995 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D NYR95_18380 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D NYR95_02095 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D NYR95_02100 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D NYR95_12080 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NYR95_12070 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NYR95_12090 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NYR95_12085 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D NYR95_00585 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NYR95_13515 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NYR95_10735 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D NYR95_18760 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D NYR95_18755 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D NYR95_12245 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D NYR95_18175 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NYR95_18180 acetolactate synthase K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:xdy00660]
D NYR95_18175 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NYR95_18180 acetolactate synthase K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D NYR95_17020 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NYR95_17015 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NYR95_21920 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D NYR95_18215 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D NYR95_18210 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D NYR95_18200 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:xdy00562]
D NYR95_05810 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D NYR95_16680 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D NYR95_12900 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NYR95_13785 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D NYR95_04835 histidine-type phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D NYR95_06630 histidine-type phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D NYR95_07645 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D NYR95_14635 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:xdy00190]
D NYR95_14620 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D NYR95_14615 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D NYR95_14610 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D NYR95_14605 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D NYR95_14600 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D NYR95_14595 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D NYR95_14590 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D NYR95_14585 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D NYR95_14580 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D NYR95_14575 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D NYR95_14570 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D NYR95_14565 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D NYR95_14560 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D NYR95_14555 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D NYR95_20245 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D NYR95_12080 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NYR95_12070 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NYR95_12090 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NYR95_12085 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D NYR95_13450 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D NYR95_13445 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D NYR95_13440 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D NYR95_20500 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NYR95_06995 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D NYR95_20525 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D NYR95_20540 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D NYR95_20545 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D NYR95_20530 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D NYR95_20505 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D NYR95_06990 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D NYR95_06985 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D NYR95_06980 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D NYR95_07960 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NYR95_12665 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NYR95_19530 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NYR95_07965 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NYR95_12670 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NYR95_19535 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NYR95_12675 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D NYR95_09865 c-type cytochrome K08738 CYC; cytochrome c
D NYR95_19125 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NYR95_19115 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NYR95_19120 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NYR95_19130 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NYR95_19110 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NYR95_19145 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NYR95_19135 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NYR95_19140 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NYR95_18115 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D NYR95_05890 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D NYR95_05385 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:xdy00680]
D NYR95_03850 methanol/ethanol family PQQ-dependent dehydrogenase K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10]
D NYR95_18565 gfa; S-(hydroxymethyl)glutathione synthase K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22]
D NYR95_03870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NYR95_18570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NYR95_18560 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D NYR95_04485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NYR95_10055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NYR95_04805 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NYR95_05715 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NYR95_17460 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NYR95_00655 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NYR95_18085 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D NYR95_22060 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NYR95_12265 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D NYR95_15510 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NYR95_00110 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NYR95_10700 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NYR95_09675 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:xdy00910]
D NYR95_07185 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D NYR95_13675 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D NYR95_01155 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_13565 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_13575 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_00175 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D NYR95_00170 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D NYR95_08865 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D NYR95_09355 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D NYR95_09505 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D NYR95_21480 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:xdy00920]
D NYR95_05775 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D NYR95_05780 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D NYR95_05785 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D NYR95_05790 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D NYR95_04915 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D NYR95_16885 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D NYR95_04905 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D NYR95_16880 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D NYR95_04910 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D NYR95_16875 ATP-binding cassette domain-containing protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D NYR95_17380 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D NYR95_17385 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D NYR95_16090 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D NYR95_17400 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D NYR95_15840 sulfite reductase subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D NYR95_17390 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D NYR95_21245 sulfite reductase flavoprotein subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D NYR95_17395 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D NYR95_09395 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D NYR95_17440 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NYR95_18995 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NYR95_12640 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D NYR95_15955 homoserine O-succinyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D NYR95_15950 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D NYR95_14075 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:xdy00061]
D NYR95_08555 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NYR95_03165 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NYR95_03155 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NYR95_14685 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NYR95_06190 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D NYR95_21590 xanC; xanthomonadin biosynthesis acyl carrier protein XanC K02078 acpP; acyl carrier protein
D NYR95_03355 mdcH; malonate decarboxylase subunit epsilon K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NYR95_06180 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NYR95_06175 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NYR95_11295 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NYR95_14115 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NYR95_18980 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NYR95_21515 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NYR95_06195 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NYR95_02200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR95_06185 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR95_21545 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR95_18975 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D NYR95_08580 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NYR95_00760 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D NYR95_10860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:xdy00071]
D NYR95_01205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_08240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_11545 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D NYR95_08075 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR95_11550 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D NYR95_16025 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D NYR95_08915 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D NYR95_10860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NYR95_03870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NYR95_18570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:xdy00561]
D NYR95_23010 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NYR95_00160 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NYR95_06590 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NYR95_11615 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NYR95_11660 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NYR95_02060 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D NYR95_22440 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D NYR95_21580 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D NYR95_04955 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:xdy00564]
D NYR95_01255 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D NYR95_02070 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D NYR95_22440 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D NYR95_21580 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D NYR95_04955 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D NYR95_05810 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D NYR95_16680 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D NYR95_08870 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D NYR95_06295 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D NYR95_23045 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D NYR95_12810 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D NYR95_12815 eutC; ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D NYR95_00210 methyltransferase domain-containing protein K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D NYR95_10025 CDP-diacylglycerol diphosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D NYR95_03115 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D NYR95_08610 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D NYR95_12240 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D NYR95_18690 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D NYR95_14765 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D NYR95_03080 CDP-alcohol phosphatidyltransferase family protein K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D NYR95_11990 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D NYR95_02925 haloacid dehalogenase-like hydrolase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D NYR95_00080 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D NYR95_21910 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D NYR95_22715 phospholipase D-like domain-containing protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D NYR95_15495 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:xdy00565]
D NYR95_08870 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D NYR95_05810 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D NYR95_16680 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:xdy00600]
D NYR95_14100 glycosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D NYR95_06525 glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D NYR95_07625 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D NYR95_22365 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D NYR95_16130 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D NYR95_08870 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D NYR95_08870 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:xdy00592]
D NYR95_08870 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D NYR95_11545 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:xdy01040]
D NYR95_01030 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D NYR95_08420 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D NYR95_20805 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D NYR95_20810 ferredoxin reductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D NYR95_04935 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D NYR95_06910 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:xdy00230]
D NYR95_05245 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D NYR95_16095 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D NYR95_18765 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_20670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_05435 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NYR95_05840 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D NYR95_03065 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D NYR95_15910 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D NYR95_06880 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D NYR95_04280 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D NYR95_15895 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D NYR95_14490 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D NYR95_14495 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D NYR95_02815 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D NYR95_09145 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NYR95_03075 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NYR95_12930 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D NYR95_09455 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D NYR95_10085 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NYR95_16985 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NYR95_08160 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D NYR95_12375 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NYR95_11560 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NYR95_17875 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D NYR95_06600 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D NYR95_15590 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D NYR95_19610 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D NYR95_06605 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D NYR95_15595 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D NYR95_06610 2Fe-2S iron-sulfur cluster-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D NYR95_15600 paoA; aldehyde dehydrogenase iron-sulfur subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D NYR95_12370 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NYR95_22230 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NYR95_17855 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D NYR95_21460 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NYR95_21455 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D NYR95_17800 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NYR95_05885 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D NYR95_16410 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D NYR95_08135 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D NYR95_06380 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NYR95_03930 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20]
D NYR95_01775 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D NYR95_14460 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D NYR95_18080 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NYR95_16085 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NYR95_05000 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D NYR95_17380 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D NYR95_17385 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D NYR95_01685 hpyO; FAD-dependent urate hydroxylase HpyO K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113]
D NYR95_01680 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D NYR95_01690 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D NYR95_01700 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5]
D NYR95_01710 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D NYR95_01705 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00240 Pyrimidine metabolism [PATH:xdy00240]
D NYR95_10795 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NYR95_10785 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NYR95_15675 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D NYR95_12795 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D NYR95_10485 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D NYR95_20620 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D NYR95_22470 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D NYR95_08625 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D NYR95_11560 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NYR95_16085 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NYR95_15020 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D NYR95_08260 M48 family metallopeptidase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D NYR95_10040 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D NYR95_12435 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D NYR95_09455 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D NYR95_10085 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NYR95_13795 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D NYR95_14460 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D NYR95_03800 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D NYR95_14845 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D NYR95_21460 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NYR95_21455 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D NYR95_21095 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D NYR95_20675 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D NYR95_22550 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D NYR95_04985 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D NYR95_03300 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:xdy00250]
D NYR95_05350 asparaginase domain-containing protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D NYR95_01420 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D NYR95_03900 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NYR95_08705 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NYR95_08930 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NYR95_12545 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D NYR95_18450 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D NYR95_12755 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NYR95_12725 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NYR95_06380 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NYR95_09145 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NYR95_15675 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D NYR95_00585 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NYR95_13515 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NYR95_00175 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D NYR95_00170 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D NYR95_13675 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D NYR95_20555 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NYR95_01155 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_13565 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_13575 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_10795 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NYR95_10785 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NYR95_04205 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NYR95_19040 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NYR95_05840 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:xdy00260]
D NYR95_10580 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D NYR95_15645 bifunctional aspartate kinase/diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D NYR95_14735 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NYR95_15945 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D NYR95_10585 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D NYR95_10595 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D NYR95_02895 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D NYR95_04485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NYR95_14740 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D NYR95_23010 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D NYR95_15510 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NYR95_00110 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NYR95_10700 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NYR95_09675 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NYR95_05770 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D NYR95_05800 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D NYR95_18010 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D NYR95_06730 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D NYR95_16065 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NYR95_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_19170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_16060 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D NYR95_12240 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D NYR95_18690 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D NYR95_18645 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D NYR95_18640 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D NYR95_18895 pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D NYR95_18890 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D NYR95_15935 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D NYR95_02175 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NYR95_18185 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NYR95_10470 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D NYR95_14695 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D NYR95_14705 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:xdy00270]
D NYR95_17440 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NYR95_18995 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NYR95_18890 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D NYR95_18895 pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D NYR95_08480 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D NYR95_09255 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NYR95_09245 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NYR95_01865 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D NYR95_04840 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NYR95_02935 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D NYR95_09460 transferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D NYR95_20735 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D NYR95_16985 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NYR95_12865 TRZ/ATZ family hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D NYR95_08165 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D NYR95_09590 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D NYR95_10680 methylthioribulose 1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D NYR95_10670 mtnC; acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D NYR95_10675 acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D NYR95_00660 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D NYR95_18950 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D NYR95_16195 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NYR95_04795 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D NYR95_10580 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D NYR95_15645 bifunctional aspartate kinase/diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D NYR95_14735 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NYR95_15945 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D NYR95_12640 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D NYR95_15955 homoserine O-succinyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D NYR95_15950 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D NYR95_16865 aminotransferase class V-fold PLP-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D NYR95_05325 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NYR95_18605 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D NYR95_16365 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D NYR95_09395 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D NYR95_10470 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D NYR95_05715 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NYR95_15935 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D NYR95_00110 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NYR95_10700 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NYR95_09675 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:xdy00280]
D NYR95_05325 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NYR95_08250 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D NYR95_02690 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D NYR95_02685 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D NYR95_02675 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D NYR95_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_19170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_01505 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D NYR95_08075 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR95_11545 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D NYR95_07665 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D NYR95_07645 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NYR95_13615 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D NYR95_01495 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D NYR95_01500 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D NYR95_10740 enoyl-CoA hydratase-related protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D NYR95_10735 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D NYR95_18760 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D NYR95_18755 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D NYR95_01205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_08240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:xdy00290]
D NYR95_02175 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NYR95_18185 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NYR95_18215 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D NYR95_18210 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D NYR95_18200 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D NYR95_18175 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NYR95_18180 acetolactate synthase K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D NYR95_18170 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D NYR95_01995 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D NYR95_05325 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NYR95_08250 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D NYR95_18450 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D NYR95_18190 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:xdy00300]
D NYR95_15945 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D NYR95_10580 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D NYR95_15645 bifunctional aspartate kinase/diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D NYR95_14735 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NYR95_10260 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NYR95_10780 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D NYR95_08685 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D NYR95_18025 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NYR95_08700 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D NYR95_03775 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D NYR95_16790 type III PLP-dependent enzyme K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D NYR95_10765 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D NYR95_04650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NYR95_04655 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:xdy00310]
D NYR95_10500 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D NYR95_09120 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NYR95_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_19170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_08915 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D NYR95_08075 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR95_01205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_08240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_10470 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D NYR95_00585 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NYR95_13515 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NYR95_20355 VOC family protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:xdy00220]
D NYR95_12760 N-acetylornithine carbamoyltransferase K09065 argF; N-acetylornithine carbamoyltransferase [EC:2.1.3.9]
D NYR95_12755 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NYR95_12725 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NYR95_21065 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D NYR95_01155 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_13565 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_13575 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_10795 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NYR95_10785 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NYR95_13675 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D NYR95_18450 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D NYR95_12740 acetylglutamate kinase K22478 K22478; bifunctional N-acetylglutamate synthase/kinase [EC:2.3.1.1 2.7.2.8]
D NYR95_12730 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D NYR95_18025 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NYR95_12745 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:xdy00330]
D NYR95_03800 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D NYR95_20730 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D NYR95_12455 carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D NYR95_09460 transferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D NYR95_20735 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D NYR95_02935 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D NYR95_13560 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NYR95_18010 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D NYR95_05695 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NYR95_13580 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D NYR95_21065 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D NYR95_15730 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D NYR95_20555 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NYR95_12710 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NYR95_12705 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D NYR95_05235 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism [PATH:xdy00340]
D NYR95_10620 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D NYR95_10655 hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D NYR95_10645 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D NYR95_10640 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D NYR95_10650 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D NYR95_10635 hisB; bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D NYR95_09570 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_10630 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_17995 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_10625 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D NYR95_09625 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D NYR95_09615 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D NYR95_09630 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D NYR95_09635 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D NYR95_09620 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NYR95_18010 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D NYR95_01060 egtD; L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:xdy00350]
D NYR95_09570 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_10630 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_17995 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_00660 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D NYR95_02720 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D NYR95_02730 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D NYR95_18920 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D NYR95_18925 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D NYR95_18010 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D NYR95_03870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NYR95_18570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NYR95_16760 aldolase/citrate lyase family protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D NYR95_00585 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NYR95_13515 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NYR95_17260 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:xdy00360]
D NYR95_00995 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D NYR95_18010 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D NYR95_09570 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_10630 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_17995 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_00660 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D NYR95_02720 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D NYR95_19310 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D NYR95_07225 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D NYR95_05695 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NYR95_15800 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D NYR95_00930 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00380 Tryptophan metabolism [PATH:xdy00380]
D NYR95_02700 tryptophan 2,3-dioxygenase family protein K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D NYR95_07590 tryptophan 2,3-dioxygenase family protein K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D NYR95_09485 FAD-dependent monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D NYR95_09490 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D NYR95_09500 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
D NYR95_09120 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NYR95_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_19170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_08915 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D NYR95_08075 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR95_01205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_08240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_18010 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NYR95_05695 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NYR95_06715 catalase K03781 katE; catalase [EC:1.11.1.6]
D NYR95_20950 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D NYR95_21190 katB; catalase KatB K03781 katE; catalase [EC:1.11.1.6]
D NYR95_07225 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:xdy00400]
D NYR95_03230 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NYR95_05685 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NYR95_07800 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D NYR95_22175 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D NYR95_03170 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D NYR95_21235 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D NYR95_07805 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D NYR95_09685 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D NYR95_14745 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D NYR95_02890 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NYR95_02905 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D NYR95_02915 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D NYR95_14715 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D NYR95_02920 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D NYR95_14695 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D NYR95_14705 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D NYR95_19105 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D NYR95_09680 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D NYR95_09070 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D NYR95_03580 transporter substrate-binding domain-containing protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D NYR95_09570 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_10630 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_17995 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_00660 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D NYR95_00995 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D NYR95_21595 pteridine-dependent deoxygenase K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:xdy00410]
D NYR95_10400 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NYR95_10395 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D NYR95_13615 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D NYR95_08075 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR95_07645 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:xdy00430]
D NYR95_01765 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR95_13810 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR95_13675 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism [PATH:xdy00440]
D NYR95_03920 aepX; phosphoenolpyruvate mutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
D NYR95_03915 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
D NYR95_03895 phnY; phosphonoacetaldehyde dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-]
C 00450 Selenocompound metabolism [PATH:xdy00450]
D NYR95_15950 O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D NYR95_09255 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NYR95_09245 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NYR95_01865 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D NYR95_18890 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D NYR95_15790 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D NYR95_06555 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D NYR95_11510 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D NYR95_17380 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D NYR95_17385 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D NYR95_08455 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:xdy00460]
D NYR95_03210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_06585 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_08790 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_10425 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_16140 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_20445 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_22320 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_01765 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR95_13810 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR95_05350 asparaginase domain-containing protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D NYR95_01420 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D NYR95_04485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:xdy00470]
D NYR95_19305 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NYR95_01375 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NYR95_04680 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NYR95_10470 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D NYR95_20410 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D NYR95_03775 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D NYR95_16790 type III PLP-dependent enzyme K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D NYR95_15645 bifunctional aspartate kinase/diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D NYR95_13975 proline racemase family protein K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D NYR95_13960 NAD(P)/FAD-dependent oxidoreductase K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
D NYR95_13970 FAD-binding oxidoreductase K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-]
D NYR95_13965 (2Fe-2S)-binding protein K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma
D NYR95_13955 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D NYR95_13950 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D NYR95_17780 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D NYR95_19310 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:xdy00480]
D NYR95_01765 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR95_13810 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR95_18605 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D NYR95_16365 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D NYR95_04245 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NYR95_20935 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NYR95_00380 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_05165 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_05720 glutathione binding-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_08860 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_08925 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_12945 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_13465 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_16910 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_20230 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_14905 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D NYR95_20315 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NYR95_04045 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D NYR95_12110 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NYR95_21490 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NYR95_08835 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D NYR95_09195 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D NYR95_22925 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D NYR95_06340 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D NYR95_09460 transferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D NYR95_20735 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:xdy00511]
D NYR95_07625 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D NYR95_22365 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D NYR95_16130 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D NYR95_16135 glycoside hydrolase family 2 protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D NYR95_16120 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D NYR95_16275 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D NYR95_10330 glycoside hydrolase family 95 protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D NYR95_16295 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
D NYR95_06525 glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:xdy00540]
D NYR95_08575 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D NYR95_04700 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D NYR95_08585 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D NYR95_05870 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D NYR95_08570 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D NYR95_12020 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D NYR95_08045 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D NYR95_10045 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D NYR95_08040 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D NYR95_12010 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D NYR95_18245 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D NYR95_18250 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D NYR95_20080 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D NYR95_02190 lpxO; lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D NYR95_03980 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D NYR95_06775 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D NYR95_06060 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D NYR95_20120 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:xdy00541]
D NYR95_12400 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NYR95_09205 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NYR95_20650 SDR family NAD(P)-dependent oxidoreductase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D NYR95_18785 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NYR95_18790 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NYR95_18780 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NYR95_18775 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D NYR95_18770 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D NYR95_19090 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NYR95_11965 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C 00550 Peptidoglycan biosynthesis [PATH:xdy00550]
D NYR95_08055 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NYR95_10480 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NYR95_04675 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NYR95_15630 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K23169 murD2; UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:6.3.2.53]
D NYR95_15635 endonuclease domain-containing protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23]
D NYR95_04650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NYR95_01375 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NYR95_04680 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NYR95_04655 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NYR95_08615 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NYR95_01150 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NYR95_05875 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NYR95_04660 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NYR95_04670 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NYR95_15995 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D NYR95_17720 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NYR95_16395 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D NYR95_06330 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D NYR95_03950 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NYR95_04645 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NYR95_03975 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NYR95_06855 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:xdy00552]
D NYR95_01150 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NYR95_05875 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:xdy00543]
D NYR95_10530 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D NYR95_10525 pgaD; poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD
D NYR95_14155 glycosyltransferase family 4 protein K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252]
D NYR95_14140 glycosyltransferase family 1 protein K13659 gumK; 2-beta-glucuronyltransferase [EC:2.4.1.264]
D NYR95_14165 acyltransferase family protein K13663 gumF; acyltransferase [EC:2.3.1.-]
D NYR95_14175 undecaprenyl-phosphate glucose phosphotransferase K13656 gumD; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D NYR95_14130 WecB/TagA/CpsF family glycosyltransferase K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-]
D NYR95_14150 GDP-mannose--glycolipid 4-beta-D-mannosyltransferase K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251]
D NYR95_14160 acyltransferase family protein K13664 gumG; acyltransferase [EC:2.3.1.-]
D NYR95_14135 polysaccharide pyruvyl transferase family protein K13665 gumL; pyruvyltransferase
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:xdy00730]
D NYR95_18145 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D NYR95_10225 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D NYR95_14085 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NYR95_17235 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D NYR95_17970 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D NYR95_04545 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D NYR95_18420 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NYR95_14960 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NYR95_18080 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:xdy00740]
D NYR95_20090 ribA; GTP cyclohydrolase II RibA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NYR95_04530 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D NYR95_04500 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D NYR95_20930 HAD-IA family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D NYR95_04535 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D NYR95_04525 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D NYR95_06955 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D NYR95_04835 histidine-type phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D NYR95_06630 histidine-type phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D NYR95_23060 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D NYR95_05245 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:xdy00750]
D NYR95_07810 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D NYR95_09065 pdxY; pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D NYR95_21700 aldo/keto reductase family oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D NYR95_09675 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NYR95_05015 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D NYR95_00070 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D NYR95_10595 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:xdy00760]
D NYR95_14505 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D NYR95_04420 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D NYR95_09455 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D NYR95_10085 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NYR95_04010 bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-]
D NYR95_15070 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D NYR95_16085 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NYR95_03015 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D NYR95_17005 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D NYR95_10145 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D NYR95_04015 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
D NYR95_09450 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D NYR95_05285 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D NYR95_05305 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D NYR95_05310 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D NYR95_00585 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NYR95_13515 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:xdy00770]
D NYR95_18175 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NYR95_18180 acetolactate synthase K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D NYR95_18170 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D NYR95_01995 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D NYR95_10390 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D NYR95_21430 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D NYR95_10395 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D NYR95_21125 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D NYR95_20680 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D NYR95_16085 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NYR95_13825 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D NYR95_17105 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D NYR95_21990 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D NYR95_05325 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NYR95_10400 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:xdy00780]
D NYR95_02195 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D NYR95_09940 class I SAM-dependent methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D NYR95_18980 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NYR95_21515 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NYR95_06195 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NYR95_02200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR95_06185 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR95_21545 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR95_08580 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NYR95_02205 bioH; pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D NYR95_02220 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NYR95_16100 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D NYR95_18945 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D NYR95_02225 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D NYR95_21130 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:xdy00785]
D NYR95_03990 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D NYR95_03995 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D NYR95_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_19170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_03410 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NYR95_19180 dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NYR95_09125 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D NYR95_09120 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NYR95_02690 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D NYR95_02685 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D NYR95_02675 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D NYR95_06730 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D NYR95_16065 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NYR95_16060 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:xdy00790]
D NYR95_22670 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D NYR95_10370 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D NYR95_14960 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NYR95_21985 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D NYR95_20450 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D NYR95_04080 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D NYR95_10385 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D NYR95_10125 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D NYR95_04995 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D NYR95_05825 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D NYR95_20090 ribA; GTP cyclohydrolase II RibA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NYR95_04530 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D NYR95_06200 aminodeoxychorismate synthase component I K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D NYR95_18935 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D NYR95_11910 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D NYR95_00995 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D NYR95_04085 pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D NYR95_16570 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D NYR95_16565 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D NYR95_20330 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D NYR95_06070 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D NYR95_06080 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D NYR95_06090 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D NYR95_05390 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D NYR95_11595 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D NYR95_11680 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D NYR95_15575 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D NYR95_11685 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:xdy00670]
D NYR95_04995 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D NYR95_12380 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D NYR95_04485 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NYR95_15910 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D NYR95_03075 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NYR95_20135 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D NYR95_16065 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NYR95_09255 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NYR95_09245 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NYR95_04985 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D NYR95_01850 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D NYR95_04740 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D NYR95_17935 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:xdy00860]
D NYR95_15395 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NYR95_05410 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D NYR95_17980 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D NYR95_21250 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D NYR95_03705 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D NYR95_01225 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D NYR95_07790 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D NYR95_21625 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D NYR95_22495 STM4012 family radical SAM protein K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D NYR95_08535 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D NYR95_22265 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D NYR95_01220 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D NYR95_17435 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D NYR95_11695 SAM-dependent methyltransferase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D NYR95_20500 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NYR95_20505 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D NYR95_05035 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D NYR95_16840 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D NYR95_16825 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D NYR95_16835 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D NYR95_16830 cobD; threonine-phosphate decarboxylase CobD K02225 cobC1; cobalamin biosynthesis protein CobC
D NYR95_16820 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D NYR95_16805 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D NYR95_16815 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D NYR95_02980 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D NYR95_06335 ferritin-like domain-containing protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
D NYR95_08730 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:xdy00130]
D NYR95_21595 pteridine-dependent deoxygenase K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D NYR95_02235 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D NYR95_12860 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D NYR95_05045 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D NYR95_03825 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D NYR95_05050 UbiH/UbiF family hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D NYR95_02945 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D NYR95_01120 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D NYR95_05360 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D NYR95_19440 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D NYR95_01930 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D NYR95_02720 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:xdy00900]
D NYR95_14085 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NYR95_08605 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D NYR95_10065 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D NYR95_05425 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D NYR95_10070 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D NYR95_10455 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D NYR95_06970 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D NYR95_01205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_08240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_14975 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D NYR95_15620 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D NYR95_08615 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:xdy00903]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NYR95_03205 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:xdy00907]
D NYR95_08075 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR95_18050 NAD(P)-dependent oxidoreductase K13775 atuG; citronellol/citronellal dehydrogenase
D NYR95_10735 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D NYR95_11545 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D NYR95_17650 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:xdy00523]
D NYR95_18785 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NYR95_18790 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NYR95_18780 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NYR95_18775 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:xdy01053]
D NYR95_20725 amino acid adenylation domain-containing protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
C 01055 Biosynthesis of vancomycin group antibiotics
D NYR95_18790 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:xdy00946]
D NYR95_03210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_06585 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_08790 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_10425 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_16140 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_20445 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_22320 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids [PATH:xdy00996]
D NYR95_05100 p-hydroxycinnamoyl CoA hydratase/lyase K18383 ferB; feruloyl-CoA hydratase/lyase [EC:4.1.2.61]
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:xdy00311]
D NYR95_07600 aminotransferase class V-fold PLP-dependent enzyme K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
D NYR95_00295 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D NYR95_08725 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D NYR95_16690 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:xdy00332]
D NYR95_12710 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NYR95_12705 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:xdy00261]
D NYR95_17380 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D NYR95_17385 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D NYR95_10580 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D NYR95_15645 bifunctional aspartate kinase/diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D NYR95_14735 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NYR95_10260 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NYR95_10780 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:xdy00521]
D NYR95_12115 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_16110 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_16455 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_18765 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_20670 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D NYR95_12900 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NYR95_18785 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NYR95_18790 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NYR95_18780 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NYR95_18775 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D NYR95_12115 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_16110 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D NYR95_16455 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:xdy00525]
D NYR95_18785 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NYR95_18790 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:xdy00401]
D NYR95_09070 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D NYR95_09570 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_10630 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_17995 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_00660 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
D NYR95_07890 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D NYR95_21300 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D NYR95_22465 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
C 00405 Phenazine biosynthesis
D NYR95_02890 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NYR95_02905 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D NYR95_03355 mdcH; malonate decarboxylase subunit epsilon K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NYR95_06180 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NYR95_02200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR95_06185 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR95_21545 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:xdy00998]
D NYR95_06190 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D NYR95_21590 xanC; xanthomonadin biosynthesis acyl carrier protein XanC K02078 acpP; acyl carrier protein
D NYR95_03920 aepX; phosphoenolpyruvate mutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
D NYR95_03915 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:xdy00999]
D NYR95_04840 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NYR95_21235 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D NYR95_03210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_06585 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_08790 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_10425 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_16140 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_20445 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NYR95_22320 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:xdy00362]
D NYR95_02125 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D NYR95_11545 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D NYR95_02105 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D NYR95_00930 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D NYR95_02115 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D NYR95_02110 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D NYR95_02120 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D NYR95_02130 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D NYR95_11665 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D NYR95_21925 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D NYR95_21930 amidohydrolase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D NYR95_21920 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D NYR95_02050 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D NYR95_08075 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D NYR95_11550 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D NYR95_08915 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D NYR95_01205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_08240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:xdy00627]
D NYR95_05695 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NYR95_05375 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D NYR95_02040 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D NYR95_02090 aromatic ring-hydroxylating dioxygenase subunit alpha K03862 vanA; vanillate monooxygenase [EC:1.14.13.82]
D NYR95_02080 PDR/VanB family oxidoreductase K03863 vanB; vanillate monooxygenase ferredoxin subunit
C 00364 Fluorobenzoate degradation [PATH:xdy00364]
D NYR95_14825 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:xdy00625]
D NYR95_03870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NYR95_18570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NYR95_05095 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:xdy00361]
D NYR95_14825 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:xdy00623]
D NYR95_02040 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D NYR95_14825 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:xdy00622]
D NYR95_02040 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D NYR95_00930 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00633 Nitrotoluene degradation [PATH:xdy00633]
D NYR95_08335 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D NYR95_11545 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:xdy00643]
D NYR95_02730 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D NYR95_18920 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D NYR95_18925 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D NYR95_05695 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NYR95_02095 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D NYR95_02100 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:xdy00930]
D NYR95_03255 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D NYR95_22355 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D NYR95_03205 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D NYR95_08075 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D NYR95_00930 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00626 Naphthalene degradation [PATH:xdy00626]
D NYR95_03870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NYR95_18570 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D NYR95_02115 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D NYR95_02110 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:xdy03020]
D NYR95_05510 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NYR95_05515 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NYR95_05665 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NYR95_17850 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:xdy03010]
D NYR95_12430 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D NYR95_08640 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NYR95_05575 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D NYR95_05660 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NYR95_05630 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NYR95_09540 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NYR95_05525 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NYR95_05615 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NYR95_02955 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NYR95_05540 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NYR95_05655 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NYR95_05520 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D NYR95_05650 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NYR95_05610 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D NYR95_14520 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D NYR95_07195 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NYR95_05590 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NYR95_09545 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D NYR95_05565 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NYR95_06945 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NYR95_20460 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NYR95_05495 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NYR95_05560 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NYR95_05545 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NYR95_05550 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NYR95_05605 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NYR95_05620 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NYR95_05505 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NYR95_09550 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NYR95_05500 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NYR95_05490 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NYR95_02950 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NYR95_05595 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NYR95_05640 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NYR95_05580 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NYR95_05670 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NYR95_05625 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D NYR95_07210 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NYR95_14215 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NYR95_06930 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NYR95_05570 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NYR95_05555 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D NYR95_05600 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NYR95_05440 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D NYR95_06935 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NYR95_21940 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NYR95_05585 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NYR95_05635 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D NYR95_17735 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NYR95_06170 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NYR95_21935 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D NYR95_23095 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D NYR95_14220 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D NYR95_12440 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D NYR95_20580 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR95_22595 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR95_22580 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR95_20565 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR95_22575 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR95_20560 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:xdy00970]
D NYR95_13065 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR95_12160 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR95_12175 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR95_20575 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR95_22590 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR95_10210 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR95_10215 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR95_10505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR95_05935 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR95_02240 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR95_14420 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NYR95_06000 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NYR95_06005 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NYR95_11980 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D NYR95_02960 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NYR95_05430 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NYR95_10375 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NYR95_12165 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NYR95_12180 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NYR95_17220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR95_05460 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR95_11975 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR95_11985 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR95_05940 tRNA-His K14226 tRNA-His; tRNA His
D NYR95_20570 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR95_22585 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR95_05965 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR95_08785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR95_09280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR95_11970 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR95_12190 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR95_14625 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR95_05945 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NYR95_16560 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NYR95_02965 tRNA-Met K14230 tRNA-Met; tRNA Met
D NYR95_20060 tRNA-Ile K14230 tRNA-Met; tRNA Met
D NYR95_14550 tRNA-Met K14230 tRNA-Met; tRNA Met
D NYR95_14060 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D NYR95_05930 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NYR95_12680 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NYR95_14190 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NYR95_06100 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR95_09715 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR95_06045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR95_10185 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR95_05465 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NYR95_06975 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NYR95_21115 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NYR95_05475 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NYR95_05455 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D NYR95_05995 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR95_06220 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR95_14405 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR95_15395 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NYR95_01770 AtzE family amidohydrolase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NYR95_05160 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D NYR95_10175 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NYR95_16655 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NYR95_09530 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D NYR95_22215 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NYR95_22210 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NYR95_14230 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NYR95_09700 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NYR95_12770 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NYR95_08455 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NYR95_20135 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D NYR95_04230 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NYR95_15085 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NYR95_06960 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NYR95_10835 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NYR95_20690 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NYR95_18700 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NYR95_10610 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NYR95_14210 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NYR95_14205 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NYR95_20585 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NYR95_21045 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:xdy03060]
D NYR95_05645 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NYR95_05480 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NYR95_14630 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NYR95_13745 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NYR95_13740 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NYR95_13750 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NYR95_23085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NYR95_04715 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NYR95_01250 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NYR95_07175 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NYR95_06095 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D NYR95_13985 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NYR95_22255 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D NYR95_22250 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D NYR95_22245 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D NYR95_08100 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NYR95_06965 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:xdy04122]
D NYR95_09395 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D NYR95_11475 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D NYR95_06090 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D NYR95_06070 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D NYR95_06085 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D NYR95_06080 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D NYR95_05390 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D NYR95_17230 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:xdy03018]
D NYR95_02970 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D NYR95_11935 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D NYR95_20280 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D NYR95_10055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NYR95_14515 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NYR95_18930 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D NYR95_09285 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NYR95_15205 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NYR95_16480 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NYR95_20290 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D NYR95_09055 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NYR95_03195 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NYR95_10135 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D NYR95_05890 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D NYR95_05385 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D NYR95_10380 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:xdy03030]
D NYR95_06035 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR95_08560 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NYR95_06105 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NYR95_06210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NYR95_15075 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NYR95_04235 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NYR95_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NYR95_08940 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NYR95_13260 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NYR95_20475 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NYR95_15615 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR95_06030 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NYR95_08565 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NYR95_21630 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NYR95_09575 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:xdy03410]
D NYR95_09370 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NYR95_20260 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D NYR95_13995 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D NYR95_22570 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NYR95_03625 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D NYR95_06850 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D NYR95_15240 helix-turn-helix domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D NYR95_15695 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D NYR95_19415 UdgX family uracil-DNA binding protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D NYR95_20615 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NYR95_22005 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NYR95_21630 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NYR95_10810 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NYR95_09575 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:xdy03420]
D NYR95_15450 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NYR95_06575 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D NYR95_06925 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D NYR95_14410 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D NYR95_11995 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D NYR95_11070 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NYR95_21895 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NYR95_21630 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NYR95_09575 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:xdy03430]
D NYR95_07235 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D NYR95_13015 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D NYR95_11070 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NYR95_21895 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NYR95_09480 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D NYR95_13040 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NYR95_14970 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NYR95_10810 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NYR95_15615 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR95_08560 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NYR95_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NYR95_06105 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NYR95_15075 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NYR95_06210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NYR95_06035 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR95_04235 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NYR95_09575 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NYR95_03415 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NYR95_13360 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:xdy03440]
D NYR95_10810 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NYR95_15615 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR95_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D NYR95_08120 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D NYR95_06115 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D NYR95_10165 recA; recombinase RecA K03553 recA; recombination protein RecA
D NYR95_21630 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NYR95_16625 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NYR95_16610 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NYR95_16630 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NYR95_06455 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NYR95_17745 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NYR95_22845 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D NYR95_22850 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D NYR95_22840 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D NYR95_08560 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NYR95_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NYR95_06105 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NYR95_15075 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NYR95_06210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NYR95_06035 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR95_04235 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NYR95_20225 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:xdy03450]
D NYR95_00700 Ku protein K10979 ku; DNA end-binding protein Ku
D NYR95_00705 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:xdy02010]
D NYR95_05775 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D NYR95_05780 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D NYR95_05785 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D NYR95_05790 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D NYR95_04915 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D NYR95_16885 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D NYR95_04905 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D NYR95_16880 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D NYR95_04910 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D NYR95_16875 ATP-binding cassette domain-containing protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D NYR95_17540 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D NYR95_17545 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D NYR95_17550 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D NYR95_18355 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D NYR95_13555 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D NYR95_13520 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D NYR95_13525 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D NYR95_13530 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D NYR95_01045 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D NYR95_01040 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D NYR95_17835 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D NYR95_12105 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D NYR95_17815 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D NYR95_17825 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D NYR95_17830 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D NYR95_22900 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D NYR95_18725 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NYR95_22895 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NYR95_18715 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NYR95_22890 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NYR95_22905 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D NYR95_18720 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NYR95_22885 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NYR95_09335 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D NYR95_09340 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D NYR95_09330 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D NYR95_09325 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D NYR95_09320 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NYR95_19205 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D NYR95_19210 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D NYR95_19215 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D NYR95_18885 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D NYR95_18880 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D NYR95_21315 ABC transporter permease K09696 natB; sodium transport system permease protein
D NYR95_21320 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D NYR95_12055 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D NYR95_12050 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D NYR95_09835 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D NYR95_12570 heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D NYR95_09840 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D NYR95_12565 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C
D NYR95_12560 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D NYR95_12555 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D NYR95_04250 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D NYR95_04255 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D NYR95_08025 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D NYR95_20270 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NYR95_20275 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NYR95_12025 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D NYR95_18445 type I secretion system permease/ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NYR95_06750 raxB; peptidase domain-containing ABC transporter RaxB K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NYR95_18340 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NYR95_21210 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NYR95_15150 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D NYR95_12650 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D NYR95_12655 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D NYR95_00225 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:xdy02060]
D NYR95_07985 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D NYR95_07990 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D NYR95_07995 PTS fructose IIA subunit family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D NYR95_13705 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D NYR95_13715 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D NYR95_13710 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D NYR95_08010 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:xdy03070]
D NYR95_18240 TolC family outer membrane protein K12340 tolC; outer membrane protein
D NYR95_18440 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D NYR95_18445 type I secretion system permease/ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NYR95_02295 sctC; type III secretion system outer membrane ring subunit SctC K03219 yscC; type III secretion protein C
D NYR95_02325 sctJ; type III secretion inner membrane ring lipoprotein SctJ K03222 yscJ; type III secretion protein J
D NYR95_02365 sctR; type III secretion system export apparatus subunit SctR K03226 yscR; type III secretion protein R
D NYR95_02370 sctS; type III secretion system export apparatus subunit SctS K03227 yscS; type III secretion protein S
D NYR95_02300 sctT; type III secretion system export apparatus subunit SctT K03228 yscT; type III secretion protein T
D NYR95_02340 sctU; type III secretion system export apparatus subunit SctU K03229 yscU; type III secretion protein U
D NYR95_02345 FHIPEP family type III secretion protein K03230 yscV; type III secretion protein V
D NYR95_02310 sctN; type III secretion system ATPase SctN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D NYR95_02360 sctQ; type III secretion system cytoplasmic ring protein SctQ K03225 yscQ; type III secretion protein Q
D NYR95_02315 sctL; type III secretion system stator protein SctL K03223 yscL; type III secretion protein L
D NYR95_04135 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D NYR95_04360 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D NYR95_04130 PDZ domain-containing protein K02452 gspC; general secretion pathway protein C
D NYR95_04145 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D NYR95_04315 type II secretion system F family protein K02455 gspF; general secretion pathway protein F
D NYR95_04150 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D NYR95_04320 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D NYR95_04155 GspH/FimT family pseudopilin K02457 gspH; general secretion pathway protein H
D NYR95_04325 GspH/FimT family pseudopilin K02457 gspH; general secretion pathway protein H
D NYR95_04160 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D NYR95_04330 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I
D NYR95_04165 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D NYR95_04335 type II secretion system protein J K02459 gspJ; general secretion pathway protein J
D NYR95_04170 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D NYR95_04340 type II secretion system protein GspK K02460 gspK; general secretion pathway protein K
D NYR95_04175 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D NYR95_04345 PilN domain-containing protein K02461 gspL; general secretion pathway protein L
D NYR95_04180 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D NYR95_04350 gspM; type II secretion system protein GspM K02462 gspM; general secretion pathway protein M
D NYR95_04140 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D NYR95_04310 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D NYR95_22220 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D NYR95_13745 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NYR95_13740 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NYR95_05480 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NYR95_14630 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NYR95_05645 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NYR95_13750 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NYR95_23085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NYR95_04715 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NYR95_13985 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NYR95_01250 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NYR95_07175 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NYR95_22255 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D NYR95_22250 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D NYR95_22245 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D NYR95_14360 lytic transglycosylase domain-containing protein K03194 virB1; type IV secretion system protein VirB1
D NYR95_14355 TrbC/VirB2 family protein K03197 virB2; type IV secretion system protein VirB2
D NYR95_14350 VirB3 family type IV secretion system protein K03198 virB3; type IV secretion system protein VirB3
D NYR95_14340 hypothetical protein K03200 virB5; type IV secretion system protein VirB5
D NYR95_14375 TrbG/VirB9 family P-type conjugative transfer protein K03204 virB9; type IV secretion system protein VirB9
D NYR95_14305 hypothetical protein K03201 virB6; type IV secretion system protein VirB6
D NYR95_14335 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D NYR95_14380 VirB8/TrbF family protein K03203 virB8; type IV secretion system protein VirB8
D NYR95_14370 hypothetical protein K03195 virB10; type IV secretion system protein VirB10
D NYR95_14345 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D NYR95_14365 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D NYR95_14390 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D NYR95_21720 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D NYR95_21865 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D NYR95_21680 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D NYR95_21685 icmH; type IVB secretion system protein IcmH/DotU K11892 impK; type VI secretion system protein ImpK
D NYR95_21840 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:xdy02020]
D NYR95_05895 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NYR95_05900 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D NYR95_14960 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NYR95_21985 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D NYR95_09335 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D NYR95_09340 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D NYR95_21155 sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D NYR95_21160 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D NYR95_23060 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D NYR95_08090 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D NYR95_15430 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D NYR95_15435 creB; two-component system response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D NYR95_20340 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D NYR95_20345 efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D NYR95_20350 efflux RND transporter permease subunit K07789 mdtC; multidrug efflux pump
D NYR95_00215 efflux transporter outer membrane subunit K18323 smeC; outer membrane protein, multidrug efflux system
D NYR95_17570 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D NYR95_17575 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D NYR95_11350 flagellin K02406 fliC; flagellin
D NYR95_11135 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D NYR95_11055 flagellar motor protein K02556 motA; chemotaxis protein MotA
D NYR95_19335 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D NYR95_04575 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D NYR95_04580 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D NYR95_04560 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D NYR95_04565 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D NYR95_04570 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D NYR95_18360 sensor histidine kinase N-terminal domain-containing protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D NYR95_18365 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD
D NYR95_20505 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D NYR95_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NYR95_08375 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D NYR95_20395 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NYR95_06855 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D NYR95_03695 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D NYR95_03700 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D NYR95_21320 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D NYR95_21315 ABC transporter permease K09696 natB; sodium transport system permease protein
D NYR95_11940 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D NYR95_07930 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D NYR95_10180 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D NYR95_16040 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D NYR95_20975 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D NYR95_20970 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D NYR95_08655 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D NYR95_08670 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D NYR95_08645 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D NYR95_08665 molecular chaperone K07346 fimC; fimbrial chaperone protein
D NYR95_08660 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D NYR95_08680 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D NYR95_01160 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D NYR95_20765 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D NYR95_01170 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D NYR95_01175 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D NYR95_01155 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_13565 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_13575 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_01205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_08240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_18285 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D NYR95_17025 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D NYR95_17035 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D NYR95_08020 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D NYR95_11320 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D NYR95_17080 pilin K02650 pilA; type IV pilus assembly protein PilA
D NYR95_17090 pilin K02650 pilA; type IV pilus assembly protein PilA
D NYR95_20160 pilin K02650 pilA; type IV pilus assembly protein PilA
D NYR95_07100 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NYR95_10910 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NYR95_15480 SAM-dependent methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NYR95_01660 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_01945 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_03660 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_07615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_09770 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10190 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10940 Cache 3/Cache 2 fusion domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10945 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10950 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10955 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10960 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10985 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10990 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11015 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11020 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_12340 Cache 3/Cache 2 fusion domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_13405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_15465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_16510 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_16970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_18160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11040 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D NYR95_10930 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D NYR95_13400 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D NYR95_15470 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D NYR95_11025 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_11120 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_15460 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_11030 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NYR95_11130 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NYR95_07095 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NYR95_10900 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NYR95_15485 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NYR95_11415 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D NYR95_16345 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D NYR95_16350 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D NYR95_16340 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D NYR95_16360 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D NYR95_06355 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D NYR95_16355 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D NYR95_16335 chemotaxis protein K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D NYR95_16330 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC
D NYR95_09795 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D NYR95_11310 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D NYR95_10850 ATP-binding protein K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D NYR95_02930 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NYR95_10855 crotonase/enoyl-CoA hydratase family protein K13816 rpfF; DSF synthase
D NYR95_10450 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D NYR95_10445 response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D NYR95_13450 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D NYR95_13445 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D NYR95_13440 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D NYR95_09865 c-type cytochrome K08738 CYC; cytochrome c
D NYR95_07960 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NYR95_12665 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NYR95_19530 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NYR95_07965 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NYR95_12670 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NYR95_19535 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NYR95_12675 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D NYR95_18240 TolC family outer membrane protein K12340 tolC; outer membrane protein
D NYR95_14185 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D NYR95_12005 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D NYR95_00785 pectinesterase family protein K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D NYR95_12840 putative acyl-CoA thioester hydrolase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D NYR95_00140 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NYR95_00150 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NYR95_00155 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NYR95_03665 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NYR95_13800 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NYR95_17290 glycoside hydrolase family 6 protein K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D NYR95_06620 FecR domain-containing protein K07165 fecR; transmembrane sensor
D NYR95_11425 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:xdy04148]
D NYR95_21065 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D NYR95_13450 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:xdy02024]
D NYR95_10135 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D NYR95_02890 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NYR95_02905 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D NYR95_03230 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NYR95_05685 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NYR95_17570 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D NYR95_17575 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D NYR95_04580 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D NYR95_07930 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D NYR95_07940 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D NYR95_18670 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D NYR95_18675 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D NYR95_10855 crotonase/enoyl-CoA hydratase family protein K13816 rpfF; DSF synthase
D NYR95_02790 M4 family metallopeptidase K20273 zmpA; zinc metalloprotease ZmpA
D NYR95_10860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NYR95_10850 ATP-binding protein K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D NYR95_02930 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NYR95_15390 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D NYR95_04400 hypothetical protein K20326 xagA; protein XagA
D NYR95_04405 glycosyltransferase K20327 xagB; glycosyltransferase XagB
D NYR95_04410 hypothetical protein K20328 xagC; membrane protein XagC
D NYR95_10440 glycoside hydrolase family 5 protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D NYR95_20090 ribA; GTP cyclohydrolase II RibA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NYR95_04500 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D NYR95_15370 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D NYR95_23085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NYR95_04305 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_05330 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_05335 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_05340 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_19370 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_05480 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NYR95_14630 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NYR95_05645 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NYR95_13750 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NYR95_04715 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NYR95_13985 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NYR95_01250 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NYR95_07175 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NYR95_05810 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D NYR95_16680 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:xdy02030]
D NYR95_01660 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_01945 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_03660 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_07615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_09770 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10190 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10940 Cache 3/Cache 2 fusion domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10945 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10950 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10955 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10960 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10985 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10990 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11015 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11020 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_12340 Cache 3/Cache 2 fusion domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_13405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_15465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_16510 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_16970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_18160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11025 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_11120 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_15460 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_11040 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D NYR95_10930 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D NYR95_13400 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D NYR95_15470 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D NYR95_11030 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NYR95_11130 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NYR95_11125 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D NYR95_07095 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NYR95_10900 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NYR95_15485 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NYR95_11415 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D NYR95_10905 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D NYR95_07100 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NYR95_10910 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NYR95_15480 SAM-dependent methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NYR95_11240 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D NYR95_11210 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D NYR95_11205 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D NYR95_11055 flagellar motor protein K02556 motA; chemotaxis protein MotA
D NYR95_19335 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D NYR95_11050 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D NYR95_19340 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:xdy02040]
D NYR95_11250 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D NYR95_11245 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D NYR95_11240 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D NYR95_11235 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D NYR95_11230 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D NYR95_11225 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D NYR95_11220 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D NYR95_11215 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D NYR95_11210 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D NYR95_11205 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D NYR95_11200 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D NYR95_11195 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D NYR95_11185 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D NYR95_11180 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D NYR95_11150 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D NYR95_11155 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D NYR95_11420 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D NYR95_11410 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D NYR95_11405 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D NYR95_11400 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D NYR95_11395 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D NYR95_11390 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D NYR95_11380 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D NYR95_11375 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D NYR95_11370 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D NYR95_11365 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D NYR95_11360 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D NYR95_11355 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D NYR95_11350 flagellin K02406 fliC; flagellin
D NYR95_11345 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D NYR95_11340 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D NYR95_11055 flagellar motor protein K02556 motA; chemotaxis protein MotA
D NYR95_19335 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D NYR95_11050 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D NYR95_19340 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D NYR95_11425 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D NYR95_16155 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D NYR95_20070 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D NYR95_11310 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D NYR95_08020 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D NYR95_11320 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D NYR95_11135 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D NYR95_10055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:xdy04980]
D NYR95_05035 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D NYR95_09255 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NYR95_09245 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:xdy01501]
D NYR95_18320 ABC transporter permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NYR95_20605 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NYR95_08155 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NYR95_16695 ampR; LysR family transcriptional regulator AmpR K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D NYR95_16040 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D NYR95_00335 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D NYR95_17560 TonB family protein K02172 blaR1; bla regulator protein blaR1
D NYR95_17565 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D NYR95_16690 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D NYR95_13685 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_15380 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_17375 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_13690 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR95_17370 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR95_15375 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR95_15370 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D NYR95_18240 TolC family outer membrane protein K12340 tolC; outer membrane protein
D NYR95_17720 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NYR95_03950 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NYR95_04645 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:xdy01502]
D NYR95_20395 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NYR95_01375 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NYR95_04680 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NYR95_19305 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NYR95_04655 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NYR95_04660 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NYR95_04670 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NYR95_06855 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:xdy01503]
D NYR95_21155 sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D NYR95_21160 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D NYR95_06775 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D NYR95_10365 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NYR95_13020 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NYR95_08090 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D NYR95_18620 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D NYR95_18625 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D NYR95_13685 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_15380 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_17375 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_13690 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR95_17370 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR95_15375 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR95_18240 TolC family outer membrane protein K12340 tolC; outer membrane protein
D NYR95_08575 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D NYR95_08375 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:xdy01000]
C 01001 Protein kinases [BR:xdy01001]
D NYR95_02145 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D NYR95_00755 winged helix-turn-helix domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D NYR95_21735 serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D NYR95_01065 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D NYR95_07050 ATP-binding protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D NYR95_05895 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NYR95_21155 sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D NYR95_15430 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D NYR95_17570 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D NYR95_04575 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D NYR95_18360 sensor histidine kinase N-terminal domain-containing protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D NYR95_18600 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D NYR95_20975 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D NYR95_03695 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D NYR95_01170 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D NYR95_17025 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D NYR95_11025 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_11120 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_15460 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_16340 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D NYR95_10850 ATP-binding protein K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D NYR95_10450 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:xdy01009]
D NYR95_04795 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D NYR95_07025 ATP-binding protein K04079 HSP90A; molecular chaperone HtpG
D NYR95_13835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D NYR95_06040 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:xdy01002]
D NYR95_06965 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D NYR95_17100 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D NYR95_12370 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NYR95_22230 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NYR95_13570 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D NYR95_06750 raxB; peptidase domain-containing ABC transporter RaxB K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NYR95_18340 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NYR95_21210 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NYR95_14935 C40 family peptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D NYR95_05840 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D NYR95_00175 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D NYR95_04205 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NYR95_19040 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NYR95_03900 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NYR95_08705 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NYR95_08930 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NYR95_15760 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D NYR95_00025 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D NYR95_03490 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D NYR95_13725 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D NYR95_06770 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D NYR95_18990 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D NYR95_01425 dcp; peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D NYR95_01430 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D NYR95_08830 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D NYR95_02790 M4 family metallopeptidase K20273 zmpA; zinc metalloprotease ZmpA
D NYR95_14870 peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D NYR95_14875 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D NYR95_14880 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D NYR95_14885 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D NYR95_15500 peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D NYR95_19455 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D NYR95_06855 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D NYR95_20395 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NYR95_07580 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D NYR95_03650 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D NYR95_04245 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NYR95_20935 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NYR95_07950 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D NYR95_23015 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D NYR95_08700 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D NYR95_01710 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D NYR95_15740 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D NYR95_17630 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D NYR95_08675 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D NYR95_19700 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D NYR95_13945 Xaa-Pro peptidase family protein K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D NYR95_17895 pepQ; Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D NYR95_17910 aminopeptidase P N-terminal domain-containing protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D NYR95_14980 M35 family metallo-endopeptidase K08646 MEP; peptidyl-Lys metalloendopeptidase [EC:3.4.24.20]
D NYR95_10120 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NYR95_12985 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D NYR95_05905 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D NYR95_08600 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D NYR95_00335 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D NYR95_17560 TonB family protein K02172 blaR1; bla regulator protein blaR1
D NYR95_05860 zinc-dependent metalloprotease K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33]
D NYR95_21140 zinc-dependent peptidase K09933 mtfA; MtfA peptidase
D NYR95_08090 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D NYR95_20905 Do family serine endopeptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D NYR95_07920 trypsin-like peptidase domain-containing protein K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50]
D NYR95_04305 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_05330 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_05335 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_05340 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_19370 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_03740 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D NYR95_21275 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D NYR95_03760 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D NYR95_03975 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NYR95_05975 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D NYR95_05985 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D NYR95_06655 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D NYR95_10160 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D NYR95_08100 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NYR95_05235 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D NYR95_00115 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D NYR95_04000 carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D NYR95_00295 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D NYR95_08725 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D NYR95_20200 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D NYR95_13900 S53 family peptidase K08677 kscP; kumamolisin [EC:3.4.21.123]
D NYR95_14890 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D NYR95_03790 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D NYR95_01420 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D NYR95_01765 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR95_13810 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NYR95_14990 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein
D NYR95_00630 TldD/PmbA family protein K03568 tldD; TldD protein
D NYR95_00635 TldD/PmbA family protein K03568 tldD; TldD protein
D NYR95_15000 tldD; metalloprotease TldD K03568 tldD; TldD protein
D NYR95_06270 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin
D NYR95_06365 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D NYR95_06360 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:xdy01003]
D NYR95_14100 glycosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D NYR95_02560 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D NYR95_04435 bcsA; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D NYR95_15995 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D NYR95_06330 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D NYR95_16395 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D NYR95_17720 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NYR95_03685 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D NYR95_00290 cyclic beta 1-2 glucan synthetase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D NYR95_04405 glycosyltransferase K20327 xagB; glycosyltransferase XagB
D NYR95_14175 undecaprenyl-phosphate glucose phosphotransferase K13656 gumD; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D NYR95_14130 WecB/TagA/CpsF family glycosyltransferase K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-]
D NYR95_14155 glycosyltransferase family 4 protein K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252]
D NYR95_14140 glycosyltransferase family 1 protein K13659 gumK; 2-beta-glucuronyltransferase [EC:2.4.1.264]
D NYR95_14150 GDP-mannose--glycolipid 4-beta-D-mannosyltransferase K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251]
D NYR95_10530 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D NYR95_16955 otsA; alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:xdy01005]
D NYR95_08575 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D NYR95_08570 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D NYR95_04700 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D NYR95_08585 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D NYR95_05870 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D NYR95_12020 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D NYR95_18250 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D NYR95_20080 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D NYR95_02190 lpxO; lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D NYR95_03980 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D NYR95_18245 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D NYR95_06775 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D NYR95_06060 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D NYR95_10045 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D NYR95_12010 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D NYR95_08040 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D NYR95_08045 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D NYR95_20120 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D NYR95_06055 glycosyltransferase family 9 protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D NYR95_15990 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:xdy01011]
D NYR95_08055 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NYR95_10480 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NYR95_04675 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NYR95_04650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NYR95_01375 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NYR95_04680 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NYR95_19305 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NYR95_04660 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NYR95_04670 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NYR95_01150 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NYR95_05875 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NYR95_06950 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D NYR95_17720 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NYR95_16395 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D NYR95_06330 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D NYR95_03950 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NYR95_04645 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NYR95_03975 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NYR95_15995 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D NYR95_20395 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NYR95_06855 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D NYR95_14935 C40 family peptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D NYR95_15740 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D NYR95_17630 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D NYR95_07580 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D NYR95_18665 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D NYR95_03965 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D NYR95_16700 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D NYR95_06015 transglycosylase SLT domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D NYR95_14780 transglycosylase SLT domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D NYR95_06205 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D NYR95_03970 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D NYR95_10365 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NYR95_13020 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:xdy01004]
D NYR95_03355 mdcH; malonate decarboxylase subunit epsilon K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NYR95_06180 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NYR95_06175 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NYR95_11295 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NYR95_14115 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NYR95_18980 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NYR95_21515 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D NYR95_06195 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NYR95_02200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR95_06185 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR95_21545 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NYR95_18975 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D NYR95_08580 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NYR95_00760 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D NYR95_04935 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D NYR95_06910 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D NYR95_01030 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D NYR95_08420 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D NYR95_20805 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D NYR95_22060 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NYR95_10860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NYR95_05090 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D NYR95_22440 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D NYR95_21580 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:xdy01008]
D NYR95_20725 amino acid adenylation domain-containing protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D NYR95_07600 aminotransferase class V-fold PLP-dependent enzyme K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
C 01006 Prenyltransferases [BR:xdy01006]
D NYR95_14975 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D NYR95_15620 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D NYR95_08615 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NYR95_10130 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NYR95_02235 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D NYR95_20500 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:xdy01007]
D NYR95_15395 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NYR95_05160 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D NYR95_12990 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D NYR95_20585 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NYR95_21045 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NYR95_12770 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NYR95_20690 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NYR95_08455 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NYR95_06960 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NYR95_04230 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NYR95_15085 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NYR95_10835 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NYR95_16655 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NYR95_09530 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D NYR95_10610 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NYR95_22215 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NYR95_22210 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NYR95_09700 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NYR95_18700 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NYR95_14230 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NYR95_10175 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NYR95_14210 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NYR95_14205 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NYR95_18450 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D NYR95_00660 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D NYR95_12550 pyridoxal phosphate-dependent aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D NYR95_09570 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_10630 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_17995 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NYR95_05770 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D NYR95_02220 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NYR95_13615 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D NYR95_18025 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NYR95_13560 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D NYR95_16100 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D NYR95_17980 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D NYR95_05325 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NYR95_09675 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NYR95_01705 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:xdy00194]
D NYR95_19110 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NYR95_19115 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NYR95_19120 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NYR95_19125 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NYR95_19130 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NYR95_19135 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NYR95_19140 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NYR95_19145 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:xdy03000]
D NYR95_16195 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NYR95_02045 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D NYR95_16800 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D NYR95_18130 helix-turn-helix domain-containing protein K07506 K07506; AraC family transcriptional regulator
D NYR95_15240 helix-turn-helix domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D NYR95_15115 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NYR95_05085 LysR substrate-binding domain-containing protein K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D NYR95_05215 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D NYR95_09095 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D NYR95_17430 LysR family transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D NYR95_21915 LysR family transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D NYR95_16695 ampR; LysR family transcriptional regulator AmpR K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D NYR95_08955 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D NYR95_14710 LysR family transcriptional regulator K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator
D NYR95_02075 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D NYR95_00955 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NYR95_04200 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NYR95_09225 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NYR95_12505 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NYR95_17280 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NYR95_22295 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NYR95_22450 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NYR95_13700 LacI family transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D NYR95_09640 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D NYR95_04190 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D NYR95_02085 GntR family transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D NYR95_05070 GntR family transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D NYR95_01450 TetR/AcrR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D NYR95_01890 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D NYR95_13665 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D NYR95_18230 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D NYR95_20815 fabR; HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D NYR95_11770 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
D NYR95_01000 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NYR95_19315 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NYR95_07930 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D NYR95_18650 MarR family winged helix-turn-helix transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D NYR95_22675 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D NYR95_08825 MarR family transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D NYR95_01595 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D NYR95_07860 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D NYR95_09035 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D NYR95_15390 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D NYR95_02140 helix-turn-helix domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D NYR95_02930 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NYR95_10605 helix-turn-helix domain-containing protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D NYR95_07640 short-chain fatty acyl-CoA regulator family protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D NYR95_08515 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D NYR95_12285 mntR; manganese-binding transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D NYR95_17565 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D NYR95_21130 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D NYR95_03120 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D NYR95_06230 prpR; propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D NYR95_11310 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D NYR95_03925 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D NYR95_21330 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D NYR95_20555 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NYR95_18575 metal/formaldehyde-sensitive transcriptional repressor K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D NYR95_12510 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D NYR95_20635 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NYR95_09045 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D NYR95_10255 glycine cleavage system protein R K03567 gcvR; glycine cleavage system transcriptional repressor
D NYR95_05210 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D NYR95_13385 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D NYR95_09510 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D NYR95_15685 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D NYR95_12785 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D NYR95_04490 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D NYR95_04630 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:xdy03021]
D NYR95_05665 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NYR95_05510 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NYR95_05515 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NYR95_17850 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NYR95_16155 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D NYR95_20070 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D NYR95_08080 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D NYR95_08285 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D NYR95_08430 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D NYR95_09855 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D NYR95_16310 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D NYR95_20945 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D NYR95_20255 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D NYR95_08020 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D NYR95_11320 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D NYR95_11135 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D NYR95_14540 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D NYR95_04540 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D NYR95_05485 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D NYR95_13435 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D NYR95_13430 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D NYR95_07050 ATP-binding protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D NYR95_07045 STAS domain-containing protein K17762 rsbS; rsbT antagonist protein RsbS
D NYR95_07040 STAS domain-containing protein K17763 rsbR; rsbT co-antagonist protein RsbR
D NYR95_12785 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D NYR95_10800 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D NYR95_14815 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D NYR95_20290 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:xdy03019]
D NYR95_11935 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D NYR95_15015 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D NYR95_08110 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NYR95_09285 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NYR95_12910 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D NYR95_12275 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D NYR95_20280 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D NYR95_18930 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D NYR95_15205 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NYR95_16480 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NYR95_10055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NYR95_14515 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NYR95_20290 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D NYR95_09055 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NYR95_03195 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NYR95_10135 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D NYR95_05890 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D NYR95_05385 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D NYR95_10380 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D NYR95_02970 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D NYR95_10180 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D NYR95_15175 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D NYR95_08000 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D NYR95_16470 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D NYR95_01655 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:xdy03011]
D NYR95_12430 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D NYR95_08640 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NYR95_05575 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D NYR95_05660 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NYR95_05630 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NYR95_09540 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NYR95_05525 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NYR95_05615 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NYR95_02955 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NYR95_05540 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NYR95_05655 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NYR95_05520 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D NYR95_05650 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NYR95_05610 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D NYR95_14520 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D NYR95_07195 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NYR95_05590 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NYR95_09545 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D NYR95_05565 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NYR95_06945 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NYR95_20460 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NYR95_15260 30S ribosomal protein THX K19033 PSRP4; 30S ribosomal protein S31
D NYR95_05495 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NYR95_05560 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NYR95_05545 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NYR95_05550 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NYR95_05605 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NYR95_05620 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NYR95_09550 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NYR95_05500 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NYR95_05490 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NYR95_05505 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NYR95_02950 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NYR95_05595 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NYR95_05640 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NYR95_05580 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NYR95_05670 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NYR95_05625 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D NYR95_07210 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NYR95_14215 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NYR95_06930 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NYR95_05570 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NYR95_05555 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D NYR95_05600 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NYR95_06935 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NYR95_21940 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NYR95_05585 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NYR95_05635 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D NYR95_17735 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NYR95_06170 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NYR95_21935 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D NYR95_23095 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D NYR95_14220 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D NYR95_12440 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D NYR95_05440 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D NYR95_22575 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR95_20560 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR95_20580 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR95_22595 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR95_22580 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR95_20565 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:xdy03009]
D NYR95_08110 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NYR95_02145 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D NYR95_12275 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D NYR95_08115 era; GTPase Era K03595 era; GTPase
D NYR95_06940 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D NYR95_12785 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D NYR95_14540 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D NYR95_04540 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D NYR95_05485 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D NYR95_19260 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D NYR95_05010 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D NYR95_20130 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D NYR95_19265 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D NYR95_13830 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D NYR95_16105 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D NYR95_21980 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NYR95_04635 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D NYR95_04605 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D NYR95_09295 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D NYR95_10115 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D NYR95_15045 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D NYR95_23030 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D NYR95_15440 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D NYR95_09445 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D NYR95_05130 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D NYR95_11565 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D NYR95_08130 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D NYR95_22775 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NYR95_05760 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D NYR95_12530 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D NYR95_11930 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D NYR95_16990 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D NYR95_01645 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D NYR95_15195 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D NYR95_16500 rRNA pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D NYR95_17320 RNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D NYR95_07340 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D NYR95_18680 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D NYR95_16325 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D NYR95_17145 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D NYR95_07200 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D NYR95_14820 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D NYR95_03140 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D NYR95_14755 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D NYR95_09135 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D NYR95_11935 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D NYR95_15015 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D NYR95_15680 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D NYR95_12925 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D NYR95_15205 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NYR95_18420 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NYR95_11590 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D NYR95_10140 hflX; GTPase HflX K03665 hflX; GTPase
D NYR95_20175 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NYR95_17800 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NYR95_14530 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D NYR95_14545 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D NYR95_15210 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D NYR95_15065 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D NYR95_13490 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D NYR95_10110 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D NYR95_14995 ribosome-associated protein K09889 yjgA; ribosome-associated protein
D NYR95_08015 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D NYR95_05450 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D NYR95_06165 YceD family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:xdy03016]
D NYR95_12910 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D NYR95_04225 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D NYR95_20830 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D NYR95_15395 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NYR95_18700 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NYR95_06960 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NYR95_15085 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NYR95_08455 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NYR95_05160 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D NYR95_20690 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NYR95_10835 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NYR95_16655 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NYR95_10175 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NYR95_09530 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D NYR95_14230 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NYR95_09700 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NYR95_12770 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NYR95_04230 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NYR95_10610 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NYR95_14210 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NYR95_14205 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NYR95_20585 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NYR95_21045 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NYR95_20075 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D NYR95_06120 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NYR95_17240 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D NYR95_14720 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D NYR95_14525 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D NYR95_10075 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D NYR95_20175 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NYR95_10130 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NYR95_23070 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D NYR95_02165 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D NYR95_16090 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D NYR95_23090 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D NYR95_04610 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D NYR95_09305 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D NYR95_17865 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D NYR95_13055 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D NYR95_08355 2'-5' RNA ligase family protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D NYR95_22710 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D NYR95_04475 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D NYR95_22215 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NYR95_22210 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NYR95_12990 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D NYR95_05345 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D NYR95_12280 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D NYR95_21170 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D NYR95_04855 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D NYR95_13470 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D NYR95_07205 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D NYR95_17320 RNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D NYR95_12895 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D NYR95_01295 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D NYR95_01395 pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D NYR95_22775 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NYR95_11475 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D NYR95_22285 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D NYR95_09535 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D NYR95_12100 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D NYR95_13760 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D NYR95_16565 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D NYR95_18935 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D NYR95_16570 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D NYR95_20330 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D NYR95_13035 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D NYR95_13755 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D NYR95_14965 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D NYR95_16380 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D NYR95_20455 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D NYR95_13025 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D NYR95_08895 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D NYR95_09285 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NYR95_14515 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:xdy03012]
D NYR95_14535 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NYR95_14225 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NYR95_16710 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D NYR95_08635 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D NYR95_05470 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NYR95_05535 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NYR95_05530 fusA; elongation factor G K02355 fusA; elongation factor G
D NYR95_05405 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D NYR95_08620 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D NYR95_05230 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D NYR95_05445 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D NYR95_11495 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D NYR95_10725 yeiP; elongation factor P-like protein YeiP K02356 efp; elongation factor P
D NYR95_12875 efp; elongation factor P K02356 efp; elongation factor P
D NYR95_09580 epmA; EF-P lysine aminoacylase EpmA K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D NYR95_12880 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D NYR95_10830 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D NYR95_15965 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D NYR95_01405 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:xdy03110]
D NYR95_11490 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D NYR95_16870 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D NYR95_05980 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D NYR95_03795 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D NYR95_07025 ATP-binding protein K04079 HSP90A; molecular chaperone HtpG
D NYR95_13835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D NYR95_09055 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NYR95_08305 Hsp70 family protein K04046 yegD; hypothetical chaperone protein
D NYR95_03195 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NYR95_09060 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D NYR95_06350 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D NYR95_16000 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D NYR95_09050 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D NYR95_06345 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D NYR95_07220 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D NYR95_03190 co-chaperone GroES K04078 groES; chaperonin GroES
D NYR95_08090 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D NYR95_10120 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NYR95_19145 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NYR95_08645 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D NYR95_08665 molecular chaperone K07346 fimC; fimbrial chaperone protein
D NYR95_01250 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NYR95_19715 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D NYR95_04305 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_05330 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_05335 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_05340 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_19370 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D NYR95_16130 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D NYR95_05710 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D NYR95_06010 peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D NYR95_09200 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D NYR95_11955 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D NYR95_08310 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D NYR95_14925 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D NYR95_05020 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D NYR95_00530 thioredoxin family protein K03671 TXN; thioredoxin
D NYR95_20285 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D NYR95_21445 thioredoxin family protein K03671 TXN; thioredoxin
D NYR95_07080 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D NYR95_15095 trxA; thioredoxin K05838 ybbN; putative thioredoxin
D NYR95_05910 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D NYR95_14480 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D NYR95_18475 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D NYR95_18620 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D NYR95_18625 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D NYR95_05675 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D NYR95_04275 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D NYR95_09820 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D NYR95_12585 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:xdy04131]
D NYR95_11560 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NYR95_17460 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NYR95_17505 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NYR95_15510 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NYR95_17470 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NYR95_07025 ATP-binding protein K04079 HSP90A; molecular chaperone HtpG
D NYR95_13835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:xdy03051]
D NYR95_07025 ATP-binding protein K04079 HSP90A; molecular chaperone HtpG
D NYR95_13835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:xdy03032]
D NYR95_06030 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NYR95_16195 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NYR95_05990 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NYR95_14200 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D NYR95_12425 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NYR95_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NYR95_08940 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NYR95_13260 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NYR95_20475 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NYR95_15615 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR95_08560 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NYR95_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NYR95_04235 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NYR95_15075 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NYR95_06210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NYR95_06035 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR95_06105 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NYR95_08565 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NYR95_21630 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NYR95_09575 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NYR95_03415 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NYR95_13360 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NYR95_15880 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D NYR95_09595 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NYR95_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NYR95_08750 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D NYR95_10030 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D NYR95_00190 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NYR95_20170 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:xdy03036]
D NYR95_16195 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NYR95_08110 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NYR95_17460 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NYR95_18705 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D NYR95_05990 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NYR95_14200 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D NYR95_12425 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NYR95_06350 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D NYR95_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NYR95_16475 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D NYR95_03120 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D NYR95_10135 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D NYR95_01000 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NYR95_19315 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D NYR95_09555 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D NYR95_12520 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D NYR95_12525 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D NYR95_04690 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D NYR95_10060 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D NYR95_20275 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NYR95_04645 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NYR95_11515 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D NYR95_04640 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D NYR95_04685 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D NYR95_04665 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D NYR95_20270 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NYR95_04695 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NYR95_09560 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D NYR95_17925 cell division protein ZapA K09888 zapA; cell division protein ZapA
D NYR95_17920 TIGR02449 family protein K09892 zapB; cell division protein ZapB
D NYR95_01585 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D NYR95_10365 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NYR95_13020 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NYR95_13685 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_15380 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_17375 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_06815 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D NYR95_06810 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D NYR95_06805 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D NYR95_03935 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D NYR95_03940 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D NYR95_03945 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D NYR95_03955 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D NYR95_01095 ParA family protein K03496 parA; chromosome partitioning protein
D NYR95_07475 ParA family protein K03496 parA; chromosome partitioning protein
D NYR95_11045 ParA family protein K03496 parA; chromosome partitioning protein
D NYR95_20630 AAA family ATPase K03496 parA; chromosome partitioning protein
D NYR95_20635 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NYR95_08750 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D NYR95_10030 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D NYR95_02165 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D NYR95_21980 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NYR95_03785 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D NYR95_04270 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D NYR95_14850 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D NYR95_01315 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D NYR95_18610 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:xdy03400]
D NYR95_15245 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D NYR95_08945 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D NYR95_20260 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D NYR95_13995 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D NYR95_09370 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NYR95_17530 S1/P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D NYR95_04725 Nudix family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D NYR95_12250 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D NYR95_20675 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D NYR95_08150 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D NYR95_19415 UdgX family uracil-DNA binding protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D NYR95_06850 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D NYR95_15240 helix-turn-helix domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D NYR95_15695 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D NYR95_22570 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NYR95_03625 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D NYR95_20615 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NYR95_22005 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NYR95_15515 nfi; deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D NYR95_10810 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NYR95_09575 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NYR95_21630 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NYR95_06575 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D NYR95_06925 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D NYR95_14410 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D NYR95_11995 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D NYR95_11070 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NYR95_21895 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NYR95_05510 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NYR95_05515 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NYR95_05665 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NYR95_17850 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NYR95_15450 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NYR95_07235 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D NYR95_13015 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D NYR95_09480 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D NYR95_13040 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NYR95_14970 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NYR95_08560 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NYR95_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NYR95_04235 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NYR95_15075 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NYR95_06210 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NYR95_06035 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NYR95_06105 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NYR95_15615 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR95_03415 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NYR95_13360 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NYR95_16180 vsr; DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D NYR95_22845 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D NYR95_22850 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D NYR95_22840 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D NYR95_10165 recA; recombinase RecA K03553 recA; recombination protein RecA
D NYR95_16625 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NYR95_16610 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NYR95_16630 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NYR95_20225 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D NYR95_07005 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D NYR95_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D NYR95_06455 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NYR95_17745 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NYR95_08120 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D NYR95_06115 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D NYR95_09040 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D NYR95_22280 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D NYR95_14785 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D NYR95_00700 Ku protein K10979 ku; DNA end-binding protein Ku
D NYR95_00705 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D NYR95_09595 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NYR95_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NYR95_00190 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NYR95_20170 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NYR95_05990 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NYR95_03120 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D NYR95_14200 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D NYR95_12425 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NYR95_16480 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NYR95_18705 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D NYR95_18970 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D NYR95_06655 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D NYR95_10160 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D NYR95_06660 imuA; translesion DNA synthesis-associated protein ImuA K14160 imuA; protein ImuA
D NYR95_06665 DNA polymerase Y family protein K14161 imuB; protein ImuB
D NYR95_06670 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D NYR95_10170 recX; recombination regulator RecX K03565 recX; regulatory protein
D NYR95_22545 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D NYR95_16385 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D NYR95_21220 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D NYR95_13415 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D NYR95_21460 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NYR95_21455 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:xdy03029]
D NYR95_13445 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D NYR95_14535 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NYR95_14225 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NYR95_08635 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D NYR95_05470 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NYR95_05535 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NYR95_05530 fusA; elongation factor G K02355 fusA; elongation factor G
D NYR95_08115 era; GTPase Era K03595 era; GTPase
D NYR95_20585 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NYR95_15085 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NYR95_16655 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NYR95_20690 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NYR95_01770 AtzE family amidohydrolase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NYR95_19665 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D NYR95_15615 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NYR95_08595 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D NYR95_09055 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NYR95_09050 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D NYR95_03195 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NYR95_03190 co-chaperone GroES K04078 groES; chaperonin GroES
D NYR95_09060 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D NYR95_14480 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D NYR95_18475 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D NYR95_14850 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D NYR95_20500 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NYR95_20530 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D NYR95_20505 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D NYR95_23085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NYR95_20515 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D NYR95_14760 SCO family protein K07152 SCO1; protein SCO1
D NYR95_19720 SCO family protein K07152 SCO1; protein SCO1
D NYR95_07025 ATP-binding protein K04079 HSP90A; molecular chaperone HtpG
D NYR95_13835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:xdy02000]
D NYR95_12025 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D NYR95_18445 type I secretion system permease/ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NYR95_06750 raxB; peptidase domain-containing ABC transporter RaxB K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NYR95_18340 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NYR95_21210 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NYR95_15150 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D NYR95_08845 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D NYR95_09100 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D NYR95_12650 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D NYR95_12655 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D NYR95_09970 ABC transporter ATP-binding protein/permease K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D NYR95_00225 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D NYR95_12920 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D NYR95_09090 ABC transporter ATP-binding protein/permease K02021 ABC.MR; putative ABC transport system ATP-binding protein
D NYR95_05775 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D NYR95_05780 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D NYR95_05785 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D NYR95_05790 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D NYR95_17540 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D NYR95_17545 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D NYR95_17550 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D NYR95_04915 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D NYR95_16885 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D NYR95_04905 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D NYR95_16880 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D NYR95_04910 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D NYR95_16875 ATP-binding cassette domain-containing protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D NYR95_18355 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D NYR95_13555 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D NYR95_13520 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D NYR95_13525 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D NYR95_13530 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D NYR95_01045 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D NYR95_01040 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D NYR95_17835 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D NYR95_12105 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D NYR95_17815 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D NYR95_17825 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D NYR95_17830 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D NYR95_18725 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NYR95_22895 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NYR95_18715 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NYR95_22890 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NYR95_18720 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NYR95_22885 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NYR95_18730 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component
D NYR95_22900 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D NYR95_22905 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D NYR95_12490 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D NYR95_12485 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D NYR95_12480 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D NYR95_09335 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D NYR95_09340 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D NYR95_09330 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D NYR95_09325 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D NYR95_09320 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NYR95_19205 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D NYR95_19210 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D NYR95_19215 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D NYR95_01025 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D NYR95_18885 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D NYR95_18880 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D NYR95_04250 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D NYR95_04255 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D NYR95_08025 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D NYR95_21315 ABC transporter permease K09696 natB; sodium transport system permease protein
D NYR95_21320 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D NYR95_12055 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D NYR95_12050 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D NYR95_09835 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D NYR95_12570 heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D NYR95_09840 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D NYR95_12565 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C
D NYR95_12560 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D NYR95_12555 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D NYR95_20270 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NYR95_20275 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NYR95_09175 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D NYR95_19390 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D NYR95_19640 DUF3526 domain-containing protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D NYR95_19645 DUF3526 domain-containing protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D NYR95_21420 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D NYR95_09180 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NYR95_19395 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NYR95_19650 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NYR95_21415 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NYR95_04925 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D NYR95_19055 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D NYR95_19060 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D NYR95_20990 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D NYR95_20995 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D NYR95_04930 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NYR95_06310 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NYR95_19050 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NYR95_20985 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NYR95_15780 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D NYR95_20490 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D NYR95_20205 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D NYR95_07215 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D NYR95_10345 sugar porter family MFS transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D NYR95_09230 fucP; L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D NYR95_22120 fucP; L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D NYR95_22700 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D NYR95_00540 proP; glycine betaine/L-proline transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D NYR95_10465 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D NYR95_17775 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter
D NYR95_22380 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D NYR95_02015 MFS transporter K26744 vanK; MFS transporter, AAHS family, vanillate permease
D NYR95_12685 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D NYR95_18320 ABC transporter permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NYR95_20605 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NYR95_22615 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D NYR95_06755 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D NYR95_08340 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D NYR95_15325 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D NYR95_08775 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D NYR95_13545 multidrug efflux MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D NYR95_01820 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D NYR95_09975 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D NYR95_07985 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D NYR95_07990 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D NYR95_13705 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D NYR95_13715 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D NYR95_07995 PTS fructose IIA subunit family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D NYR95_08010 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D NYR95_02065 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D NYR95_07830 ion channel K10716 kch; voltage-gated potassium channel
D NYR95_18030 ion transporter K10716 kch; voltage-gated potassium channel
D NYR95_01165 ammonium transporter K03320 amt; ammonium transporter, Amt family
D NYR95_00380 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_05165 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_05720 glutathione binding-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_08860 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_08925 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_12945 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_13465 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_16910 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_20230 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NYR95_13435 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D NYR95_16305 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D NYR95_17670 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D NYR95_17675 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D NYR95_17265 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D NYR95_02445 DUF3772 domain-containing protein K05802 mscK; potassium-dependent mechanosensitive channel
D NYR95_12270 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D NYR95_07975 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D NYR95_21475 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D NYR95_11055 flagellar motor protein K02556 motA; chemotaxis protein MotA
D NYR95_19335 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D NYR95_11050 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D NYR95_19340 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D NYR95_00045 exbB; TonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D NYR95_12035 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D NYR95_00050 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D NYR95_00055 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D NYR95_00065 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D NYR95_12030 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D NYR95_16600 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D NYR95_16595 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D NYR95_03600 magnesium transporter K03284 corA; magnesium transporter
D NYR95_13510 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D NYR95_11540 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D NYR95_18065 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D NYR95_09150 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NYR95_10000 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NYR95_09345 OprO/OprP family phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D NYR95_18290 porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D NYR95_18370 porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D NYR95_04825 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D NYR95_05750 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D NYR95_00095 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D NYR95_08660 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D NYR95_17225 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase
D NYR95_15805 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D NYR95_16765 TonB-dependent siderophore receptor K16091 fecA; Fe(3+) dicitrate transport protein
D NYR95_16855 btuB; TonB-dependent vitamin B12 receptor K16092 btuB; vitamin B12 transporter
D NYR95_01005 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D NYR95_17645 fhuE; ferric-rhodotorulic acid/ferric-coprogen receptor FhuE K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D NYR95_18465 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D NYR95_04885 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D NYR95_05805 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_14260 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_00665 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_04220 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_04385 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_06255 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_07075 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_08715 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_15270 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_16010 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_16115 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_16715 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_16725 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_16730 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_16900 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_16940 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_17410 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_18015 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_18125 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_18660 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_23055 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NYR95_21960 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D NYR95_18240 TolC family outer membrane protein K12340 tolC; outer membrane protein
D NYR95_08985 efflux transporter outer membrane subunit K18300 oprN; outer membrane protein, multidrug efflux system
D NYR95_15370 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D NYR95_00215 efflux transporter outer membrane subunit K18323 smeC; outer membrane protein, multidrug efflux system
D NYR95_14185 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D NYR95_13720 carbohydrate porin K07267 oprB; porin
D NYR95_17820 carbohydrate porin K07267 oprB; porin
D NYR95_08595 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D NYR95_11585 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D NYR95_16995 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D NYR95_09030 bamE; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D NYR95_22190 autotransporter assembly complex protein TamA K07278 tamA; translocation and assembly module TamA
D NYR95_22185 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB
D NYR95_04300 ESPR-type extended signal peptide-containing protein K21449 ata; trimeric autotransporter adhesin
D NYR95_08030 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D NYR95_08035 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D NYR95_05025 lptD; LPS-assembly protein LptD K04744 lptD; LPS-assembly protein
D NYR95_15080 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D NYR95_04450 cellulose synthase subunit BcsC-related outer membrane protein K20543 bcsC; cellulose synthase operon protein C
D NYR95_13500 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D NYR95_14245 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D NYR95_18395 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D NYR95_03595 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D NYR95_08475 mmuP; S-methylmethionine permease K16235 mmuP; S-methylmethionine transporter
D NYR95_12805 eat; ethanolamine permease K16238 eat; ethanolamine permease
D NYR95_08070 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D NYR95_11920 zupT; zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D NYR95_21950 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D NYR95_13690 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR95_17370 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR95_15375 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR95_08975 efflux RND transporter permease subunit K19585 oqxB; multidrug efflux pump
D NYR95_20345 efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D NYR95_20350 efflux RND transporter permease subunit K07789 mdtC; multidrug efflux pump
D NYR95_02940 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D NYR95_21005 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D NYR95_16080 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D NYR95_18635 betT; choline BCCT transporter BetT K02168 betT; choline/glycine/proline betaine transport protein
D NYR95_22045 cation acetate symporter K14393 actP; cation/acetate symporter
D NYR95_18285 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D NYR95_19400 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D NYR95_21485 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D NYR95_16740 Kef family K(+) transporter K26735 KEA4_5_6; K+:H+ antiporter
D NYR95_15165 cation:proton antiporter K26731 CHX; K+:H+ antiporter
D NYR95_01780 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D NYR95_16925 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D NYR95_22600 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D NYR95_15255 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D NYR95_19690 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D NYR95_03670 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D NYR95_12290 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D NYR95_02775 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D NYR95_02770 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D NYR95_02765 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D NYR95_02760 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D NYR95_02755 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D NYR95_02750 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D NYR95_06950 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D NYR95_01085 AEC family transporter K24180 mleP; malate permease and related proteins
D NYR95_16620 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D NYR95_03280 VUT family protein K09125 yhhQ; queuosine precursor transporter
D NYR95_08495 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D NYR95_04665 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D NYR95_22140 manganese efflux pump MntP family protein K23242 mntP; manganese efflux pump family protein
D NYR95_15540 carbon starvation protein A K23676 btsT; pyruvate/proton symporter
D NYR95_00040 TonB family protein K03832 tonB; periplasmic protein TonB
D NYR95_09690 TonB family protein K03832 tonB; periplasmic protein TonB
D NYR95_11915 energy transducer TonB K03832 tonB; periplasmic protein TonB
D NYR95_15035 energy transducer TonB K03832 tonB; periplasmic protein TonB
D NYR95_16370 energy transducer TonB K03832 tonB; periplasmic protein TonB
D NYR95_21305 energy transducer TonB K03832 tonB; periplasmic protein TonB
D NYR95_16580 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D NYR95_16590 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D NYR95_16585 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D NYR95_18105 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D NYR95_03325 mdcA; malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D NYR95_03330 mdcC; malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit
D NYR95_08770 efflux RND transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D NYR95_13550 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D NYR95_21955 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D NYR95_18440 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D NYR95_06745 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D NYR95_18345 HlyD family secretion protein K13408 cvaA; membrane fusion protein
D NYR95_21215 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D NYR95_13685 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_15380 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_17375 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_08970 efflux RND transporter periplasmic adaptor subunit K19586 oqxA; membrane fusion protein, multidrug efflux system
D NYR95_20340 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D NYR95_00220 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D NYR95_04380 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D NYR95_10745 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D NYR95_10750 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B
D NYR95_10575 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D NYR95_21055 entericidin A/B family lipoprotein K16347 ecnA; entericidin A
D NYR95_21060 entericidin A/B family lipoprotein K16347 ecnA; entericidin A
D NYR95_09825 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D NYR95_12580 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D NYR95_01680 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:xdy02044]
D NYR95_18445 type I secretion system permease/ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D NYR95_18440 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D NYR95_18240 TolC family outer membrane protein K12340 tolC; outer membrane protein
D NYR95_06745 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D NYR95_18345 HlyD family secretion protein K13408 cvaA; membrane fusion protein
D NYR95_21215 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D NYR95_06750 raxB; peptidase domain-containing ABC transporter RaxB K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NYR95_18340 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NYR95_21210 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NYR95_04130 PDZ domain-containing protein K02452 gspC; general secretion pathway protein C
D NYR95_04135 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D NYR95_04360 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D NYR95_04140 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D NYR95_04310 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D NYR95_22220 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D NYR95_04145 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D NYR95_04315 type II secretion system F family protein K02455 gspF; general secretion pathway protein F
D NYR95_04150 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D NYR95_04320 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D NYR95_04155 GspH/FimT family pseudopilin K02457 gspH; general secretion pathway protein H
D NYR95_04325 GspH/FimT family pseudopilin K02457 gspH; general secretion pathway protein H
D NYR95_04160 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D NYR95_04330 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I
D NYR95_04165 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D NYR95_04335 type II secretion system protein J K02459 gspJ; general secretion pathway protein J
D NYR95_04170 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D NYR95_04340 type II secretion system protein GspK K02460 gspK; general secretion pathway protein K
D NYR95_04175 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D NYR95_04345 PilN domain-containing protein K02461 gspL; general secretion pathway protein L
D NYR95_04180 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D NYR95_04350 gspM; type II secretion system protein GspM K02462 gspM; general secretion pathway protein M
D NYR95_04185 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D NYR95_04355 general secretion pathway protein GspN K02463 gspN; general secretion pathway protein N
D NYR95_17100 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D NYR95_17080 pilin K02650 pilA; type IV pilus assembly protein PilA
D NYR95_17090 pilin K02650 pilA; type IV pilus assembly protein PilA
D NYR95_20160 pilin K02650 pilA; type IV pilus assembly protein PilA
D NYR95_17040 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D NYR95_17095 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D NYR95_14425 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D NYR95_11570 tetratricopeptide repeat protein K02656 pilF; type IV pilus assembly protein PilF
D NYR95_16360 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D NYR95_06355 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D NYR95_16355 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D NYR95_16350 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D NYR95_16345 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D NYR95_17715 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D NYR95_17710 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D NYR95_17705 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D NYR95_17700 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D NYR95_17695 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D NYR95_15720 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D NYR95_15715 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D NYR95_18915 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D NYR95_14445 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D NYR95_14440 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D NYR95_14435 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D NYR95_14430 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
D NYR95_06215 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D NYR95_14415 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D NYR95_14450 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D NYR95_14730 ferrous iron transporter B K08086 fimV; pilus assembly protein FimV
D NYR95_15855 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D NYR95_12040 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D NYR95_02295 sctC; type III secretion system outer membrane ring subunit SctC K03219 yscC; type III secretion protein C
D NYR95_02380 serine kinase K03220 yscD; type III secretion protein D
D NYR95_02325 sctJ; type III secretion inner membrane ring lipoprotein SctJ K03222 yscJ; type III secretion protein J
D NYR95_02315 sctL; type III secretion system stator protein SctL K03223 yscL; type III secretion protein L
D NYR95_02310 sctN; type III secretion system ATPase SctN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D NYR95_02360 sctQ; type III secretion system cytoplasmic ring protein SctQ K03225 yscQ; type III secretion protein Q
D NYR95_02365 sctR; type III secretion system export apparatus subunit SctR K03226 yscR; type III secretion protein R
D NYR95_02370 sctS; type III secretion system export apparatus subunit SctS K03227 yscS; type III secretion protein S
D NYR95_02300 sctT; type III secretion system export apparatus subunit SctT K03228 yscT; type III secretion protein T
D NYR95_02340 sctU; type III secretion system export apparatus subunit SctU K03229 yscU; type III secretion protein U
D NYR95_02345 FHIPEP family type III secretion protein K03230 yscV; type III secretion protein V
D NYR95_02335 HrpB1 family type III secretion system apparatus protein K18373 hrpB1; type III secretion protein HrpB1
D NYR95_02330 type III secretion protein HrpB2 K18374 hrpB2; type III secretion inner rod protein HrpB2
D NYR95_02390 serine kinase K18375 hrpE; type III secretion hrp pilus HrpE
D NYR95_02405 serine kinase K18375 hrpE; type III secretion hrp pilus HrpE
D NYR95_02280 lytic transglycosylase domain-containing protein K18377 hpa2; lysozyme-related protein Hpa2
D NYR95_02285 hypothetical protein K18378 hpa1; type III secretion harpin protein Hpa1
D NYR95_02375 4-hydroxyphenylacetate catabolism regulator HpaA K18379 hpaA; type III secretion regulatory protein HpaA
D NYR95_02395 CesT family type III secretion system chaperone K18380 hpaB; type III secretion control protein HpaB
D NYR95_02410 hypothetical protein K18380 hpaB; type III secretion control protein HpaB
D NYR95_02350 sctP; type III secretion system protein SctP K18381 hpaC; type III secretion control protein HpaP
D NYR95_11150 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D NYR95_11155 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D NYR95_11245 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D NYR95_11235 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D NYR95_11230 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D NYR95_11205 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D NYR95_11200 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D NYR95_11195 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D NYR95_11185 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D NYR95_11180 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D NYR95_14360 lytic transglycosylase domain-containing protein K03194 virB1; type IV secretion system protein VirB1
D NYR95_14355 TrbC/VirB2 family protein K03197 virB2; type IV secretion system protein VirB2
D NYR95_14350 VirB3 family type IV secretion system protein K03198 virB3; type IV secretion system protein VirB3
D NYR95_14345 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D NYR95_14340 hypothetical protein K03200 virB5; type IV secretion system protein VirB5
D NYR95_14305 hypothetical protein K03201 virB6; type IV secretion system protein VirB6
D NYR95_14335 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D NYR95_14380 VirB8/TrbF family protein K03203 virB8; type IV secretion system protein VirB8
D NYR95_14375 TrbG/VirB9 family P-type conjugative transfer protein K03204 virB9; type IV secretion system protein VirB9
D NYR95_14370 hypothetical protein K03195 virB10; type IV secretion system protein VirB10
D NYR95_14365 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D NYR95_14390 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D NYR95_04275 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D NYR95_17225 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase
D NYR95_21680 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D NYR95_21685 icmH; type IVB secretion system protein IcmH/DotU K11892 impK; type VI secretion system protein ImpK
D NYR95_21690 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D NYR95_21845 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D NYR95_21850 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG
D NYR95_21855 tssE; type VI secretion system baseplate subunit TssE K11897 impF; type VI secretion system protein ImpF
D NYR95_21870 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D NYR95_21875 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D NYR95_21645 tssA; type VI secretion system protein TssA K11902 impA; type VI secretion system protein ImpA
D NYR95_21865 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D NYR95_21720 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D NYR95_21840 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D NYR95_21675 tagF; type VI secretion system-associated protein TagF K11890 impM; type VI secretion system protein ImpM
D NYR95_21710 tagH; type VI secretion system-associated FHA domain protein TagH K11894 impI; type VI secretion system protein ImpI
D NYR95_21860 virulence protein SciE type K11898 impE; type VI secretion system protein ImpE
D NYR95_08645 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D NYR95_08665 molecular chaperone K07346 fimC; fimbrial chaperone protein
D NYR95_08660 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D NYR95_08655 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D NYR95_08670 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D NYR95_04715 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NYR95_01250 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NYR95_13745 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NYR95_05480 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NYR95_13740 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NYR95_14630 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NYR95_05645 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NYR95_07175 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NYR95_13985 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NYR95_13750 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NYR95_23085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NYR95_22255 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D NYR95_22250 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D NYR95_22245 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:xdy02042]
D NYR95_09150 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NYR95_10000 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NYR95_00370 hemolysin III family protein K11068 hlyIII; hemolysin III
D NYR95_15970 hemolysin III family protein K11068 hlyIII; hemolysin III
D NYR95_05810 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D NYR95_16680 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D NYR95_20760 beta-N-acetylglucosaminidase domain-containing protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 02022 Two-component system [BR:xdy02022]
D NYR95_05895 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NYR95_05900 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D NYR95_21155 sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D NYR95_21160 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D NYR95_15430 creC; two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D NYR95_15435 creB; two-component system response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D NYR95_17570 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D NYR95_17575 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D NYR95_04575 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D NYR95_04580 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D NYR95_18360 sensor histidine kinase N-terminal domain-containing protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D NYR95_18365 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD
D NYR95_18600 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D NYR95_00240 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D NYR95_18595 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D NYR95_20875 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D NYR95_11940 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D NYR95_20975 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D NYR95_20970 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D NYR95_12335 response regulator transcription factor K02479 K02479; two-component system, NarL family, response regulator
D NYR95_03695 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D NYR95_03700 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D NYR95_01170 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D NYR95_01175 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D NYR95_17025 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D NYR95_17035 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D NYR95_01275 sigma-54 dependent transcriptional regulator K02481 flgR; two-component system, NtrC family, response regulator
D NYR95_11025 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_11120 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_15460 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_11030 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NYR95_11130 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NYR95_07095 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NYR95_10900 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NYR95_15485 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NYR95_11415 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D NYR95_16340 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D NYR95_16360 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D NYR95_06355 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D NYR95_16355 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D NYR95_16335 chemotaxis protein K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D NYR95_09795 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D NYR95_10850 ATP-binding protein K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D NYR95_10450 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D NYR95_10445 response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D NYR95_04070 response regulator K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:xdy02035]
D NYR95_11025 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_11120 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_15460 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NYR95_11040 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D NYR95_10930 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D NYR95_13400 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D NYR95_15470 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D NYR95_10905 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D NYR95_07100 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NYR95_10910 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NYR95_15480 SAM-dependent methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NYR95_07095 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NYR95_10900 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NYR95_15485 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NYR95_11030 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NYR95_11130 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NYR95_11125 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D NYR95_11415 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D NYR95_01660 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_01945 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_03660 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_07615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_09770 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10190 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10940 Cache 3/Cache 2 fusion domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10945 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10950 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10955 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10960 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10985 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_10990 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11015 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11020 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_12340 Cache 3/Cache 2 fusion domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_13405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_15465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_16510 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_16970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_18160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D NYR95_11235 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D NYR95_11230 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D NYR95_11225 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D NYR95_11200 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D NYR95_11195 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D NYR95_11185 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D NYR95_11180 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D NYR95_11150 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D NYR95_11155 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D NYR95_11240 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D NYR95_11210 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D NYR95_11205 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D NYR95_11245 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D NYR95_11370 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D NYR95_11420 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D NYR95_11375 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D NYR95_11215 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D NYR95_11250 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D NYR95_11220 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D NYR95_11410 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D NYR95_11405 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D NYR95_11400 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D NYR95_11390 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D NYR95_11380 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D NYR95_11365 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D NYR95_11395 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D NYR95_11360 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D NYR95_11355 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D NYR95_11350 flagellin K02406 fliC; flagellin
D NYR95_11345 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D NYR95_11340 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D NYR95_11135 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D NYR95_11055 flagellar motor protein K02556 motA; chemotaxis protein MotA
D NYR95_19335 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D NYR95_11050 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D NYR95_19340 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D NYR95_11310 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D NYR95_11425 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D NYR95_11145 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D NYR95_11140 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D NYR95_16360 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D NYR95_06355 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D NYR95_16355 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D NYR95_16350 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D NYR95_16345 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D NYR95_16340 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D NYR95_17035 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D NYR95_17025 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D NYR95_15720 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D NYR95_15715 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D NYR95_18915 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D NYR95_16335 chemotaxis protein K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D NYR95_16330 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC
D NYR95_17080 pilin K02650 pilA; type IV pilus assembly protein PilA
D NYR95_17090 pilin K02650 pilA; type IV pilus assembly protein PilA
D NYR95_20160 pilin K02650 pilA; type IV pilus assembly protein PilA
D NYR95_17040 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D NYR95_17095 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D NYR95_17100 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D NYR95_11570 tetratricopeptide repeat protein K02656 pilF; type IV pilus assembly protein PilF
D NYR95_17695 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D NYR95_17700 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D NYR95_17705 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D NYR95_17710 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D NYR95_17715 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D NYR95_06215 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D NYR95_14445 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D NYR95_14440 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D NYR95_14435 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D NYR95_14430 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
D NYR95_14425 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D NYR95_08645 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D NYR95_08665 molecular chaperone K07346 fimC; fimbrial chaperone protein
D NYR95_08660 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D NYR95_08655 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D NYR95_08670 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:xdy04812]
D NYR95_03935 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D NYR95_04695 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NYR95_04690 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D NYR95_06815 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D NYR95_06810 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D NYR95_06805 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D NYR95_01095 ParA family protein K03496 parA; chromosome partitioning protein
D NYR95_07475 ParA family protein K03496 parA; chromosome partitioning protein
D NYR95_11045 ParA family protein K03496 parA; chromosome partitioning protein
D NYR95_20630 AAA family ATPase K03496 parA; chromosome partitioning protein
D NYR95_20635 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:xdy04147]
D NYR95_07025 ATP-binding protein K04079 HSP90A; molecular chaperone HtpG
D NYR95_13835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D NYR95_17460 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NYR95_10055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NYR95_17505 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NYR95_17480 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NYR95_17470 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NYR95_07950 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D NYR95_23015 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D NYR95_03195 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NYR95_09055 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NYR95_10405 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NYR95_21275 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D NYR95_03255 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D NYR95_22355 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D NYR95_12375 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NYR95_05470 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NYR95_05535 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NYR95_06120 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NYR95_20490 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D NYR95_10860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NYR95_01205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_08240 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NYR95_06770 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D NYR95_04795 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D NYR95_18080 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NYR95_12930 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D NYR95_12725 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NYR95_12755 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NYR95_18890 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D NYR95_00655 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NYR95_16120 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D NYR95_16275 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D NYR95_00885 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NYR95_02565 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NYR95_02060 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D NYR95_01155 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_13565 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_13575 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NYR95_21250 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D NYR95_02720 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D NYR95_11910 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D NYR95_14960 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NYR95_00110 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NYR95_10700 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NYR95_03075 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NYR95_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_19170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NYR95_18800 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D NYR95_12110 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NYR95_21490 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NYR95_14635 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NYR95_15510 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NYR95_03730 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
D NYR95_14065 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
D NYR95_20785 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
D NYR95_22400 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:xdy02048]
D NYR95_06460 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D NYR95_06450 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D NYR95_06445 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D NYR95_03415 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NYR95_13360 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NYR95_19810 site-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D NYR95_16195 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NYR95_06440 Mrr restriction system protein K07448 mrr; restriction system protein
D NYR95_11075 type I toxin-antitoxin system SymE family toxin K19048 symE; toxic protein SymE
D NYR95_13855 type I toxin-antitoxin system SymE family toxin K19048 symE; toxic protein SymE
D NYR95_07535 hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D NYR95_01065 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D NYR95_04615 CcdB family protein K19163 ccdB; toxin CcdB
D NYR95_04620 type II toxin-antitoxin system CcdA family antitoxin K19164 ccdA; antitoxin CcdA
D NYR95_06645 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein
D NYR95_22835 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D NYR95_22740 type II toxin-antitoxin system VapC family toxin K07062 fitB; toxin FitB [EC:3.1.-.-]
D NYR95_22735 Arc family DNA-binding protein K21495 fitA; antitoxin FitA
D NYR95_04695 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NYR95_03935 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D NYR95_08750 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D NYR95_10030 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D NYR95_15395 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NYR95_12060 hypothetical protein K19168 cptA; toxin CptA
D NYR95_12065 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:xdy04052]
D NYR95_04015 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:xdy04090]
D NYR95_21275 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D NYR95_06770 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:xdy01504]
D NYR95_22615 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D NYR95_00335 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D NYR95_17560 TonB family protein K02172 blaR1; bla regulator protein blaR1
D NYR95_17565 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D NYR95_16690 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D NYR95_06855 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D NYR95_20395 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NYR95_08375 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D NYR95_21155 sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D NYR95_21160 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D NYR95_13685 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_15380 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_17375 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NYR95_13690 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR95_17370 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR95_15375 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NYR95_15370 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D NYR95_08985 efflux transporter outer membrane subunit K18300 oprN; outer membrane protein, multidrug efflux system
D NYR95_18230 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D NYR95_18240 TolC family outer membrane protein K12340 tolC; outer membrane protein
D NYR95_08955 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:xdy00536]
D NYR95_20760 beta-N-acetylglucosaminidase domain-containing protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
D NYR95_00850 hemagglutinin repeat-containing protein K15125 fhaB; filamentous hemagglutinin
D NYR95_10550 hemagglutinin repeat-containing protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xdy00537]
D NYR95_14960 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NYR95_03615 treA; alpha,alpha-trehalase TreA K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D NYR95_07950 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D NYR95_23015 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D NYR95_20760 beta-N-acetylglucosaminidase domain-containing protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:xdy03100]
D NYR95_13065 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR95_12160 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR95_12175 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR95_20575 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR95_22590 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NYR95_10210 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR95_10215 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR95_10505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR95_05935 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR95_02240 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NYR95_14420 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NYR95_06000 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NYR95_06005 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NYR95_11980 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D NYR95_02960 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NYR95_05430 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NYR95_10375 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NYR95_12165 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NYR95_12180 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NYR95_17220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR95_05460 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR95_11975 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR95_11985 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NYR95_05940 tRNA-His K14226 tRNA-His; tRNA His
D NYR95_20570 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR95_22585 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NYR95_05965 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR95_08785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR95_09280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR95_11970 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR95_12190 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR95_14625 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NYR95_05945 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NYR95_16560 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NYR95_02965 tRNA-Met K14230 tRNA-Met; tRNA Met
D NYR95_20060 tRNA-Ile K14230 tRNA-Met; tRNA Met
D NYR95_14550 tRNA-Met K14230 tRNA-Met; tRNA Met
D NYR95_14060 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D NYR95_05930 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NYR95_12680 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NYR95_14190 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NYR95_06100 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR95_09715 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR95_06045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR95_10185 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NYR95_05465 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NYR95_06975 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NYR95_21115 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NYR95_05475 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NYR95_05455 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D NYR95_05995 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR95_06220 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR95_14405 tRNA-Val K14237 tRNA-Val; tRNA Val
D NYR95_20580 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR95_22595 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NYR95_22580 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR95_20565 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NYR95_22575 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR95_20560 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NYR95_06095 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D NYR95_04610 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D NYR95_09005 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D NYR95_20710 SDR family NAD(P)-dependent oxidoreductase K05886 sdh; serine 3-dehydrogenase (NADP+) [EC:1.1.1.276]
D NYR95_01625 dkgB; 2,5-didehydrogluconate reductase DkgB K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D NYR95_01360 NAD-dependent epimerase/dehydratase family protein K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D NYR95_16890 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D NYR95_22165 PQQ-binding-like beta-propeller repeat protein K05889 pvadh; polyvinyl alcohol dehydrogenase (cytochrome) [EC:1.1.2.6]
D NYR95_20440 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D NYR95_05125 Gfo/Idh/MocA family oxidoreductase K00118 gfo; glucose-fructose oxidoreductase [EC:1.1.99.28]
D NYR95_01075 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D NYR95_05740 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D NYR95_01630 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D NYR95_16425 pqqC; pyrroloquinoline-quinone synthase PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D NYR95_21350 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D NYR95_18745 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D NYR95_08145 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D NYR95_01915 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D NYR95_04750 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D NYR95_05745 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D NYR95_00270 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D NYR95_09705 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D NYR95_05220 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D NYR95_05195 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D NYR95_19325 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D NYR95_21280 glutathione binding-like protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D NYR95_03480 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D NYR95_09670 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D NYR95_12295 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D NYR95_10245 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NYR95_05225 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D NYR95_01600 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D NYR95_15670 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D NYR95_10195 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D NYR95_15535 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D NYR95_15810 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D NYR95_08840 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D NYR95_16435 pqqE; pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D NYR95_01875 SDR family oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D NYR95_10090 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D NYR95_18235 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D NYR95_08390 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D NYR95_08405 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D NYR95_21890 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D NYR95_09420 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D NYR95_20085 GNAT family N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D NYR95_12540 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D NYR95_11500 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D NYR95_06130 DUF3488 and transglutaminase-like domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D NYR95_06890 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D NYR95_01310 3-oxoacyl-ACP synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D NYR95_22150 NdvB protein K18786 E2.4.1.321; cellobionic acid phosphorylase [EC:2.4.1.321]
D NYR95_03350 mdcB; triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D NYR95_04980 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D NYR95_15835 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D NYR95_12260 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D NYR95_03265 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D NYR95_03345 mdcG; malonate decarboxylase holo-[acyl-carrier-protein] synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D NYR95_12935 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D NYR95_02450 phosphoglycerol transferase I K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D NYR95_21665 bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1]
D NYR95_20300 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D NYR95_08005 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D NYR95_18295 PAS-domain containing protein K10819 E2.7.13.3; histidine kinase [EC:2.7.13.3]
D NYR95_10315 beta galactosidase jelly roll domain-containing protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D NYR95_22305 9-O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D NYR95_17450 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D NYR95_00920 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D NYR95_06725 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D NYR95_17315 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D NYR95_06920 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D NYR95_16605 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D NYR95_01100 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D NYR95_20800 EAL domain-containing protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D NYR95_13635 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D NYR95_02020 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D NYR95_01800 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D NYR95_08900 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D NYR95_04445 bcsZ; cellulose synthase complex periplasmic endoglucanase BcsZ K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D NYR95_22360 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D NYR95_22375 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D NYR95_03405 arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D NYR95_07630 arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D NYR95_22300 alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D NYR95_10325 DUF5110 domain-containing protein K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D NYR95_09405 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NYR95_20400 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NYR95_04470 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D NYR95_20140 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D NYR95_07935 proline iminopeptidase-family hydrolase K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101]
D NYR95_18470 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D NYR95_06160 Maf family nucleotide pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D NYR95_00615 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D NYR95_06140 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D NYR95_17690 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D NYR95_22515 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D NYR95_03335 biotin-independent malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D NYR95_03340 mdcE; biotin-independent malonate decarboxylase subunit gamma K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D NYR95_01320 alpha/beta fold hydrolase K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114]
D NYR95_06520 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D NYR95_13030 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D NYR95_18525 polysaccharide lyase family protein K18195 RGL4; rhamnogalacturonan endolyase [EC:4.2.2.23]
D NYR95_22115 L-fucose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D NYR95_09385 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D NYR95_01340 fatty acid CoA ligase family protein K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D NYR95_18075 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D NYR95_08445 rnfB; Rnf electron transport complex subunit RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
C 99981 Carbohydrate metabolism
D NYR95_03590 cellulase family glycosylhydrolase K20628 exlX; expansin
C 99982 Energy metabolism
D NYR95_13605 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D NYR95_10270 ferredoxin family protein K05524 fdxA; ferredoxin
D NYR95_18795 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D NYR95_08465 VOC family protein K08234 yaeR; glyoxylase I family protein
D NYR95_15725 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D NYR95_12735 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D NYR95_12420 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A
D NYR95_12415 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
D NYR95_18805 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
D NYR95_01230 glycosyltransferase family 25 protein K07270 K07270; glycosyl transferase, family 25
D NYR95_04440 bcsB; cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D NYR95_01215 heme biosynthesis protein HemY K02498 hemY; HemY protein
D NYR95_01385 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D NYR95_10155 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D NYR95_01380 SCP2 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D NYR95_20770 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
C 99988 Secondary metabolism
D NYR95_08935 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D NYR95_00320 DoxX family protein K15977 K15977; putative oxidoreductase
D NYR95_12315 DoxX family protein K15977 K15977; putative oxidoreductase
D NYR95_19430 DoxX family protein K15977 K15977; putative oxidoreductase
D NYR95_03690 alpha/beta hydrolase K06999 K06999; phospholipase/carboxylesterase
D NYR95_21470 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D NYR95_08170 cold-shock protein K03704 cspA; cold shock protein
D NYR95_08880 cold-shock protein K03704 cspA; cold shock protein
D NYR95_12950 cold-shock protein K03704 cspA; cold shock protein
D NYR95_12205 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D NYR95_08205 ligase-associated DNA damage response exonuclease K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D NYR95_11485 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D NYR95_05970 tig; trigger factor K03545 tig; trigger factor
D NYR95_09665 msrQ; protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D NYR95_09015 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D NYR95_20775 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D NYR95_21380 DsbA family protein K07396 K07396; putative protein-disulfide isomerase
D NYR95_15530 OsmC family protein K07397 yhfA; putative redox protein
D NYR95_11905 NfuA family Fe-S biogenesis protein K07400 nfuA; Fe/S biogenesis protein NfuA
D NYR95_15585 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D NYR95_14895 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D NYR95_07350 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D NYR95_20685 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D NYR95_22935 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D NYR95_00815 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D NYR95_04595 YraN family protein K07460 yraN; putative endonuclease
D NYR95_07570 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D NYR95_16905 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D NYR95_20150 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D NYR95_11535 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D NYR95_01990 IS5 family transposase K07481 K07481; transposase, IS5 family
D NYR95_02470 IS5 family transposase K07481 K07481; transposase, IS5 family
D NYR95_04515 IS5 family transposase K07481 K07481; transposase, IS5 family
D NYR95_15660 IS5 family transposase K07481 K07481; transposase, IS5 family
D NYR95_18305 IS5 family transposase K07481 K07481; transposase, IS5 family
D NYR95_18850 IS5 family transposase K07481 K07481; transposase, IS5 family
D NYR95_00280 IS110 family transposase K07486 K07486; transposase
D NYR95_05855 IS110 family transposase K07486 K07486; transposase
D NYR95_08065 IS110 family transposase K07486 K07486; transposase
D NYR95_09785 IS110 family transposase K07486 K07486; transposase
D NYR95_11385 IS110 family transposase K07486 K07486; transposase
D NYR95_12390 IS110 family transposase K07486 K07486; transposase
D NYR95_13910 IS110 family transposase K07486 K07486; transposase
D NYR95_15925 IS110 family transposase K07486 K07486; transposase
D NYR95_17660 IS110 family transposase K07486 K07486; transposase
D NYR95_18195 IS110 family transposase K07486 K07486; transposase
D NYR95_21620 IS110 family transposase K07486 K07486; transposase
D NYR95_06370 transposase K07491 rayT; REP-associated tyrosine transposase
D NYR95_03440 IS3 family transposase K07497 K07497; putative transposase
D NYR95_04290 IS3 family transposase K07497 K07497; putative transposase
D NYR95_07320 IS3 family transposase K07497 K07497; putative transposase
D NYR95_09750 IS3 family transposase K07497 K07497; putative transposase
D NYR95_10520 IS3 family transposase K07497 K07497; putative transposase
D NYR95_11860 IS3 family transposase K07497 K07497; putative transposase
D NYR95_12600 IS3 family transposase K07497 K07497; putative transposase
D NYR95_14265 IS3 family transposase K07497 K07497; putative transposase
D NYR95_16190 IS3 family transposase K07497 K07497; putative transposase
D NYR95_16550 IS3 family transposase K07497 K07497; putative transposase
D NYR95_17195 IS3 family transposase K07497 K07497; putative transposase
D NYR95_07395 IS3 family transposase K07497 K07497; putative transposase
D NYR95_09725 IS3 family transposase K07497 K07497; putative transposase
D NYR95_12630 IS3 family transposase K07497 K07497; putative transposase
D NYR95_14310 IS3 family transposase K07497 K07497; putative transposase
D NYR95_22970 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D NYR95_22335 type I restriction endonuclease K07504 K07504; predicted type IV restriction endonuclease
D NYR95_06110 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D NYR95_22155 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D NYR95_07945 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D NYR95_10685 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D NYR95_10690 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D NYR95_22950 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D NYR95_12135 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D NYR95_12140 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D NYR95_18375 CitMHS family transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D NYR95_02705 oligopeptide:H+ symporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D NYR95_08800 oligopeptide:H+ symporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D NYR95_10010 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D NYR95_10430 sodium/sugar symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D NYR95_17655 dicarboxylate/amino acid:cation symporter K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family
D NYR95_17325 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D NYR95_04870 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D NYR95_09905 O-antigen translocase K03328 TC.PST; polysaccharide transporter, PST family
D NYR95_14145 lipopolysaccharide biosynthesis protein K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D NYR95_00120 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D NYR95_03020 ampE; regulatory signaling modulator protein AmpE K03807 ampE; AmpE protein
D NYR95_05705 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D NYR95_13480 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D NYR95_10240 PhoH family protein K07175 phoH2; PhoH-like ATPase
D NYR95_09800 AAA family ATPase K08482 kaiC; circadian clock protein KaiC
D NYR95_19225 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D NYR95_11525 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D NYR95_05420 lolB; lipoprotein insertase outer membrane protein LolB K02494 lolB; outer membrane lipoprotein LolB
D NYR95_00195 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D NYR95_22910 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D NYR95_04035 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D NYR95_07300 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB
D NYR95_08885 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D NYR95_10100 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D NYR95_17515 outer membrane beta-barrel protein K07275 ompW; outer membrane protein
D NYR95_19195 outer membrane beta-barrel protein K07275 ompW; outer membrane protein
D NYR95_03710 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D NYR95_06125 Slp family lipoprotein K07285 slp; outer membrane lipoprotein
D NYR95_15975 AsmA family protein K07290 yhjG; AsmA family protein
D NYR95_16070 NfeD family protein K07340 ybbJ; inner membrane protein
D NYR95_06305 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D NYR95_19045 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D NYR95_15420 creD; cell envelope integrity protein CreD K06143 creD; inner membrane protein
D NYR95_09830 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D NYR95_12575 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D NYR95_09815 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D NYR95_12590 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D NYR95_12595 tetratricopeptide repeat protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D NYR95_14180 GumC family protein K13661 gumC; GumC protein
D NYR95_14170 polysaccharide biosynthesis protein GumE K13662 gumE; putative polymerase
D NYR95_11575 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D NYR95_09315 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D NYR95_02975 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D NYR95_22560 glucan biosynthesis protein D K03670 mdoG; periplasmic glucans biosynthesis protein
D NYR95_23035 TerC family protein K05794 terC; tellurite resistance protein TerC
D NYR95_03180 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D NYR95_16290 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D NYR95_05005 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D NYR95_19010 copper resistance protein B K07233 pcoB; copper resistance protein B
B
B 09194 Poorly characterized
C 99996 General function prediction only
D NYR95_05835 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D NYR95_02795 peptidoglycan DD-metalloendopeptidase family protein K03791 K03791; putative chitinase
D NYR95_19865 glycoside hydrolase family 19 protein K03791 K03791; putative chitinase
D NYR95_03805 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D NYR95_04060 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein
D NYR95_16420 pqqB; pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D NYR95_16430 pqqD; pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D NYR95_00365 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D NYR95_14650 group 1 truncated hemoglobin K06886 glbN; hemoglobin
D NYR95_01010 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D NYR95_20370 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D NYR95_03010 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D NYR95_15775 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D NYR95_15785 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D NYR95_04590 metal-dependent hydrolase K07038 K07038; inner membrane protein
D NYR95_04850 metal-dependent hydrolase K07038 K07038; inner membrane protein
D NYR95_05365 YihY family inner membrane protein K07058 K07058; membrane protein
D NYR95_20470 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D NYR95_12775 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D NYR95_11945 sulfurtransferase K07146 K07146; UPF0176 protein
D NYR95_11470 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D NYR95_04960 LemA family protein K03744 lemA; LemA protein
D NYR95_09210 SlyX family protein K03745 slyX; SlyX protein
D NYR95_20155 DUF494 family protein K03747 smg; Smg protein
D NYR95_20105 PH domain-containing protein K08981 K08981; putative membrane protein
D NYR95_15905 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein
D NYR95_16030 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D NYR95_07840 DUF350 domain-containing protein K08989 K08989; putative membrane protein
D NYR95_22630 YchJ family protein K09858 K09858; SEC-C motif domain protein
D NYR95_08320 zinc ribbon domain-containing protein YjdM K06193 phnA; protein PhnA
C 99997 Function unknown
D NYR95_07390 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D NYR95_21185 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D NYR95_21505 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D NYR95_04970 TPM domain-containing protein K06872 K06872; uncharacterized protein
D NYR95_11705 stress-induced protein K06884 K06884; uncharacterized protein
D NYR95_03275 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D NYR95_20840 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D NYR95_21110 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein
D NYR95_21370 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein
D NYR95_21390 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein
D NYR95_19930 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W
D NYR95_19965 phage late control D family protein K06905 D; Bacteriophage probable baseplate hub protein
D NYR95_19960 phage tail protein K06906 gpU; phage tail protein
D NYR95_19935 phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D NYR95_19940 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D NYR95_01330 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D NYR95_02000 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D NYR95_21085 GTPase K06945 K06945; uncharacterized protein
D NYR95_08180 pdeM; ligase-associated DNA damage response endonuclease PdeM K06953 K06953; uncharacterized protein
D NYR95_08415 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D NYR95_08815 N-acetyltransferase K06975 K06975; uncharacterized protein
D NYR95_01370 GNAT family N-acetyltransferase K06977 K06977; uncharacterized protein
D NYR95_06820 GNAT family N-acetyltransferase K06977 K06977; uncharacterized protein
D NYR95_12690 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D NYR95_03570 MnmC family methyltransferase K06983 K06983; uncharacterized protein
D NYR95_14725 VOC family protein K06996 K06996; uncharacterized protein
D NYR95_01555 ExeM/NucH family extracellular endonuclease K07004 K07004; uncharacterized protein
D NYR95_02695 lamin tail domain-containing protein K07004 K07004; uncharacterized protein
D NYR95_03505 alpha/beta hydrolase-fold protein K07017 K07017; uncharacterized protein
D NYR95_01580 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D NYR95_01130 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D NYR95_11825 amidohydrolase family protein K07045 K07045; uncharacterized protein
D NYR95_20870 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D NYR95_02160 nucleotidyltransferase domain-containing protein K07074 K07074; uncharacterized protein
D NYR95_03890 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D NYR95_22635 TSUP family transporter K07090 K07090; uncharacterized protein
D NYR95_10420 PhoX family protein K07093 K07093; uncharacterized protein
D NYR95_15050 DUF839 domain-containing protein K07093 K07093; uncharacterized protein
D NYR95_00895 metallophosphatase family protein K07095 K07095; uncharacterized protein
D NYR95_14025 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D NYR95_14030 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D NYR95_15765 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein
D NYR95_04600 penicillin-binding protein activator K07121 K07121; uncharacterized protein
D NYR95_00580 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D NYR95_01730 hypothetical protein K07124 K07124; uncharacterized protein
D NYR95_09755 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D NYR95_13670 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D NYR95_14640 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D NYR95_15815 sel1 repeat family protein K07126 K07126; uncharacterized protein
D NYR95_21070 roadblock/LC7 domain-containing protein K07131 K07131; uncharacterized protein
D NYR95_14920 DUF418 domain-containing protein K07148 K07148; uncharacterized protein
D NYR95_18070 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D NYR95_12790 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D NYR95_17950 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D NYR95_20465 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D NYR95_03985 YbeD family protein K09158 K09158; uncharacterized protein
D NYR95_09400 DUF1684 domain-containing protein K09164 K09164; uncharacterized protein
D NYR95_13010 DUF1684 domain-containing protein K09164 K09164; uncharacterized protein
D NYR95_20100 PH domain-containing protein K09167 K09167; uncharacterized protein
D NYR95_08410 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D NYR95_11775 DUF1349 domain-containing protein K09702 K09702; uncharacterized protein
D NYR95_16235 glycoside hydrolase family 125 protein K09704 K09704; uncharacterized protein
D NYR95_14125 cupin domain-containing protein K09705 K09705; uncharacterized protein
D NYR95_12955 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D NYR95_12515 YciI family protein K09780 K09780; uncharacterized protein
D NYR95_02465 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D NYR95_03765 YbaN family protein K09790 K09790; uncharacterized protein
D NYR95_08875 DUF456 domain-containing protein K09793 K09793; uncharacterized protein
D NYR95_21465 DUF475 domain-containing protein K09799 K09799; uncharacterized protein
D NYR95_09025 RnfH family protein K09801 K09801; uncharacterized protein
D NYR95_02900 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D NYR95_15025 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D NYR95_17915 YecA family protein K09895 K09895; uncharacterized protein
D NYR95_21510 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D NYR95_04780 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein
D NYR95_22480 YceH family protein K09915 K09915; uncharacterized protein
D NYR95_11505 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D NYR95_12255 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein
D NYR95_03780 DUF484 family protein K09921 K09921; uncharacterized protein
D NYR95_04900 DMT family protein K09922 K09922; uncharacterized protein
D NYR95_01400 DUF2059 domain-containing protein K09924 K09924; uncharacterized protein
D NYR95_06375 DUF2065 family protein K09937 K09937; uncharacterized protein
D NYR95_15890 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein
D NYR95_15820 PepSY-associated TM helix domain-containing protein K09939 K09939; uncharacterized protein
D NYR95_14985 DUF4870 domain-containing protein K09940 K09940; uncharacterized protein
D NYR95_19245 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein
D NYR95_12385 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein
D NYR95_13860 glycoside hydrolase family 127 protein K09955 K09955; uncharacterized protein
D NYR95_00685 DUF779 domain-containing protein K09959 K09959; uncharacterized protein
D NYR95_13005 TraB/GumN family protein K09973 K09973; uncharacterized protein
D NYR95_15850 HutD family protein K09975 K09975; uncharacterized protein
D NYR95_07820 YjfI family protein K09980 K09980; uncharacterized protein
D NYR95_20965 ThuA domain-containing protein K09992 K09992; uncharacterized protein
D NYR95_00360 ribonuclease H-like domain-containing protein K07502 yprB; uncharacterized protein
D NYR95_10005 DUF47 family protein K07220 K07220; uncharacterized protein
D NYR95_03295 mitochondrial fission ELM1 family protein K07276 K07276; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 2, 2024